Spo20412 (gene) | SpinachBase

Overview


Name	Spo20412
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Vacuolar protein sorting-associated protein 2 homolog 1 (AtVPS2-1) (Charged multivesicular body protein 2 homolog 1) (ESCRT-III complex subunit VPS2 homolog 1) (SNF7-like protein)
Location	chr6 : 29831949 .. 29835531 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTGCGACCTCCGGAATCCAGACAAAGACAAAGGCGTGAAAATTCCTGGTGACATCGTTCCTTCTTGTTGATGATGTATTGTTCTGCCGTGTGGGGTCTTTACTTTCACCATTGCTAAAGTTTATACCTCAACATCATCTTTCCTCTTTCTCTGCGGAATCCCTTCGTTGTTGATCTTGATCTGGTAAACTCTTCAACCAATTTTCCATTTGTTTTTACTTCCAGTTTTAGACTTTTCACTGATATTAGCATACTGCTATTATTCATATCTTCTGGAAACTCAGAATTTTTCGTTGATTTCTATAATTTCTCCATATTTCTTAATTATCTGCTCGTATTTTAATCGGAGAGATTGCTTAATTTTTGTTTTTTCAGCAATTGTTGTTTATTTTTTCGTTGAATTAGATTCGATTAAAATCGTAAACTGCATTGCCCCAATTCAATTGGAACCCTGATCAAACTAATGATTCTTTTTGGAATTTAACTGGAGTTGGTTCAATTGAGCTTTCCAAGTGCCCTAATCAATTGCGGAGTACCCAGATCATTGTATAATTGGTCATCTTTTCTGAAATTTTTAGTTAAGAGAGAGATTGATTGATGGAAAAAGTGAAGAATTTGTTGGGCGTAAAACCGAACCCTCAGCAGTTGCTTAGGGATTGGCAAAGGCGCCTTCGTCAAGAGAGTCGTAATATTGAGCGCCAAATCCGAGGCACGTTTTCACTTTCTCAGTTTGTTAAGCTTCCTGCAGTTGAAAATAATGGGAACTCTATCCTTATGGGTCGATTTTTTTGTTGTTGGAACTTTTAGATATTCAAAGGGAAGAGAAGACTGTACAGAAGGCAATTAGAGAAGCTGCCAAGAGAAATGATATGGGTTCTGCAAAGGTATAATCAATGTCATTGTATTTTGAATGATCAAACCTAGAAGTTTGCTTTTAATTTGATAGTTTCTTTCTTTGTGATTTTTTTTTGTTTTGATTTTGTTAGTTAGACAGTCAAATAGGCAATTGAAATTTGATAATTTTAGTACGATATCTTTGAATTTCTTCCTATCTTCTGTATAACGTATCCAGGCACTTGCGAAGGAAATTGTGATGTCAAGAAAAACTGTCAACCGTCTTTATGAGAATAAAGCTCAACTAAATTCAGTATCGATGCACCTCGGCGAAAGTGTTGGTATGATAATGCCTCTTACATCTTATATAGATTGAGTAGTTTATAAGAGTTCTTCCTAGCATTCTCTTTTGCTGTATGATTGAATTTATGTATCTCCCTTCCTTAACATCTGGGGTTCCGGTGAAAGTAAAGGATCAGACCTTCCCAACTCGAATACTTGATCTATTGTTCTGAAAGGTTGTTTGGGTGATTGACATGCCCATTAATTACATAGCGATAAATTTCTGCCAGGTTCTGTGTGTTTTATACTGTTTCTCTCTCTGGTTCATGGTCCTGCAGCTTTTGTTTTTGTTGTAAGTGTACTAGGGACTTGTTTTGTACTTTGACCCAATGCCCACAAGTATTTACTAGCATATTTCTTTTACATTACATGTTGTGATGCTATCTATCATTCATCACCTGATGAATCTGCTCTGTGGTATCATTTTTTCCTCCTATCTCTCCGCCTACTGAACATAGGTTATGTCATACTCCCTCCGTATTTTTTTAAGAGATACACTTGGCCGGGCACGGGTATTAAGAAGAATAATTGAATGAAATAAAATAATAAAGCAAGTGGGGTTGGATAGATATTTTAATAATTAAATATGTGGGACCATGTCATTTTGGTGGGTGGAGGGTGGGGTGGGTTTATGAAAATATTTGTTTAATAGGATGGTGGGTGATAGGGTATATTAGATGTATTATTTAATTAGATGGTGGGGTTGATAAGTTACTAAAAATAGCAAGTGTATCTCTTAAATAAATACGGCCGGAAAAGGCAAGTGTATCTCTTAAAAAAATACGGAGGGAATATTCTTTTGTTTATTATCTCATCATCTTAGGCTGGTGTAAGAACTAAACAGCCAAGGAAAGTATTCATAAATTAGATGATAACTCCACAGTCAACAGATCTTTGGCATTCTACCTTCCGAACTTCTTTGATTTTTACTACAGTGCACTGTTTTACCCCAGTATAGATGTGAAATACCAAATGAATTGGCCTGAAAAGGAAGATGAAAAACTCATCTCAGCTGTAGTACACAATATTAACGGTAGCAAATAAATTTTGATTCTTGAGTTCTCCCCGCTGCAATGGTTTAGTTCTGACACATAGAATGGCACTTTCACAGGCCAAAGGCTACCATTTTCCATTTCAACATCTACAATTTATGTCTACTATTTATCTTCATTATATGCTCTATGTTGCATCACGGTGTGCCCTAAGTTCTGTTTTTTATTCACATCTTGACTCTAGTATTCCAATTCGGGTCTTATTGCAGCTGTTGCTCGTACAGTGGGCCATTTGCAAAAGAGTGCAGAGGTGATGAAACTTGTCAATAACCTCATCAAAGCTCCACAAATCGCTGTTACAATGCAAGAATTCAGCAAAGAGATGACCAAGGTATTTTTCTAATTTCCAAACAAAAGAGTGCAGAGGGGATGAACTTGTCACTTCAACTTGTTCCCAGTTTTAATACACAGTCAATTGAGCCTGATACATAAAGTTGTGTGCCTTTTTTCTTCTTGTTTATGTGCAAGGTATCATAAGAAATTAGGAATTTGATTTGTTGAGCAAGCCTTAGATGACGTGGACGTAAACTTGTGATATTATTGGGTGCATTACCCGTTGTGTGAAGGGATATATTAATGTTGTTTAATTCATGCATTTTCTTTCATGTTTTAAGGCTGGGATAATTGAAGAGTTTGTTAATGAGGCTGTTGACGGTGCGTTGGATTCTGAAGACATAGAAGAGGAAACAGAGGAAGAGGTTGACAAAGTTTTGACAGAGTTGGCCAGTGAGACTGCTGCACAGCTTCCCGTGGCGGCAAGGAAAGAAAAGATCAAAGCACCTGCACAGAGCACGAGCGTACAGGTGAGCTTGAAATTTCATTCACCTGAGTTTTTAGATCTTTGGTGCACTATCTGAAATTTTGGTTGCTTGGCTTTGTAGGATGAGGAGCCAGTTGCTGAAGGTATAGATGACGAGGAAGAAATGGAGGAAATAAGGGCACGTCTAGCCAAAGTCAGATCATAAAATATCAATCTTGCCAAGAATTGGTACTGTAGACGTGCTTGCATGTAGAGAGATTTGGTTGCAAGGAGACAATGGTAATGTAACCTCCAAATCGTGTAACATTATTTCAGATTACTTGATCTTGGAACCTAATTTCCTTCTCTGGCCTATGCTAACATAATGATAGACAAGCTAATAGGTTCTTCAGATCGATTCATCACATTTTTCAGTGTTTTATACCAAACTTTGATGTAAATAGTATGGAACTCAGCTTTTGCGTAATGAATTCGGTCTTTTGCAAGTTTTCTGCCATATAATGACTATGAAATCTTCCCAAGGGTCTTAGCTCGTGTAAGGCATAATGACGGCTCCTTCCATGCCATTAAACTAATTTTCCATCAAAAAAAA

