Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCGTTGATAGGTCACATGGGGTATGTTTATATCATTAAAAAAGAAAAAAAAGTAAATAAAAGATTCACGTCAGCCTGTGCGCCTGAAGATCGAAGGCGCACAAGGCGCTGCGCCTTGCTTAAGGCGCACAAAGGCGCACGAAGGCGCGCGCTTGGTTGACATCATTAAGCCTGGAGAGCTGAAGGCGCCGAAGGCTGAGCGTAGGTGAGCCTTGAGCCTAGGCGCGCCTTGGGCGCACTTTTTTAAACTAAGCTTATCCGAGTCCCTGAACTCATAATGCCTCTTTGGACTATACATCATAATGTTTGAAAATAAACATTTACCTTTGACCTCAAGGATATACAACTCTTGCCACATCCTCTTTGAGACATAGGTACTTGTCTTGGATTTGAACAAAATTATATGGAGTATGACGCGAATTCAGTTCTGTCCTACTGTCTCCTAAAGGATTGGGTAGTTTGGTGGATCATGCAGTAATGTAGCGCCTTACCCATGCTTGAAAGTTGGACGATGAAGCTTACATGTCTTCTGTATTAGTAGGATATGTCCTGCGGTCCTGCCTCTCCCATCTTGGTTTTTGGAAGGCTAAAAGCTAGTACTAGCAGAAAATGTGATTTCAAGCTTTGATCTTGATTTTAGACATTAAAATCACCATCTTTGTTCATTGTTGCTTGGGTTTAATTTAGATTCCTCGAGTTTGGTACCAGCAAATTATCAGGCAAGGAGTACATGATGTTCTCGTGCTTTACTGGTTGAAGATCATTTTATTTATGCAAGTATGCGTGGAACAAGGATTGAATTTGTTATAATATGTTGGTTAGTGTCCAATTAAATGCAAGGGTCAACCATATGTTTTGTAATTTTATTTTCTTGATATTATTTGGTAAGCTTTATCCCTTCTTCAAAGCCATGTCTATTGCTACTTCGATCTGTAGAAGTTCATCTCAGATCTTAAAGGGTTGGTAAAACATTTGGAAGAGGCATGATGTTCTATTTTTCTCATATTCAGGGCAAGTGTAATTAATAGTCTTTCTATACTTGACAAAAAAATATATGAAACTCTGAAAGTATTCTTTCACTGTTGGAGAGGGTATTCAATGTCCCAAGTTCCCAACAATTCCTGTCCTTAAATGCAGAAATGAGGAGGCTTCTGGAATTACGAACCATGGATTTCTAGTCGATTATCTAGTTTCTTCCCGAAATAGTTTTTTCTGCAGAAAATCTGTCTGGTTGTACGAGAGTCGAGAGGCTTGTTTACGTTGAAGAGATTGCCACATTTTCTTAGTAGATATCTTTATTTTTCTGTGTAAAGCAGTCCAACTGTCATAAAGCAGCCTGCAGGCCGGAAGTTAGAAACCATCCCAGTGATGCTACGCTGGCCAAGCATATACAAGTATATTTTTGTGTATATATTTTTGGGGATATTTTTCTGTGTATATGTTGGATGGTGTTTCATTAATGGTAGTATCCTTTCCCTCCTCCAAGAACAAACTATAGTCTTTATTTTTGTGCACACTGAATTCTGAATTATGTCCAATTTCTGTTATTGCTAAATTGGTTTCATAAAGCAGCTTGCAGGCTGCAAATTAGAAAATTATCCTAGAGATGATATGCTGGCCAAGCATAAGTATTTTTGTTCCACAGACTAATACACTTGAAACTTTTTGTTGTTGATTTATTATTTTTGGGGATATTTTTCTTTGTATCTCTGACAGAAATTTTGTTGATGATAGTCCCCCCCTCTCCCCCATAATAAGCTATAATGTTTGTTTTTTATGGACGCGGACTTCTGTCCAATGTTTATTGGCTAAATTGGTTTTCTAACTTCTGTAGGACGTTTTTGAGTCAATGGGCCAGTTTGTTGATGGTCTGAAGTTTTCTGGAGGTTCTGATAGCTTAACGCCAGAGAGTTATATTAAGAGGATGACCGACATGGCTCGCAGGCATGATGTTTATATCAGTACCGGTAATTGGGGTGAACATTTTCTTCGCAAAGGGCCATCTGCTTTGAATCATTACATAGAGGTGATTAGTAATCAGGATTTATCCCCCTTCCACTTGTTTACAGTTAAATTCTAGTAGTTAATGTTCTTCTGAAATCTTTGTGTGGTCTCTTCAGGAATGTAAGCGCTTGGGTTTCAACACAATCGAGTTAGACGTGGGGTCACTTGAGCTCCCTGAAGAAACTCTTTTGAGATATGTGCATATGATTAAGGGAGCGGGTCTGAAAGTCAAGCCTCAGTTTGCAGTTAAATTTGACAAGTCTGATATACCATTGTCTGGAAATAGAGCATACGGGGCATATATAGCCCCAAGGCCCCGATCTTATGGTAAACAGACTTTCTTCTTCCTATGTAATATTCTTTGCCGTGTTTGATTCGGAAATTGTTTGAAGTATAATAACTTTATGTCTAATATTTGACGTGCTCCCTGAAGATAGGATAGCTTGATGATTTGTCTTTCTCAATCATACGGAGTATGCCTCTACTTTCTATCCATTTTTGTCTTCTCTATCTTCCGGAGGGTCTCCAGTTAGAGGTTTGTGAGAAAAGCATGTGGATCTACTTTTTACTAAAAGCCTGGACCAGCTTAAAAATGAGTGAAGTAGTGAACTGTTATGTGGTAGTTTAAGAATGTTTAGATGAACCCTTCTCATTGATATCTTCTGTGTATGTGATCTATTGTTTTTTTGGATACTCTTGTATAGTTGATGAAAGAAGTAATAGGTAATTCACTCCATGAAGTTTCCAAAAGGTGCTACACTGTATGGAAATCTCAGTACTCTGTCCTGCAATGAATTAATGTGTTTGGCTGTTCTGTTTCTGCATGTATAGATTTTGTTGAAGACGTAGACCTCCTAATCCGAAAGGCAGAGAGATGTCTGGAGGCTGGGGCAGACATGATAATGATTGATGCTGAAGATGTTTGCCGTCGAGCTGAATCATTAAGAGCAGATATCATCGCCAAGATTATTGGCCGGCTAGGAGTTGAGAAGACTATGTTTGAAGCGTCAGATGCCAGAACAGCTGATTGGTTCGTCAGCCAGTATGGTCCTAAGGTAATGAACTCTATCTGCCGTTCGTAATTTGTTGAAATACAGTAATTTGTTCTCTTTAGTGAGCTAGACGTTCAAAATGCAACATAATTTGTATTTCTTATAATCACACTTTCAGGTGAACCTTTTTGTGGATCACTCCCAAGTGGTGGATCTGGAGTGCCTCCGTGGACGCAATGTGGGCAAAAATCACATGTCGGTTCTCGGCTCTGCATATCGTCTGTTATAA