Spo21985 (gene) | SpinachBase

Overview


Name	Spo21985
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Lectin
Location	SpoScf_00297 : 280606 .. 281681 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCACCAAGTCGCCCAGGTTCGAACTCGTTTTGCTAGTATTTCTCTTCTCTATGACTAGAATTCAATCCATTTATCTACTCCTAATACTCTAATTATACATGTTATTAACGTTGTTTTTTTTTTTTTTTCCTGGATTAGCAGAAGCATATGGTTGAACAATATGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCATAAGACATGGCTACATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGGTTAGTGTTATGACTGAGCACCTATAAAAAATTTATATGTTATATTACCTCCGTTCAAAAAGATCTTTACACTTACTATTTGCATGGGCTCTGGTGCAATGTTTGCTCGTTAATATAATCCAATTCTGTATGACAAAAAATTATAAAAAGTTGATATTCATAAAATACATTTCGAAAGTAATTTAACAAGATATCTCATGATAATTTTTAATAGATATAATCGTGAGATTTATGGTCAAAGTTTTGATTGTTAGACACATGCATTTTTCATAGCGTAAAGAACTTAATGAAACAGAGGTAGTACTTCATTATTTTCCATTTTGTTCCTCTAACGTTTTTCTTTTTATATAGATTGTACTCAAGTGTGGTGAAAAGATAACTCAGATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCGTATGGACAAGGAAAGGGAGTCGATTGCCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGACACAACAACTACCTCGAGTCTGTTGGAATTTTTGTCCAGAAGAAGGTACAAATTGTTATTGCAAAAATTTGAAATATATTTGGTTTAAGCTAATATGTACTTGGCTGATTTGTTTTATGTGAAATTATTGATCAGGATTGCCCATGCGCTTAA

mRNA sequence

ATGGCTCACCAAGTCGCCCAGAAGCATATGGTTGAACAATATGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCATAAGACATGGCTACATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATAACTCAGATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCGTATGGACAAGGAAAGGGAGTCGATTGCCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGACACAACAACTACCTCGAGTCTGTTGGAATTTTTGTCCAGAAGAAGGATTGCCCATGCGCTTAA

Coding sequence (CDS)

ATGGCTCACCAAGTCGCCCAGAAGCATATGGTTGAACAATATGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAGGAAGTCATCATAAGACATGGCTACATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGTCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATAACTCAGATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCGTATGGACAAGGAAAGGGAGTCGATTGCCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGACACAACAACTACCTCGAGTCTGTTGGAATTTTTGTCCAGAAGAAGGATTGCCCATGCGCTTAA

Protein sequence

MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGTYTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21985.1	Spo21985.1	mRNA

Homology

[Close]

BLAST of Spo21985.1 vs. NCBI nr
Match: gi|902170609|gb|KNA07866.1| (hypothetical protein SOVF_167930 isoform A [Spinacia oleracea])

HSP 1 Score: 370.9 bits (951), Expect = 1.200e-99
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. NCBI nr
Match: gi|902223762|gb|KNA19569.1| (hypothetical protein SOVF_060350 isoform B [Spinacia oleracea])

HSP 1 Score: 361.3 bits (926), Expect = 9.200e-97
Identity = 162/169 (95.86%), Postives = 168/169 (99.41%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 357.1 bits (915), Expect = 1.700e-95
Identity = 161/169 (95.27%), Postives = 166/169 (98.22%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. NCBI nr
Match: gi|902174416|gb|KNA08411.1| (hypothetical protein SOVF_162610 [Spinacia oleracea])

HSP 1 Score: 355.5 bits (911), Expect = 5.000e-95
Identity = 161/169 (95.27%), Postives = 165/169 (97.63%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIIRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+IVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 354.8 bits (909), Expect = 8.600e-95
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+RHGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSG+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167930 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 8.100e-100
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKW0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 6.400e-97
Identity = 162/169 (95.86%), Postives = 168/169 (99.41%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.200e-95
Identity = 161/169 (95.27%), Postives = 166/169 (98.22%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGGNDCRAKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPB9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_162610 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 3.500e-95
Identity = 161/169 (95.27%), Postives = 165/169 (97.63%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIIRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+IVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.000e-95
Identity = 161/169 (95.27%), Postives = 164/169 (97.04%), Query Frame = 1

