Spo21363 (gene)

Overview
NameSpo21363
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRing finger protein, putative
Locationchr6 : 39327751 .. 39328590 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAAATTTCCGTTAATTTTCTCTCTCCTCACCCTCAACCTCCTCTTCTCACAACACCTTTTAGCATCTAATGAACTCTGTTCTCCCTTCTCTTGCAACCAACACAGATATGATCCGATCCAATTCCCATTTTGGGTACCCAAAAACCAAACCTCTAGGTGCGGGTACCCCGGGTTCGACGTCTCTTGTAACTCATACGGTCAAACACTCATTCCTCTCAACTCCGGCCACGGTCACCTGATTATTGAGGGTATGTCATACCCAGACCAACTACTCTGGGTATCCGACCCGAAAAAATGCATCCCTAAACGGGTCCTTGACTTCACCCATACGTGGCCTGCCCTTTTAAGGTTCGGACCTCTGGAATCAACTTACACTTACCTTAATTGCTCAGGAACGAAGCTAGACCCGAGCGTGCTTCCCATGGGTACTTCAGTAATTTCGTGTATGAGTGGCAGCAATCATACAGTAGTGGCCGCGTTCGATCATGAGGCGGAGACGAAGATGTTGGAGAGAGGAGGGGAAAGGAAGTGTGAGGTGATCGAGAGAGTAAACGCTGCGTTTTGGTGGCCGGAGATGCGGTACGGGTATGAGTACAGACACGGGGATGAGTACCGGCACGGGTATTACCCGATTGATGATTTGAGTAATGTGTTTGTGCAATTGGGTTGGGATATTCCGAGTTGCGGGGATTGTATACTTCGTGGCGGGTCTTGTGGGTTGGTGGGTGATTCGGGCATTGAAGTTGCTTGCTATATTCCTGCGTCATCTTCTTCCGGTGAGTGTCACTCTTTTTCCTTGTTTGTTTTTATTCAGCTATCTGAAATTGCTACCTGA

mRNA sequence

ATGAATAAATTTCCGTTAATTTTCTCTCTCCTCACCCTCAACCTCCTCTTCTCACAACACCTTTTAGCATCTAATGAACTCTGTTCTCCCTTCTCTTGCAACCAACACAGATATGATCCGATCCAATTCCCATTTTGGGTACCCAAAAACCAAACCTCTAGGTGCGGGTACCCCGGGTTCGACGTCTCTTGTAACTCATACGGTCAAACACTCATTCCTCTCAACTCCGGCCACGGTCACCTGATTATTGAGGGTATGTCATACCCAGACCAACTACTCTGGGTATCCGACCCGAAAAAATGCATCCCTAAACGGGTCCTTGACTTCACCCATACGTGGCCTGCCCTTTTAAGGTTCGGACCTCTGGAATCAACTTACACTTACCTTAATTGCTCAGGAACGAAGCTAGACCCGAGCGTGCTTCCCATGGGTACTTCAGTAATTTCGTGTATGAGTGGCAGCAATCATACAGTAGTGGCCGCGTTCGATCATGAGGCGGAGACGAAGATGTTGGAGAGAGGAGGGGAAAGGAAGTGTGAGGTGATCGAGAGAGTAAACGCTGCGTTTTGGTGGCCGGAGATGCGGTACGGGTATGAGTACAGACACGGGGATGAGTACCGGCACGGGTATTACCCGATTGATGATTTGAGTAATGTGTTTGTGCAATTGGGTTGGGATATTCCGAGTTGCGGGGATTGTATACTTCGTGGCGGGTCTTGTGGGTTGGTGGGTGATTCGGGCATTGAAGTTGCTTGCTATATTCCTGCGTCATCTTCTTCCGGTGAGTGTCACTCTTTTTCCTTGTTTGTTTTTATTCAGCTATCTGAAATTGCTACCTGA

Coding sequence (CDS)

