Spo25468.1 (mRNA) | SpinachBase

Overview


Name	Spo25468.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Eukaryotic protein of unknown function (DUF872)
Location	SpoScf_00825 : 250714 .. 255509 (+)
Sequence length	1577

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTATGTCCAAGTAAAACTCGTAAAACTTGTTCTGAATCTCGAAAAGATAGACTTTCTCGTTGAACTAGTGGTACTGTATACCAGACTTCTGATCAAAGGCAATAAACTCTGAATAACTAGTCTAACTAACTACGCAACAATAACCAGAAACTTTATCTTCTTCTTCTCTCTAAAAAAATCCCCCTTTTGTTATCTTCATCATCGTCTCCCACTCTCGTCGTCGTCACCACCACCACCACCACCACCACTGACACAGGAAACGTTTCATCATCTGCAACATCAACAATTTCGAAGCTCGCAAGAAGTGTTTGTTAACAATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGTATTAACCCTAACCCTAAATTTATAATTTATTTACTGTTTTTAATTCGGATTGTTTTGAATTTTTCTTGGTATTCATGAAATTTGTTTAATTGAGACTGAAATTTGTTTAATTTTTTATTTATTTTGTGTCTATTAATCTTAACCCTAATTCGTTTATTTCATCGAATGCCTCTTTCAATTTGATTTTTTTTTTGTTGAAATTGAAACAGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAAAGGTCGAATGTTAGATTTAATACTCTACTTGATGTGTTTTCTGTACATAGAAATGGATTAGTGATCAAAAGAAATGAAATATCACCTTTGTTTCTAGTTGACAACTGTTATTGTTGGTATTTCTTTTGTGGAGAGGTGATGTGGTGTTGGTGTTAAGGTGTTTTTATTCCGTGCTGTGATCTCGAATAATCCGCGTCCTGTTATGTAGTGATGTTGTGGACTTGCTTGAGATTTCACAATGTGAAGGATGTAATTGTTTCTTGTGTATCCGACTATCCACGGATTTAAATCAGCCTCTTTTGTGGTTTTAATGAAATTTCTGTGTACTTAGTGTTCCGTTTTATGCAGTGTGATGCTTACTCACTTCAATATATGCTTCTTTTAGCCTTGATTTTATCTCGCCTTTTTTTATTCCTCAATGGTTTTTTTTCCTCTTGAAGAGGTATGGGAGGTTCTCAGATTGCCATAATCGAAAATGTTCTCTGTTTCGAGTAGTACTCTTCACTAGTGTTTTCTTTTCAAGCTATCTTATTTACTTTTGTATTCAAGTTGTATGTTTATTTTGGATATGTTTTATCTGAGCTAGAAAACGATGAGAACATAGAATTTTGAAGTGCTAGCCTTTAGCTTGTAGTTAATCTTTGAAGCTTGAAACATTCTCGTTGATTATATCATTTTAATTTCCCAATCTGTGTTATGGGGATCTTCATTTATCTCATGTAGGTGTGTTGGACCCTTGAGACTCTAACATGGGTATTGACACCTTGCCACTTCTTTTGGGACCAAAACCATGGATCAATTAACATTCGGACAGGTACCCGTGGCCGATTTAAGGTCCCTAATTTGAAGTAACATAGGTCATCTTAGGGTTGGCATGTGAGTCATCAGTCTACTCCAAAGCAATGCTCTTTAATTGCCAGAGTACGATTTTGTTATGTATTTTATGATTTAAACCAAATCCTCCATCCTTGGAAATATGCCTTTGCAGTTTCTGTCTTCTCCATCAGGCTAGTCATATAATGTATTTTTTTTGGATATGAGTGCTACCTTGTTTAGGCATAACACATATTTTTTCTTCATCTCATACTTTTGTGAATGATGTGATCCTGCGAGCAGAACATAGCTAGATTCACTACTATGAGCATCCACCAGAAGTTGAAAATAGGGACTGGTATTAAACTATTGCCCGGAGTTGCATTTTCGGGATCGTCCCTTTTTCCACTAGTAGAACAAAGCTTGTATGAGCGAGCCTCTATGCTCATGCTAGCCTCAGCAGTCAGCACTATGATAGCTGCTTTAGCCTTTAAAATTTTAGATGATACGAAGTAACTAGAAATCGATTTAAAGCTGGTTCCTAGTTGGGCTAAGAGTTTGATCTTTCATTTCTGTTCCTAATTCCTATACTACCCACTTTTAACCTTTAATATATCATTTGTTTTGAAGCTTGTACTTATCACCCACCTGATAAAGAGGCGATGTAGGATTCTGGTCACAATTGAGGACTCTGTTTATGCAGTATTGACTTTATGGTCTTATTTAACATGAAGACTCCACACTATTACTTATAGACAGCATGTTTGGGGTTTACAGCTGAAGCTTTGGATGAAAGTTCCTTTCTTGGAAATTTCATTTCTCACAATATTAGGCTTATAGGTCATTATGGTCTACTGTCAACTTTGAGTTGCTTGTGAAACTCCTAAGCCTAGGAATGCTAGATGTAGAAGACTGATAATTTGGTGGTTTTGAAGTGGTGCTACTCTTTCAGGTTTGTTTTGGATATGATTCATGATTATGTAATGTGTGATTGGCAGTTAGATGGCTATGTCTTTCCATCTACTTTCGTTATATACGTGTCCTCTTGTTTTGCCCGCTTCCCTTTTTTTGGTGTATACCTCTCTTAAAACAATACTACTACGGTTGAACTGGGATGTCCGTAGGTGATAAGTTAATTCCTTCAGCTAATCAGAAGCACCGATTATCTGTTTTGGTTTTCTATTATCATCGGAAGGAAGGTTTCATTCAAATCGATGTTTTTCGTTTCATACATGCCTTTGTAGTGGAAAACCTGCCTTTTTTAAATTGTAAGCATGCAATAATAGTGAGAGCTGTACATGTCATTTCTTCTTGCATTACTTACTGTTGTCGAGGTAATTGAAGAAAGATATCAATTTAAGACCCATGCCTTGAAGAATTGGCAATTTTGCATTATGTTTTGATCTTAGTAGAAGGGTTAAAATCAAAGATGTAACTATGTTGAGTCCACAATGACCTACCCTAGTGTTTCTGAAGCCTGAAGACGAGATCTTTTCCAGAGGCGAAGAGAAAATTTGTTGTGACGAGACAAACCTGGTTAGGAAAAGAAACAGAAACAAGATAAAGAGAATGAACCATTTGTAAGTTTTTGATCATCTTGCACTGTAATTACCCGTATTAAGCTCGTAACCTACTCCTTTTTTAAGGTTGCAAGAGTAATTAAGTTCTTTTACGCTCTTTTTCCATATATAGTTGATGGTCTGAAAGAGTTTGACCCAAGCTCTTGTCTCTGTTTCCATGGAAAAAGCTGCACATTGTTATCAGTATGTTGTCTGTCCATCTGCATTATTAAGAATATCTTCTCTGGAAACATCAGTTTTAGGATATTTTGGTAAGTTTCGCCGAGGATAGGTGGGCAAGTATGATGCTTTTAATGTACTGTGCATGGTAATTAGGTGGTTTACAGAATTGTTATCAGCATTACTGTGATTAAATCCGGAAAAGACTAGCTTTTGGTGAGTATTAGGTGGATCCACTATATGAACTCCTTTGAACTGCTTGATTATTAATTTATTATGTTCCTCGTTTGCATGTGCTAGGTTAGTGTTCCATTCATATTATTTGTTGGAAAGACTAACATCAAACATGATTTCGATATTGCTTTTGTTTTTGTTGCTGTGAACTTCCTTTACCCGTGTTTTGCAACTTCTTCCGTCTGGTTGGTCTTTTCACTGCTGGTAATATAATGCACTCACAGGTCTTGGAGAGCAAACTAGCAGAACACGCCTGATTCATAAGGTAATCCTTTTTGTTCTGCTGTGTTCTTCCCCTTCGCCTTACCCCCTTCTGAGAACAATTACACTTGATGTGTGATGAATTATGCATTCTCCTCCTTTTTGTTCTGTTGAGGGCCGGGTTGGGCTCCCACGGCCCAATGGGCCTGACCCACCCAAGCCCGTTTGGAACGGGAGGCACGGCCGCGTGCCCTCTTGCTGGGTCGGGCCTAGACCATGGTAGTCCTTTTCTGTTAGAACAATTACACTTGACTGTCACATTCTCCTTTTTGTCTCAACGCATCATGCTACGGCAAAGATGATTGTGGGCCGGGTCGGGCTCCCGCTGCCCAGTGGGCCTGGCCCACCCAAGCCCACTTGGAACGGGAGGCACGGCCGCGTGCCCTCGTGCTGGGTCGGGCCTAGCCCCACGGTAATCCTTTTTGTTCTGCTGTGTCTTCCCTTTTGCCCACCCCCTTCTGAGAATTATGCATTCTCCTTCTTTTTGTCTCAATGCATCATGCTACAGCAAAGATGGTTGTGGGCCTGGTCGGGCTTCAGGCCTATCCCATGGCCCAATGGGCCTGACCTATGCTGAGCCCGCTTGGGACGGGAGGCATGGCCGCGTGCCCTTTTACTGGGTCGGACCTAGCCCACGGTAATCCATTTTGTTCTGCTGTACTCTTCCCTTTTGCCTACCCCCTTTTTCTCCTTAATCCTTATGCTTGGTTTAGGGTTTCCTTTCGATCCAGAGTCTTCAACTCATTCTCCTCCGTTTAACCGGTTTGCCACTTTGCCGTGAACGGATCGACATCGAATCTTTTAGTAGGGATAGTCTGTGATTTGCATGTTCTCGACCCAAGTTCTTTCCACCGATGTTTAGATTATGAACCTTCTGTCGTCTTCCAGATTCCGAAACCACTTGTG

