Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCAAGTACTTGCAAAGAAGTAAAAAAAATAAGTAAAAAAATAAATAGTATAAATAGTCCAGAAGTCGAAGGATTGGAGAAACAAAGAGCAATAGTACAGCAGCAGCACTAGAAAGGAAATAAGCATAAAACGGAAGTTGCGAGGAAAATAGACGAAAGGTATGGACCCTCAACAGCAACAACAAGCACCTGCGCACCGCCCTCTTCAGCCTCCCGCTGGTGGCGGAGGCGGCGGAAATCCTCTCTCCGGTCTTCTTCCTTTGCTTTTCTTTTTCGTCGCTGCCATCACTGCGGTATTCTCTCTTCAATCATTGTTCACTTTCGTTTCTGTGTGGAATTTTATCGATCACATTCTGTGCATTCCACTTCGAGATTCATTTTACTTCACTTTTAATATGTTGAACTTACTAAATTTGGGCTTATTTTGATTTCATTTCGCCATTTCTAGGTTTTTCATCCTTCAATTGAGGGATCAAATCATGACTTTCTAATCATGAATAATATAATTTTCCATATTTTGTGAATTTACTTTTCGTCGTTGATATTCAATTTTGAGGATTCTTTTCCGAATATACTTTGCGTAATACAATTGTCCAGAAATGGAAGGGAAATCGAGTTTAGATGTTGATGTGATTTTTGAGGCAATTGCACCAAAATTAATGTCTCTTGATCCTTTTTCGAGTAAGAAAATGAGAAATTCATCGCTATGTCTAGAGTCGTTGGTGCTAAACTACTAAGGTGAAAAGACAGGACGTATTCTGACAAAATTCTATTGATTCTAGGACTATGACGAGTAATATACATTCGCAAATTTTTGATGTATTACCTGAACACCCATTGTGGGTTTTAGGTAGGAATAATTAAGGAGAGAGAGTGGTAACCAAGGCGGCTTGATCAGTGGTACCAAGTCCTGATCCCTGGATCAAGAGGTTAGAGTTTACACTCTCGACCACTAGTCCACAGGATAGCTGGTAGCTAGGAATATGATAGTATTGAAAAATATCATAGCTGTCTTGTGTGGTTTATGTTTAATTTTTGGAGTAGTTCTGATGTGCGTAGTCATGTTTGTTTGGATTGTAATTTGTATGATATGCTGTGAACACTTGGACAGGTTATGCTTTCTTCGGCGTCCACAAGCAAGATCAGCTTGACCGTCTTGCATCAAGTTCCTGAAGGTCATGTTGGTGTCTACTGGAGAGGGGGTGCCCTTCTCAAAACAATCACTGATCCTGGTGGGATTTTAGTCTGTTGTCACCTTTGATTGTATGTTTTGTGTATAATGTCTGACTTTTAGGACCTTTCAGGTTTTCACTGGAAGCTTCCTATTGTTACTCATTATGAACCTATACAAGTGACTCTTCAGACTGATCAGGTAGTTCCATGAGTCCTTGTTGGTTTTATAACTTTTTTGATTGATCAACTAAAATCTGTTTATTCTAATCTTTGATGACAAAAGATGCCAAACAAGAAACTATACCGTATTTACCTTTAAAACTCGTATTCTGTAGGTTAGAAACATTCCATGTGGCACAAAAGGGGGTGTTATGATCAACTTCAACAGGATAGAGGTACGCTAACTTGGAGGCGCTTTACATGAGTAGCACAACTCAATATCAAATTGTTATTGATGCTGGTTTTTTCTTTTTCTAGCTGAGTTGTACTTCTGTATGTAACATACTTCAATATCATGTTCAGGTTGTCAACAGGCTGAACAAGGACTTTGTATATGATACACTTCTGAATTACGGCGTGCACTATGATAAGACATGGATATATGACAAAATTCATCACGAGATCAATCAATTCTGCAGCTCCCATGCTCTTCAACAAGTTTATATTGATATGTTTGATCAGGTGAGCAACAACATTTTTAAGTTCTAGTGTAATATAATACTAGTTACTATTTTGTTAATTTTGAAACAAGCTGTTCTCCTTCAGTAATGATTTAGGAGGTGGGCTTTGTCTCTCTGTTCCCTTCTCTTGCTGTGTTGCTAATAAGCTTCCCTTTGTAAGTGGAATTCTTGTTTTCTTTCCAATCTATATACGACAACAAGAATGGCGATGCATTATGGATATTGCCGATGAGGCGATGATAGGATCCTTGAATGTCCATATTTACATGAACTTGCCCTTAAGTCCTTAACCAACTGGAACCTGTAGAGAGGATTTATTTCGGGGCCACGTGAACTAAATGGGTGGAAAATGTTACTTGAAGGATATAATCGTGAAGTTTTTCCTAAAGAACAAAAGAATAGTAGAGGGGTGCAGTAACAAAACTAGTAGAATGCTTCAGTTGAGGAAACAGAGTAAACACAGAACATACACGACTTATTCTTTTATTTTTTTTTGGGGGTGGGGTGGGGTGGTCACCCACCTTCTAAGATCCTAGACTCAAGCTTCAGAAACGTACTCCTGACTTGGGGTTACAATATCACAAGTGCCACAGTTTTCTAGTATCATGTAAACCGTATGCTTTAGATGTGCTAATTCTAGACTCATAACTTCTCTCTTGGTTGGCTTGTTCTTATTCCAAAGTTCTCTCTGTTTCCTCGTGATTTTGTCAAGTCTTCTTCATTGTTGAAGGTCTAATTTCAACTGTTTTTACATATAATACTTTTTGTATACTTACAAATTCAGTGGTAAATCTTCATTTTGTTTCTGGCCCTGTACTGCTCGAGTAACCATTTTTTTAATGTTCTGTCGTCGTACCTCCATACAGATTGATGAAAGGATGAAAGATGCTCTCCAGGGAGACTGCACTCGTTATGCCCCAGGTGTTGAGATTATCAGTGTTCGTGTCACAAAACCTACCATCCCGGAGACTATAAGGCAGAATTATGAACAGATGGAGGAGGAAAGGACAAAGGTACAACAGCAGGATATCTGTTTCTGACTTCATCTACCTATGCTTTTTTCTTTTATCTTTGGGATAGGGGAAACAAATTGGCGGTCCATCTGTATGCGGATTCATTTATACACAGATTCTATTGTAGTTTCGTCTCTCGCTTACTAGTCAAGAATCAAGATTGCACAGGCTTGCATTTGTACTTCTTTTGACTGTTCCTCCACCTTTCCCCTATAAATTTAACTTTAGAGAATGGCCTTTATTTGTTGTAATTTTTTTTAGTTCATTTCATCTTAATTCTTGCTTTTTTGTAGATATTTCACATTTTTATTTTTACTGTGTTTCATGACCTTTTAACTGCTCTTTCTCAGGCTTTAATAGCTATTGAGAAGCAGAAGGTTGCTGAGAAGGAGGCAGAGACACAGAAAAAGATTGCGATATCTGAGGCAGAAAAGAATTCATTTGTGAGCAAAATCATCATGGAACAGAAGCTGATGGAAAAGGAAAGTGCCAGAAGGCAGCAACAAATTGATAATGAGATGAATGTAGCTCGAGAAAAGAGCATGGCTGATTCCTACTACTACAGGTGAATCACTACTCCTCGAATCCCGTCCAACATACCCCACTGGCGGGGGAGTGTTGTTCGCATGTCACTAATGTTAATGTTGAAATGTTGATGTCTGTTTTTCCAGATTAATAAAAGAAGCTGAAGCTAACACTATGAAGCTAACACCCCAGTATCTTGAGCTCAGATTCATTGAAGCAATAGCAAATGATACCAAAATATATTTCGGAGATAAGGTAGTCTAACCATACCAACTAAAGAGCACTTTTATTGCCTTCATTATCTATGAAATTTTTACTCAGTTGTTTGCTCTGCAGATTCCAAATATGGTTTTCGACCAGAAACTTCTTGGGCACTACCTGGAACGCGTGGCCAAAACGCCAGGCAAAGCAGATTTTTGAGCTAATGGATGACTGAGTACTCGGATGTAGTTGTGCAATGGCTGAGACTTTCGGCAAAATGGATCATCAGATTAAGTATACTCGTAGCAGAGTAATGGATCTCTAGTTTCTGGATTGATTAGGTCACGTGCGAACCTAGCACTTTATTTGGAATGTTCTTTTGTTCTTTGTTTGAATGTTATTTTCTCAGGGGTGGTTATAAACAGTTTCAAATGA GCCAAGTACTTGCAAAGAAGTAAAAAAAATAAGTAAAAAAATAAATAGTATAAATAGTCCAGAAGTCGAAGGATTGGAGAAACAAAGAGCAATAGTACAGCAGCAGCACTAGAAAGGAAATAAGCATAAAACGGAAGTTGCGAGGAAAATAGACGAAAGGTATGGACCCTCAACAGCAACAACAAGCACCTGCGCACCGCCCTCTTCAGCCTCCCGCTGGTGGCGGAGGCGGCGGAAATCCTCTCTCCGGTCTTCTTCCTTTGCTTTTCTTTTTCGTCGCTGCCATCACTGCGGTTATGCTTTCTTCGGCGTCCACAAGCAAGATCAGCTTGACCGTCTTGCATCAAGTTCCTGAAGGTCATGTTGGTGTCTACTGGAGAGGGGGTGCCCTTCTCAAAACAATCACTGATCCTGGTTTTCACTGGAAGCTTCCTATTGTTACTCATTATGAACCTATACAAGTGACTCTTCAGACTGATCAGGTTAGAAACATTCCATGTGGCACAAAAGGGGGTGTTATGATCAACTTCAACAGGATAGAGGTTGTCAACAGGCTGAACAAGGACTTTGTATATGATACACTTCTGAATTACGGCGTGCACTATGATAAGACATGGATATATGACAAAATTCATCACGAGATCAATCAATTCTGCAGCTCCCATGCTCTTCAACAAGTTTATATTGATATGTTTGATCAGATTGATGAAAGGATGAAAGATGCTCTCCAGGGAGACTGCACTCGTTATGCCCCAGGTGTTGAGATTATCAGTGTTCGTGTCACAAAACCTACCATCCCGGAGACTATAAGGCAGAATTATGAACAGATGGAGGAGGAAAGGACAAAGGCTTTAATAGCTATTGAGAAGCAGAAGGTTGCTGAGAAGGAGGCAGAGACACAGAAAAAGATTGCGATATCTGAGGCAGAAAAGAATTCATTTGTGAGCAAAATCATCATGGAACAGAAGCTGATGGAAAAGGAAAGTGCCAGAAGGCAGCAACAAATTGATAATGAGATGAATGTAGCTCGAGAAAAGAGCATGGCTGATTCCTACTACTACAGATTAATAAAAGAAGCTGAAGCTAACACTATGAAGCTAACACCCCAGTATCTTGAGCTCAGATTCATTGAAGCAATAGCAAATGATACCAAAATATATTTCGGAGATAAGATTCCAAATATGGTTTTCGACCAGAAACTTCTTGGGCACTACCTGGAACGCAGTAATGGATCTCTAGTTTCTGGATTGATTAGGTCACGTGCGAACCTAGCACTTTATTTGGAATGTTCTTTTGTTCTTTGTTTGAATGTTATTTTCTCAGGGGTGGTTATAAACAGTTTCAAATGA