mRNA sequence

CGATTTGCGACCTCCGGAATCCAGACAAAGACAAAGGCGTGAAAATTCCTGGTGACATCGTTCCTTCTTGTTGATGATGTATTGTTCTGCCGTGTGGGGTCTTTACTTTCACCATTGCTAAAGTTTATACCTCAACATCATCTTTCCTCTTTCTCTGCGGAATCCCTTCGTTGTTGATCTTGATCTGTTAAGAGAGAGATTGATTGATGGAAAAAGTGAAGAATTTGTTGGGCGTAAAACCGAACCCTCAGCAGTTGCTTAGGGATTGGCAAAGGCGCCTTCGTCAAGAGAGTCGTAATATTGAGCGCCAAATCCGAGGCACGGAAGAGAAGACTGTACAGAAGGCAATTAGAGAAGCTGCCAAGAGAAATGATATGGGTTCTGCAAAGGCACTTGCGAAGGAAATTGTGATGTCAAGAAAAACTGTCAACCGTCTTTATGAGAATAAAGCTCAACTAAATTCAGTATCGATGCACCTCGGCGAAAGTGTTGCTGTTGCTCGTACAGTGGGCCATTTGCAAAAGAGTGCAGAGGTGATGAAACTTGTCAATAACCTCATCAAAGCTCCACAAATCGCTGTTACAATGCAAGAATTCAGCAAAGAGATGACCAAGGCTGGGATAATTGAAGAGTTTGTTAATGAGGCTGTTGACGGTGCGTTGGATTCTGAAGACATAGAAGAGGAAACAGAGGAAGAGGTTGACAAAGTTTTGACAGAGTTGGCCAGTGAGACTGCTGCACAGCTTCCCGTGGCGGCAAGGAAAGAAAAGATCAAAGCACCTGCACAGAGCACGAGCGTACAGGATGAGGAGCCAGTTGCTGAAGGTATAGATGACGAGGAAGAAATGGAGGAAATAAGGGCACGTCTAGCCAAAGTCAGATCATAAAATATCAATCTTGCCAAGAATTGGTACTGTAGACGTGCTTGCATGTAGAGAGATTTGGTTGCAAGGAGACAATGGTAATGTAACCTCCAAATCGTGTAACATTATTTCAGATTACTTGATCTTGGAACCTAATTTCCTTCTCTGGCCTATGCTAACATAATGATAGACAAGCTAATAGGTTCTTCAGATCGATTCATCACATTTTTCAGTGTTTTATACCAAACTTTGATGTAAATAGTATGGAACTCAGCTTTTGCGTAATGAATTCGGTCTTTTGCAAGTTTTCTGCCATATAATGACTATGAAATCTTCCCAAGGGTCTTAGCTCGTGTAAGGCATAATGACGGCTCCTTCCATGCCATTAAACTAATTTTCCATCAAAAAAAA

Coding sequence (CDS)

ATGGAAAAAGTGAAGAATTTGTTGGGCGTAAAACCGAACCCTCAGCAGTTGCTTAGGGATTGGCAAAGGCGCCTTCGTCAAGAGAGTCGTAATATTGAGCGCCAAATCCGAGGCACGGAAGAGAAGACTGTACAGAAGGCAATTAGAGAAGCTGCCAAGAGAAATGATATGGGTTCTGCAAAGGCACTTGCGAAGGAAATTGTGATGTCAAGAAAAACTGTCAACCGTCTTTATGAGAATAAAGCTCAACTAAATTCAGTATCGATGCACCTCGGCGAAAGTGTTGCTGTTGCTCGTACAGTGGGCCATTTGCAAAAGAGTGCAGAGGTGATGAAACTTGTCAATAACCTCATCAAAGCTCCACAAATCGCTGTTACAATGCAAGAATTCAGCAAAGAGATGACCAAGGCTGGGATAATTGAAGAGTTTGTTAATGAGGCTGTTGACGGTGCGTTGGATTCTGAAGACATAGAAGAGGAAACAGAGGAAGAGGTTGACAAAGTTTTGACAGAGTTGGCCAGTGAGACTGCTGCACAGCTTCCCGTGGCGGCAAGGAAAGAAAAGATCAAAGCACCTGCACAGAGCACGAGCGTACAGGATGAGGAGCCAGTTGCTGAAGGTATAGATGACGAGGAAGAAATGGAGGAAATAAGGGCACGTCTAGCCAAAGTCAGATCATAA

