Spo21405 (gene)

Overview
NameSpo21405
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 39076588 .. 39078261 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGAATTTCTTCGACAAAATTGGGGTAATGTTAATGTCAATATACGAGTAAATAGTCTTTTAAAGCTTCCTATTTTTCATGACTAGATTTTGAAGTTGCTCTTCAATTTGTTTGCTCAAGTGCTCATTCTTTTTATCTACACCGTCCAAACTGATATATTCCTCCTTTCCATTACAGTTATCCTCTGCAGCTGATCTCTAGCAGTTATTCTGAACCACTTGCGCTTTTATATCGATTTTTATAAACAAAGAATCTTACTACTTTGTGCCTTCTATAAATTGTTGCAGGTCCCTCAACAGCATCAAGCAAGAAAAAAAACTCAAAAGGAAATCTCATCAAATAAAAATCCTTCAACATTCTCAATATAATGGTCTCATCCAAACTGCAAAAACCCACAAATGAAGAACACAAATTTACACAGAAAATATCAGAGGTGACTGCTTGGGGAAACAGGATGCTTGGACACAAACAACAGGAACACCAAGCAGTGGCCAAACACTGTACCACATGCAAGTGCCCAGCACCGAAAGACACAAAACCAACATGTACTCACATACAGAAGAGAGAACATGCTAGCACCGTAGCTGCCAAAGACATGAAATCCAGTGCGTACACTGAGACAAAGAAGAAAGAAAAGGAAGGACATCCAAGTACAGTCCATAAGGATGCCAAACATACTTCTTGCATTGAGCTGAAGAAGAAGGAAAAGCAGCAAACAACAAATGTTCAAACAAAGGATTCTGAGCAGCCTGTTGGTGCTGAGATGAAGAAGACGGACAAGAAGGAACAACATGCAAAAGGCAACACAACTAACACATTGAGCAAGAAAGTTCACAAGGATGAACCAACCAACCACTGGTTTTCAAGCATGGCAGATCATTGGAAGGAGAAGATCATGATGATGAAGAAGGCCAAGGAAGGCAAGTCAAAAGATAGCAGTAGCACCAGTGACAGCGACAGTGAAGAAGAGTCCTGTGGGATAATAAAGGTATGTATTCAAAATTTTCAAATAGAAGATATCCCCTCAACTTCCTACACCAACTTCCCAGCATGAATCCCACAAATATCTGCATATTGCTAGTAAACATGCATAGCAGAGGCCAGAGAGTGCATGAAAGAAATTATAGAAGGCCTTCTTTTGTAGTCTACTATTAGAATTCCTTGTCTAAAGTCCATTCCACCCCTTTTCCTCCCACTCCCCCTCCCTCTAAATCCTCCCCTCGAAGTTGTGACCTTCTTGACTGTCCAACCCATGCAATTTGATTTATTTATTTATTTTTGCCTTACCTTGCAGACAGACAAGAGACACTACCAAGGGACCAAAACCTCGTCTAAGTGAAAGAGGCTACTGCAGAATCAACAAGGAACAAGATAATAAGGAACTATGGACCGTATAGTATTGCTTAAGTACAAGCTTTTATAATTTGATTTCCTATTTCCTCTAATTCCAATTACTTCAAATATTAATTTCGAACAATAAGATTCTTTACCTATTTTAAGATAGAATTTTCTTTTAGTTTATGAATGTCTTACTGTTTGTAAAAGCTTACCGTTATGGTCATCTTACAACTGGAACATAGACTTGGTTGTGCATTGTCACATATTACGGAGTACTAGTTTACTAATTACTAAAAGTATTTTTTTCTCAATTATGGTCAAGAACCAACCCCGCA

