Spo21973 (gene)

Overview
NameSpo21973
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLectin
LocationSpoScf_00297 : 455055 .. 455888 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCACCAAGTCGCCCAGGTTCGAACTTGCTTAACACGCTATTATTTCTCGTTCTTAATGCATACTGTTTCATTCATATATTCATCCACTCCTAATACTCTAATAGTACACCTAATTATATGCATAATGTTATTAACGTTGTTTTTGTCTCGACTCGCAGAAGCATATGGTTGAACAATTCGGACCTTATGGTTCTCAGTGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAAGAAGTCATCGTAAGATATGGCTACATTGTTGATGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGCCGTGCCAAGGAGTCAAGGGTTAGTGCTATATATGATTGAGGACCTATATATGGTATACTTCATTTTTTTTCCGTTTTATTCCTCTAACGTTTTCACCTTTACATAGATTGTACTCAAGTGTGGTGAAAAGATAACCCAGATTTCTGGCACCTACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAATGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTATTGGAATTTTCGTCCAGAAGAAGGTACAAAATGTTATTGCAAAATTTTGAAACATATTTGGTTTAATTAAGCTAATATGTACTCGGCTAATTTGTTTCTATGTAAATTATTGATCAGGATTGCCCATGCGCTTAA

mRNA sequence

ATGGCTCACCAAGTCGCCCAGAAGCATATGGTTGAACAATTCGGACCTTATGGTTCTCAGTGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAAGAAGTCATCGTAAGATATGGCTACATTGTTGATGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGCCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATAACCCAGATTTCTGGCACCTACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAATGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTATTGGAATTTTCGTCCAGAAGAAGGATTGCCCATGCGCTTAA

Coding sequence (CDS)

ATGGCTCACCAAGTCGCCCAGAAGCATATGGTTGAACAATTCGGACCTTATGGTTCTCAGTGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAAGTATCAAAGAAGTCATCGTAAGATATGGCTACATTGTTGATGCTATTGGCTTCGTCGTAGCCAAGCCTTGTGGAGGTACCTACACCAAGATGTTTGGTGGCAACGATTGCCGTGCCAAGGAGTCAAGGATTGTACTCAAGTGTGGTGAAAAGATAACCCAGATTTCTGGCACCTACGGAAACTATAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCAACTGGTTATGGACCATATGGACAAGGAAATGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTTGGAAGGCACAACAACTACCTCGAGTCTATTGGAATTTTCGTCCAGAAGAAGGATTGCCCATGCGCTTAA

Protein sequence

MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21973.1Spo21973.1mRNA


Homology
[Close]
BLAST of Spo21973.1 vs. NCBI nr
Match: gi|902223762|gb|KNA19569.1| (hypothetical protein SOVF_060350 isoform B [Spinacia oleracea])

HSP 1 Score: 368.6 bits (945), Expect = 5.800e-99
Identity = 167/169 (98.82%), Postives = 169/169 (100.00%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 363.6 bits (932), Expect = 1.900e-97
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. NCBI nr
Match: gi|902170609|gb|KNA07866.1| (hypothetical protein SOVF_167930 isoform A [Spinacia oleracea])

HSP 1 Score: 361.3 bits (926), Expect = 9.200e-97
Identity = 162/169 (95.86%), Postives = 168/169 (99.41%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQ+GPYGSQCPENYSFKLQEGESIKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. NCBI nr
Match: gi|902223761|gb|KNA19568.1| (hypothetical protein SOVF_060350 isoform A [Spinacia oleracea])

HSP 1 Score: 350.5 bits (898), Expect = 1.600e-93
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 1 

		  

Query: 10  MVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND 69
           MVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND
Sbjct: 1   MVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND 60

Query: 70  CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC 129
           CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC
Sbjct: 61  CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC 120