Protein sequence

MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGTEEKTVQKAIREAAKRNDMGSAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20412.1	Spo20412.1	mRNA

Homology

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BLAST of Spo20412.1 vs. NCBI nr
Match: gi|902147679|gb|KNA05174.1| (hypothetical protein SOVF_192800 [Spinacia oleracea])

HSP 1 Score: 393.3 bits (1009), Expect = 2.900e-106
Identity = 224/228 (98.25%), Postives = 224/228 (98.25%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIR    EEKTVQKAIREAAKRNDMG
Sbjct: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRDIQREEKTVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI
Sbjct: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA
Sbjct: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS
Sbjct: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. NCBI nr
Match: gi|731348247|ref|XP_010685399.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.1 bits (928), Expect = 7.200e-97
Identity = 201/228 (88.16%), Postives = 217/228 (95.18%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           M+KVK+LLG KPNPQQL+RDWQRRLRQE+RNI+RQIR    EEKTVQKAIREAAKRNDMG
Sbjct: 1   MDKVKSLLGQKPNPQQLMRDWQRRLRQETRNIDRQIRDIQREEKTVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIV SRKTVNRLYENKAQLNS+SMHLGESVA+ARTVGHLQKSAEVMKLVNNL+
Sbjct: 61  SAKALAKEIVTSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLQKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQIAVTMQEFSKEMTKAG+IEEFVNE +D ALDSEDIEEETEEEVDKVLTELASETAA
Sbjct: 121 KAPQIAVTMQEFSKEMTKAGVIEEFVNETLDDALDSEDIEEETEEEVDKVLTELASETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLPVAAR+EKIK PAQSTSV+DEEP+AEGID+ +EMEE+R RLAKVRS
Sbjct: 181 QLPVAARREKIKTPAQSTSVEDEEPIAEGIDEVKEMEELRERLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. NCBI nr
Match: gi|359806596|ref|NP_001241270.1| (uncharacterized protein LOC100780989 [Glycine max])

HSP 1 Score: 338.2 bits (866), Expect = 1.100e-89
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKVKN+L  KPNPQQLLRDWQRRLRQ  RNIERQIR    EEK VQKAIREAAKRNDMG
Sbjct: 1   MEKVKNILKPKPNPQQLLRDWQRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V SRKTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNLI
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLI 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP AARKE++K PAQS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAARKERVKQPAQSVGAAEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. NCBI nr
Match: gi|593195127|ref|XP_007132323.1| (hypothetical protein PHAVU_011G085100g [Phaseolus vulgaris])

HSP 1 Score: 334.3 bits (856), Expect = 1.600e-88
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKV N+L  KPNPQQLLRDWQRRLRQE RNIERQIR    EEK VQKAIREAAKRNDMG
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V SRKTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNL+
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP A R+E++K P QS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAVRRERVKQPGQSVGASEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. NCBI nr
Match: gi|950937060|ref|XP_014519912.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Vigna radiata var. radiata])

HSP 1 Score: 334.0 bits (855), Expect = 2.100e-88
Identity = 185/228 (81.14%), Postives = 204/228 (89.47%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKV N+L  KPNPQQLLRDWQRRLRQE RNIERQIR    EEK+VQKAIREAAKRNDMG
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKSVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V S+KTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNL+
Sbjct: 61  SAKALAKELVRSKKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP A RKE++K P QS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERVKQPGQSVGASEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_192800 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.000e-106
Identity = 224/228 (98.25%), Postives = 224/228 (98.25%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIR    EEKTVQKAIREAAKRNDMG
Sbjct: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRDIQREEKTVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI
Sbjct: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA
Sbjct: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS
Sbjct: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EPJ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g170680 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.000e-97
Identity = 201/228 (88.16%), Postives = 217/228 (95.18%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           M+KVK+LLG KPNPQQL+RDWQRRLRQE+RNI+RQIR    EEKTVQKAIREAAKRNDMG
Sbjct: 1   MDKVKSLLGQKPNPQQLMRDWQRRLRQETRNIDRQIRDIQREEKTVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIV SRKTVNRLYENKAQLNS+SMHLGESVA+ARTVGHLQKSAEVMKLVNNL+
Sbjct: 61  SAKALAKEIVTSRKTVNRLYENKAQLNSISMHLGESVAIARTVGHLQKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQIAVTMQEFSKEMTKAG+IEEFVNE +D ALDSEDIEEETEEEVDKVLTELASETAA
Sbjct: 121 KAPQIAVTMQEFSKEMTKAGVIEEFVNETLDDALDSEDIEEETEEEVDKVLTELASETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLPVAAR+EKIK PAQSTSV+DEEP+AEGID+ +EMEE+R RLAKVRS
Sbjct: 181 QLPVAARREKIKTPAQSTSVEDEEPIAEGIDEVKEMEELRERLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Match: C6TD23_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G080000 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 7.800e-90
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKVKN+L  KPNPQQLLRDWQRRLRQ  RNIERQIR    EEK VQKAIREAAKRNDMG
Sbjct: 1   MEKVKNILKPKPNPQQLLRDWQRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V SRKTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNLI
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLI 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP AARKE++K PAQS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAARKERVKQPAQSVGAAEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QIC4_GLYSO (Vacuolar protein sorting-associated protein 24 like 1 OS=Glycine soja GN=glysoja_006544 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 7.800e-90
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKVKN+L  KPNPQQLLRDWQRRLRQ  RNIERQIR    EEK VQKAIREAAKRNDMG
Sbjct: 1   MEKVKNILKPKPNPQQLLRDWQRRLRQGCRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V SRKTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNLI
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLI 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP AARKE++K PAQS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAARKERVKQPAQSVGAAEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Match: V7AFF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G085100g PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.100e-88
Identity = 185/228 (81.14%), Postives = 203/228 (89.04%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           MEKV N+L  KPNPQQLLRDWQRRLRQE RNIERQIR    EEK VQKAIREAAKRNDMG
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKE+V SRKTVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNL+
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAP++AVTMQEFSKEMTKAG+IEE VN+AVD ALDSEDIE+E EEEVDKVLT +A ETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           QLP A R+E++K P QS    +EE +AEG+DDEEEMEEIRARLAKVRS
Sbjct: 181 QLPEAVRRERVKQPGQSVGASEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Match: VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.000e-87
Identity = 180/229 (78.60%), Postives = 205/229 (89.52%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           ME+V N++  KP+P+QLLRDWQR+LRQE RNIERQIR    EE+ VQKAI+EAAKRNDM 
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIV SR+TVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNL+
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQ+A TMQEFSKEMTKAG+IEEFVNEA+D ALDSED+EEE +EEVDKVLT +A ETAA
Sbjct: 121 KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSV-QDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           +LPVA RKE+IK PAQ  S  ++EE VAEG+DDEEE+EEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Match: VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana GN=VPS24-2 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.600e-59
Identity = 129/188 (68.62%), Postives = 158/188 (84.04%), Query Frame = 1


		  
Query: 40  EEKTVQKAIREAAKRNDMGSAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVAR 99
           EE+ V KAI+++ KRND+ +AKALA+EIV SR+TV RLYENKAQ+NS+SMHLGES+A A 
Sbjct: 13  EERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAV 72

Query: 100 TVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEE 159
           TVG+L KS EVMKLVN+L+KAP+IAVTMQ FSKEMTK G+IEEFV++AVD ALDSEDIEE
Sbjct: 73  TVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEE 132

Query: 160 ETEEEVDKVLTELASETAAQLPVAARKEKIKAPAQ-STSVQDEEPVAEGIDDEEEMEEIR 219
           E EEEVDKVLT +A ETAA+LP A RK+K+  PAQ + ++  E+ + EG+D EEE+E IR
Sbjct: 133 EIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIR 192

Query: 220 ARLAKVRS 227
            RLA VRS
Sbjct: 193 YRLANVRS 200

[Close]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Match: CHMP3_DANRE (Charged multivesicular body protein 3 OS=Danio rerio GN=chmp3 PE=2 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 5.600e-33
Identity = 94/223 (42.15%), Postives = 144/223 (64.57%), Query Frame = 1


		  
Query: 14  PQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMGSAKALAKEIVMSR 73
           P+ L+ +W  ++R+E R I+RQIR    EE+ V+++I++AAK+        LAKE++ S+
Sbjct: 12  PKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMIQSK 71