ATGAATAAATTTCCGTTAATTTTCTCTCTCCTCACCCTCAACCTCCTCTTCTCACAACACCTTTTAGCATCTAATGAACTCTGTTCTCCCTTCTCTTGCAACCAACACAGATATGATCCGATCCAATTCCCATTTTGGGTACCCAAAAACCAAACCTCTAGGTGCGGGTACCCCGGGTTCGACGTCTCTTGTAACTCATACGGTCAAACACTCATTCCTCTCAACTCCGGCCACGGTCACCTGATTATTGAGGGTATGTCATACCCAGACCAACTACTCTGGGTATCCGACCCGAAAAAATGCATCCCTAAACGGGTCCTTGACTTCACCCATACGTGGCCTGCCCTTTTAAGGTTCGGACCTCTGGAATCAACTTACACTTACCTTAATTGCTCAGGAACGAAGCTAGACCCGAGCGTGCTTCCCATGGGTACTTCAGTAATTTCGTGTATGAGTGGCAGCAATCATACAGTAGTGGCCGCGTTCGATCATGAGGCGGAGACGAAGATGTTGGAGAGAGGAGGGGAAAGGAAGTGTGAGGTGATCGAGAGAGTAAACGCTGCGTTTTGGTGGCCGGAGATGCGGTACGGGTATGAGTACAGACACGGGGATGAGTACCGGCACGGGTATTACCCGATTGATGATTTGAGTAATGTGTTTGTGCAATTGGGTTGGGATATTCCGAGTTGCGGGGATTGTATACTTCGTGGCGGGTCTTGTGGGTTGGTGGGTGATTCGGGCATTGAAGTTGCTTGCTATATTCCTGCGTCATCTTCTTCCGGTGAGTGTCACTCTTTTTCCTTGTTTGTTTTTATTCAGCTATCTGAAATTGCTACCTGA

Protein sequence

MNKFPLIFSLLTLNLLFSQHLLASNELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHSFSLFVFIQLSEIAT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21363.1Spo21363.1mRNA


Homology
[Close]
BLAST of Spo21363.1 vs. NCBI nr
Match: gi|902196820|gb|KNA13224.1| (hypothetical protein SOVF_118690 [Spinacia oleracea])

HSP 1 Score: 382.9 bits (982), Expect = 4.900e-103
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 1 

		  

Query: 86  MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT 145
           MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT
Sbjct: 1   MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT 60

Query: 146 SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE 205
           SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE
Sbjct: 61  SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE 120

Query: 206 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHS 265
           YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSS  C S
Sbjct: 121 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSVSCMS 180
[Close]
BLAST of Spo21363.1 vs. NCBI nr
Match: gi|731330737|ref|XP_010676294.1| (PREDICTED: RING-H2 finger protein ATL22-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 322.4 bits (825), Expect = 7.800e-85
Identity = 163/271 (60.15%), Postives = 197/271 (72.69%), Query Frame = 1 

		  

Query: 1   MNKFPLIFSLLTLNLLFSQHL-LASNELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPG 60
           M  FPLIFSLLTLNL FSQ L L + E C+ FSCNQ   DPI FPFWVPKNQTSRCGYPG
Sbjct: 1   MQPFPLIFSLLTLNLFFSQLLQLQALETCTTFSCNQR--DPILFPFWVPKNQTSRCGYPG 60

Query: 61  FDVSCNSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRF 120
           F++SCNSY QTL+ L+S    LI+ G+SYPDQLLWVSDP  CIPKRVL+ + +      F
Sbjct: 61  FELSCNSYSQTLLSLSSDP--LIVRGISYPDQLLWVSDPNHCIPKRVLNLSLS-STPFSF 120

Query: 121 GPLESTYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKC 180
           GP  S YT+LNCSG+K +P+ LPMG+SVISC+SG N+TVVA +  EAE KM+ +GGE  C
Sbjct: 121 GPYSSPYTFLNCSGSK-NPAQLPMGSSVISCLSGPNYTVVATYGGEAEEKMVVKGGEWSC 180

Query: 181 EVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGS 240
           E+I+RVNAAFWW  M Y            G YP  D+S+V+VQL WD+PSC DC +RGGS
Sbjct: 181 EIIKRVNAAFWWRNMGY------------GIYP-SDMSDVYVQLSWDVPSCVDCFMRGGS 240

Query: 241 CGLVGDSGIEVACYIPASSSSGECHSFSLFV 271
           CGLVGDSG++V C++PASS       + L +
Sbjct: 241 CGLVGDSGLQVGCFLPASSGLPNSAKYGLIL 252
[Close]
BLAST of Spo21363.1 vs. NCBI nr
Match: gi|604303997|gb|EYU23347.1| (hypothetical protein MIMGU_mgv1a026003mg, partial [Erythranthe guttata])