mRNA sequence

TAATTATGTCCAAGTAAAACTCGTAAAACTTGTTCTGAATCTCGAAAAGATAGACTTTCTCGTTGAACTAGTGGTACTGTATACCAGACTTCTGATCAAAGGCAATAAACTCTGAATAACTAGTCTAACTAACTACGCAACAATAACCAGAAACTTTATCTTCTTCTTCTCTCTAAAAAAATCCCCCTTTTGTTATCTTCATCATCGTCTCCCACTCTCGTCGTCGTCACCACCACCACCACCACCACCACTGACACAGGAAACGTTTCATCATCTGCAACATCAACAATTTCGAAGCTCGCAAGAAGTGTTTGTTAACAATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAAAGGTCTTGGAGAGCAAACTAGCAGAACACGCCTGATTCATAAGGTAATCCTTTTTGTTCTGCTGTGTTCTTCCCCTTCGCCTTACCCCCTTCTGAGAACAATTACACTTGATGTGTGATGAATTATGCATTCTCCTCCTTTTTGTTCTGTTGAGGGCCGGGTTGGGCTCCCACGGCCCAATGGGCCTGACCCACCCAAGCCCGTTTGGAACGGGAGGCACGGCCGCGTGCCCTCTTGCTGGGTCGGGCCTAGACCATGGTAGTCCTTTTCTGTTAGAACAATTACACTTGACTGTCACATTCTCCTTTTTGTCTCAACGCATCATGCTACGGCAAAGATGATTGTGGGCCGGGTCGGGCTCCCGCTGCCCAGTGGGCCTGGCCCACCCAAGCCCACTTGGAACGGGAGGCACGGCCGCGTGCCCTCGTGCTGGGTCGGGCCTAGCCCCACGGTAATCCTTTTTGTTCTGCTGTGTCTTCCCTTTTGCCCACCCCCTTCTGAGAATTATGCATTCTCCTTCTTTTTGTCTCAATGCATCATGCTACAGCAAAGATGGTTGTGGGCCTGGTCGGGCTTCAGGCCTATCCCATGGCCCAATGGGCCTGACCTATGCTGAGCCCGCTTGGGACGGGAGGCATGGCCGCGTGCCCTTTTACTGGGTCGGACCTAGCCCACGGTAATCCATTTTGTTCTGCTGTACTCTTCCCTTTTGCCTACCCCCTTTTTCTCCTTAATCCTTATGCTTGGTTTAGGGTTTCCTTTCGATCCAGAGTCTTCAACTCATTCTCCTCCGTTTAACCGGTTTGCCACTTTGCCGTGAACGGATCGACATCGAATCTTTTAGTAGGGATAGTCTGTGATTTGCATGTTCTCGACCCAAGTTCTTTCCACCGATGTTTAGATTATGAACCTTCTGTCGTCTTCCAGATTCCGAAACCACTTGTG