Query: 74  KTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFS 133
           + +N+LY +KAQ+NSV + +   ++V R  G LQKS EVMK + +L+K P+I  TM++ S
Sbjct: 72  RAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMRDLS 131

Query: 134 KEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLPVAARKEKIKA 193
           KEM KAGIIEE + + ++G  D E++EE  E EVDK+L E+   TA  L         KA
Sbjct: 132 KEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEI---TAGALG--------KA 191

Query: 194 PAQSTSVQDEEPVAEGI--------DDEEEMEEIRARLAKVRS 227
           P++ T + D  PVA G         ++EEE+EE+++RLA +RS
Sbjct: 192 PSKVTDLPD--PVAIGATAAPEEESEEEEEIEEMQSRLAALRS 221

[Close]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Match: CHMP3_RAT (Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Chmp3 PE=1 SV=3)

HSP 1 Score: 139.8 bits (351), Expect = 3.600e-32
Identity = 90/218 (41.28%), Postives = 138/218 (63.30%), Query Frame = 1


		  
Query: 14  PQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMGSAKALAKEIVMSR 73
           P++L+ +W  ++R+E R ++RQIR    EE+ V++++++AAK+        LAKE++ SR
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSR 71

Query: 74  KTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFS 133
           K V++LY +KA +NSV M +   +AV R  G LQKS EVMK + +L+K P+I  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLP---VAARKEK 193
           KEM KAGIIEE + +  +   D E++EE  E E+D++L E+ +    + P     A  E 
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEP 191

Query: 194 IKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVRS 227
             A A + S  DEE      DDEE++E +++RLA +RS
Sbjct: 192 EPAGAMAASEGDEE------DDEEDLEAMQSRLATLRS 223

[Close]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Match: CHMP3_XENLA (Charged multivesicular body protein 3 OS=Xenopus laevis GN=chmp3 PE=2 SV=3)

HSP 1 Score: 139.4 bits (350), Expect = 4.800e-32
Identity = 91/220 (41.36%), Postives = 140/220 (63.64%), Query Frame = 1


		  
Query: 14  PQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMGSAKALAKEIVMSR 73
           P+ L+ +W  ++R+E R I+RQIR    E++ V+++I+E+AK+ +  +   LAKE+V S+
Sbjct: 12  PKDLVNEWSLKIRKEMRVIDRQIRDIQREQEKVKRSIKESAKKGNREACVILAKEVVQSK 71

Query: 74  KTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFS 133
           K VN+LY +KA +NSV M +   +AV R  G LQKS EVMK + NL+K P+I  TM+E S
Sbjct: 72  KAVNKLYASKAHMNSVLMSMKNQLAVLRVSGSLQKSTEVMKAMQNLVKLPEIQATMRELS 131

Query: 134 KEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLPVAARKEKIKA 193
           KEM KAGIIEE + +  +G  D +++EE+ E E+D++L E+   TA  L         KA
Sbjct: 132 KEMMKAGIIEEMLEDTFEGMEDQDEMEEQAEMEIDRILFEV---TAGALG--------KA 191

Query: 194 PAQSTSVQDEEPV-----AEGIDDEEEMEEIRARLAKVRS 227
           P++ T    E  +     A   ++EE++E + +RLA +RS
Sbjct: 192 PSKVTDALPEPEITGAMAASDEEEEEDLEAMHSRLAALRS 220

[Close]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Match: AT5G22950.1 (SNF7 family protein)

HSP 1 Score: 322.8 bits (826), Expect = 1.700e-88
Identity = 180/229 (78.60%), Postives = 205/229 (89.52%), Query Frame = 1


		  
Query: 1   MEKVKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMG 60
           ME+V N++  KP+P+QLLRDWQR+LRQE RNIERQIR    EE+ VQKAI+EAAKRNDM 
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLI 120
           SAKALAKEIV SR+TVNRLYENKAQ+NS+SMHLGESVA+ARTVGHL KSAEVMKLVNNL+
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAA 180
           KAPQ+A TMQEFSKEMTKAG+IEEFVNEA+D ALDSED+EEE +EEVDKVLT +A ETAA
Sbjct: 121 KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA 180