ATGGACCCTCAACAGCAACAACAAGCACCTGCGCACCGCCCTCTTCAGCCTCCCGCTGGTGGCGGAGGCGGCGGAAATCCTCTCTCCGGTCTTCTTCCTTTGCTTTTCTTTTTCGTCGCTGCCATCACTGCGGTTATGCTTTCTTCGGCGTCCACAAGCAAGATCAGCTTGACCGTCTTGCATCAAGTTCCTGAAGGTCATGTTGGTGTCTACTGGAGAGGGGGTGCCCTTCTCAAAACAATCACTGATCCTGGTTTTCACTGGAAGCTTCCTATTGTTACTCATTATGAACCTATACAAGTGACTCTTCAGACTGATCAGGTTAGAAACATTCCATGTGGCACAAAAGGGGGTGTTATGATCAACTTCAACAGGATAGAGGTTGTCAACAGGCTGAACAAGGACTTTGTATATGATACACTTCTGAATTACGGCGTGCACTATGATAAGACATGGATATATGACAAAATTCATCACGAGATCAATCAATTCTGCAGCTCCCATGCTCTTCAACAAGTTTATATTGATATGTTTGATCAGATTGATGAAAGGATGAAAGATGCTCTCCAGGGAGACTGCACTCGTTATGCCCCAGGTGTTGAGATTATCAGTGTTCGTGTCACAAAACCTACCATCCCGGAGACTATAAGGCAGAATTATGAACAGATGGAGGAGGAAAGGACAAAGGCTTTAATAGCTATTGAGAAGCAGAAGGTTGCTGAGAAGGAGGCAGAGACACAGAAAAAGATTGCGATATCTGAGGCAGAAAAGAATTCATTTGTGAGCAAAATCATCATGGAACAGAAGCTGATGGAAAAGGAAAGTGCCAGAAGGCAGCAACAAATTGATAATGAGATGAATGTAGCTCGAGAAAAGAGCATGGCTGATTCCTACTACTACAGATTAATAAAAGAAGCTGAAGCTAACACTATGAAGCTAACACCCCAGTATCTTGAGCTCAGATTCATTGAAGCAATAGCAAATGATACCAAAATATATTTCGGAGATAAGATTCCAAATATGGTTTTCGACCAGAAACTTCTTGGGCACTACCTGGAACGCAGTAATGGATCTCTAGTTTCTGGATTGATTAGGTCACGTGCGAACCTAGCACTTTATTTGGAATGTTCTTTTGTTCTTTGTTTGAATGTTATTTTCTCAGGGGTGGTTATAAACAGTTTCAAATGA MDPQQQQQAPAHRPLQPPAGGGGGGNPLSGLLPLLFFFVAAITAVMLSSASTSKISLTVLHQVPEGHVGVYWRGGALLKTITDPGFHWKLPIVTHYEPIQVTLQTDQVRNIPCGTKGGVMINFNRIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSSHALQQVYIDMFDQIDERMKDALQGDCTRYAPGVEIISVRVTKPTIPETIRQNYEQMEEERTKALIAIEKQKVAEKEAETQKKIAISEAEKNSFVSKIIMEQKLMEKESARRQQQIDNEMNVAREKSMADSYYYRLIKEAEANTMKLTPQYLELRFIEAIANDTKIYFGDKIPNMVFDQKLLGHYLERSNGSLVSGLIRSRANLALYLECSFVLCLNVIFSGVVINSFK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo10371.1 vs. NCBI nr
Match: gi|902236277|gb|KNA24307.1| (hypothetical protein SOVF_016670 [Spinacia oleracea]) HSP 1 Score: 697.6 bits (1799), Expect = 1.300e-197 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1
BLAST of Spo10371.1 vs. NCBI nr
Match: gi|731339161|ref|XP_010680704.1| (PREDICTED: erlin-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 616.3 bits (1588), Expect = 3.700e-173 Identity = 314/353 (88.95%), Postives = 334/353 (94.62%), Query Frame = 1
BLAST of Spo10371.1 vs. NCBI nr
Match: gi|747058526|ref|XP_011075603.1| (PREDICTED: erlin-1 [Sesamum indicum]) HSP 1 Score: 530.8 bits (1366), Expect = 2.000e-147 Identity = 267/353 (75.64%), Postives = 315/353 (89.24%), Query Frame = 1
BLAST of Spo10371.1 vs. NCBI nr
Match: gi|629122005|gb|KCW86495.1| (hypothetical protein EUGRSUZ_B03154 [Eucalyptus grandis]) HSP 1 Score: 521.2 bits (1341), Expect = 1.600e-144 Identity = 262/353 (74.22%), Postives = 309/353 (87.54%), Query Frame = 1
BLAST of Spo10371.1 vs. NCBI nr
Match: gi|702276051|ref|XP_010044417.1| (PREDICTED: erlin-2-B [Eucalyptus grandis]) HSP 1 Score: 519.6 bits (1337), Expect = 4.700e-144 Identity = 261/351 (74.36%), Postives = 308/351 (87.75%), Query Frame = 1