mRNA sequence

TAAGAATTTCTTCGACAAAATTGGGGTCCCTCAACAGCATCAAGCAAGAAAAAAAACTCAAAAGGAAATCTCATCAAATAAAAATCCTTCAACATTCTCAATATAATGGTCTCATCCAAACTGCAAAAACCCACAAATGAAGAACACAAATTTACACAGAAAATATCAGAGGTGACTGCTTGGGGAAACAGGATGCTTGGACACAAACAACAGGAACACCAAGCAGTGGCCAAACACTGTACCACATGCAAGTGCCCAGCACCGAAAGACACAAAACCAACATGTACTCACATACAGAAGAGAGAACATGCTAGCACCGTAGCTGCCAAAGACATGAAATCCAGTGCGTACACTGAGACAAAGAAGAAAGAAAAGGAAGGACATCCAAGTACAGTCCATAAGGATGCCAAACATACTTCTTGCATTGAGCTGAAGAAGAAGGAAAAGCAGCAAACAACAAATGTTCAAACAAAGGATTCTGAGCAGCCTGTTGGTGCTGAGATGAAGAAGACGGACAAGAAGGAACAACATGCAAAAGGCAACACAACTAACACATTGAGCAAGAAAGTTCACAAGGATGAACCAACCAACCACTGGTTTTCAAGCATGGCAGATCATTGGAAGGAGAAGATCATGATGATGAAGAAGGCCAAGGAAGGCAAGTCAAAAGATAGCAGTAGCACCAGTGACAGCGACAGTGAAGAAGAGTCCTGTGGGATAATAAAGACAGACAAGAGACACTACCAAGGGACCAAAACCTCGTCTAAGTGAAAGAGGCTACTGCAGAATCAACAAGGAACAAGATAATAAGGAACTATGGACCGTATAGTATTGCTTAAGTACAAGCTTTTATAATTTGATTTCCTATTTCCTCTAATTCCAATTACTTCAAATATTAATTTCGAACAATAAGATTCTTTACCTATTTTAAGATAGAATTTTCTTTTAGTTTATGAATGTCTTACTGTTTGTAAAAGCTTACCGTTATGGTCATCTTACAACTGGAACATAGACTTGGTTGTGCATTGTCACATATTACGGAGTACTAGTTTACTAATTACTAAAAGTATTTTTTTCTCAATTATGGTCAAGAACCAACCCCGCA

Coding sequence (CDS)

ATGGTCTCATCCAAACTGCAAAAACCCACAAATGAAGAACACAAATTTACACAGAAAATATCAGAGGTGACTGCTTGGGGAAACAGGATGCTTGGACACAAACAACAGGAACACCAAGCAGTGGCCAAACACTGTACCACATGCAAGTGCCCAGCACCGAAAGACACAAAACCAACATGTACTCACATACAGAAGAGAGAACATGCTAGCACCGTAGCTGCCAAAGACATGAAATCCAGTGCGTACACTGAGACAAAGAAGAAAGAAAAGGAAGGACATCCAAGTACAGTCCATAAGGATGCCAAACATACTTCTTGCATTGAGCTGAAGAAGAAGGAAAAGCAGCAAACAACAAATGTTCAAACAAAGGATTCTGAGCAGCCTGTTGGTGCTGAGATGAAGAAGACGGACAAGAAGGAACAACATGCAAAAGGCAACACAACTAACACATTGAGCAAGAAAGTTCACAAGGATGAACCAACCAACCACTGGTTTTCAAGCATGGCAGATCATTGGAAGGAGAAGATCATGATGATGAAGAAGGCCAAGGAAGGCAAGTCAAAAGATAGCAGTAGCACCAGTGACAGCGACAGTGAAGAAGAGTCCTGTGGGATAATAAAGACAGACAAGAGACACTACCAAGGGACCAAAACCTCGTCTAAGTGA

Protein sequence

MVSSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTCTHIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNVQTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPTNHWFSSMADHWKEKIMMMKKAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21405.1Spo21405.1mRNA


Homology
[Close]
BLAST of Spo21405.1 vs. NCBI nr
Match: gi|902221268|gb|KNA18863.1| (hypothetical protein SOVF_066640 [Spinacia oleracea])

HSP 1 Score: 430.3 bits (1105), Expect = 2.100e-117
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 1 

		  

Query: 1   MVSSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60
           M SSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC
Sbjct: 1   MASSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60

Query: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120
           THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV
Sbjct: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120

Query: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPTNHWFSSMADHWKEKIMMMK 180
           QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPT+HWFSSMADHWKEKIMMMK
Sbjct: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPTSHWFSSMADHWKEKIMMMK 180

Query: 181 KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK 222
           KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK
Sbjct: 181 KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK 221
[Close]
BLAST of Spo21405.1 vs. NCBI nr
Match: gi|731330768|ref|XP_010676310.1| (PREDICTED: nucleolar protein 58-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 288.1 bits (736), Expect = 1.300e-74
Identity = 155/216 (71.76%), Postives = 179/216 (82.87%), Query Frame = 1 

		  

