Spo13824.1 (mRNA) | SpinachBase

Overview


Name	Spo13824.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	SpoScf_00818 : 7087 .. 11976 (+)
Sequence length	1223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGTAGGTTAGATATGGTTAATAAGACATGGTTGTACAATTCAAAGGTGTTGTATTAACCTTGGGGAAGTTTGTTAATATAGTTAAGCTTGCACTGTTAGGATAACGAAATTTACTTTTAAGACAGGGGTCTTAGTAGCGATACAACTTTATTGTTTATGAATTATACAATAAATTAATAGCTTATCTATGTATATTATTATTCTTTGATATCAACAGTATTTTACCAGCAGTCTGCACCGAGTCACATGACCACATATCATAAGCTAGCCAGCAATTTCGATCCGGGGATAAAGATCGTAGTTACGTAGTACGTAGTACTTCTTTAAGAATTTGTTATAAGGGTCAATTATTCTTCGTATATGACAAGTGACAATTGCTAGTGACAATATTAAATATTTTGGTTGAAAATAATGAAACTTAATTACTACTCCAAAATAGATGCGCGTTTATATGTGGTGATCAACCTTGACTCCATCACTACAATAAATTGTACTATTAACGACGGGAAATCCCGTCGCGAAAGGCCAATAACGTTGATTAACGACGGGATTTCCTGTCGCGAACACGTCATAAAAGGGGCCGTCGTTAATAGAAAATCCCGTCGTAAAAGACATTTGCGACGGTTATTCCCGTCATTGTTTGGTTGTTAGCCCCGTCGCAAAAGGCTTTTACGACGGATTTTTTAACCCGTCATAATTAGGTTGTCGTTAAAGATACAAATTCTTGTAGTGCATATTAATTAAATTTGTTAAACCCGGACAGCTAGTCCATAATAAATTTGAAAGTTCAAAATTTTAATTTTTTTTTTCTGGCTAGTGATATACTCGTAAGTTTTTAGGACAATAATATAATGATCTAAAGCCTATTCAAGTCCAAAAGTGATGGGCGACGACCTTGGACTACGCCCAACCTGACCCTTTTGCCTAAAAACGGACCTCTTTTTTGTTTAATTTCCAGCTGGGTCGTATATTACCTCTCCAAATATTGTCTCCCATAATCAGCGACGGATCCAGGTGTTTGGGTGTGGTGTGTCACGACCCGCCAAAAACCTAATACAATAATGCCACAATGACTAGTGCATGATTATAAAAACACAAATTCTTATTTATAAGGGTTGTACAATAATTATTGTACACCAGAGTAAAAGCACTACAAAAAGCTGGGCCATCAACGACAACCCATTTATGACAGGCCCAAAACCCGTCGTTGATGGCATAGTTTTTACGACGGGAAAGTTAAACCGTCATAACCCACCCACGAAAATTAAACCCAGTCTCTCTTATTTTCCCTCCTCCTTCATTTTGCTCCATCAAACAAGAGGGGAAGCCGACAAAGTTCTCAAAGCTTCAAAAAACAAACAAAGGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAGTTTAATTAAGCCAATACAGCTGCAAGTTAGAGAATATTTGAGTAAATATTGAAGGATGCAAGTTAGGTTTCCTCCAAATTGAAGATTCGAATATTGTTGCTTGCAGATTCGTATTATCAGGTATATAATTTCACTCTTTTATTATCCTTTTTAGTTGCTTTAATTTGATTTGTTGCTTCAATTTGATTTGTTGAGTATGATGCGGTTTATTTCCTGTTTATGATAATGAAATTATGTTTGATTTTTCTAAGAATCTATAATACGGTTTATTTCATGTTTATGATAATGAAATTATGTTTGATTTTCCCTGAGAATCTATAATTTGAATTTGATTTTTGTGAGAATCTCAGTCATAATAATTAATTAGCTACTGATTCAAACAAGTTGCATTTATCTACTTAGTGTGCTTAAATTGGGAATTCCTTTGCATTTACAATACTTAAGTGATTCCTATGCTTCTCTAATAACCTTCTAACTGAATCCACAATTCCAAAACCATGATTGTCAAGCTGCTTATCTACCTTTGATTTGGCTAGATTACTCTGGATGCTTCTGGACTTGATTGTAGCTGACTGCAGAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGTAACCCGTACAAGATCAAAGTGTGTGACAGAAGTGTGTTATCATGCGAGTTCATAAAAAATATCTTTATTTGGTGACCACACCTTAGGCTTTATGTAACTAGTTTGGAGCCTTGTCTTGTTTTTAGGTCATGATGGTAACAGTTTAGTTCTGTTCCTGTGACAGTGGTCAGTATAAAACAAAGTAATTGATACTTTTATTGTTTGGTGTAGTAGAATTTATTGTAGGGTATCACCTGCTCGCATGGTTAACTAAATGTTAATAGTAGGTTTTCATGTTAATAAACCGAATCAATATTTGATTATATGGCTTTCTATGCTGCTATTATCTAGGCGGGTTGGATAAATGCTGATTATTTCCTTGTGCTAATGCAACAATAGTAACAAATGTCCATATGTTGCTCTCAATCTGTTTTGAATGTCTCTTTTATGCATAATGTCGTAGGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAGTAGAACCTAAAACGATCAAGTGTCATTTGTAAATAAGTAATATAAGTATACACCTTTTGTTTGTATTAAATTCTTTCAATATACATATTATTAACTGTTCTTTTGGTAATATTGCAGAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGGTATGGATATTTGCTGGTGTTGTTTTTTTTGTTTTACTGAAACACTGGATATTTGCTACCATCAGCCTTCCGTATGTTCTGCCTGAGTTCATTAATCATGTACATGTGCACATAATTTTACCTTCTCCAGGAAGAAGTCAAAGCCTGAATTCATTGGTCATGTTTTCTTAAATACAGTTAGATACTTTGGTTTTGCTACATTACAACATCTAGAAATATAAAAATTCTCTCTTGCATACTTCATAGAATTAAGTTCTGGTTTAAGACTCGCACATCCTATTATTTCTTTTGGATTTTTCCTTTAAGGGAAAAAAGTGAGAGGTAGTTAACACCAGTAGGGCATGTAAAGGTAAACCTTTTGAGCTAGCTTCTGATATTCCAAGATACATCCTTTCTGGAGAAAGGTGTTTCACACCAGAGTTTGAGAAAATTATCATTCATAAACACGAACTTTTGAAATTTGAATCCGGAAGACTTTTCAATACATCCAGATTGATAGAAGGTAGATACATGGAATTCTTAGTTAGGGCTTGGGATCACAGAGCTGATCTGGTTACATCAACTACTGTAGATGATACAATAAAAAGATTGATGACATTTTCCCCATGTTTCCTTCTACAATTGGACTCTATTGACAACAACATTATTACCACTGCTCTGACTATTATTGCATTATATTCAGACTCAGATTTGTATGGTAATGCTGTAATTTTATGCCAATGATACATTAATTCATGCTTTGTTTCATCATTGTATTTCAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGAGTAACCATGCCACAGCGTACGGGAAGTAAGCCATTTCGACAAATAAAGTATGACATGGTAATATGACATCCATACGAAAATAATGTTTGCATGAATTACTTTGTTTTCTAGAAGTGTGATATATTGATTGAATTTTTTGTAGGGTTGAAGTTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTAAGTTTATCTTACTTCCTCTCTGTTTTTTAAGTTCCATAAGTGGAGTTTTCTAAGTTCCATAAGTGGGTTTTGAAACTGTGAAACCCATAAAATCTCCACATTTTATTTTAATCAAATTTTGTCTTGGTTTGAAACACATAACTTGTTTCACTTTCTGCTGAATGCGAAGGAAAGATCTTTTACAAATCAACTACATTTTGCATTAATTGACTTGGTCGACTAATTTTGGGTTCTGTTTGTCTACATCAGGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGACTGCTCTCAAGTTAAGTGGTGTTGCTGATATGCTTCCTTGCTGACTGCTCTGCTAATTAAAGTGCCTCATTTCTATTGGCCGACTCTTCTCTGTTGTAGACAAGTCAGTTTGAATTTTTATATAATTAGTCATCAGATAAACTGGAATTTTTAGATAATTAGGCATCAGACAATTGATTTGGATTTTTTGTATTGAACTGGGGTTGTGTTGTTTTCATTGATTTGTATGCAATGATGATGGTATTACTATAATGTAGAAATCAATGATATATCTTTGGGATATGTAGTAG