ATGACCGTTGATAGGTCACATGGGGACGTTTTTGAGTCAATGGGCCAGTTTGTTGATGGTCTGAAGTTTTCTGGAGGTTCTGATAGCTTAACGCCAGAGAGTTATATTAAGAGGATGACCGACATGGCTCGCAGGCATGATGTTTATATCAGTACCGGTAATTGGGGTGAACATTTTCTTCGCAAAGGGCCATCTGCTTTGAATCATTACATAGAGGAATGTAAGCGCTTGGGTTTCAACACAATCGAGTTAGACGTGGGGTCACTTGAGCTCCCTGAAGAAACTCTTTTGAGATATGTGCATATGATTAAGGGAGCGGGTCTGAAAGTCAAGCCTCAGTTTGCAGTTAAATTTGACAAGTCTGATATACCATTGTCTGGAAATAGAGCATACGGGGCATATATAGCCCCAAGGCCCCGATCTTATGATTTTGTTGAAGACGTAGACCTCCTAATCCGAAAGGCAGAGAGATGTCTGGAGGCTGGGGCAGACATGATAATGATTGATGCTGAAGATGTTTGCCGTCGAGCTGAATCATTAAGAGCAGATATCATCGCCAAGATTATTGGCCGGCTAGGAGTTGAGAAGACTATGTTTGAAGCGTCAGATGCCAGAACAGCTGATTGGTTCGTCAGCCAGTATGGTCCTAAGGTGAACCTTTTTGTGGATCACTCCCAAGTGGTGGATCTGGAGTGCCTCCGTGGACGCAATGTGGGCAAAAATCACATGTCGGTTCTCGGCTCTGCATATCGTCTGTTATAA ATGACCGTTGATAGGTCACATGGGGACGTTTTTGAGTCAATGGGCCAGTTTGTTGATGGTCTGAAGTTTTCTGGAGGTTCTGATAGCTTAACGCCAGAGAGTTATATTAAGAGGATGACCGACATGGCTCGCAGGCATGATGTTTATATCAGTACCGGTAATTGGGGTGAACATTTTCTTCGCAAAGGGCCATCTGCTTTGAATCATTACATAGAGGAATGTAAGCGCTTGGGTTTCAACACAATCGAGTTAGACGTGGGGTCACTTGAGCTCCCTGAAGAAACTCTTTTGAGATATGTGCATATGATTAAGGGAGCGGGTCTGAAAGTCAAGCCTCAGTTTGCAGTTAAATTTGACAAGTCTGATATACCATTGTCTGGAAATAGAGCATACGGGGCATATATAGCCCCAAGGCCCCGATCTTATGATTTTGTTGAAGACGTAGACCTCCTAATCCGAAAGGCAGAGAGATGTCTGGAGGCTGGGGCAGACATGATAATGATTGATGCTGAAGATGTTTGCCGTCGAGCTGAATCATTAAGAGCAGATATCATCGCCAAGATTATTGGCCGGCTAGGAGTTGAGAAGACTATGTTTGAAGCGTCAGATGCCAGAACAGCTGATTGGTTCGTCAGCCAGTATGGTCCTAAGGTGAACCTTTTTGTGGATCACTCCCAAGTGGTGGATCTGGAGTGCCTCCGTGGACGCAATGTGGGCAAAAATCACATGTCGGTTCTCGGCTCTGCATATCGTCTGTTATAA MTVDRSHGDVFESMGQFVDGLKFSGGSDSLTPESYIKRMTDMARRHDVYISTGNWGEHFLRKGPSALNHYIEECKRLGFNTIELDVGSLELPEETLLRYVHMIKGAGLKVKPQFAVKFDKSDIPLSGNRAYGAYIAPRPRSYDFVEDVDLLIRKAERCLEAGADMIMIDAEDVCRRAESLRADIIAKIIGRLGVEKTMFEASDARTADWFVSQYGPKVNLFVDHSQVVDLECLRGRNVGKNHMSVLGSAYRLL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19728.1 vs. NCBI nr
Match: gi|902164838|gb|KNA07010.1| (hypothetical protein SOVF_175860 [Spinacia oleracea]) HSP 1 Score: 503.1 bits (1294), Expect = 2.900e-139 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo19728.1 vs. NCBI nr
Match: gi|731378343|ref|XP_010668147.1| (PREDICTED: uncharacterized protein LOC104885140 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 439.1 bits (1128), Expect = 5.200e-120 Identity = 213/245 (86.94%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Spo19728.1 vs. NCBI nr
Match: gi|870840614|gb|KMS94865.1| (hypothetical protein BVRB_014590 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 432.2 bits (1110), Expect = 6.300e-118 Identity = 213/252 (84.52%), Postives = 229/252 (90.87%), Query Frame = 1
BLAST of Spo19728.1 vs. NCBI nr