Query: 1   MVSSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60
           M S+KLQKPTNEEHKF+QKISEVTAWGNR+ G KQQEHQAVAKHCTTC CPA KDTKP C
Sbjct: 1   MASTKLQKPTNEEHKFSQKISEVTAWGNRVFGQKQQEHQAVAKHCTTCHCPASKDTKPAC 60

Query: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120
             +QK+E+A+T++ KDMKS A+  TKKKE   H ST+HKDAKHT+C ELKK+EKQ T N 
Sbjct: 61  NDLQKKENANTISVKDMKSDAHAVTKKKE---HASTIHKDAKHTTCAELKKEEKQHTANF 120

Query: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTT---NTLSKKVHKDEPT-NHWFSSMADHWKEKI 180
           Q+KDS++P GAE+KK +KKE HAK NTT   NTL KK HKDEPT NH FSSMADHWKEKI
Sbjct: 121 QSKDSKKPAGAEIKK-EKKEHHAKSNTTTACNTLVKKEHKDEPTNNHCFSSMADHWKEKI 180

Query: 181 MMMKKAKEGKSKDSSSTSDSDSEEESCGIIKTDKRH 213
           MMMKKAK+GK KD+SS+S SDSE+++  I K DKRH
Sbjct: 181 MMMKKAKDGKCKDNSSSSGSDSEDDASVIKKKDKRH 212
[Close]
BLAST of Spo21405.1 vs. NCBI nr
Match: gi|902233720|gb|KNA23179.1| (hypothetical protein SOVF_027070 [Spinacia oleracea])

HSP 1 Score: 102.1 bits (253), Expect = 1.300e-18
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 1 

		  

Query: 83  TETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNVQTKDSEQPVGAEMKKTDKKEQH 142
           T  K+++KE H +TVHKDAKHTS IEL KKE +QTTNVQTK         MKK +KKE+H
Sbjct: 4   TRRKRRKKEEHVNTVHKDAKHTSRIEL-KKENKQTTNVQTKGFCAACWCWMKKKEKKEKH 63

Query: 143 AKGNTTNT---LSKKVHKDEPTNHWFSSMADHWKEKIM 178
           AK  TTN+   LSKK HK EPTN  FSSM DHWKEKI+
Sbjct: 64  AKSKTTNSCNALSKKEHKKEPTNQCFSSMEDHWKEKIL 100
[Close]
BLAST of Spo21405.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH88_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066640 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.500e-117
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 1 

		  

Query: 1   MVSSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60
           M SSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC
Sbjct: 1   MASSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60

Query: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120
           THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV
Sbjct: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120

Query: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPTNHWFSSMADHWKEKIMMMK 180
           QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPT+HWFSSMADHWKEKIMMMK
Sbjct: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTTNTLSKKVHKDEPTSHWFSSMADHWKEKIMMMK 180

Query: 181 KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK 222
           KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK
Sbjct: 181 KAKEGKSKDSSSTSDSDSEEESCGIIKTDKRHYQGTKTSSK 221
[Close]
BLAST of Spo21405.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEI0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g099010 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.000e-75
Identity = 155/216 (71.76%), Postives = 179/216 (82.87%), Query Frame = 1 

		  

Query: 1   MVSSKLQKPTNEEHKFTQKISEVTAWGNRMLGHKQQEHQAVAKHCTTCKCPAPKDTKPTC 60
           M S+KLQKPTNEEHKF+QKISEVTAWGNR+ G KQQEHQAVAKHCTTC CPA KDTKP C
Sbjct: 1   MASTKLQKPTNEEHKFSQKISEVTAWGNRVFGQKQQEHQAVAKHCTTCHCPASKDTKPAC 60

Query: 61  THIQKREHASTVAAKDMKSSAYTETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNV 120
             +QK+E+A+T++ KDMKS A+  TKKKE   H ST+HKDAKHT+C ELKK+EKQ T N 
Sbjct: 61  NDLQKKENANTISVKDMKSDAHAVTKKKE---HASTIHKDAKHTTCAELKKEEKQHTANF 120

Query: 121 QTKDSEQPVGAEMKKTDKKEQHAKGNTT---NTLSKKVHKDEPT-NHWFSSMADHWKEKI 180
           Q+KDS++P GAE+KK +KKE HAK NTT   NTL KK HKDEPT NH FSSMADHWKEKI
Sbjct: 121 QSKDSKKPAGAEIKK-EKKEHHAKSNTTTACNTLVKKEHKDEPTNNHCFSSMADHWKEKI 180