mRNA sequence

ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGATTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGACTGCTCTCAAGTTAAGTGGTGTTGCTGATATGCTTCCTTGCTGACTGCTCTGCTAATTAAAGTGCCTCATTTCTATTGGCCGACTCTTCTCTGTTGTAGACAAGTCAGTTTGAATTTTTATATAATTAGTCATCAGATAAACTGGAATTTTTAGATAATTAGGCATCAGACAATTGATTTGGATTTTTTGTATTGAACTGGGGTTGTGTTGTTTTCATTGATTTGTATGCAATGATGATGGTATTACTATAATGTAGAAATCAATGATATATCTTTGGGATATGTAGTAG

Coding sequence (CDS)

ATGAGGTGTGTTACTCTGAGTTCTCTTATTGGGTTAGGAGGGCCGAGGGGGTTAGCATATGAAGAAGCGACAAACTTCCTCTCTCACTCGGCGACTCGACTCCATCTTCACCGCAAGAGATTCTTAAAATTCCTCCATGAAAATCGAGTTTATTCAATCTTAATCGAGCCTTTTCAAAAGCTTGCAAGTCTGCGCAAGCTGTTGCTTGAGCTGATTGTTGAGCTTGAGTTTGCTGCAGCAACTTTTGAGGGCGGTAAGGCTATCTTGCAAGCACTTAATGATATGCTAGGAGTGTTGTTTTATGTTTTTATGGAGTATCATGCATTTCCTCTGATGGATGAGGCGTTTCAGTTAAATGAGTCCAAACGATTTCTGCCAGAGTGGCTTCCACATGTTTCCTTTGAGAAAGGTGGTAAGATCTGTAATGCAATTGGAGAAGGTGAGACCATAACTGTTGATAAAAGTGAGATAAAAAAGAGGCAAAAACAGAAAACAAGTGGAAGTTCCAAGAGAAAACAATATGGCCCAGGATATGCTGTTCGAAGACGACTTGGACAGTCTCTTACAAGGTCAGCTGGGAAGAAACTTCGGGTAGCGTTTTATGAAGGTCGAGTAGTGGGTGATGATGGAAATGAATTCACAAGGTATATTGGGAAAATTGTTCGTAACCCCAATTTGTGTCCCGGGAGAGTTCACAAATGGGAAGATTTGGACTCAGATAATGTAAACATATGTGAGCTGTTTTACAGAAAATCGGTGGGAAAAATTCTGAAAACAGAGGTGGATTCTGGAAATCCTCCAAGTTTTGAGAAGTTTTGGTTCGACACTCACAAAACAGGGAATATCTTAGACAAGCCCGAAACTGTGGAAAAACATGTATTTTGTGACAATTATTTGGATGGTGGATATCATTTCTATTGGCTTCCTTGCTGA

Protein sequence

MRCVTLSSLIGLGGPRGLAYEEATNFLSHSATRLHLHRKRFLKFLHENRVYSILIEPFQKLASLRKLLLELIVELEFAAATFEGGKAILQALNDMLGVLFYVFMEYHAFPLMDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKRKQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVNICELFYRKSVGKILKTEVDSGNPPSFEKFWFDTHKTGNILDKPETVEKHVFCDNYLDGGYHFYWLPC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13824	Spo13824	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13824.1	Spo13824.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13824.1.exon.1	Spo13824.1.exon.1	exon
Spo13824.1.exon.2	Spo13824.1.exon.2	exon
Spo13824.1.exon.3	Spo13824.1.exon.3	exon
Spo13824.1.exon.4	Spo13824.1.exon.4	exon
Spo13824.1.exon.5	Spo13824.1.exon.5	exon
Spo13824.1.exon.6	Spo13824.1.exon.6	exon
Spo13824.1.exon.7	Spo13824.1.exon.7	exon
Spo13824.1.exon.8	Spo13824.1.exon.8	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13824.1.CDS.1	Spo13824.1.CDS.1	CDS
Spo13824.1.CDS.2	Spo13824.1.CDS.2	CDS
Spo13824.1.CDS.3	Spo13824.1.CDS.3	CDS
Spo13824.1.CDS.4	Spo13824.1.CDS.4	CDS
Spo13824.1.CDS.5	Spo13824.1.CDS.5	CDS
Spo13824.1.CDS.6	Spo13824.1.CDS.6	CDS
Spo13824.1.CDS.7	Spo13824.1.CDS.7	CDS
Spo13824.1.CDS.8	Spo13824.1.CDS.8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13824.1.utr3p.1	Spo13824.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902230009|gb|KNA21675.1| (hypothetical protein SOVF_041030 [Spinacia oleracea])

HSP 1 Score: 249.2 bits (635), Expect = 9.300e-63
Identity = 123/151 (81.46%), Postives = 125/151 (82.78%), Query Frame = 1

		  
Query: 112 MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKR 171
           MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE                         
Sbjct: 1   MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE------------------------- 60

Query: 172 KQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRV 231
           +QYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RV
Sbjct: 61  EQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRV 120

Query: 232 HKWEDLDSDNVNICELFYRKSVGKILKTEVD 263
           HKWEDLDSDNVNICELFYRKSVGKILKTEV+
Sbjct: 121 HKWEDLDSDNVNICELFYRKSVGKILKTEVE 126

[Close]

BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902209628|gb|KNA16244.1| (hypothetical protein SOVF_090880 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 118.6 bits (296), Expect = 1.900e-23
Identity = 74/172 (43.02%), Postives = 87/172 (50.58%), Query Frame = 1

		  
Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWE--------------- 250
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWE               
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNVEHMWAVLQ 143

Query: 251 -----------DLDSDNVNICELFYRKSVGKI------LKTEVDSGNPPSFEKFWFDTHK 310
                      +++  +V I E F R++ G +      +K +   G  P+         +
Sbjct: 144 EMIKKTIQENPEMEVFDV-IEECFGRRNKGYVAGYGGSVKPKDLRGPLPNRFDLEMKLKQ 203

[Close]

BLAST of Spo13824.1 vs. NCBI nr
Match: gi|902209629|gb|KNA16245.1| (hypothetical protein SOVF_090880 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 111.3 bits (277), Expect = 3.000e-21
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1

		  
Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWEDLDSDNV
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNV 135

[Close]

BLAST of Spo13824.1 vs. NCBI nr
Match: gi|698526391|ref|XP_009760024.1| (PREDICTED: uncharacterized protein LOC104212458 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 65.5 bits (158), Expect = 1.900e-7
Identity = 34/118 (28.81%), Postives = 54/118 (45.76%), Query Frame = 1

		  
Query: 197 RVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVN----ICELFYRKS 256
           +V FY    VG +   F+R++GKIVR+ N+CP  V  W D+  + +N      E    ++
Sbjct: 7   KVTFYNNLTVGTNSKLFSRHLGKIVRDRNMCPLGVSSWNDIKEEKLNHMWAAIEARSNRN 66

Query: 257 VGKILKTEV------------------DSGNPPSFEKFWFDTHKTGNILDKPETVEKH 293
              + K ++                    GNPP+    +F+T K    L +PE +EKH
Sbjct: 67  AANLAKLKMLHHISSKPIREIIYQKGGKDGNPPNLATIFFETRKKDIKLVEPEAIEKH 124

[Close]

BLAST of Spo13824.1 vs. NCBI nr
Match: gi|565354772|ref|XP_006344283.1| (PREDICTED: uncharacterized protein LOC102597177 [Solanum tuberosum])

HSP 1 Score: 62.4 bits (150), Expect = 1.600e-6
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1

		  
Query: 180 VRRRLGQSLTRS-----AGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKW 239
           VRR  GQ+  +      AG+KL+V FY  R VG + N F+R++GK+VR+ ++CP  V  W
Sbjct: 332 VRRGRGQNKCQEVASLQAGQKLKVTFYNNRTVGRNSNLFSRHLGKLVRDHSMCPLGVSSW 391

Query: 240 EDLDSDNVN 244
           +D++ + +N
Sbjct: 392 DDIEEEKLN 400

[Close]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ71_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041030 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.500e-63
Identity = 123/151 (81.46%), Postives = 125/151 (82.78%), Query Frame = 1

		  
Query: 112 MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGEGETITVDKSEIKKRQKQKTSGSSKR 171
           MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE                         
Sbjct: 1   MDEAFQLNESKRFLPEWLPHVSFEKGGKICNAIGE------------------------- 60