		  
Query: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVI+RHGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSG+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 170
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169

[Close]

BLAST of Spo21985.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.300e-13
Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1

		  
Query: 15  GPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGTYTKMFGG---NDCR 74
           GP+G    + +S+   EG  I ++II  G  + ++ F   K   G  +  FGG    D  
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  AKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPR 134
            K +  +    E +T ISGTYG YK+++   TI +L   TNL  + +GP+G+        
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNL--ATYGPFGKASAT---- 423

Query: 135 AFASPCPIDGPVVGVFGRHNNYLESVGIFVQ 163
           +F+ P   +  VVG  GR  +YL+++GIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442

[Close]

BLAST of Spo21985.1 vs. ExPASy Swiss-Prot
Match: GOS9_ORYSI (Protein GOS9 OS=Oryza sativa subsp. indica GN=GOS9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.200e-6
Identity = 47/137 (34.31%), Postives = 62/137 (45.26%), Query Frame = 1

		  
Query: 34  SIKEVIIRHGYIVDAIGFV---------VAKPCGGTYTKMFGGNDCRAKESRIVLKCGEK 93
           S+K V IR G  +DAI F          +A P GG      GGN      + I L   E 
Sbjct: 27  SLKSVTIRSGAAIDAIAFTYIGTDGKEHLAGPWGGG-----GGNP-----TTITLGSQEF 86

Query: 94  ITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPRAFASPCPIDGPVV 153
           +  ISGT+ N         +  LKI TN+       +GQG G     AF+ P    G VV
Sbjct: 87  VKGISGTFTN--------VVTNLKIVTNVTTYN---FGQGGGT----AFSLPLQ-SGSVV 137

Query: 154 GVFGRHNNYLESVGIFV 162
           G FGR    ++S+G++V
Sbjct: 147 GFFGRAGALVDSIGVYV 137

[Close]

BLAST of Spo21985.1 vs. ExPASy Swiss-Prot
Match: GOS9_ORYSJ (Protein GOS9 OS=Oryza sativa subsp. japonica GN=GOS9 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.200e-6
Identity = 47/137 (34.31%), Postives = 62/137 (45.26%), Query Frame = 1

		  
Query: 34  SIKEVIIRHGYIVDAIGFV---------VAKPCGGTYTKMFGGNDCRAKESRIVLKCGEK 93
           S+K V IR G  +DAI F          +A P GG      GGN      + I L   E 
Sbjct: 27  SLKSVTIRSGAAIDAIAFTYIGTDGKEHLAGPWGGG-----GGNP-----TTITLGSQEF 86

Query: 94  ITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPRAFASPCPIDGPVV 153
           +  ISGT+ N         +  LKI TN+       +GQG G     AF+ P    G VV
Sbjct: 87  VKGISGTFTN--------VVTNLKIVTNVTTYN---FGQGGGT----AFSLPLQ-SGSVV 137

Query: 154 GVFGRHNNYLESVGIFV 162
           G FGR    ++S+G++V
Sbjct: 147 GFFGRAGALVDSIGVYV 137

[Close]

BLAST of Spo21985.1 vs. TAIR (Arabidopsis)
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.900e-6
Identity = 27/81 (33.33%), Postives = 39/81 (48.15%), Query Frame = 1

		  
Query: 83  EKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPRAFASPCPIDGP 142
           E +T ++GTYG   Y      I +L   TN     HGPYG+ +G             +G 
Sbjct: 310 EVLTHVTGTYGPLMYMGPN-VIKSLTFRTNR--GKHGPYGEEQGPSFTHQMD-----EGK 369

Query: 143 VVGVFGRHNNYLESVGIFVQK 164
           VVG  GR   +L+S+G+ V +
Sbjct: 370 VVGFLGREGLFLDSIGVHVME 382

The following BLAST results are available for this feature:

