Spo14752 (gene) | SpinachBase

Overview


Name	Spo14752
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr6 : 35891796 .. 35894079 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACAACAAAGAAAAGGGTTTAGGGGGAAAAGAAGGTCAAGGAGAGAGAGTAGAATAAATACGTGGTGAAGCATCAGTAGCCTTCTTCCTATCATCTCCACCACCAAAAAGAAAAAGAAAAAAGGAAAAAAAGAACGAGGATTTGGAGGAGAGAGAAACTGCAGAAGGAGACGACACAGTCGCACAGAGGTTCAAGATGAACTAATGGATTTACTGTATCTTTGTACTTCCGCCATTTTTGTTTCGGAGAGAGAAAGCTTCGGCTTTCGGCTGTTTTAGAGAGAGAAAGGAATGTGTGGCATGTAACTGCAGTGAAGGAGAAGCAAAATCTGAGGAAAACCCATTTATTTCCGCCATTTTTAATGGAGAATACAAGTCGGTGAATCATATTTACTGATGCTGATTATGATGATGACGATGATGATGACGATGAATTTATGGAACTATATTAGTTTAACAGAGTGAAAAAAATTAAAAATACACGACGGTTTCATTAATTTATATGCGGAGGATCTATCAAATCGAGTGACTGGAGTGAAGATCGAGTGATATTTTCGATTGAATCTGCTAAAGTAAGTTGCGTTTGATTTTTATTTTAGTTGTTTGTGTTCGGTTTGTTGGTAGGGTTTTATAATCGTTGGAACATATGTTGCTTCATTGAAGTTGTTGGATGATGTATCATTGATGGCGGCGGAAACTAAGAGTGTCGGAGATTCAAATTATTAAGTCAACTCGACCAGATTTAACCCTAATTCGTTGATGATGTTTATGTGGTTTTATTTGAGAAATGAGATTGGTTGTTTCCTTGTATGGATTTGACAAAGTCACTGGTTGAGAGTGGTTGCTATTTTCTGCACTTACTTGAGAATGAGATGAACGTTAATTGTTATTAACTGGCATTTAACCCGCAGAAAGTGTTGATTCGTGTGAATCGGTTTAATCTATGCTGCCTGTGCTTGTTTAAGCAGTCTTGATTTGTATATGAGGGCTGTCAAAATGTCGAAAGACTGTCTGCTGGAGTTAGGTTGAGCAGTGATGTAAAAACATGCTCTTTCATTTTGCCTTATTTATAATCCTGAATAGCATTATTTATCAAGGTGTTGCCTTAATAATGCTGGTATGGAAGTCTGAATGGTCTATGATGTGGAAAGACGTCAAGAGGGTTTCTTTGGGATGGTATATGATGATGTGTTGCTGTTGTTTCGATCTGATAAAATCGGAGTAGTTTCTTCTTCGATCCGTTTTCTAGGTTTTGTGTTTCAATGTCTAGCACACCGTAAAACTTTGGACGTATTGCAGAAAGCAGATCATTATCTGTATGGTGTGGTTGAGTGTATTCATGTTGGACTTGTGTATATTCAGAGTGCTAGTGTTTTCTGCTGCTTGAAAACTATAGTGCAGAAAATGGGTTTGCTCTTACATTTGTTGAAGGAAAGTATTCCGTGTGTTTGTTTAAGTTTCCTTTGTAGTAAACAGCTAGTTCTTTCTAATCGGAACCTGTGTCTTAGGACATTAATATTGTCTATTGTGAGTGAGGTCATGTTGCCTCAGCTGATCTTAAGATATACTGCCGGGCCCACATATTCTGGTGCTTGGTGTTTGTTTCCTTGCGATGATGATGATGGCAACTTTCTATTTTGTAAAAGAGGTTGATGTGCATTTGGGTATTTATATACTGGGTTTTCTCTTGCGTTGTTGGATTTTTTCTCTTTGCAAACCTTTTCGTTAAGTATTCTTACACCAGTTCTGATATTTTGGTCTGTTTGAAAGTTTTGCTGCTTCTTTTGCTTCTGAACTTTTGTTGGTTCTTGCAAAGTTGCAATGGTGGCTTTTTTTATGATATTACAAATATGTTTCATTCCCACAAATGTCTGAACCTAGTAATTTGCTAATTACTGGTTAAGCAACCTAAATGAAGGTGACTGAAAATATCTAAATAGACGGCTATTGCATAATTTGCATGTCTGCAGATATCTTGTCTGTGCACCTGGAAGTTTCTCTTGCTAACTGGACCAAGAACACTTTCTAAACAGGTTTCGTGGATGTGTTTGTTAATGAAATAGTCTTATGTATCTACGCTCATGCAGAGCTATTTTGGGTTGGAACTGACTAGCTTAATTGATTCTGATCCAGCTTGGAAGGTTCTTAAAGGTAGTCAGAGACTCAGAGAGCATCAGGACGTGCAAGAAAAAGAGCTTCAAAAGTTAAAGGATTGTCCTGCACAAGTTCAGAGTTTTTCAACATGCCAGTATCCGACACTGAAAAGGTGTTCTAATTAA