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZL4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016670 PE=4 SV=1) HSP 1 Score: 697.6 bits (1799), Expect = 8.800e-198 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAA0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g136580 PE=4 SV=1) HSP 1 Score: 616.3 bits (1588), Expect = 2.600e-173 Identity = 314/353 (88.95%), Postives = 334/353 (94.62%), Query Frame = 1
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Match: A0A059D8H1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03154 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 1.100e-144 Identity = 262/353 (74.22%), Postives = 309/353 (87.54%), Query Frame = 1
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Match: M5XEJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007348mg PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 2.100e-143 Identity = 262/356 (73.60%), Postives = 316/356 (88.76%), Query Frame = 1
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Match: D7T9W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00540 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 6.200e-143 Identity = 255/354 (72.03%), Postives = 314/354 (88.70%), Query Frame = 1
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Match: ERLN2_BOVIN (Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 5.700e-89 Identity = 174/307 (56.68%), Postives = 229/307 (74.59%), Query Frame = 1
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.300e-88 Identity = 172/306 (56.21%), Postives = 226/306 (73.86%), Query Frame = 1
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.600e-88 Identity = 172/306 (56.21%), Postives = 226/306 (73.86%), Query Frame = 1
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Match: ERLN2_HUMAN (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.600e-88 Identity = 172/306 (56.21%), Postives = 226/306 (73.86%), Query Frame = 1
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-b PE=2 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.200e-88 Identity = 173/311 (55.63%), Postives = 226/311 (72.67%), Query Frame = 1
BLAST of Spo10371.1 vs. TAIR (Arabidopsis)
Match: AT2G03510.1 (SPFH/Band 7/PHB domain-containing membrane-associated protein family) HSP 1 Score: 477.6 bits (1228), Expect = 7.200e-135 Identity = 243/355 (68.45%), Postives = 299/355 (84.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10371.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10371.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10371.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10371.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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