Match: gi|659067861|ref|XP_008441647.1| (PREDICTED: uncharacterized protein LOC103485727 [Cucumis melo]) HSP 1 Score: 401.0 bits (1029), Expect = 1.600e-108 Identity = 183/242 (75.62%), Postives = 218/242 (90.08%), Query Frame = 1
BLAST of Spo19728.1 vs. NCBI nr
Match: gi|449454694|ref|XP_004145089.1| (PREDICTED: uncharacterized protein LOC101208408 [Cucumis sativus]) HSP 1 Score: 396.7 bits (1018), Expect = 3.000e-107 Identity = 181/242 (74.79%), Postives = 216/242 (89.26%), Query Frame = 1
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIE3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175860 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 2.000e-139 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B1H0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_014590 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 3.600e-120 Identity = 213/245 (86.94%), Postives = 229/245 (93.47%), Query Frame = 1
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DVI7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_014590 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 4.400e-118 Identity = 213/252 (84.52%), Postives = 229/252 (90.87%), Query Frame = 1
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LUX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G066510 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 2.100e-107 Identity = 181/242 (74.79%), Postives = 216/242 (89.26%), Query Frame = 1
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Match: M5WGY9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009599mg PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 2.700e-107 Identity = 184/244 (75.41%), Postives = 221/244 (90.57%), Query Frame = 1
BLAST of Spo19728.1 vs. ExPASy Swiss-Prot
Match: HSA32_ARATH (Protein HEAT-STRESS-ASSOCIATED 32 OS=Arabidopsis thaliana GN=HSA32 PE=2 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.700e-102 Identity = 171/244 (70.08%), Postives = 209/244 (85.66%), Query Frame = 1
BLAST of Spo19728.1 vs. ExPASy Swiss-Prot
Match: PSLS_METTH (Phosphosulfolactate synthase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=comA PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.000e-12 Identity = 64/257 (24.90%), Postives = 106/257 (41.25%), Query Frame = 1
BLAST of Spo19728.1 vs. ExPASy Swiss-Prot
Match: PSLS_METJA (Phosphosulfolactate synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=comA PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.800e-9 Identity = 51/237 (21.52%), Postives = 97/237 (40.93%), Query Frame = 1
BLAST of Spo19728.1 vs. TAIR (Arabidopsis)
Match: AT4G21320.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 373.6 bits (958), Expect = 9.400e-104 Identity = 171/244 (70.08%), Postives = 209/244 (85.66%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19728.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19728.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19728.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo19728.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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