Query: 130 PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA
Sbjct: 121 PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 160
[Close]
BLAST of Spo21973.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 350.1 bits (897), Expect = 2.100e-93
Identity = 158/169 (93.49%), Postives = 163/169 (96.45%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVR+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKW0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.000e-99
Identity = 167/169 (98.82%), Postives = 169/169 (100.00%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.300e-97
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167930 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 6.400e-97
Identity = 162/169 (95.86%), Postives = 168/169 (99.41%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MAHQVAQKHMVEQ+GPYGSQCPENYSFKLQEGESIKEVI+R+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJA5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060350 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.100e-93
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 1 

		  

Query: 10  MVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND 69
           MVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND
Sbjct: 1   MVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGGND 60

Query: 70  CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC 129
           CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC
Sbjct: 61  CRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDC 120

Query: 130 PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA
Sbjct: 121 PRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 160
[Close]
BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 1.500e-93
Identity = 158/169 (93.49%), Postives = 163/169 (96.45%), Query Frame = 1 

		  

Query: 1   MAHQVAQKHMVEQFGPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQ+GPYGSQCPENYSFKLQEGE+IKEVIVR+GYIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120
           YTKMFGG  C AKESRI LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+GYGP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESIGIFVQKKDCPCA 170
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLES+GIFVQKKDCPCA
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKDCPCA 169
[Close]
BLAST of Spo21973.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-13
Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGESIKEVIVRYGYIVDAIGFVVAKPCGGTYTKMFGG---NDCR 74
           GP+G    + +S+   EG  I ++I+  G  + ++ F   K   G  +  FGG    D  
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  AKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDCPR 134
            K +  +    E +T ISGTYG YK+++   TI +L   TNL    YGP+G+ +      
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNLAT--YGPFGKASAT---- 423

Query: 135 AFASPCPIDGPVVGVFGRHNNYLESIGIFVQ 163
           +F+ P   +  VVG  GR  +YL++IGIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442
[Close]
BLAST of Spo21973.1 vs. ExPASy Swiss-Prot
Match: GOS9_ORYSI (Protein GOS9 OS=Oryza sativa subsp. indica GN=GOS9 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.700e-7
Identity = 49/137 (35.77%), Postives = 64/137 (46.72%), Query Frame = 1 

		  

Query: 34  SIKEVIVRYGYIVDAIGFV---------VAKPCGGTYTKMFGGNDCRAKESRIVLKCGEK 93
           S+K V +R G  +DAI F          +A P GG      GGN      + I L   E 
Sbjct: 27  SLKSVTIRSGAAIDAIAFTYIGTDGKEHLAGPWGGG-----GGNP-----TTITLGSQEF 86

Query: 94  ITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDCPRAFASPCPIDGPVV 153
           +  ISGT+ N         +  LKI TN+  T Y  +GQG G     AF+ P    G VV
Sbjct: 87  VKGISGTFTN--------VVTNLKIVTNV--TTYN-FGQGGGT----AFSLPLQ-SGSVV 137

Query: 154 GVFGRHNNYLESIGIFV 162
           G FGR    ++SIG++V
Sbjct: 147 GFFGRAGALVDSIGVYV 137
[Close]
BLAST of Spo21973.1 vs. ExPASy Swiss-Prot
Match: GOS9_ORYSJ (Protein GOS9 OS=Oryza sativa subsp. japonica GN=GOS9 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.700e-7
Identity = 49/137 (35.77%), Postives = 64/137 (46.72%), Query Frame = 1 

		  

Query: 34  SIKEVIVRYGYIVDAIGFV---------VAKPCGGTYTKMFGGNDCRAKESRIVLKCGEK 93
           S+K V +R G  +DAI F          +A P GG      GGN      + I L   E 
Sbjct: 27  SLKSVTIRSGAAIDAIAFTYIGTDGKEHLAGPWGGG-----GGNP-----TTITLGSQEF 86

Query: 94  ITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDCPRAFASPCPIDGPVV 153
           +  ISGT+ N         +  LKI TN+  T Y  +GQG G     AF+ P    G VV
Sbjct: 87  VKGISGTFTN--------VVTNLKIVTNV--TTYN-FGQGGGT----AFSLPLQ-SGSVV 137

