Spo03736 (gene)

Overview
NameSpo03736
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00131 : 476627 .. 477664 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTATAGGAATGTAGAAGTGTAAAATGTTGGCAGTAGTCGTACTTAAGTTACTCCAATTTAACAGCATTTACATAAAAAGCAGAGCTTTTTCTGCTACAAATTATTTTCTCCACCCACATACCAAACCAATCCTCTTTTAATTCCTTCATTTTTTAATTCAATTTTATTTTTTATTTAAAAACAAAAAAAAAAAAAGTAAGAAAAAAGAGTCCAACAGAAAAAGGTAGAGGAGAGAGAAACTAGAGAAAATGGGGGATCATGCAAACCCACACCCAAACTGGTCGTCGATTCATCTTCTCCACATCCTCACTTCTTCTGCTTCTTCTTCTTCTTCCTCCCCAATTTCTCTGTTTTTTTAGGGTTTCACACTACTTCACTTTTCTGCCGGCTCTTGCTCTCACTAGGTATTTCATTTCATTTTATTTAATTTAATTTTTATTGTATCTTTCCGTCTCTCTTTATGTGCTTTATTTCATAATTCAATTTCTGTCGCCTTAATTCTAGGGTTTCTCCCTTTTTTGCTTTTGTTGCTGCTGATCTCGATGTAATTCCATGTTTTTTTTTAACTTTTTTTTTGATTGTTAGTTATATTACTTTATTTTAGTTGCTACTGTTTGTTTTGGTGATTACTCAATCCTTCTTTTATGATTTTTCAATTGAATTTTGGTGTGCTTTATTCTGTTTGATATAATAAAATGTGTTCAGTTTTTGTTTGAATTGTACTGATGAATTGAAATGATTTCTCAATATTTCGTCATTTTTTTTTAATTTTTTAATTTTTATATACCGAAGTAGGATTTTGTCTTGTTTTTTATGGAATAGGGTTTTTGCTGAATCTTTGTTTTTAGAGCTACTATAACCTTTAATTGGTGGTAGAAAAGATGGAAATTTTAGATTTTGATTTTTCTGAAATTTAATGCACTACTTTATTAATGTTCTAATTGATTGTTTTAGGTTAGATTCAGCAAGTGCTGCACAGTCAACTGGGAGTAAGAAGATAGTGACTGTTGATTTATTTGTTGTTAGAGAGGAGTAG

mRNA sequence

GGGTATAGGAATGTAGAAGTGTAAAATGTTGGCAGTAGTCGTACTTAAGTTACTCCAATTTAACAGCATTTACATAAAAAGCAGAGCTTTTTCTGCTACAAATTATTTTCTCCACCCACATACCAAACCAATCCTCTTTTAATTCCTTCATTTTTTAATTCAATTTTATTTTTTATTTAAAAACAAAAAAAAAAAAAGTAAGAAAAAAGAGTCCAACAGAAAAAGGTAGAGGAGAGAGAAACTAGAGAAAATGGGGGATCATGCAAACCCACACCCAAACTGGTCGTCGATTCATCTTCTCCACATCCTCACTTCTTCTGCTTCTTCTTCTTCTTCCTCCCCAATTTCTCTGTTTTTTTAGGGTTTCACACTACTTCACTTTTCTGCCGGCTCTTGCTCTCACTAGGTTAGATTCAGCAAGTGCTGCACAGTCAACTGGGAGTAAGAAGATAGTGACTGTTGATTTATTTGTTGTTAGAGAGGAGTAG

Coding sequence (CDS)

ATGCAAACCCACACCCAAACTGGTCGTCGATTCATCTTCTCCACATCCTCACTTCTTCTGCTTCTTCTTCTTCTTCCTCCCCAATTTCTCTGTTTTTTTAGGGTTTCACACTACTTCACTTTTCTGCCGGCTCTTGCTCTCACTAGGTTAGATTCAGCAAGTGCTGCACAGTCAACTGGGAGTAAGAAGATAGTGACTGTTGATTTATTTGTTGTTAGAGAGGAGTAG