HSP 1 Score: 128.3 bits (321), Expect = 2.200e-26
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 1 

		  

Query: 28  CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMS 87
           C P SC+      I+FPF +     +RCG+PGFD+ CN+  QT++ L    G  +++ + 
Sbjct: 24  CKPDSCDAVFGPRIRFPFRLRNRNPTRCGHPGFDLYCNALNQTILNLPKS-GEFVVDHID 83

Query: 88  YPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGTSV 147
           Y  Q L+++DP  C+P R+L+F+         G     YT+LNCS   LD +        
Sbjct: 84  YAAQALFINDPDSCLPGRILNFSLLGSPFR--GAYTRNYTFLNCSSDYLDYTSTRYYYMP 143

Query: 148 ISCMSGSNHTVVAAFDHEAETKMLERGGE--RKCEVIERVNAAFWWPEMRYGYEYRHGDE 207
           + C+SG NHTV+A       T+      E    C  I  V     W   ++         
Sbjct: 144 LFCLSGRNHTVLAT-----NTRPAAAAAEVPPTCRKIGSVLVPLQWTLAQF--------- 203

Query: 208 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHS 267
               Y+   DL    +QL W+ P C DC  RGG CG   DSG E+ CY P+ S       
Sbjct: 204 ----YWSAMDLRED-LQLVWNQPDCSDCESRGGVCGYKDDSGPEIVCYRPSKSGLPRSAK 246

Query: 268 FSLFV 271
           + + +
Sbjct: 264 YGIII 246
[Close]
BLAST of Spo21363.1 vs. NCBI nr
Match: gi|848911338|ref|XP_012854116.1| (PREDICTED: putative RING-H2 finger protein ATL21B [Erythranthe guttata])

HSP 1 Score: 128.3 bits (321), Expect = 2.200e-26
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 1 

		  

Query: 28  CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMS 87
           C P SC+      I+FPF +     +RCG+PGFD+ CN+  QT++ L    G  +++ + 
Sbjct: 24  CKPDSCDAVFGPRIRFPFRLRNRNPTRCGHPGFDLYCNALNQTILNLPKS-GEFVVDHID 83

Query: 88  YPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGTSV 147
           Y  Q L+++DP  C+P R+L+F+         G     YT+LNCS   LD +        
Sbjct: 84  YAAQALFINDPDSCLPGRILNFSLLGSPFR--GAYTRNYTFLNCSSDYLDYTSTRYYYMP 143

Query: 148 ISCMSGSNHTVVAAFDHEAETKMLERGGE--RKCEVIERVNAAFWWPEMRYGYEYRHGDE 207
           + C+SG NHTV+A       T+      E    C  I  V     W   ++         
Sbjct: 144 LFCLSGRNHTVLAT-----NTRPAAAAAEVPPTCRKIGSVLVPLQWTLAQF--------- 203

Query: 208 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHS 267
               Y+   DL    +QL W+ P C DC  RGG CG   DSG E+ CY P+ S       
Sbjct: 204 ----YWSAMDLRED-LQLVWNQPDCSDCESRGGVCGYKDDSGPEIVCYRPSKSGLPRSAK 246

Query: 268 FSLFV 271
           + + +
Sbjct: 264 YGIII 246
[Close]
BLAST of Spo21363.1 vs. NCBI nr
Match: gi|747105536|ref|XP_011101044.1| (PREDICTED: putative RING-H2 finger protein ATL21B [Sesamum indicum])

HSP 1 Score: 128.3 bits (321), Expect = 2.200e-26
Identity = 84/268 (31.34%), Postives = 124/268 (46.27%), Query Frame = 1 

		  

Query: 12  TLNLLFSQHLLA-------SNELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSC 71
           TL LLFS  +         S   C P SC+      ++FPF +   Q  RCGYPGFD+ C
Sbjct: 5   TLLLLFSSSIFTFLTMPALSANPCRPDSCDTTFGVEVRFPFRLRNRQPVRCGYPGFDLYC 64

Query: 72  NSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLES 131
           N+  QT++ L    G  +++ + Y  Q L+++DP  C+PKR+L+FT +       G    
Sbjct: 65  NAQNQTILSLPES-GEFVVDHIDYTAQALFINDPDLCLPKRILNFTLSGSVFR--GAYMR 124