Query: 154 GVFGRHNNYLESIGIFV 162
           G FGR    ++SIG++V
Sbjct: 147 GFFGRAGALVDSIGVYV 137
[Close]
BLAST of Spo21973.1 vs. TAIR (Arabidopsis)
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.900e-6
Identity = 39/150 (26.00%), Postives = 66/150 (44.00%), Query Frame = 1 

		  

Query: 15  GPYGSQCPENYSFKLQEGESIKEVIVRYGY-IVDAIGFVVAKPCGGTYTKMFGGNDCRAK 74
           GP+G    + +   +  G  IK++ V  G   + +I     +     ++   GG+     
Sbjct: 442 GPWGGDGGQAWDDGVFSG--IKQIFVTRGNDAITSIQIEYDRNGQSVWSIKHGGDSNGVA 501

Query: 75  ESRIVLKC-GEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGPYGQGNGVDCPRA 134
             RI  +   E IT ISG YG     +    + +L  +T+     YGPYG+  G      
Sbjct: 502 THRIKFEYPDESITCISGYYGPLNNSDRYNVVKSLSFYTSR--GRYGPYGEETGT----- 561

Query: 135 FASPCPIDGPVVGVFGRHNNYLESIGIFVQ 163
           F +     G V+G  GR + +L++IG+ +Q
Sbjct: 562 FFTSTTTQGKVLGFHGRSSFHLDAIGVHMQ 582
The following BLAST results are available for this feature:
BLAST of Spo21973.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902223762|gb|KNA19569.1|5.8e-9998.8hypothetical protein SOVF_0603... [more]
gi|902239194|gb|KNA25495.1|1.9e-9797.0hypothetical protein SOVF_0063... [more]
gi|902170609|gb|KNA07866.1|9.2e-9795.8hypothetical protein SOVF_1679... [more]
gi|902223761|gb|KNA19568.1|1.6e-9398.7hypothetical protein SOVF_0603... [more]
gi|902146535|gb|KNA05074.1|2.1e-9393.4hypothetical protein SOVF_1937... [more]
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BLAST of Spo21973.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RKW0_SPIOL4.0e-9998.8Uncharacterized protein OS=Spi... [more]
A0A0K9S169_SPIOL1.3e-9797.0Uncharacterized protein OS=Spi... [more]
A0A0K9QMR1_SPIOL6.4e-9795.8Uncharacterized protein OS=Spi... [more]
A0A0K9RJA5_SPIOL1.1e-9398.7Uncharacterized protein OS=Spi... [more]
A0A0K9QCS4_SPIOL1.5e-9393.4Uncharacterized protein OS=Spi... [more]
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BLAST of Spo21973.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LEC_PARPC1.3e-1333.7Mannose/glucose-specific lecti... [more]
GOS9_ORYSI6.7e-735.7Protein GOS9 OS=Oryza sativa s... [more]
GOS9_ORYSJ6.7e-735.7Protein GOS9 OS=Oryza sativa s... [more]
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BLAST of Spo21973.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G19715.37.9e-626.0Mannose-binding lectin superfa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001229Jacalin-like lectin domainGENE3D2.100.10.30coord: 10..162
score: 9.5
IPR001229Jacalin-like lectin domainPFAMPF01419Jacalincoord: 36..161
score: 8.
IPR001229Jacalin-like lectin domainPROFILEPS51752JACALIN_LECTINcoord: 11..163
score: 14
IPR001229Jacalin-like lectin domainunknownSSF51101Mannose-binding lectinscoord: 9..161
score: 1.19

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0048825 cotyledon development
biological_process GO:0006452 translational frameshifting
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0045905 positive regulation of translational termination
biological_process GO:0045901 positive regulation of translational elongation
biological_process GO:0006396 RNA processing
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0016246 RNA interference
biological_process GO:0009611 response to wounding
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009744 response to sucrose
biological_process GO:0008152 metabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0006464 cellular protein modification process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005622 intracellular
cellular_component GO:0000785 chromatin
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0000932 P-body
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008641 ubiquitin-like modifier activating enzyme activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression