Spo21969 (gene) | SpinachBase

Overview


Name	Spo21969
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Lectin
Location	SpoScf_00297 : 342273 .. 342981 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAACAAGTCGCCCAGGTTTGAACTTATATATTTTACGCGCTATTATTTTTCTTTCGTAATGCATATTCAATTCGTTCATCCAATCCTAATAGTCTAATTATATGCATAATGTTGCTTTTGTCTTGACTCGCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGGTTAGTGTTATATATGACTGAGCACCTATAAATTTTCATACGTGATACTTCTTGTTTAGATTTTTGTCCTCTAACGTTTTTCCCTTTATATAGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

mRNA sequence

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

Coding sequence (CDS)

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGCCCCGAAAATTACAGCTTTAAACTTCAAGAAGGTGAAACTATCAAGGAAGTCATCGTAAGGCATGGCTTCATTGTTGACGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCATCAGTTGTCATGCCAAGGAGTCAAGGATTGCACTCAAATGTGGTGAAAAGATAACCCAGATTTCTGGCACATACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACGTTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAAGGGAGTCGATTGTCCACGTGCTTTTGCATCGCCATGCCCAATTGACGGTCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTGTTGGGATTTTCGTCCAGAAGAAGGTATAA

Protein sequence

MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGTYTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21969.1	Spo21969.1	mRNA

Homology

[Close]

BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902181285|gb|KNA09703.1| (hypothetical protein SOVF_151170 [Spinacia oleracea])

HSP 1 Score: 354.0 bits (907), Expect = 1.400e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 351.3 bits (900), Expect = 9.300e-94
Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902174416|gb|KNA08411.1| (hypothetical protein SOVF_162610 [Spinacia oleracea])

HSP 1 Score: 342.8 bits (878), Expect = 3.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 341.3 bits (874), Expect = 9.600e-91
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. NCBI nr
Match: gi|902223762|gb|KNA19569.1| (hypothetical protein SOVF_060350 isoform B [Spinacia oleracea])

HSP 1 Score: 337.4 bits (864), Expect = 1.400e-89
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSP7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151170 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.000e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 6.500e-94
Identity = 162/164 (98.78%), Postives = 164/164 (100.00%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPB9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_162610 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 6.700e-91
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKW0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 9.700e-90
Identity = 155/164 (94.51%), Postives = 158/164 (96.34%), Query Frame = 1

		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVR+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKK 164

[Close]

BLAST of Spo21969.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.200e-13
Identity = 48/151 (31.79%), Postives = 82/151 (54.30%), Query Frame = 1

		  
Query: 15  GPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGTYTKMFGGISCH--A 74
           GP+G    + +S+   EG  I ++I+  G  + ++ F   K   G  +  FGG++     
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  KESRIALKC-GEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGKGVDCPR 134
           +++ +++    E +T ISGTYG YK+++   TI +L   TNL    YGP+G+        
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLAT--YGPFGKASAT---- 423

Query: 135 AFASPCPIDGPVVGVFGRHNNYLESVGIFVQ 163
           +F+ P   +  VVG  GR  +YL+++GIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442

The following BLAST results are available for this feature:

BLAST of Spo21969.1 vs. NCBI nr
BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
BLAST of Spo21969.1 vs. ExPASy Swiss-Prot
BLAST of Spo21969.1 vs. TAIR (Arabidopsis)

BLAST of Spo21969.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902181285\|gb\|KNA09703.1\|	1.4e-94	100.	hypothetical protein SOVF_1511...	[more]
gi\|902146535\|gb\|KNA05074.1\|	9.3e-94	98.7	hypothetical protein SOVF_1937...	[more]
gi\|902174416\|gb\|KNA08411.1\|	3.3e-91	95.7	hypothetical protein SOVF_1626...	[more]
gi\|902239194\|gb\|KNA25495.1\|	9.6e-91	96.3	hypothetical protein SOVF_0063...	[more]
gi\|902223762\|gb\|KNA19569.1\|	1.4e-89	94.5	hypothetical protein SOVF_0603...	[more]

BLAST of Spo21969.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QSP7_SPIOL	1.0e-94	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QCS4_SPIOL	6.5e-94	98.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9QPB9_SPIOL	2.3e-91	95.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9S169_SPIOL	6.7e-91	96.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9RKW0_SPIOL	9.7e-90	94.5	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo21969.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
LEC_PARPC	6.2e-13	31.7	Mannose/glucose-specific lecti...	[more]