Query: 132 TYTYLNCSGTKLDPSVLPMGTSVIS--CMSGSNHTVVAAFDHEAETKMLERGGERKCEVI 191
            YT+LNCS   +D +    GT  I   C+SG N+TV+A       ++ L  G    C  I
Sbjct: 125 EYTFLNCSSDYMDYT----GTRYIPLFCLSGRNYTVLA-----VNSRSLGGGVPAACREI 184

Query: 192 ERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGL 251
             V+    W   ++ +     D                ++L W  P+C  C  +GG CG 
Sbjct: 185 ANVSVPLQWGLSQFYWMDLRED----------------LELVWSEPACWGCENQGGICGY 244

Query: 252 VGDSGIEVACYIPASSSSGECHSFSLFV 271
            GDSG E+ CY  + S       + + V
Sbjct: 245 KGDSGREIGCYRRSRSGLPRSAKYGIIV 244
[Close]
BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2R6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118690 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.400e-103
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 1 

		  

Query: 86  MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT 145
           MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT
Sbjct: 1   MSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGT 60

Query: 146 SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE 205
           SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE
Sbjct: 61  SVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWWPEMRYGYEYRHGDE 120

Query: 206 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHS 265
           YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSS  C S
Sbjct: 121 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSVSCMS 180
[Close]
BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIJ9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098830 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.400e-85
Identity = 163/271 (60.15%), Postives = 197/271 (72.69%), Query Frame = 1 

		  

Query: 1   MNKFPLIFSLLTLNLLFSQHL-LASNELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPG 60
           M  FPLIFSLLTLNL FSQ L L + E C+ FSCNQ   DPI FPFWVPKNQTSRCGYPG
Sbjct: 1   MQPFPLIFSLLTLNLFFSQLLQLQALETCTTFSCNQR--DPILFPFWVPKNQTSRCGYPG 60

Query: 61  FDVSCNSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRF 120
           F++SCNSY QTL+ L+S    LI+ G+SYPDQLLWVSDP  CIPKRVL+ + +      F
Sbjct: 61  FELSCNSYSQTLLSLSSDP--LIVRGISYPDQLLWVSDPNHCIPKRVLNLSLS-STPFSF 120

Query: 121 GPLESTYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKC 180
           GP  S YT+LNCSG+K +P+ LPMG+SVISC+SG N+TVVA +  EAE KM+ +GGE  C
Sbjct: 121 GPYSSPYTFLNCSGSK-NPAQLPMGSSVISCLSGPNYTVVATYGGEAEEKMVVKGGEWSC 180

Query: 181 EVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGS 240
           E+I+RVNAAFWW  M Y            G YP  D+S+V+VQL WD+PSC DC +RGGS
Sbjct: 181 EIIKRVNAAFWWRNMGY------------GIYP-SDMSDVYVQLSWDVPSCVDCFMRGGS 240

Query: 241 CGLVGDSGIEVACYIPASSSSGECHSFSLFV 271
           CGLVGDSG++V C++PASS       + L +
Sbjct: 241 CGLVGDSGLQVGCFLPASSGLPNSAKYGLIL 252
[Close]
BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Match: A0A022Q3V6_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026003mg PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.500e-26
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 1 

		  

Query: 28  CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMS 87
           C P SC+      I+FPF +     +RCG+PGFD+ CN+  QT++ L    G  +++ + 
Sbjct: 24  CKPDSCDAVFGPRIRFPFRLRNRNPTRCGHPGFDLYCNALNQTILNLPKS-GEFVVDHID 83

Query: 88  YPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGTSV 147
           Y  Q L+++DP  C+P R+L+F+         G     YT+LNCS   LD +        
Sbjct: 84  YAAQALFINDPDSCLPGRILNFSLLGSPFR--GAYTRNYTFLNCSSDYLDYTSTRYYYMP 143

Query: 148 ISCMSGSNHTVVAAFDHEAETKMLERGGE--RKCEVIERVNAAFWWPEMRYGYEYRHGDE 207
           + C+SG NHTV+A       T+      E    C  I  V     W   ++         
Sbjct: 144 LFCLSGRNHTVLAT-----NTRPAAAAAEVPPTCRKIGSVLVPLQWTLAQF--------- 203

