Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGATGTTAGCCAAAACCCTAGTTTTCACCTCTCAAAACCTCCCCATAAGCTAAAAACTAAACCCACCAAAAGAACAACAAGATCTAGAAACAAGAATAACAACACGGCTACCACGGCCGCCTCCACCACCAACAACAACCACAACAAGCCACTCAAGGTGGTTCACATCTCTAACCCTATGAAGTTCCAAGTCGCCGCAGCTGGGTTTCGAGCCCTTGTCCAAGGGCTCACCGGCCGCGACGCCGTAATCGACTGGCCTGAGGAACACCAACCCGACTTCGAAGTTGTGGCGGCTGCTGCTGGCGTTGCTGAAGATGATACTGCTGAGGATGATAGTAGTGCTAACAGTACGGATGATCAGGTAAATGATCACCACCATCATCAGCATCGTGATGAGGTTGTTAATATGTCTGCCTGTTTCGGGCCGTCCGATCATTATAATCTGATGAGCTTTGATTATTACGGGGCCCACTTTAATGGTGACGTCATTGTGGATGACGATGTTGAACAAAGCATGGTTGTTATGGATGATTTCCGCGCTTTTTTGGGGGATGTTAATCAATCATTACTTCATTATTAA ATGTCAGATGTTAGCCAAAACCCTAGTTTTCACCTCTCAAAACCTCCCCATAAGCTAAAAACTAAACCCACCAAAAGAACAACAAGATCTAGAAACAAGAATAACAACACGGCTACCACGGCCGCCTCCACCACCAACAACAACCACAACAAGCCACTCAAGGTGGTTCACATCTCTAACCCTATGAAGTTCCAAGTCGCCGCAGCTGGGTTTCGAGCCCTTGTCCAAGGGCTCACCGGCCGCGACGCCGTAATCGACTGGCCTGAGGAACACCAACCCGACTTCGAAGTTGTGGCGGCTGCTGCTGGCGTTGCTGAAGATGATACTGCTGAGGATGATAGTAGTGCTAACAGTACGGATGATCAGGTAAATGATCACCACCATCATCAGCATCGTGATGAGGTTGTTAATATGTCTGCCTGTTTCGGGCCGTCCGATCATTATAATCTGATGAGCTTTGATTATTACGGGGCCCACTTTAATGGTGACGTCATTGTGGATGACGATGTTGAACAAAGCATGGTTGTTATGGATGATTTCCGCGCTTTTTTGGGGGATGTTAATCAATCATTACTTCATTATTAA ATGTCAGATGTTAGCCAAAACCCTAGTTTTCACCTCTCAAAACCTCCCCATAAGCTAAAAACTAAACCCACCAAAAGAACAACAAGATCTAGAAACAAGAATAACAACACGGCTACCACGGCCGCCTCCACCACCAACAACAACCACAACAAGCCACTCAAGGTGGTTCACATCTCTAACCCTATGAAGTTCCAAGTCGCCGCAGCTGGGTTTCGAGCCCTTGTCCAAGGGCTCACCGGCCGCGACGCCGTAATCGACTGGCCTGAGGAACACCAACCCGACTTCGAAGTTGTGGCGGCTGCTGCTGGCGTTGCTGAAGATGATACTGCTGAGGATGATAGTAGTGCTAACAGTACGGATGATCAGGTAAATGATCACCACCATCATCAGCATCGTGATGAGGTTGTTAATATGTCTGCCTGTTTCGGGCCGTCCGATCATTATAATCTGATGAGCTTTGATTATTACGGGGCCCACTTTAATGGTGACGTCATTGTGGATGACGATGTTGAACAAAGCATGGTTGTTATGGATGATTTCCGCGCTTTTTTGGGGGATGTTAATCAATCATTACTTCATTATTAA MSDVSQNPSFHLSKPPHKLKTKPTKRTTRSRNKNNNTATTAASTTNNNHNKPLKVVHISNPMKFQVAAAGFRALVQGLTGRDAVIDWPEEHQPDFEVVAAAAGVAEDDTAEDDSSANSTDDQVNDHHHHQHRDEVVNMSACFGPSDHYNLMSFDYYGAHFNGDVIVDDDVEQSMVVMDDFRAFLGDVNQSLLHY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo28189.1 vs. NCBI nr
Match: gi|902170544|gb|KNA07853.1| (hypothetical protein SOVF_167920 [Spinacia oleracea]) HSP 1 Score: 383.6 bits (984), Expect = 2.000e-103 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo28189.1 vs. NCBI nr
Match: gi|731324534|ref|XP_010673020.1| (PREDICTED: uncharacterized protein LOC104889490 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 136.3 bits (342), Expect = 5.500e-29 Identity = 93/199 (46.73%), Postives = 117/199 (58.79%), Query Frame = 1
BLAST of Spo28189.1 vs. NCBI nr
Match: gi|870864049|gb|KMT15182.1| (hypothetical protein BVRB_3g062950 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 74.7 bits (182), Expect = 2.000e-10 Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 1
BLAST of Spo28189.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QME1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167920 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 1.400e-103 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo28189.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNT4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062950 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-10 Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo28189.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 3
BLAST of Spo28189.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 2
BLAST of Spo28189.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo28189.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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