Query: 181 QLPVAARKEKIKAPAQSTSV-QDEEPVAEGIDDEEEMEEIRARLAKVRS 227
           +LPVA RKE+IK PAQ  S  ++EE VAEG+DDEEE+EEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Match: AT3G45000.1 (SNF7 family protein)

HSP 1 Score: 230.7 bits (587), Expect = 8.800e-61
Identity = 129/188 (68.62%), Postives = 158/188 (84.04%), Query Frame = 1


		  
Query: 40  EEKTVQKAIREAAKRNDMGSAKALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVAR 99
           EE+ V KAI+++ KRND+ +AKALA+EIV SR+TV RLYENKAQ+NS+SMHLGES+A A 
Sbjct: 13  EERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAV 72

Query: 100 TVGHLQKSAEVMKLVNNLIKAPQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEE 159
           TVG+L KS EVMKLVN+L+KAP+IAVTMQ FSKEMTK G+IEEFV++AVD ALDSEDIEE
Sbjct: 73  TVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSEDIEE 132

Query: 160 ETEEEVDKVLTELASETAAQLPVAARKEKIKAPAQ-STSVQDEEPVAEGIDDEEEMEEIR 219
           E EEEVDKVLT +A ETAA+LP A RK+K+  PAQ + ++  E+ + EG+D EEE+E IR
Sbjct: 133 EIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIR 192

Query: 220 ARLAKVRS 227
            RLA VRS
Sbjct: 193 YRLANVRS 200

[Close]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Match: AT2G06530.1 (SNF7 family protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.700e-17
Identity = 68/226 (30.09%), Postives = 127/226 (56.19%), Query Frame = 1


		  
Query: 4   VKNLLGVKPNPQQLLRDWQRRLRQESRNIERQIRG--TEEKTVQKAIREAAKRNDMGSAK 63
           + ++ G +  P +LLR+ +R L +  R IER+ +G  T+EK +   I++ AK+  MG+ K
Sbjct: 2   MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61

Query: 64  ALAKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKS-AEVMKLVNNLIKA 123
            +AK+++ +R  + + Y+ K+QL  VS+ + +++   + +G   K   + M  +N  +  
Sbjct: 62  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNL 121

Query: 124 PQIAVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQL 183
           P +   MQEF ++  K  ++ E + +A+D AL+ ++ EEETE+ V +VL E+  +   +L
Sbjct: 122 PSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL 181

Query: 184 PVAARKEKIKAPAQSTSVQDEEPVAEGIDDEEEME-EIRARLAKVR 226
            V A    +  PA    V   E  A G +D   ++ +++ARL  +R
Sbjct: 182 -VNAPSGAVAVPAAKNKVVQAE--ATGAEDSGGIDSDLQARLDNLR 223

[Close]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3)

HSP 1 Score: 80.1 bits (196), Expect = 1.900e-15
Identity = 64/222 (28.83%), Postives = 122/222 (54.95%), Query Frame = 1


		  
Query: 6   NLLGVKPNPQQLLRDWQRRLRQESRNIERQIRG--TEEKTVQKAIREAAKRNDMGSAKAL 65
           N+   KPNP+++LR+ +R + Q +R IE++I    +EEK +   I+  AK  + G+ K L
Sbjct: 2   NIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKIL 61

Query: 66  AKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQI 125
           A++++  R+ +  L  ++AQ+  ++ H     A       +Q + + M  ++  +   + 
Sbjct: 62  ARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQ 121

Query: 126 AVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLPVA 185
           A  M+EF K+  +  +  E +++++D ALD+++ E+ETE+  ++VL E+  + A+QL  +
Sbjct: 122 AKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLS-S 181

Query: 186 ARKEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVR 226
           A K KI         + E+  + GID      E+  RLA +R
Sbjct: 182 APKGKIGGK------KAEDVGSSGID------ELEKRLAALR 210

[Close]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Match: AT5G44560.1 (SNF7 family protein)

HSP 1 Score: 72.0 bits (175), Expect = 5.200e-13
Identity = 62/225 (27.56%), Postives = 114/225 (50.67%), Query Frame = 1


		  
Query: 6   NLLGVKPNPQQLLRDWQRRLRQESRNIERQIRGT--EEKTVQKAIREAAKRNDMGSAKAL 65
           N+   K  P+  LR  +R +   +R IER+I     EEK +   I++ AK  +  + K L
Sbjct: 2   NIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKIL 61