Query: 172 KQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRV 231
           +QYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RV
Sbjct: 61  EQYGPGYAVRRRLGQSLTRSAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRV 120

Query: 232 HKWEDLDSDNVNICELFYRKSVGKILKTEVD 263
           HKWEDLDSDNVNICELFYRKSVGKILKTEV+
Sbjct: 121 HKWEDLDSDNVNICELFYRKSVGKILKTEVE 126

[Close]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB57_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_090880 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.300e-23
Identity = 74/172 (43.02%), Postives = 87/172 (50.58%), Query Frame = 1

		  
Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWE--------------- 250
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWE               
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNVEHMWAVLQ 143

Query: 251 -----------DLDSDNVNICELFYRKSVGKI------LKTEVDSGNPPSFEKFWFDTHK 310
                      +++  +V I E F R++ G +      +K +   G  P+         +
Sbjct: 144 EMIKKTIQENPEMEVFDV-IEECFGRRNKGYVAGYGGSVKPKDLRGPLPNRFDLEMKLKQ 203

[Close]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9T4_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_090880 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.100e-21
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 1

		  
Query: 191 SAGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           S GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCP RVHKWEDLDSDNV
Sbjct: 84  STGKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPVRVHKWEDLDSDNV 135

[Close]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: K4CDQ1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.400e-9
Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 1

		  
Query: 193 GKKLRVAFYEGRVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNVNICELFYRKS 252
           G+KL+V  Y  R VG   N F R++GK  R+ N+CP  V  W D   + +N   ++    
Sbjct: 11  GQKLKVTLYNNRTVGAYTNLFLRHLGKNFRDRNICPLGVSSWNDTKQEKLN--HMWAAVK 70

Query: 253 VGKILKTEVDSGNPPSFEKFWFDTHKTGNILDKPETVEKHV 294
            GK        GNPP     +F+  +  N L  PET+EKHV
Sbjct: 71  GGK-------DGNPPDVASIFFEARQKDNNLVDPETIEKHV 102

[Close]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Match: M1DB85_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400035776 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.900e-7
Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 1

		  
Query: 149 TITVDKSEIKKRQKQKTSGSSKRKQYGPGYAVRRRLGQSLTR-----SAGKKLRVAFYEG 208
           T+  D+ E+ +  +++ +GS + ++      V++  G +L +       G+KLRV FY  
Sbjct: 477 TVPRDEVEVMQDNQRRKTGSCEFEK------VKKVRGPNLCKVVTGLKPGEKLRVTFYHN 536

Query: 209 RVVGDDGNEFTRYIGKIVRNPNLCPGRVHKWEDLDSDNV 243
           RVVGD    F+R++G +VR+ N+CP RVH W D++  N+
Sbjct: 537 RVVGDHHALFSRHLGSLVRDRNMCPLRVHSWTDIEEANL 569

The following BLAST results are available for this feature:

BLAST of Spo13824.1 vs. NCBI nr
BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
BLAST of Spo13824.1 vs. ExPASy Swiss-Prot
BLAST of Spo13824.1 vs. TAIR (Arabidopsis)

BLAST of Spo13824.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902230009\|gb\|KNA21675.1\|	9.3e-63	81.4	hypothetical protein SOVF_0410...	[more]
gi\|902209628\|gb\|KNA16244.1\|	1.9e-23	43.0	hypothetical protein SOVF_0908...	[more]
gi\|902209629\|gb\|KNA16245.1\|	3.0e-21	96.1	hypothetical protein SOVF_0908...	[more]
gi\|698526391\|ref\|XP_009760024.1\|	1.9e-7	28.8	PREDICTED: uncharacterized pro...	[more]
gi\|565354772\|ref\|XP_006344283.1\|	1.6e-6	40.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13824.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RQ71_SPIOL	6.5e-63	81.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9RB57_SPIOL	1.3e-23	43.0	Uncharacterized protein (Fragm...	[more]
A0A0K9R9T4_SPIOL	2.1e-21	96.1	Uncharacterized protein (Fragm...	[more]
K4CDQ1_SOLLC	1.4e-9	36.6	Uncharacterized protein OS=Sol...	[more]
M1DB85_SOLTU	3.9e-7	34.3	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo13824.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo13824.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description