Coding sequence (CDS)

ATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAA

Protein sequence

MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGDRAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25468	Spo25468	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25468.1	Spo25468.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25468.1.exon.1	Spo25468.1.exon.1	exon
Spo25468.1.exon.2	Spo25468.1.exon.2	exon
Spo25468.1.exon.3	Spo25468.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25468.1.utr5p.1	Spo25468.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25468.1.CDS.1	Spo25468.1.CDS.1	CDS
Spo25468.1.CDS.2	Spo25468.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25468.1.utr3p.1	Spo25468.1.utr3p.1	three_prime_UTR
Spo25468.1.utr3p.2	Spo25468.1.utr3p.2	three_prime_UTR

Homology

[Close]

BLAST of Spo25468.1 vs. NCBI nr
Match: gi|902151251|gb|KNA05498.1| (hypothetical protein SOVF_189790 [Spinacia oleracea])

HSP 1 Score: 205.7 bits (522), Expect = 3.900e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. NCBI nr
Match: gi|731367784|ref|XP_010695798.1| (PREDICTED: transmembrane protein 230-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 193.0 bits (489), Expect = 2.600e-46
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDN+YAINNKPPI+EIALAVSLLVFGV+GIVLGI MA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. NCBI nr
Match: gi|743816104|ref|XP_011020094.1| (PREDICTED: transmembrane protein 230-like [Populus euphratica])

HSP 1 Score: 185.3 bits (469), Expect = 5.500e-44
Identity = 89/103 (86.41%), Postives = 98/103 (95.15%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDED+M++ +YA+NNKPPIKEIALAVSLLVFGVVGIVLGIFM  N VGGD
Sbjct: 1   MAYVDHAFSITDEDLMVETSYAVNNKPPIKEIALAVSLLVFGVVGIVLGIFMTCNSVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAY+AYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. NCBI nr
Match: gi|661893196|emb|CDP03005.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 183.7 bits (465), Expect = 1.600e-43
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DEDIMMD  Y +NN+PPIKEIALAV+LLVFG +GIVLG+ MAVN VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. NCBI nr
Match: gi|747047901|ref|XP_011069937.1| (PREDICTED: transmembrane protein 230-like [Sesamum indicum])

HSP 1 Score: 183.3 bits (464), Expect = 2.100e-43
Identity = 88/103 (85.44%), Postives = 97/103 (94.17%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMM+ +Y++NNKPPIKEIALAV+LLVFGV+GIV GI MA+N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMETSYSVNNKPPIKEIALAVALLVFGVLGIVFGIIMAINQVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG FFAILG +LFLPGFYYTRIAYYAYKGYKGFSF+NIPPV
Sbjct: 61  RAHGTFFAILGGLLFLPGFYYTRIAYYAYKGYKGFSFANIPPV 103

[Close]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFP1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189790 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.700e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E2T6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155360 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.800e-46
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDN+YAINNKPPI+EIALAVSLLVFGV+GIVLGI MA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A068U364_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041466001 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.100e-43
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DEDIMMD  Y +NN+PPIKEIALAV+LLVFG +GIVLG+ MAVN VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A9PGK0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.500e-43
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDED+M++ +YA+NNKPPIKEIALA+SLLVFGV GIVLGIFM  N VGGD
Sbjct: 1   MAYVDHAFSITDEDLMLETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAY+AYKGY GFSFSNIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: B9SX69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0548540 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.500e-43
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITD+D+M++ +Y +NN+PPIKEIALAV+LLVFGV GIVLGIFM VN +GGD
Sbjct: 1   MAYVDHAFSITDDDLMLETSYVVNNRPPIKEIALAVALLVFGVTGIVLGIFMTVNRIGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAYYAYKGYKGFSF+NIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYYAYKGYKGFSFANIPPV 103

[Close]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_CHICK (Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.000e-10
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1

		  
Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALAV L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116

[Close]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_BOVIN (Transmembrane protein 230 OS=Bos taurus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.900e-10
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1

		  
Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116

[Close]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_PONAB (Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.900e-10
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1

		  
Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116

[Close]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_HUMAN (Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-9
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1

		  
Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116

[Close]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_MOUSE (Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-9
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1

		  
Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116

[Close]

BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 174.1 bits (440), Expect = 4.500e-44
Identity = 81/103 (78.64%), Postives = 93/103 (90.29%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIM++ +Y +NN+PP+KEIALAV+LLVFG +GIV G FMA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

[Close]

BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 166.4 bits (420), Expect = 9.300e-42
Identity = 77/103 (74.76%), Postives = 91/103 (88.35%), Query Frame = 1

		  
Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DED+M+  +Y ++N+PP+KEI+LAV LLVFG +GIVLG FMA N VGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

[Close]

BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 70.9 bits (172), Expect = 5.300e-13
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 1

		  
Query: 12  DEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGDRAHGMFFAILG 71
           D D   D +    ++ P K IALAV LL  G + ++L  F+ + H+ GD + G    +LG
Sbjct: 30  DFDPRFDYSPKAFDRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLG 89

Query: 72  AILFLPGFYYTRIAYYAYKGYKGFSFSNIP 102
            + FLPGFY TRIAYY+++G +G+ F+ IP
Sbjct: 90  ILTFLPGFYETRIAYYSWRGAEGYRFAAIP 119

The following BLAST results are available for this feature:

BLAST of Spo25468.1 vs. NCBI nr
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
BLAST of Spo25468.1 vs. TAIR (Arabidopsis)

BLAST of Spo25468.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902151251\|gb\|KNA05498.1\|	3.9e-50	100.	hypothetical protein SOVF_1897...	[more]
gi\|731367784\|ref\|XP_010695798.1\|	2.6e-46	92.2	PREDICTED: transmembrane prote...	[more]
gi\|743816104\|ref\|XP_011020094.1\|	5.5e-44	86.4	PREDICTED: transmembrane prote...	[more]
gi\|661893196\|emb\|CDP03005.1\|	1.6e-43	86.4	unnamed protein product [Coffe...	[more]
gi\|747047901\|ref\|XP_011069937.1\|	2.1e-43	85.4	PREDICTED: transmembrane prote...	[more]

BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QFP1_SPIOL	2.7e-50	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8E2T6_BETVU	1.8e-46	92.2	Uncharacterized protein OS=Bet...	[more]
A0A068U364_COFCA	1.1e-43	86.4	Uncharacterized protein OS=Cof...	[more]
A9PGK0_POPTR	5.5e-43	83.5	Putative uncharacterized prote...	[more]
B9SX69_RICCO	5.5e-43	81.5	Putative uncharacterized prote...	[more]

BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
TM230_CHICK	4.0e-10	46.8	Transmembrane protein 230 OS=G...	[more]
TM230_BOVIN	8.9e-10	45.5	Transmembrane protein 230 OS=B...	[more]
TM230_PONAB	8.9e-10	45.5	Transmembrane protein 230 OS=P...	[more]
TM230_HUMAN	1.5e-9	45.5	Transmembrane protein 230 OS=H...	[more]
TM230_MOUSE	1.5e-9	45.5	Transmembrane protein 230 OS=M...	[more]

BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT4G29850.1	4.5e-44	78.6	Eukaryotic protein of unknown ...	[more]
AT2G19350.1	9.3e-42	74.7	Eukaryotic protein of unknown ...	[more]
AT3G29170.1	5.3e-13	42.2	Eukaryotic protein of unknown ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Protein of unknown function DUF872, transmembrane	PFAM	PF05915	DUF872	coord: 28..101 score: 3.2
None	No IPR available	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..102 score: 6.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane