Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATTAAACTACCAAAAATTTCAGGTACTTACCAAACTACTTCTACCAAACAAACAATATAAACAACTATCTTATCAGTTTCAGGTACTACCTTATCAGTTTCAGTTGTCTTATTAGTTTCAGCTCAATTTCAGCTAGTGTTGCCAAACATAGCCTTAATTTTGTAAGGTCAAGTTAAAATTTGACAATATAAAAATCAAATATTACAGTGGGAATTGGGTTAGTAGGATTCACTTATTGAAGTCAAAAAGCCCTAGATCTTTTTTGGCCCAAAACACCTCAATCCTGAACCAAACAGAGCTCGTGATCGATCAATAACTTTAACTCGCCGGTAACTGCGTCCTCGTCGGCGATAACATCTTCAAGCTCCGGCAATCTCCATTTTTGAACTTTTGAGATCAATTGGAGGAAATACCGAAGTTAAGAAGAGAGAGAAAAGGGAGAATTTCGCAGAATCTTCAACTATGTCATTTCATATACTATCTAGAAGAATCTTGCCTCATGTATTCAAGCACAATACGCAATTCCCCAATTCTCATTTCCAGTAAGTATCTCGCTAATTCAAGCTTTGTATCTCATTTCTAGAACCTAGAATCATCTTAATTGGATTTTATTGATTTTGGTATAGGAAATTATTGCAATCAATTGGACCTAGTAGTTATGAAATTAGACGAGGATTTAGATATATTTCACGGCCAATCACCAGGAATTGTCAATTGTCTGCTTGTAATCCTCATATTATTGTTCAAAGATATCGCCTCGCGGCTTCCGAGCCAAGGCGTAACTATGCATCGTCCACTACTGTTGTTCAAGAGAAGAAGTCACAAAAGATGTTGATATATTTGACTGCCTTGGTTTTCGGAATGGTGGGATGTTCATATGCTGCTGTCCCCTTGTATAGGAGATTCTGCCAAGCTACTGGTTATGGTGGTACTGTTCAACGTCGGGAGGTGAGACTTGTTCATATCTCATATATATGTTGATTTATGATTCGGGGAATAATAGTCTCCTATATTACTTTGGCATTTCCGGAACGGAATAGTGCTAAACCGTAGATACACATGTATAGGATTTTCTTAGCAGTTGGCAGTGGCAGTAGAAATAGTTGCAAGACAAACAATTAGATACTCTTTATTTGTTCAGGTATGTCAAGGGTTTGAGTGATAATTAGTTCTTTCCAAGCTTCCATTGCTCAGTAAATCATGCAAGCTCTGGAGGGTAACTATGGTTGATTTAGCCCAACATGTAAAATTTCTAGGTTAAACGTGTTAAGACATCGTGACGATTATACTCGGGTGGAGTCTTATATTGAAGGTTTTAGTTGTCACATTTTTCCAGATAACAGTATATATTGTGATCAATGTGGGTTAGTAATTTAGTATAGTCTGTATTAAAGGTCAAAAGTTGTCACATTTTAGCTCTTTAAAAGTTCGTGTCGCCACCCCATTCCCTTTTTTGTTTTTTAGATAAAGGTCACTAGCTCTATTTATGCAAGAGTGAGGGGAATACCATTATAATTGAAAATATTGGCTAAATCATCCTTGGTACTTGTATATGGAAAATCAGTTACCTTTCCCCTTGAGTACCTTTTTGAACGATGGGTATAACTTCTTGTGCTAAGTTTCCCTTCATTTTCTGCAGACTGTAGAAGAAAAGATTGCTCGGCATTCACAAGATGGTACTGTCACCAAAAGGTATGGTTGATTCCACACGTAATTTTGTTCTTCTCTGCATCAATGTTTAAGTAATAATTTCTTCTTCATTTTAACCAATAGACGTGGGTCAAAGCATGAAATATATAACTGTGTTAGTAGTATAGAAATGGTAAAAGTAAGTGAGTGAATATTGTGATTTGAATGTTCTGCTTTTGCATTTCTAGTTGTCTGACCTGAATATGGATGTTTTGTATTTCTGACTGTTAAAGTATTCCCTATGAAATGAGGTGTCCATATGCCATGAAGGGTCTTTTCCGCCTCGGGGGAGGGGGGGGGAGGGGGGGAGGGATGTATGATTGCACGTTCTCCATCAAAATCATCTTACGACTTCAGAATTCAGATATCTGCATGTAACCTAAATGTGCTGAGATATCTTCTTAATTAAACACATCATCCAGCAAATTGAAGATTATCTACTTACATGCTAAAGACATCAAAGTTCCTGCTAAAATTTTGAGATAGGAACTGGGGCGTTCCCCCTACTCTTCCAGCTTTTGGCTCTAAATGGTGAACTATCTTTGGCTCTCACTTTGTCGGAATTTAAGCTACCATGGCATTAACAGGCAGTTTCTTACCAACACACCTTTTTCTTAGTTAAAGTCCTTAAAGAGCCTGGATTAAAGTCCTTAGCATAAATTGTTTAGTAGTGAGTAAAAAATTAGAGTAAGATGATCAAAATGTTGTTTGGTCATGTTGGTGGGCTTTCCATGCCAGCAGGACGCCAGGACATGCTTCATGTGGACACAGCATTATAGCAGGCAAAATGACTTTTTATGCTGTATGCTGTAGCTCTTCTACGTGCAAATTCGACCTTTAAGTTTTGTCATGCACTCATGCAGGATCAGGATATCAAATGATGGTTTATGTTATTTTAATGTCACCTCCATAAAAGCACGTAGAGAATTATGTAACTGGATTTTGATGAATTGAGAAAATATAGAGCCTTGAACGAAAAGAGTTCTTTCGCATTAGGTTTCTTTTTCTTTAGCTCATTTCCTTGTTTTTCCACGGATATTTTATTATATCAATCCTTGGTAAAACTTGATGTGAAATAATTAGAGTTTTTATTTTGGGTTCATTGATAAAATTGCATGCTGGTGAAGGTTTGTAAAGTTTTGTCCATAGCTTATTTAAAACTTACCAACTAGCAAGGTGTATCCATGTTTTACCTTCCTGTCCTCTCATCTCTCTGATAATTATAGATCATGAGGCCACATCCCATTTATCTACCTTCAAAAACACATTGAAATCCATTAATATCCCTATCTCTGTTGGAAGATTTTGGCTCAAACTTAACGAACAATTTTCAGAATTATTTTCTTATTTTCATGCGTGTTTCTTGAATGTTTTACAACTTTTCTTTTTGATAAGTCAGTAAAATTCATTATAAAAAAGATTACAACCTAAAGCACAATCAACTCTTTTGTAAACATCTAGGAAGGACCCCAAAAGAGAGAAAAAAGGCTAACCAATTATGAAAACAATCATGAGCTGTACATTTTGTTTTTCCTGCCACCAAATTCTATCACTAGCTCTAAATTTCTGAGGAACTATGCACTTCAATCTATCTGTAAAACTTCTCTGTATGAACTTCACAGTATGATGTACAGTAGAAACTCACTAGTTCCGTAGAGCCTCATTTCGTGTCCTCCATATTGCATAAACAGTAGCTGCATCAACTACTGACATAACTCCCTTCTGGAACTTGCTAGCTTTACTCTTCATTTGAATCCATCTGATTTACATTCTTTTGTTACAGAGAAATTGTGGTTCAATTTAATGCTGATGTTGCTGATGGGATGCAGTGGAAATTTACTCCTACCCAAAGAGAGGTATCCATTTCTTTGAAGTCTGTAAAATTGTGGTTGCAGTATACACTAGCAACATGTAAACTTTTCACTAATCTTTATTCTTGCTGTAGGTGAGGGTTAAACCAGGAGAGAGTGCTTTGGCATTTTACACAGCCGAAAATAAAAGTTCAACTCCTATTGTTGGTGTATCCACGTATAATGTTACACCCATGAAGGTAGAAGTGCCTGATAATGTTTTTCCTTTTCTATTTTTTCTTCTGCAACCCCTTTATCATCTGAGTATACTGTAATACTGTATGCACCTTTTAGCAAACTTTGCATGACAATGTCACTCTGTTGACCGTTTAATTTCTGCACAAAATTATGCATCTGAGAGATAAATGGTTATGCTTGTTACAGGCGGCTGTGTACTTCAACAAAATTCAATGTTTTTGCTTTGAGGAGCAGCGACTTCTTCCTGGAGAGCAGGTTGACATGCCTGTAAGTAGTAACAATTCATATTCATGATCTCTTTTAAACTGTACTTCATAATTTTTTTATTCAATGGCCAATATAGTAATATTGCCAATTTTCATAATCTTATAGGTCTTCTTTTATATCGATCCCGAGTTTGAGACAGATCCTAGAATGGATGGTATCAACAATATAATCCTGTCCTATACATTTTTCAAGGTCTCTGAGGAATAAAAAGGTCAAGTGGATCCTGTCATCCTGCCTAACTGCAAAGTTGCAAATGAATACAAAGTACTACCTTTCTTGCTTCAAGTCGAGTGTGGCTACTTAAGCCCATAAGACATTATCACGGCTTTCCGTTTTGTTGATTAAATCTCTAGAAATAAGTTTTTGGTTTATTACTTTATTCTCATCCGTAACTAGTTGTTTTAGAAGCGGGTAGATTAGACACCAGAGTCCATTAATTCTTGTGTAGAAAATTCACATCATAATTGTTACTGAGATAGATAATTTATTTATTTTATTAATTTTATAGTATAAGAATGAGGTAGATAAATTTGTTTTTTTAATAATTTTATAGTATAAGATGAAAGTTCCTATTGAACTGATATTTCCA ATGTCAATTAAACTACCAAAAATTTCAGCTCCGGCAATCTCCATTTTTGAACTTTTGAGATCAATTGGAGGAAATACCGAAGTTAAGAAGAGAGAGAAAAGGGAGAATTTCGCAGAATCTTCAACTATGTCATTTCATATACTATCTAGAAGAATCTTGCCTCATGTATTCAAGCACAATACGCAATTCCCCAATTCTCATTTCCAGAAATTATTGCAATCAATTGGACCTAGTAGTTATGAAATTAGACGAGGATTTAGATATATTTCACGGCCAATCACCAGGAATTGTCAATTGTCTGCTTGTAATCCTCATATTATTGTTCAAAGATATCGCCTCGCGGCTTCCGAGCCAAGGCGTAACTATGCATCGTCCACTACTGTTGTTCAAGAGAAGAAGTCACAAAAGATGTTGATATATTTGACTGCCTTGGTTTTCGGAATGGTGGGATGTTCATATGCTGCTGTCCCCTTGTATAGGAGATTCTGCCAAGCTACTGGTTATGGTGGTACTGTTCAACGTCGGGAGACTGTAGAAGAAAAGATTGCTCGGCATTCACAAGATGGTACTGTCACCAAAAGAGAAATTGTGGTTCAATTTAATGCTGATGTTGCTGATGGGATGCAGTGGAAATTTACTCCTACCCAAAGAGAGGTGAGGGTTAAACCAGGAGAGAGTGCTTTGGCATTTTACACAGCCGAAAATAAAAGTTCAACTCCTATTGTTGGTGTATCCACGTATAATGTTACACCCATGAAGGCGGCTGTGTACTTCAACAAAATTCAATGTTTTTGCTTTGAGGAGCAGCGACTTCTTCCTGGAGAGCAGGTTGACATGCCTGTCTTCTTTTATATCGATCCCGAGTTTGAGACAGATCCTAGAATGGATGGTATCAACAATATAATCCTGTCCTATACATTTTTCAAGGTCTCTGAGGAATAAAAAGGTCAAGTGGATCCTGTCATCCTGCCTAACTGCAAAGTTGCAAATGAATACAAAGTACTACCTTTCTTGCTTCAAGTCGAGTGTGGCTACTTAAGCCCATAAGACATTATCACGGCTTTCCGTTTTGTTGATTAAATCTCTAGAAATAAGTTTTTGGTTTATTACTTTATTCTCATCCGTAACTAGTTGTTTTAGAAGCGGGTAGATTAGACACCAGAGTCCATTAATTCTTGTGTAGAAAATTCACATCATAATTGTTACTGAGATAGATAATTTATTTATTTTATTAATTTTATAGTATAAGAATGAGGTAGATAAATTTGTTTTTTTAATAATTTTATAGTATAAGATGAAAGTTCCTATTGAACTGATATTTCCA ATGTCAATTAAACTACCAAAAATTTCAGCTCCGGCAATCTCCATTTTTGAACTTTTGAGATCAATTGGAGGAAATACCGAAGTTAAGAAGAGAGAGAAAAGGGAGAATTTCGCAGAATCTTCAACTATGTCATTTCATATACTATCTAGAAGAATCTTGCCTCATGTATTCAAGCACAATACGCAATTCCCCAATTCTCATTTCCAGAAATTATTGCAATCAATTGGACCTAGTAGTTATGAAATTAGACGAGGATTTAGATATATTTCACGGCCAATCACCAGGAATTGTCAATTGTCTGCTTGTAATCCTCATATTATTGTTCAAAGATATCGCCTCGCGGCTTCCGAGCCAAGGCGTAACTATGCATCGTCCACTACTGTTGTTCAAGAGAAGAAGTCACAAAAGATGTTGATATATTTGACTGCCTTGGTTTTCGGAATGGTGGGATGTTCATATGCTGCTGTCCCCTTGTATAGGAGATTCTGCCAAGCTACTGGTTATGGTGGTACTGTTCAACGTCGGGAGACTGTAGAAGAAAAGATTGCTCGGCATTCACAAGATGGTACTGTCACCAAAAGAGAAATTGTGGTTCAATTTAATGCTGATGTTGCTGATGGGATGCAGTGGAAATTTACTCCTACCCAAAGAGAGGTGAGGGTTAAACCAGGAGAGAGTGCTTTGGCATTTTACACAGCCGAAAATAAAAGTTCAACTCCTATTGTTGGTGTATCCACGTATAATGTTACACCCATGAAGGCGGCTGTGTACTTCAACAAAATTCAATGTTTTTGCTTTGAGGAGCAGCGACTTCTTCCTGGAGAGCAGGTTGACATGCCTGTCTTCTTTTATATCGATCCCGAGTTTGAGACAGATCCTAGAATGGATGGTATCAACAATATAATCCTGTCCTATACATTTTTCAAGGTCTCTGAGGAATAA MSIKLPKISAPAISIFELLRSIGGNTEVKKREKRENFAESSTMSFHILSRRILPHVFKHNTQFPNSHFQKLLQSIGPSSYEIRRGFRYISRPITRNCQLSACNPHIIVQRYRLAASEPRRNYASSTTVVQEKKSQKMLIYLTALVFGMVGCSYAAVPLYRRFCQATGYGGTVQRRETVEEKIARHSQDGTVTKREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENKSSTPIVGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQVDMPVFFYIDPEFETDPRMDGINNIILSYTFFKVSEE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo17364.1 vs. NCBI nr