Query: 66  AKEIVMSRKTVNRLYENKAQLNSVSMHLGESVAVARTVGHLQKSAEVMKLVNNLIKAPQI 125
           A+++V  R+ +  L  ++AQ+  V+ H     A       ++ + + M  +N  +   + 
Sbjct: 62  ARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQ 121

Query: 126 AVTMQEFSKEMTKAGIIEEFVNEAVDGALDSEDIEEETEEEVDKVLTELASETAAQLPVA 185
           A  +++F K+  +  +  E ++EA+D  LD ++ EEETE+  ++VL E+    A+QL  A
Sbjct: 122 AKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSA 181

Query: 186 AR---KEKIKAPAQSTSVQDEEPVAEGIDDEEEMEEIRARLAKVR 226
            +     K  AP  ST+  ++        +  E++E+  RLA +R
Sbjct: 182 PKGRIATKTAAPPASTAATNKN------SESSEVDELEKRLASLR 220

The following BLAST results are available for this feature:

BLAST of Spo20412.1 vs. NCBI nr
BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
BLAST of Spo20412.1 vs. TAIR (Arabidopsis)

BLAST of Spo20412.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902147679\|gb\|KNA05174.1\|	2.9e-106	98.2	hypothetical protein SOVF_1928...	[more]
gi\|731348247\|ref\|XP_010685399.1\|	7.2e-97	88.1	PREDICTED: vacuolar protein so...	[more]
gi\|359806596\|ref\|NP_001241270.1\|	1.1e-89	82.8	uncharacterized protein LOC100...	[more]
gi\|593195127\|ref\|XP_007132323.1\|	1.6e-88	81.1	hypothetical protein PHAVU_011...	[more]
gi\|950937060\|ref\|XP_014519912.1\|	2.1e-88	81.1	PREDICTED: vacuolar protein so...	[more]

BLAST of Spo20412.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QD27_SPIOL	2.0e-106	98.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8EPJ0_BETVU	5.0e-97	88.1	Uncharacterized protein OS=Bet...	[more]
C6TD23_SOYBN	7.8e-90	82.8	Uncharacterized protein OS=Gly...	[more]
A0A0B2QIC4_GLYSO	7.8e-90	82.8	Vacuolar protein sorting-assoc...	[more]
V7AFF3_PHAVU	1.1e-88	81.1	Uncharacterized protein OS=Pha...	[more]

BLAST of Spo20412.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
VP241_ARATH	3.0e-87	78.6	Vacuolar protein sorting-assoc...	[more]
VP242_ARATH	1.6e-59	68.6	Putative vacuolar protein sort...	[more]
CHMP3_DANRE	5.6e-33	42.1	Charged multivesicular body pr...	[more]
CHMP3_RAT	3.6e-32	41.2	Charged multivesicular body pr...	[more]
CHMP3_XENLA	4.8e-32	41.3	Charged multivesicular body pr...	[more]

BLAST of Spo20412.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G22950.1	1.7e-88	78.6	SNF7 family protein	[more]
AT3G45000.1	8.8e-61	68.6	SNF7 family protein	[more]
AT2G06530.1	2.7e-17	30.0	SNF7 family protein	[more]
AT1G03950.1	1.9e-15	28.8	vacuolar protein sorting-assoc...	[more]
AT5G44560.1	5.2e-13	27.5	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 21..183 score: 2.3
None	No IPR available	unknown	Coil	Coil	coord: 22..42 scor
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 3..226 score: 7.3E
None	No IPR available	PANTHER	PTHR10476:SF10	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED	coord: 3..226 score: 7.3E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0009966	regulation of signal transduction
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005770	late endosome
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005785	signal recognition particle receptor complex
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0016881	acid-amino acid ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005047	signal recognition particle binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22920	0.71	Barchart \| Table
Spo16936	0.71	Barchart \| Table
Spo07181	0.67	Barchart \| Table
Spo11349	0.67	Barchart \| Table
Spo16648	0.66	Barchart \| Table
Spo18475	0.66	Barchart \| Table
Spo14537	0.65	Barchart \| Table
Spo09401	0.65	Barchart \| Table