BLAST of Spo21985.1 vs. NCBI nr
BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
BLAST of Spo21985.1 vs. ExPASy Swiss-Prot
BLAST of Spo21985.1 vs. TAIR (Arabidopsis)

BLAST of Spo21985.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902170609\|gb\|KNA07866.1\|	1.2e-99	100.	hypothetical protein SOVF_1679...	[more]
gi\|902223762\|gb\|KNA19569.1\|	9.2e-97	95.8	hypothetical protein SOVF_0603...	[more]
gi\|902239194\|gb\|KNA25495.1\|	1.7e-95	95.2	hypothetical protein SOVF_0063...	[more]
gi\|902174416\|gb\|KNA08411.1\|	5.0e-95	95.2	hypothetical protein SOVF_1626...	[more]
gi\|902146535\|gb\|KNA05074.1\|	8.6e-95	95.2	hypothetical protein SOVF_1937...	[more]

BLAST of Spo21985.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QMR1_SPIOL	8.1e-100	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RKW0_SPIOL	6.4e-97	95.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9S169_SPIOL	1.2e-95	95.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QPB9_SPIOL	3.5e-95	95.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QCS4_SPIOL	6.0e-95	95.2	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo21985.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
LEC_PARPC	6.3e-13	33.1	Mannose/glucose-specific lecti...	[more]
GOS9_ORYSI	1.2e-6	34.3	Protein GOS9 OS=Oryza sativa s...	[more]
GOS9_ORYSJ	1.2e-6	34.3	Protein GOS9 OS=Oryza sativa s...	[more]

BLAST of Spo21985.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G19715.3	7.9e-6	33.3	Mannose-binding lectin superfa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001229	Jacalin-like lectin domain	GENE3D	2.100.10.30		coord: 10..162 score: 6.8
IPR001229	Jacalin-like lectin domain	PFAM	PF01419	Jacalin	coord: 37..161 score: 4.
IPR001229	Jacalin-like lectin domain	PROFILE	PS51752	JACALIN_LECTIN	coord: 11..163 score: 12
IPR001229	Jacalin-like lectin domain	unknown	SSF51101	Mannose-binding lectins	coord: 9..161 score: 2.49