mRNA sequence

ATGGAAAACAACAAAGAAAAGGGTTTAGGGGGAAAAGAAGGTCAAGGAGAGAGAAGCTATTTTGGGTTGGAACTGACTAGCTTAATTGATTCTGATCCAGCTTGGAAGGTTCTTAAAGGTAGTCAGAGACTCAGAGAGCATCAGGACGTGCAAGAAAAAGAGCTTCAAAAGTTAAAGGATTGTCCTGCACAAGTTCAGAGTTTTTCAACATGCCAGTATCCGACACTGAAAAGGTGTTCTAATTAA

Coding sequence (CDS)

ATGGAAAACAACAAAGAAAAGGGTTTAGGGGGAAAAGAAGGTCAAGGAGAGAGAAGCTATTTTGGGTTGGAACTGACTAGCTTAATTGATTCTGATCCAGCTTGGAAGGTTCTTAAAGGTAGTCAGAGACTCAGAGAGCATCAGGACGTGCAAGAAAAAGAGCTTCAAAAGTTAAAGGATTGTCCTGCACAAGTTCAGAGTTTTTCAACATGCCAGTATCCGACACTGAAAAGGTGTTCTAATTAA

Protein sequence

MENNKEKGLGGKEGQGERSYFGLELTSLIDSDPAWKVLKGSQRLREHQDVQEKELQKLKDCPAQVQSFSTCQYPTLKRCSN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14752.1	Spo14752.1	mRNA

Homology

The following BLAST results are available for this feature:

BLAST of Spo14752.1 vs. NCBI nr
BLAST of Spo14752.1 vs. UniProtKB/TrEMBL
BLAST of Spo14752.1 vs. ExPASy Swiss-Prot
BLAST of Spo14752.1 vs. TAIR (Arabidopsis)

BLAST of Spo14752.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo14752.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo14752.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo14752.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0008152	metabolic process
biological_process	GO:0009987	cellular process
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0015079	potassium ion transmembrane transporter activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0004672	protein kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14751	0.72	Barchart \| Table
Spo08465	0.72	Barchart \| Table
Spo12416	0.71	Barchart \| Table
Spo11808	0.70	Barchart \| Table
Spo08644	0.69	Barchart \| Table
Spo18772	0.69	Barchart \| Table
Spo01723	0.68	Barchart \| Table
Spo19453	0.68	Barchart \| Table
Spo01724	0.68	Barchart \| Table
Spo09450	0.68	Barchart \| Table
Spo15875	0.68	Barchart \| Table
Spo16223	0.67	Barchart \| Table
Spo10972	0.67	Barchart \| Table
Spo18115	0.67	Barchart \| Table
Spo19452	0.66	Barchart \| Table
Spo18101	0.66	Barchart \| Table
Spo01722	0.66	Barchart \| Table
Spo19454	0.66	Barchart \| Table
Spo26527	0.65	Barchart \| Table
Spo06125	0.65	Barchart \| Table
Spo11607	0.65	Barchart \| Table
Spo26073	0.65	Barchart \| Table
Spo00500	0.65	Barchart \| Table