Match: gi|902240588|gb|KNA26021.1| (hypothetical protein SOVF_000090 [Spinacia oleracea]) HSP 1 Score: 550.1 bits (1416), Expect = 2.600e-153 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1
BLAST of Spo17364.1 vs. NCBI nr
Match: gi|731310906|ref|XP_010681297.1| (PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 449.9 bits (1156), Expect = 3.600e-123 Identity = 230/273 (84.25%), Postives = 243/273 (89.01%), Query Frame = 1
BLAST of Spo17364.1 vs. NCBI nr
Match: gi|694328647|ref|XP_009355117.1| (PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 353.6 bits (906), Expect = 3.500e-94 Identity = 191/283 (67.49%), Postives = 218/283 (77.03%), Query Frame = 1
BLAST of Spo17364.1 vs. NCBI nr
Match: gi|702479210|ref|XP_010032743.1| (PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial isoform X1 [Eucalyptus grandis]) HSP 1 Score: 352.1 bits (902), Expect = 1.000e-93 Identity = 175/229 (76.42%), Postives = 192/229 (83.84%), Query Frame = 1
BLAST of Spo17364.1 vs. NCBI nr
Match: gi|727429645|ref|XP_010480954.1| (PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial-like [Camelina sativa]) HSP 1 Score: 351.7 bits (901), Expect = 1.300e-93 Identity = 177/211 (83.89%), Postives = 186/211 (88.15%), Query Frame = 1
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2P1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_000090 PE=3 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 1.800e-153 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7E2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g001350 PE=3 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 2.500e-123 Identity = 230/273 (84.25%), Postives = 243/273 (89.01%), Query Frame = 1
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Match: A0A059AEC6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01628 PE=3 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 7.200e-94 Identity = 175/229 (76.42%), Postives = 192/229 (83.84%), Query Frame = 1
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Match: A0A061GVA1_THECC (Cytochrome c oxidase assembly protein CtaG / Cox11 family isoform 1 OS=Theobroma cacao GN=TCM_041401 PE=3 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 2.100e-93 Identity = 190/280 (67.86%), Postives = 216/280 (77.14%), Query Frame = 1
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Match: A0A061GW59_THECC (Cytochrome c oxidase assembly protein CtaG / Cox11 family isoform 2 OS=Theobroma cacao GN=TCM_041401 PE=3 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 3.600e-93 Identity = 177/227 (77.97%), Postives = 197/227 (86.78%), Query Frame = 1
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Match: COX11_ARATH (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Arabidopsis thaliana GN=COX11 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 9.300e-95 Identity = 170/189 (89.95%), Postives = 177/189 (93.65%), Query Frame = 1
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Match: COX11_HUMAN (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo sapiens GN=COX11 PE=1 SV=3) HSP 1 Score: 205.7 bits (522), Expect = 7.500e-52 Identity = 114/239 (47.70%), Postives = 146/239 (61.09%), Query Frame = 1
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Match: COX11_MOUSE (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Mus musculus GN=Cox11 PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.800e-51 Identity = 107/209 (51.20%), Postives = 133/209 (63.64%), Query Frame = 1
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Match: COX11_BOVIN (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Bos taurus GN=COX11 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 6.300e-51 Identity = 102/196 (52.04%), Postives = 127/196 (64.80%), Query Frame = 1
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Match: COX11_PONAB (Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Pongo abelii GN=COX11 PE=3 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 2.400e-50 Identity = 112/240 (46.67%), Postives = 144/240 (60.00%), Query Frame = 1
BLAST of Spo17364.1 vs. TAIR (Arabidopsis)
Match: AT1G02410.1 (cytochrome c oxidase assembly protein CtaG / Cox11 family) HSP 1 Score: 348.2 bits (892), Expect = 5.300e-96 Identity = 170/189 (89.95%), Postives = 177/189 (93.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo17364.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo17364.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo17364.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo17364.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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