Spo26875 (gene)

Overview
NameSpo26875
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 32022766 .. 32024109 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCTGCGTTTTCGAATGTCTGCAGCTTTGGGTGGGTATTGTGCTGTTACAGAATCAGTTGAGATGGGTAGACAGATTGTTTGATCATGCAAAATGTGGTAATGTTTCGAAAAATTTTAAAAATTATTCATTGGAGTAGTGTGAGCTTGTATTGTTTTTCATTATTTAAAGCTAATTTATTCAGTGGTAGTGTTGTTTCAAACTAGAAAAATGTATTGTATGTTTGGTAGACAATTCTATGGTATTCATAAAAGCAAAATAATAAAGTTGAGAAAAAAATCTGTTACTTAAATTTCTTCATTGCCTCTTTTGGGTTTTTAGAAGGGGACATTTTAGTCCATTTTTTCACATATATGATGTAACTGGACCACTGCAGGATCAGGTTATTAGCTTATGGAGTCAGGTTAAACATCCAACTTTTAACTAAGCTAAATCACCTTACTCTTACATTTTCTAGTACGGCCAATGAAGTCTTGGCCTAGTGGTTAGGACCGAGGATCTGTGTACGATATATCTCAGATTTTTCCGGCCCATTTAGTTGTAGAAAGTTACAACAATAACTAACGCTTTCTTTTTGGGCCGTCTCCAAAAGATTGGTAAATTTACAAACCTCTTACACTCTACCAACTTAAAGGAGCAGTTGTGTAGACTTTACAGTATTCTGCTCAGAATTTTGCAAATGGCAGCCAGTATTCCAAAAGTGTGGGTTTGTACTTTGTAGGGTGGGCCAGTTGATATCAATTTTCCACAGCCATACGGGGCCTTAACTAGTTCAGAACTTGAATGATTGAAATTTCAGATTTGAGTCATACCCACGTGACAATTGCAAAATTTGGTCCAACGTCCGGCTTCTTGTCGAATCCATAATTATAATTAAATTATGAATCAGATTGAATCTAATCTGATCTTCCATGAGTCATGAGGCCATGAAATTTTTACAAGTACGTACAAATTCTTAGGTCACCCGGGTGTTACAGAGCAAGTTGCAACGTTTTTATGTCCTTTGGTGGCTTGGTGCCCTCTATATATTACGCGAATAATACGAAAGAGTGCACCTAAGATGTGTTGATGATCAAATTTACGAATATAAGACTTAAGGACGACCTCGAGCTAAGTTTCTATCTTTTTTGAGATCAAATCTACAAGTTTCAGTCTCATACTAATGACTGATAGCTATTTTGATGGTTCTCACAAGTCTTGGATGGCACTGCAGATAGGATGCCCGGGCGCCTGACAATGACACGAGCAAGAGAATCTGGTTCGATCTCTGTGTGGATGAAAGCGATCACTCAATCTCCAATGCCAAACCTTCAGGTATTATCCCACGACTTTACCGACTGA

mRNA sequence

ATGCTGCTGCGTTTTCGAATGTCTGCAGCTTTGGGTGGGTATTGTGCTGTTACAGAATCAGTTGAGATGGGTAGACAGATTCTAATTTATTCAGTGGTAGTGTTGTTTCAAACTAGAAAAATGTATTGTATGTTTGGTAGACAATTCTATGATAGGATGCCCGGGCGCCTGACAATGACACGAGCAAGAGAATCTGGTTCGATCTCTGTGTGGATGAAAGCGATCACTCAATCTCCAATGCCAAACCTTCAGGTATTATCCCACGACTTTACCGACTGA

Coding sequence (CDS)

ATGCTGCTGCGTTTTCGAATGTCTGCAGCTTTGGGTGGGTATTGTGCTGTTACAGAATCAGTTGAGATGGGTAGACAGATTCTAATTTATTCAGTGGTAGTGTTGTTTCAAACTAGAAAAATGTATTGTATGTTTGGTAGACAATTCTATGATAGGATGCCCGGGCGCCTGACAATGACACGAGCAAGAGAATCTGGTTCGATCTCTGTGTGGATGAAAGCGATCACTCAATCTCCAATGCCAAACCTTCAGGTATTATCCCACGACTTTACCGACTGA

Protein sequence

MLLRFRMSAALGGYCAVTESVEMGRQILIYSVVVLFQTRKMYCMFGRQFYDRMPGRLTMTRARESGSISVWMKAITQSPMPNLQVLSHDFTD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26875.1Spo26875.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo26875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0046950 cellular ketone body metabolic process
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0010224 response to UV-B
biological_process GO:0006574 valine catabolic process
biological_process GO:0080167 response to karrikin
biological_process GO:0009744 response to sucrose
biological_process GO:0016099 monoterpenoid biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006810 transport
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0019384 caprolactam catabolic process
biological_process GO:0006952 defense response
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0046486 glycerolipid metabolic process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004421 hydroxymethylglutaryl-CoA synthase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0008106 alcohol dehydrogenase (NADP+) activity
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0047501 (+)-neomenthol dehydrogenase activity
molecular_function GO:0047504 (-)-menthol dehydrogenase activity
molecular_function GO:0016866 intramolecular transferase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0042300 beta-amyrin synthase activity
RNA-Seq Expression