Query: 208 YRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVACYIPASSSSGECHS 267
               Y+   DL    +QL W+ P C DC  RGG CG   DSG E+ CY P+ S       
Sbjct: 204 ----YWSAMDLRED-LQLVWNQPDCSDCESRGGVCGYKDDSGPEIVCYRPSKSGLPRSAK 246

Query: 268 FSLFV 271
           + + +
Sbjct: 264 YGIII 246
[Close]
BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Match: A0A022RIM0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020706mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.800e-26
Identity = 75/228 (32.89%), Postives = 109/228 (47.81%), Query Frame = 1 

		  

Query: 28  CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMS 87
           C P SC+      I+FPF +   Q  RCGYPGFD+ CNS  QT++ L    G  +++ + 
Sbjct: 24  CEPVSCDHITGPEIRFPFRLANRQPVRCGYPGFDLYCNSRNQTILNLPQS-GEFVVDYID 83

Query: 88  YPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLESTYTYLNCSGTKLDPSVLPMGTSV 147
           Y    +++ DP  C+P R   F+ +       G   S Y ++NCS    D      G  V
Sbjct: 84  YRTPAIYIDDPGSCLPNRSASFSLSDSPFR--GSHLSQYVFINCSDNWADYDAAASGGYV 143

Query: 148 -ISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIERVNAAFWW--PEMRYGYEYRHGD 207
            +SC+SG N TV+AA +    +         KC  +  V+    W  P++ YG+      
Sbjct: 144 ELSCLSGRNSTVLAAMNRPGFSV------PEKCRKVAEVSVPLAWAVPQL-YGWPM---- 203

Query: 208 EYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVGDSGIEVAC 253
                     DLS  F +L W  P CG C ++GG CG  GDSG+++ C
Sbjct: 204 ----------DLSGDF-ELVWSEPPCGRCEMQGGVCGFEGDSGLQIGC 226
[Close]
BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Match: A0A059DFG9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01473 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.400e-24
Identity = 77/253 (30.43%), Postives = 117/253 (46.25%), Query Frame = 1 

		  

Query: 1   MNKFPLIFSLLTLNLLFSQHLLASNELCSPFSCNQHRYDP-IQFPFWVPKNQTSRCGYPG 60
           M    L  +LL   LL ++   AS + C+P  C  HR +P I FPF +   Q   CGYPG
Sbjct: 1   MKILTLFVTLLFFFLLCTE---ASAKTCTPAFC--HRDEPMIHFPFRIGTLQPESCGYPG 60

Query: 61  FDVSCNSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRF 120
           FD+SC+   +T++ L +  G   ++G+ Y  Q +WV+DP+ C+PKR+L    +       
Sbjct: 61  FDLSCDGVNRTVLELPNS-GPFTVQGIDYAGQEMWVNDPEACLPKRLLSLNLSGSPFA-- 120

Query: 121 GPLESTYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKC 180
           G     +T+ NCS      S +  G   I+C+SGSN+ V A         +        C
Sbjct: 121 GVYSQNFTFFNCSS-----SYIRYGLDPIACLSGSNYRVFATSSPYVVNTL-----PSSC 180

Query: 181 EVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGS 240
            +++ V     +P            +               + L W +P CG C++RGG 
Sbjct: 181 ALVKTVPVPVEFPFFEQVISSNLSSD---------------LPLQWGVPQCGRCVVRGGR 220

Query: 241 CGLVGDSGIEVAC 253
           CGL G+S  E+ C
Sbjct: 241 CGLKGNSTTEIQC 220
[Close]
BLAST of Spo21363.1 vs. ExPASy Swiss-Prot
Match: AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana GN=ATL21A PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.200e-12
Identity = 58/249 (23.29%), Postives = 107/249 (42.97%), Query Frame = 1 

		  

Query: 11  LTLNLLFSQHLLASN--ELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYG 70
           L L L F   LL ++  + CS  SC +     ++FPFW+   Q   CG+ GF++ C +  
Sbjct: 7   LFLYLFFLFPLLHASHPQQCSSSSCGRDDVH-VRFPFWLLSKQPELCGHAGFNLQCTASP 66

Query: 71  QTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLES---- 130
           +T + L +  G  ++  + Y  Q + + DP+ C+ +++L F       +   P  +    
Sbjct: 67  KTALKLPNS-GTFLVREIDYLSQQIRLYDPENCLARKLLTFD------ISRSPFSALYLV 126