Query: 181 MMMKKAKEGKSKDSSSTSDSDSEEESCGIIKTDKRH 213
           MMMKKAK+GK KD+SS+S SDSE+++  I K DKRH
Sbjct: 181 MMMKKAKDGKCKDNSSSSGSDSEDDASVIKKKDKRH 212
[Close]
BLAST of Spo21405.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RW96_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_027070 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.200e-19
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 1 

		  

Query: 83  TETKKKEKEGHPSTVHKDAKHTSCIELKKKEKQQTTNVQTKDSEQPVGAEMKKTDKKEQH 142
           T  K+++KE H +TVHKDAKHTS IEL KKE +QTTNVQTK         MKK +KKE+H
Sbjct: 4   TRRKRRKKEEHVNTVHKDAKHTSRIEL-KKENKQTTNVQTKGFCAACWCWMKKKEKKEKH 63

Query: 143 AKGNTTNT---LSKKVHKDEPTNHWFSSMADHWKEKIM 178
           AK  TTN+   LSKK HK EPTN  FSSM DHWKEKI+
Sbjct: 64  AKSKTTNSCNALSKKEHKKEPTNQCFSSMEDHWKEKIL 100
The following BLAST results are available for this feature:
BLAST of Spo21405.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 3
Match NameE-valueIdentityDescription
gi|902221268|gb|KNA18863.1|2.1e-11799.1hypothetical protein SOVF_0666... [more]
gi|731330768|ref|XP_010676310.1|1.3e-7471.7PREDICTED: nucleolar protein 5... [more]
gi|902233720|gb|KNA23179.1|1.3e-1863.2hypothetical protein SOVF_0270... [more]
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BLAST of Spo21405.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9RH88_SPIOL1.5e-11799.1Uncharacterized protein OS=Spi... [more]
A0A0J8CEI0_BETVU9.0e-7571.7Uncharacterized protein OS=Bet... [more]
A0A0K9RW96_SPIOL9.2e-1963.2Uncharacterized protein OS=Spi... [more]
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BLAST of Spo21405.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo21405.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007267 cell-cell signaling
biological_process GO:0040029 regulation of gene expression, epigenetic
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051258 protein polymerization
biological_process GO:0007017 microtubule-based process
biological_process GO:0071258 cellular response to gravity
biological_process GO:0006396 RNA processing
biological_process GO:0006508 proteolysis
biological_process GO:0008152 metabolic process
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0048364 root development
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0044238 primary metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0048366 leaf development
biological_process GO:0016458 gene silencing
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0050896 response to stimulus
biological_process GO:0000957 mitochondrial RNA catabolic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0043419 urea catabolic process
biological_process GO:0008033 tRNA processing
biological_process GO:0006364 rRNA processing
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0042991 obsolete transcription factor import into nucleus
biological_process GO:0006397 mRNA processing
biological_process GO:0006402 mRNA catabolic process
biological_process GO:0000963 mitochondrial RNA processing
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0048440 carpel development
biological_process GO:0009651 response to salt stress
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0006428 isoleucyl-tRNA aminoacylation
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0055085 transmembrane transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009908 flower development
biological_process GO:0050794 regulation of cellular process
biological_process GO:0022402 cell cycle process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006312 mitotic recombination
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009640 photomorphogenesis
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0006606 protein import into nucleus
biological_process GO:0016567 protein ubiquitination
biological_process GO:0007275 multicellular organism development
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010048 vernalization response
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009909 regulation of flower development
biological_process GO:0016233 telomere capping
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0009933 meristem structural organization
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0050826 response to freezing
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0019915 lipid storage
biological_process GO:0002100 tRNA wobble adenosine to inosine editing
biological_process GO:0022618 ribonucleoprotein complex assembly
biological_process GO:0006302 double-strand break repair
biological_process GO:0051321 meiotic cell cycle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005732 small nucleolar ribonucleoprotein complex
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0015030 Cajal body
cellular_component GO:0000781 chromosome, telomeric region
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005618 cell wall
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005576 extracellular region
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0000176 nuclear exosome (RNase complex)
cellular_component GO:0030870 Mre11 complex
cellular_component GO:0048046 apoplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005874 microtubule
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0004822 isoleucine-tRNA ligase activity
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0016151 nickel cation binding
molecular_function GO:0004654 polyribonucleotide nucleotidyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008251 tRNA-specific adenosine deaminase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004534 5'-3' exoribonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0043531 ADP binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0009982 pseudouridine synthase activity
RNA-Seq Expression