BLAST of Spo21969.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001229	Jacalin-like lectin domain	GENE3D	2.100.10.30		coord: 10..162 score: 1.6
IPR001229	Jacalin-like lectin domain	PFAM	PF01419	Jacalin	coord: 36..161 score: 1.
IPR001229	Jacalin-like lectin domain	PROFILE	PS51752	JACALIN_LECTIN	coord: 11..163 score: 12
IPR001229	Jacalin-like lectin domain	unknown	SSF51101	Mannose-binding lectins	coord: 9..161 score: 6.54

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0030001	metal ion transport
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006457	protein folding
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0048825	cotyledon development
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0035725	sodium ion transmembrane transport
biological_process	GO:0006885	regulation of pH
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0055075	potassium ion homeostasis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006452	translational frameshifting
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0006396	RNA processing
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0016246	RNA interference
biological_process	GO:0009611	response to wounding
biological_process	GO:0009744	response to sucrose
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0048571	long-day photoperiodism
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0006869	lipid transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0061025	membrane fusion
biological_process	GO:0010351	lithium ion transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0043090	amino acid import
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0015696	ammonium transport
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009987	cellular process
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0000932	P-body
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0045252	oxoglutarate dehydrogenase complex
cellular_component	GO:0005669	transcription factor TFIID complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008641	ubiquitin-like modifier activating enzyme activity
molecular_function	GO:0015385	sodium:proton antiporter activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21973	0.89	Barchart \| Table
Spo21985	0.88	Barchart \| Table
Spo21968	0.86	Barchart \| Table
Spo21982	0.82	Barchart \| Table
Spo21984	0.81	Barchart \| Table
Spo21082	0.80	Barchart \| Table
Spo06873	0.75	Barchart \| Table
Spo15994	0.74	Barchart \| Table
Spo22139	0.73	Barchart \| Table
Spo09711	0.73	Barchart \| Table
Spo21077	0.72	Barchart \| Table
Spo24839	0.72	Barchart \| Table
Spo04409	0.72	Barchart \| Table
Spo02105	0.71	Barchart \| Table
Spo26272	0.71	Barchart \| Table
Spo24775	0.71	Barchart \| Table
Spo24001	0.71	Barchart \| Table
Spo16378	0.70	Barchart \| Table
Spo15160	0.70	Barchart \| Table
Spo23496	0.70	Barchart \| Table
Spo14703	0.70	Barchart \| Table
Spo08380	0.70	Barchart \| Table
Spo01128	0.70	Barchart \| Table
Spo19394	0.70	Barchart \| Table
Spo22505	0.69	Barchart \| Table
Spo02470	0.69	Barchart \| Table
Spo02991	0.69	Barchart \| Table
Spo04893	0.69	Barchart \| Table
Spo05090	0.69	Barchart \| Table
Spo12084	0.69	Barchart \| Table
Spo20386	0.69	Barchart \| Table
Spo26108	0.69	Barchart \| Table
Spo09855	0.68	Barchart \| Table
Spo23622	0.68	Barchart \| Table
Spo04114	0.68	Barchart \| Table
Spo12918	0.68	Barchart \| Table
Spo25306	0.68	Barchart \| Table
Spo05883	0.68	Barchart \| Table
Spo19664	0.68	Barchart \| Table
Spo23966	0.68	Barchart \| Table
Spo11226	0.68	Barchart \| Table
Spo03878	0.67	Barchart \| Table
Spo21406	0.67	Barchart \| Table
Spo24936	0.67	Barchart \| Table
Spo14267	0.67	Barchart \| Table
Spo25346	0.67	Barchart \| Table
Spo19873	0.66	Barchart \| Table
Spo21410	0.66	Barchart \| Table
Spo12224	0.66	Barchart \| Table
Spo09672	0.66	Barchart \| Table
Spo06840	0.66	Barchart \| Table
Spo06317	0.66	Barchart \| Table
Spo25100	0.66	Barchart \| Table
Spo26910	0.66	Barchart \| Table
Spo18221	0.66	Barchart \| Table
Spo00444	0.65	Barchart \| Table
Spo07448	0.65	Barchart \| Table
Spo24399	0.65	Barchart \| Table
Spo06341	0.65	Barchart \| Table
Spo20154	0.65	Barchart \| Table