Protein sequence

MQTHTQTGRRFIFSTSSLLLLLLLLPPQFLCFFRVSHYFTFLPALALTRLDSASAAQSTGSKKIVTVDLFVVREE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03736.1Spo03736.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo03736.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo03736.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo03736.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo03736.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009790 embryo development
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0035970 peptidyl-threonine dephosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0071482 cellular response to light stimulus
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009249 protein lipoylation
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006897 endocytosis
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0005777 peroxisome
cellular_component GO:0005681 spliceosomal complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0047617 acyl-CoA hydrolase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo119610.76Barchart | Table
Spo270040.75Barchart | Table
Spo271020.75Barchart | Table
Spo050930.75Barchart | Table
Spo130290.74Barchart | Table
Spo050730.74Barchart | Table
Spo248570.74Barchart | Table
Spo210670.73Barchart | Table
Spo089700.73Barchart | Table
Spo069490.73Barchart | Table
Spo140870.73Barchart | Table
Spo012610.72Barchart | Table
Spo192450.72Barchart | Table
Spo169110.72Barchart | Table
Spo018580.72Barchart | Table
Spo088500.72Barchart | Table
Spo172090.71Barchart | Table
Spo205440.71Barchart | Table
Spo216910.71Barchart | Table
Spo022800.71Barchart | Table
Spo064730.71Barchart | Table
Spo149420.70Barchart | Table
Spo026430.70Barchart | Table
Spo092900.70Barchart | Table
Spo089690.70Barchart | Table
Spo018400.70Barchart | Table
Spo099930.70Barchart | Table
Spo270620.70Barchart | Table
Spo117330.70Barchart | Table
Spo021070.69Barchart | Table
Spo121070.69Barchart | Table
Spo103160.69Barchart | Table
Spo229550.69Barchart | Table
Spo158730.69Barchart | Table
Spo024840.69Barchart | Table
Spo144160.69Barchart | Table
Spo108150.69Barchart | Table
Spo109230.69Barchart | Table
Spo071840.69Barchart | Table
Spo020100.69Barchart | Table
Spo003440.69Barchart | Table
Spo040820.68Barchart | Table
Spo173180.68Barchart | Table
Spo173860.68Barchart | Table
Spo185750.68Barchart | Table
Spo198500.68Barchart | Table
Spo220280.68Barchart | Table
Spo225290.68Barchart | Table
Spo018410.68Barchart | Table
Spo019290.68Barchart | Table
Spo057310.68Barchart | Table
Spo059550.68Barchart | Table
Spo062940.68Barchart | Table
Spo089990.68Barchart | Table
Spo270810.68Barchart | Table
Spo109400.68Barchart | Table
Spo122020.68Barchart | Table
Spo013570.68Barchart | Table
Spo140080.68Barchart | Table
Spo140960.68Barchart | Table
Spo268340.68Barchart | Table
Spo258760.68Barchart | Table
Spo156390.68Barchart | Table
Spo158810.67Barchart | Table
Spo069620.67Barchart | Table
Spo179590.67Barchart | Table
Spo199650.67Barchart | Table
Spo236750.67Barchart | Table
Spo142250.67Barchart | Table
Spo227600.67Barchart | Table
Spo144540.67Barchart | Table
Spo242870.67Barchart | Table
Spo112960.67Barchart | Table
Spo110980.67Barchart | Table
Spo030190.67Barchart | Table
Spo096050.67Barchart | Table
Spo268110.67Barchart | Table
Spo123640.67Barchart | Table
Spo087720.67Barchart | Table
Spo235880.66Barchart | Table
Spo013560.66Barchart | Table
Spo015310.66Barchart | Table
Spo031960.66Barchart | Table
Spo036080.66Barchart | Table
Spo041360.66Barchart | Table
Spo049080.66Barchart | Table
Spo049960.66Barchart | Table
Spo051350.66Barchart | Table
Spo057280.66Barchart | Table
Spo059280.66Barchart | Table
Spo060040.66Barchart | Table
Spo066810.66Barchart | Table
Spo067290.66Barchart | Table
Spo079590.66Barchart | Table
Spo104210.66Barchart | Table
Spo104730.66Barchart | Table
Spo133730.66Barchart | Table
Spo158650.66Barchart | Table
Spo175780.66Barchart | Table
Spo179400.66Barchart | Table
Spo230710.66Barchart | Table
Spo236640.66Barchart | Table
Spo245660.66Barchart | Table
Spo104270.65Barchart | Table
Spo002830.65Barchart | Table
Spo064650.65Barchart | Table
Spo170320.65Barchart | Table
Spo154200.65Barchart | Table
Spo282650.65Barchart | Table
Spo149800.65Barchart | Table
Spo252300.65Barchart | Table
Spo148810.65Barchart | Table
Spo147790.65Barchart | Table
Spo146670.65Barchart | Table
Spo139410.65Barchart | Table
Spo121550.65Barchart | Table
Spo197010.65Barchart | Table
Spo228110.65Barchart | Table
Spo173290.65Barchart | Table