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0010072	primary shoot apical meristem specification
biological_process	GO:0010100	negative regulation of photomorphogenesis
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0019915	lipid storage
biological_process	GO:0009880	embryonic pattern specification
biological_process	GO:0006281	DNA repair
biological_process	GO:0048825	cotyledon development
biological_process	GO:0051301	cell division
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0048312	intracellular distribution of mitochondria
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0070933	histone H4 deacetylation
biological_process	GO:0061647	histone H3-K9 modification
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006810	transport
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0035725	sodium ion transmembrane transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0055075	potassium ion homeostasis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006452	translational frameshifting
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0050826	response to freezing
biological_process	GO:0006396	RNA processing
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
biological_process	GO:0048575	short-day photoperiodism, flowering
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0016246	RNA interference
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0048571	long-day photoperiodism
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009611	response to wounding
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0009987	cellular process
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006457	protein folding
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0006096	glycolytic process
biological_process	GO:0061025	membrane fusion
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0043090	amino acid import
biological_process	GO:0007155	cell adhesion
biological_process	GO:0006412	translation
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006869	lipid transport
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0010351	lithium ion transport
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006508	proteolysis
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015696	ammonium transport
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0000932	P-body
cellular_component	GO:0016020	membrane
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0045254	pyruvate dehydrogenase complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0045252	oxoglutarate dehydrogenase complex
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005618	cell wall
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0000118	histone deacetylase complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0015385	sodium:proton antiporter activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0004743	pyruvate kinase activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function	GO:0097372	NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function	GO:0046969	NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function	GO:0046970	NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0008641	ubiquitin-like modifier activating enzyme activity
molecular_function	GO:0003743	translation initiation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21969	0.88	Barchart \| Table
Spo21973	0.82	Barchart \| Table
Spo02470	0.80	Barchart \| Table
Spo21968	0.78	Barchart \| Table
Spo21984	0.76	Barchart \| Table
Spo24775	0.76	Barchart \| Table
Spo25306	0.75	Barchart \| Table
Spo24916	0.75	Barchart \| Table
Spo18221	0.75	Barchart \| Table
Spo21982	0.74	Barchart \| Table
Spo23966	0.74	Barchart \| Table
Spo21406	0.74	Barchart \| Table
Spo09711	0.74	Barchart \| Table
Spo14267	0.74	Barchart \| Table
Spo09855	0.74	Barchart \| Table
Spo24936	0.74	Barchart \| Table
Spo02993	0.74	Barchart \| Table
Spo21077	0.74	Barchart \| Table
Spo24839	0.73	Barchart \| Table
Spo23622	0.73	Barchart \| Table
Spo02105	0.73	Barchart \| Table
Spo25100	0.73	Barchart \| Table
Spo16378	0.73	Barchart \| Table
Spo19394	0.73	Barchart \| Table
Spo21082	0.73	Barchart \| Table
Spo21818	0.73	Barchart \| Table
Spo22139	0.72	Barchart \| Table
Spo01478	0.72	Barchart \| Table
Spo13818	0.72	Barchart \| Table
Spo05232	0.72	Barchart \| Table
Spo05114	0.71	Barchart \| Table
Spo06317	0.71	Barchart \| Table
Spo04893	0.71	Barchart \| Table
Spo20460	0.71	Barchart \| Table
Spo03008	0.71	Barchart \| Table
Spo06341	0.71	Barchart \| Table
Spo07016	0.70	Barchart \| Table
Spo08931	0.70	Barchart \| Table
Spo05090	0.70	Barchart \| Table
Spo01128	0.70	Barchart \| Table
Spo03007	0.70	Barchart \| Table
Spo26726	0.70	Barchart \| Table
Spo02991	0.70	Barchart \| Table
Spo10565	0.69	Barchart \| Table
Spo07017	0.69	Barchart \| Table
Spo05909	0.69	Barchart \| Table
Spo14238	0.69	Barchart \| Table
Spo24937	0.69	Barchart \| Table
Spo15994	0.69	Barchart \| Table
Spo22505	0.69	Barchart \| Table
Spo04409	0.69	Barchart \| Table
Spo04114	0.69	Barchart \| Table
Spo21983	0.69	Barchart \| Table
Spo24001	0.69	Barchart \| Table
Spo19873	0.69	Barchart \| Table
Spo20154	0.69	Barchart \| Table
Spo06840	0.69	Barchart \| Table
Spo19664	0.68	Barchart \| Table
Spo06904	0.68	Barchart \| Table
Spo07448	0.68	Barchart \| Table
Spo12084	0.68	Barchart \| Table
Spo00444	0.68	Barchart \| Table
Spo09633	0.68	Barchart \| Table
Spo15160	0.68	Barchart \| Table
Spo07916	0.68	Barchart \| Table
Spo26272	0.68	Barchart \| Table
Spo03573	0.68	Barchart \| Table
Spo02397	0.68	Barchart \| Table
Spo10211	0.67	Barchart \| Table
Spo03878	0.67	Barchart \| Table
Spo06873	0.67	Barchart \| Table
Spo09672	0.67	Barchart \| Table
Spo12918	0.67	Barchart \| Table
Spo19441	0.67	Barchart \| Table
Spo20519	0.67	Barchart \| Table
Spo25661	0.66	Barchart \| Table
Spo26108	0.66	Barchart \| Table
Spo06497	0.66	Barchart \| Table
Spo24238	0.66	Barchart \| Table
Spo19440	0.66	Barchart \| Table
Spo19413	0.66	Barchart \| Table
Spo19178	0.66	Barchart \| Table
Spo19112	0.66	Barchart \| Table
Spo18571	0.66	Barchart \| Table
Spo15816	0.66	Barchart \| Table
Spo15475	0.66	Barchart \| Table
Spo14513	0.66	Barchart \| Table
Spo12298	0.66	Barchart \| Table
Spo05244	0.65	Barchart \| Table
Spo24275	0.65	Barchart \| Table
Spo24373	0.65	Barchart \| Table
Spo22939	0.65	Barchart \| Table