Query: 131 TYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIER 190
           +YT+L+C       S        I C+  S  + +A    +    ML       C++++ 
Sbjct: 127 SYTFLSCPNEVAKSSRF----DSIPCLGNSTTSFLATTSLDLAKSMLP-----SCQIVKT 186

Query: 191 VNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVG 250
           ++     P  R     +             D+++  + L WD PSC DC      CG   
Sbjct: 187 LDV----PVSRRVIAKKSRFS--------TDVNDKDLWLKWDSPSCSDCERDFLRCGFRS 226

Query: 251 DSGIEVACY 254
           ++ ++V C+
Sbjct: 247 NTSLQVKCF 226
[Close]
BLAST of Spo21363.1 vs. TAIR (Arabidopsis)
Match: AT5G53110.1 (RING/U-box superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.600e-19
Identity = 73/254 (28.74%), Postives = 114/254 (44.88%), Query Frame = 1 

		  

Query: 8   FSLLTLNLLF-SQHLLASNELCSPFSCNQHRYDPI-QFPFWVPKNQTSRCGYP-GFDVSC 67
           FSLL L+LL  +     S   C+   C   R  PI +FPF +   Q+  CGY  GFD++C
Sbjct: 9   FSLLFLSLLIPTTTTTTSTVTCTNAVCR--RDGPIIRFPFRLKHQQSHSCGYDKGFDLTC 68

Query: 68  --NSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPL 127
             N+  +T I L    G+  +E + Y  Q +W++DP  C+P+R+L         L   P 
Sbjct: 69  DINAGNRTTITLPFS-GNFTVEEIDYAAQEIWINDPNNCLPQRILQLN------LNSTPF 128

Query: 128 ESTY----TYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERK 187
              Y    T+ NC  ++      P+    I+C+SG N TV A        +++     + 
Sbjct: 129 SGVYMRQFTFFNCPTSEY-LRFRPLNP--ITCLSGKNSTVFAT----PSPRVINYLSSQS 188

Query: 188 CEVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGG 247
           C +++ V     WP             +        DLS+  + L W +P C  C ++GG
Sbjct: 189 CRLMKTVYVPVRWP-------------FYEQIVSSSDLSDN-LWLTWRVPRCSRCEIKGG 232

Query: 248 SCGLVGDSGIEVAC 253
            CG+  +S  E+ C
Sbjct: 249 KCGIKSNSSREIIC 232
[Close]
BLAST of Spo21363.1 vs. TAIR (Arabidopsis)
Match: AT2G46495.1 (RING/U-box superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.900e-13
Identity = 58/249 (23.29%), Postives = 107/249 (42.97%), Query Frame = 1 

		  

Query: 11  LTLNLLFSQHLLASN--ELCSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYG 70
           L L L F   LL ++  + CS  SC +     ++FPFW+   Q   CG+ GF++ C +  
Sbjct: 7   LFLYLFFLFPLLHASHPQQCSSSSCGRDDVH-VRFPFWLLSKQPELCGHAGFNLQCTASP 66

Query: 71  QTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLES---- 130
           +T + L +  G  ++  + Y  Q + + DP+ C+ +++L F       +   P  +    
Sbjct: 67  KTALKLPNS-GTFLVREIDYLSQQIRLYDPENCLARKLLTFD------ISRSPFSALYLV 126

Query: 131 TYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGERKCEVIER 190
           +YT+L+C       S        I C+  S  + +A    +    ML       C++++ 
Sbjct: 127 SYTFLSCPNEVAKSSRF----DSIPCLGNSTTSFLATTSLDLAKSMLP-----SCQIVKT 186

Query: 191 VNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCGDCILRGGSCGLVG 250
           ++     P  R     +             D+++  + L WD PSC DC      CG   
Sbjct: 187 LDV----PVSRRVIAKKSRFS--------TDVNDKDLWLKWDSPSCSDCERDFLRCGFRS 226

Query: 251 DSGIEVACY 254
           ++ ++V C+
Sbjct: 247 NTSLQVKCF 226
[Close]
BLAST of Spo21363.1 vs. TAIR (Arabidopsis)
Match: AT5G36001.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.900e-10
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 1 

		  

Query: 28  CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGFDVSCNSYGQTLIPLNSGHGHLIIEGMS 87
           C   SC  +  D + FPFW+   Q+S C YPGF++ C    +T + L +    L+     
Sbjct: 30  CYSSSCGGNNLD-VSFPFWLSPEQSSSCDYPGFNLHC----ETALKLPNSRRFLV---QD 89

Query: 88  YPDQLLWVSDPKKCIPKRVLDFTHTWPALLRFGPLE-STYTYLNCSGTKLDPSVLPMGTS 147
              Q + + DP  C+ +R+L F     ++  F PL    YT+L+C    +  S L     
Sbjct: 90  IKSQRIHLRDPDNCLARRLLSFD---ASMSPFSPLHLVNYTFLSCHNENVKSSSL----E 142

Query: 148 VISCMSGS 155
            I C++ S
Sbjct: 150 PIHCLTNS 142
[Close]
BLAST of Spo21363.1 vs. TAIR (Arabidopsis)
Match: AT1G18390.2 (Protein kinase superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.500e-6
Identity = 64/250 (25.60%), Postives = 104/250 (41.60%), Query Frame = 1 

		  

Query: 9   SLLTLNLLFSQHLLASNEL--------CSPFSCNQHRYDPIQFPFWVPKNQTSRCGYPGF 68
           SLL  ++ F   ++A+  L        C P SC +     I +PF++   Q S CGYP F
Sbjct: 7   SLLYTSIFFYFTIIATQTLSLDPKFKACEPKSCGKG--PQISYPFYLSGKQESFCGYPSF 66

Query: 69  DVSCNSYGQTLIPLNSGHGHLIIEGMSYPDQLLWVSDPKKC---IPKRVLDFT-HTWPAL 128
           +++C+   +  +   SG  + +I+ +SY  Q   V + K      P+ + + T H  P  
Sbjct: 67  ELTCDDEEKLPVLGISGEEY-VIKNISYLTQSFQVVNSKASHDPCPRPLNNLTLHRTPFF 126

Query: 129 LRFGPLESTYTYLNCSGTKLDPSVLPMGTSVISCMSGSNHTVVAAFDHEAETKMLERGGE 188
           +    +  T  Y NCS   L+       T  ++C    N +++ +F      K+   G E
Sbjct: 127 VNPSHINFTILY-NCSDHLLE----DFRTYPLTC--ARNTSLLRSFGVFDRKKL---GKE 186

Query: 189 RK-----CEVIERVNAAFWWPEMRYGYEYRHGDEYRHGYYPIDDLSNVFVQLGWDIPSCG 242
           ++     C+ +  V      P +        G  Y      ++ L   FV L W   SC 
Sbjct: 187 KQIASMSCQKLVDV------PVLASNESDVMGMTY------VEILKRGFV-LNWTANSCF 230
The following BLAST results are available for this feature:
BLAST of Spo21363.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902196820|gb|KNA13224.1|4.9e-10398.3hypothetical protein SOVF_1186... [more]
gi|731330737|ref|XP_010676294.1|7.8e-8560.1PREDICTED: RING-H2 finger prot... [more]
gi|604303997|gb|EYU23347.1|2.2e-2631.4hypothetical protein MIMGU_mgv... [more]
gi|848911338|ref|XP_012854116.1|2.2e-2631.4PREDICTED: putative RING-H2 fi... [more]
gi|747105536|ref|XP_011101044.1|2.2e-2631.3PREDICTED: putative RING-H2 fi... [more]
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BLAST of Spo21363.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R2R6_SPIOL3.4e-10398.3Uncharacterized protein OS=Spi... [more]
A0A0J8CIJ9_BETVU5.4e-8560.1Uncharacterized protein OS=Bet... [more]
A0A022Q3V6_ERYGU1.5e-2631.4Uncharacterized protein (Fragm... [more]
A0A022RIM0_ERYGU9.8e-2632.8Uncharacterized protein OS=Ery... [more]
A0A059DFG9_EUCGR2.4e-2430.4Uncharacterized protein OS=Euc... [more]
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BLAST of Spo21363.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AT21A_ARATH5.2e-1223.2Putative RING-H2 finger protei... [more]
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BLAST of Spo21363.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G53110.14.6e-1928.7RING/U-box superfamily protein[more]
AT2G46495.12.9e-1323.2RING/U-box superfamily protein[more]
AT5G36001.13.9e-1029.6RING/U-box superfamily protein[more]
AT1G18390.21.5e-625.6Protein kinase superfamily pro... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR27009FAMILY NOT NAMEDcoord: 1..249
score: 8.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016573 histone acetylation
biological_process GO:0006364 rRNA processing
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009637 response to blue light
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0008152 metabolic process
biological_process GO:0043132 NAD transport
biological_process GO:0006457 protein folding
biological_process GO:0030154 cell differentiation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0042793 plastid transcription
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006417 regulation of translation
biological_process GO:0006396 RNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0009555 pollen development
biological_process GO:0009058 biosynthetic process
biological_process GO:0046950 cellular ketone body metabolic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0009954 proximal/distal pattern formation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006535 cysteine biosynthetic process from serine
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009812 flavonoid metabolic process
biological_process GO:0048439 flower morphogenesis
biological_process GO:0010227 floral organ abscission
biological_process GO:0009553 embryo sac development
biological_process GO:0006574 valine catabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006811 ion transport
biological_process GO:0009611 response to wounding
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0010117 photoprotection
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0010155 regulation of proton transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0010218 response to far red light
biological_process GO:0006810 transport
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0009744 response to sucrose
biological_process GO:0006468 protein phosphorylation
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0071484 cellular response to light intensity
biological_process GO:0010440 stomatal lineage progression
biological_process GO:0001101 response to acid chemical
biological_process GO:0009725 response to hormone
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0009414 response to water deprivation
biological_process GO:0009409 response to cold
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0051301 cell division
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0000785 chromatin
cellular_component GO:0005777 peroxisome
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009507 chloroplast
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0016740 transferase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0035251 UDP-glucosyltransferase activity
molecular_function GO:0046592 polyamine oxidase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004419 hydroxymethylglutaryl-CoA lyase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009001 serine O-acetyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0020037 heme binding
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0051724 NAD transmembrane transporter activity
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0009055 electron transfer activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo144730.75Barchart | Table
Spo113980.74Barchart | Table
Spo149480.73Barchart | Table
Spo172030.73Barchart | Table
Spo256890.72Barchart | Table
Spo300010.72Barchart | Table
Spo128900.71Barchart | Table
Spo010930.71Barchart | Table
Spo223720.71Barchart | Table
Spo198120.71Barchart | Table
Spo028330.70Barchart | Table
Spo060120.70Barchart | Table
Spo160910.70Barchart | Table
Spo020440.70Barchart | Table
Spo081660.70Barchart | Table
Spo114160.70Barchart | Table
Spo132600.70Barchart | Table
Spo083370.70Barchart | Table
Spo130900.70Barchart | Table
Spo259530.70Barchart | Table
Spo244900.69Barchart | Table
Spo047540.69Barchart | Table
Spo094120.69Barchart | Table
Spo120050.69Barchart | Table
Spo128890.69Barchart | Table
Spo143460.69Barchart | Table
Spo212470.69Barchart | Table
Spo216170.69Barchart | Table
Spo230780.69Barchart | Table
Spo256480.69Barchart | Table
Spo072370.68Barchart | Table
Spo194440.68Barchart | Table
Spo159900.68Barchart | Table
Spo119410.68Barchart | Table
Spo084670.68Barchart | Table
Spo043910.68Barchart | Table
Spo081680.68Barchart | Table
Spo148520.67Barchart | Table
Spo003140.67Barchart | Table
Spo112010.67Barchart | Table
Spo082890.67Barchart | Table
Spo211940.67Barchart | Table
Spo157070.67Barchart | Table
Spo229210.67Barchart | Table
Spo102380.66Barchart | Table
Spo152930.66Barchart | Table
Spo067190.66Barchart | Table
Spo168080.66Barchart | Table
Spo171970.66Barchart | Table
Spo055080.66Barchart | Table
Spo173450.66Barchart | Table
Spo048970.66Barchart | Table
Spo006600.66Barchart | Table
Spo267900.66Barchart | Table
Spo230440.66Barchart | Table
Spo281460.66Barchart | Table
Spo000500.66Barchart | Table
Spo252520.66Barchart | Table
Spo114410.66Barchart | Table
Spo105350.65Barchart | Table
Spo136430.65Barchart | Table
Spo219550.65Barchart | Table
Spo252760.65Barchart | Table
Spo182380.65Barchart | Table
Spo046730.65Barchart | Table