Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCTCGAGCAGCAGCGTGTCTATCCCAAGATAAAAGCACCTTCACAATTCCAAGAGCTAATAATAATGGAGGCCGCAGCAGCAGCACTTAAACCAGTCATCAATGTTGCCGCCATTTGTGGCTCCCTTCGCAAAGCTTCCTACAACAGAGGTCTCCTTCGTGCAGGTTCCCTCTCTTTATCTCTCCTCTTCCACAAACAAATTCTGAAATCAAATTTTAATGGCAGAATTTTAAATTTTGAAATCAGCGATGAAGTTAAGTACGGAATCAATCGAAGGAATGAAGATTAATTACATCGATATTTCGCCGTTACCGTTAATCAACACCGATCTCGAGGTCGACGGTACTTATCCGCCCGTTGTTGAAGCTTTTCGCCAGAAAATTCTGGAAGCTGATAGTATTCTCTTTGCTTCTCCTGAGTACAATTACTCTGTTGCTAGTATGTTTTTCTATTTCCCCCCATTTTTTTATTTTATTCTTTATCATTAATTCTTGCAATTTTACCAAATGTTCCAGTGTTCTATCTCAAATTGATACAATTACTTGATGGTTCTATATTTTAAGTCTAGTAAATGTGTGTTTGGTGAAATTTTGATTTTAAGATTAGTGCCAAAGTTGGTTGAGTTGGGATGATTAATCTGCATCATGGCTTCACTGAAACATTGTGGCTCCCTATAGAATAAAAATTTGCCAAAAATGATTATGTTCTTTTTTTTTTCTCTGGTTATTCCACTGAAACATTTTTAAGGGTTTAGTATTCATGACTTATGATATCATGGAGCTTTGGAATTTCTTTGGTTGATCGGTAATCATGAAAGGGCGTTTATCATAATATATTTTTTGATGATTTCCTTACAGTGCTGGATTAGTGCTAATGAGTCTTTTATGGATTTACTTATCAATTGGCGTAGGAATATCAGCATTGTTTAATTAGTTGGTGGGAAGGTTTTGTTTGACCGATACTTTTACACTATAATTTTGGATTATATATGTTACTTTTGCTTGTCTGTTTCTTTTGTGGAATAATTTTTTCCGATTCTGTTTAGTGATAACAGCTAATGGGCTAGGATAATGGTTAAAATGATTAGAAATCTACATTAATATTATTCTTGATAATGGTCAAGTTTGTTAAGTTGTCCATTAGGTAGAGCAGAAAGTTGGAAGATTACTGGTGATGCCATATGATGGGGCCTTGGTCAAAATGGTATGAGAATATTATGTAAAATAACTTTGGATGGAGATATTTGAGTAAGAATTCAACATTCCATCACTAATCCTTTAGTAAAATGCAATGCATTATAACTGGGAGGCGGCTTAGACTTTGGCACCAAGAATGTCACAAAGGTTAAAATTCATGTGCAATTTGACAGCATAGTAATTTGAAAACCAGGTTGTTTGTTTTACACTAAACTAGTTTTTGTTCCCGTTCTACGCATGGGCTATATTTTAGGAAACTCAATTAAAAAAAAATGGTAAATTGACATACCAAAATGATTAAGATATAAATGTATAATACTTCACTGAAAACTTTCACTAATAATTTTGAAAGTACGTAGACAAACTAAAATTTTCAAGATATATTGGGTGGAAGCGTTACTTTTATGGAATATATTATGAGCTCCCATAAGGCCACAAATACATTCTTAATTAGGAGTATATCTTTTTATCCAAAGAGTTTTTAAAAAATGAGAATAAGAGAAATATGCTAGTTGGAGTAACTAAGTTAATCATATGTATTCTTTGTATTAAACCAAAGAAATCCACGAATCTTCAATATGCTAAGAAATTCACCGTTGTTGGTTGTTGGATTAAAAATTATGTTTCGGTTGCCAAGTATACACGGAGTTTCGCACCCTAACCTTTGCATCACAATCAAGAAAACTACCAAAAAGGAAAATGACCTAAGAATTAAGAGTTGTTGATCAAGCTAATCAAACGTGATATGTCAAAATTCTGGAAAATATCAAAGACTAAACCAATTTTTTTAAACTCGAAATTGTGCTTATAGAGTTAGGGGTATGGTAGTAGTAGATGTCATATAGATTTCAAAAAAAAAATGCATCCATGTTTATCGGTTTTTAAGTCGTTTGTAAAAGAACTTGAAATATGATGACGATTGAGGCAAGTCAAGCAACGGGATGCAAAGAAGATGCACCGTTGATTTAAATGGGCTAAGAAATGAATATAATGATAACATTAACTAATACCAACCTCATTAGCAGAAATATTTTTTCAGAAAACAATCGGGTGGGCATGATTAGAAGTTCATAACATAGTTTTAACTTCCACCCATCTATAGGAAAATAATGAAATTCTTCACAATGAAGAAATTTAGCAAAATAAGTCAGGGAGGAATGTCAGTCTATCAAAAATTGTAAACATGTAGGTTTAAAAAATAGTCAAATTCTTGGCTATGTATTCTTGGCCACGTGTCTTCTAAGTGGTCATGATTATGTGTCCTCCACGTGTCTTCAAAATAGTGTTGCTTACGTGTCATTAAGATGGAGTTGGTTTTCTTTTTTAAATACTAGGTATTGATTATATGAACTCTAGTTCTATTGCTTTTCTTCATCAACAAATACCTTATTACTTCTTATAAGATTCCCATATTTAATTAGTGCTTTGAGAAATAATTTTAGAAGTTATGCCTCATTATTTTCTGGGTTCTGTAAACACGTTGTTTAATAAAGGATGGATGAAATGCTTCAAATTTATCGTTGTCAGCTTGTCACCATGTTAAGGGGCTCGATTACGTCTGTGCATGACACCGCTGTTTCTCTTCTCTGCAAAGTGCAAACATAAACACCCTTCTTTCTGCAGCTGAGTATTAGCTTAAACAAACTCTACTCAAACCCTTAGACTTGGATACATCTAAACTAACTTTGTCAATCAGGCATTAGAGTGTCTCTGTTCCTATTCTACTTGAGTCACTGCTGGAGTTCCATAAAAAAATGTTGATTCTTGGAGATTTCTTAACCTTCCTATCTCAGTCATGTACGTACAACATATCTGAAAGACTGAAACTTCTGTAGCTGGAGAGTTTGTCGCCTATTTTCCTTTTGGCTGTAAGATTGTATGCTGTAAGATTGTATTGACATGTAGGGGGTGCAAAATTGCCTTCTGTAGTTCTGTGTAAGCCCAATTGTTTTTCTTAGTTTGCAAATTGCCGTAGATGTTCTATCTTTGAGCGATGCAAGCTAGGAGTTTATTTACCCATATATCTTTTTTGTATCACTGAGCTGGTTGCTCAATTTCAAACTTTGAATAGTGGTTTTATCCACTTACATAATTTTTCAAACCCATAATGCCAATTAATCAGGGGCCTGACTTTTTCTACCTGACACGACTGGTCCGTTTCCCTATTGACATTCTAGCAGTTTGAAAGCAAATCCAAATTTTTCTGACTTCAGTTTAATTCCGCAGACAAATGATACTGATATCTGACGAAGCACTCTATAGTCCATAATTTACAAGTTTCTAGTTGTTGTAGAAACTTTCACAAGTATAGATTGGCACATGTTTTACTTACGTGGTAGTTCATTCATTGTTAAACAAATTGATACACTTCCTACTTTGAGATAAAATATGCATACTTCAATAAACTTCCCAAACAACTATTGGTTTGGTGCAGCATCTTGCTCTAAATGCCATCTTTTTACTTCGGAATTCCTTACTACTGAGTCACCAAATCACTGGAGTGATGACTGGTGAAATTCTAGATTTGGGATTTATTATTTAGTGGTTATAACTTTTCAGTTTTTGTATGCGTAAGTGCGTAACTATGCCGAATATCTGCATCTTTCGAGAGGCTTGATTCTTTATTATTTAGTGGTCTAGATGAAGTTTGATTGATTGTGATTTGGAGATACAGAAAAGTAAAGATATTCAAGCTTTCGAGAGGTTTGATTCTCTGCCAATTAAACAAATAAAAGCTATTAACCACTTAATATGCTGCTTCCTAAAGTGACCCTACTCATAATGATGCTTAGCACTTTCATCTATTCCAGATTCCATCCCTTGATTTTTTTTTTTCAAGTACAAACTTACAGGGGTCTAGAGGGAAGGTTGAAATATTTGACCCCCCCCTGCTCTACCCACTACTAATTTCTTGGAATTGGTCAAAGATTACGATGGCCAAGGAATAGATTTTTGGATCATGGTTTATGCAGGCTCCGTCACAATGGTGCTGCGATTTTCCCTTATTGATGCTAAAGTTTTGGCATACCTTTATTCATGTTTTCAGCTCCTTTGAAGAATGCAATAGATTGGTCATCTAGACCACCAAATGTGTGGGCAGGTAAGCCTGCTGCAATCATAAGTAGTGGAGGAGGTTTTGGTGGGGGTCGAGCTCAATATCATCTGCGGCAAATTGGAGTTTTTCTTGATCTTCACTTCATCAACAAGCCGGAGTTTTTCTTGAATGCATTCCAACCTCCTGCCAAGTTTGACATTGAGGGTAATTTGATTGATGCAGATGCTGAAGAAAGGATAAAGAAAGTTCTTTTAGCGTTGCAAGCATTCACACTACTTCATAAAGGGAAATGCTGAACATCAATTGTACTTCTTTAGTTCTCTTAATTTAAGTGTATAACTGAATTCATTTGGAAGTGTGTTGTTATCTGTTTTACGAGTAACATGAGAATGAAATTTATTTGATGCAGTTTGAATGCCGAGTTGCCTACACCAATCTAGTTTAGTGTCTTGTACAAGTACCCATTCTAGATTGAAAAAAAATGCACTAATTAATTGTTATTTTGAACACTGCGCCCGATGACATTCATCCGGCAGGTATGGGTTGATATTGGGAAGGTCAAGACATTAAAAGCATCAATAGTGGTGCTATCTCTTATTTTCCCACTCTTAGTCTATCTCCTCATCCACCTCATTACCACTCTTATTAAGAGTTAGCTATTAAAAATCCCAAGAAATACACTAACTCTTATACACTACCTCTTATTTAATTTTTTCACATTTTAAATTTACTTTTATAACAAAAATTCAAAAAATTAAGCATGATATCCCACAATGTGCCACCTCAACCCCTTCTTATTTTCTAGGAGCTACCTCTTATTTAGAGGAAGTCTCCATCAACCTCTAAATAAGAGGAAGCTAAGAGTTACCTTGTTTTTTCTAAGAGGTAGCTCTTAACATTTCTCT ATTCCTCGAGCAGCAGCGTGTCTATCCCAAGATAAAAGCACCTTCACAATTCCAAGAGCTAATAATAATGGAGGCCGCAGCAGCAGCACTTAAACCAGTCATCAATGTTGCCGCCATTTGTGGCTCCCTTCGCAAAGCTTCCTACAACAGAGGTCTCCTTCGTGCAGCGATGAAGTTAAGTACGGAATCAATCGAAGGAATGAAGATTAATTACATCGATATTTCGCCGTTACCGTTAATCAACACCGATCTCGAGGTCGACGGTACTTATCCGCCCGTTGTTGAAGCTTTTCGCCAGAAAATTCTGGAAGCTGATAGTATTCTCTTTGCTTCTCCTGAGTACAATTACTCTGTTGCTACTCCTTTGAAGAATGCAATAGATTGGTCATCTAGACCACCAAATGTGTGGGCAGGTAAGCCTGCTGCAATCATAAGTAGTGGAGGAGGTTTTGGTGGGGGTCGAGCTCAATATCATCTGCGGCAAATTGGAGTTTTTCTTGATCTTCACTTCATCAACAAGCCGGAGTTTTTCTTGAATGCATTCCAACCTCCTGCCAAGTTTGACATTGAGGGTAATTTGATTGATGCAGATGCTGAAGAAAGGATAAAGAAAGTTCTTTTAGCGTTGCAAGCATTCACACTACTTCATAAAGGGAAATGCTGAACATCAATTGTACTTCTTTAGTTCTCTTAATTTAAGTGTATAACTGAATTCATTTGGAAGTGTGTTGTTATCTGTTTTACGAGTAACATGAGAATGAAATTTATTTGATGCAGTTTGAATGCCGAGTTGCCTACACCAATCTAGTTTAGTGTCTTGTACAAGTACCCATTCTAGATTGAAAAAAAATGCACTAATTAATTGTTATTTTGAACACTGCGCCCGATGACATTCATCCGGCAGGTATGGGTTGATATTGGGAAGGTCAAGACATTAAAAGCATCAATAGTGGTGCTATCTCTTATTTTCCCACTCTTAGTCTATCTCCTCATCCACCTCATTACCACTCTTATTAAGAGTTAGCTATTAAAAATCCCAAGAAATACACTAACTCTTATACACTACCTCTTATTTAATTTTTTCACATTTTAAATTTACTTTTATAACAAAAATTCAAAAAATTAAGCATGATATCCCACAATGTGCCACCTCAACCCCTTCTTATTTTCTAGGAGCTACCTCTTATTTAGAGGAAGTCTCCATCAACCTCTAAATAAGAGGAAGCTAAGAGTTACCTTGTTTTTTCTAAGAGGTAGCTCTTAACATTTCTCT ATGGAGGCCGCAGCAGCAGCACTTAAACCAGTCATCAATGTTGCCGCCATTTGTGGCTCCCTTCGCAAAGCTTCCTACAACAGAGGTCTCCTTCGTGCAGCGATGAAGTTAAGTACGGAATCAATCGAAGGAATGAAGATTAATTACATCGATATTTCGCCGTTACCGTTAATCAACACCGATCTCGAGGTCGACGGTACTTATCCGCCCGTTGTTGAAGCTTTTCGCCAGAAAATTCTGGAAGCTGATAGTATTCTCTTTGCTTCTCCTGAGTACAATTACTCTGTTGCTACTCCTTTGAAGAATGCAATAGATTGGTCATCTAGACCACCAAATGTGTGGGCAGGTAAGCCTGCTGCAATCATAAGTAGTGGAGGAGGTTTTGGTGGGGGTCGAGCTCAATATCATCTGCGGCAAATTGGAGTTTTTCTTGATCTTCACTTCATCAACAAGCCGGAGTTTTTCTTGAATGCATTCCAACCTCCTGCCAAGTTTGACATTGAGGGTAATTTGATTGATGCAGATGCTGAAGAAAGGATAAAGAAAGTTCTTTTAGCGTTGCAAGCATTCACACTACTTCATAAAGGGAAATGCTGA MEAAAAALKPVINVAAICGSLRKASYNRGLLRAAMKLSTESIEGMKINYIDISPLPLINTDLEVDGTYPPVVEAFRQKILEADSILFASPEYNYSVATPLKNAIDWSSRPPNVWAGKPAAIISSGGGFGGGRAQYHLRQIGVFLDLHFINKPEFFLNAFQPPAKFDIEGNLIDADAEERIKKVLLALQAFTLLHKGKC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo16519.1 vs. NCBI nr
Match: gi|902205883|gb|KNA15302.1| (hypothetical protein SOVF_099180 [Spinacia oleracea]) HSP 1 Score: 394.8 bits (1013), Expect = 8.800e-107 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Spo16519.1 vs. NCBI nr
Match: gi|731319846|ref|XP_010670492.1| (PREDICTED: NADPH:quinone oxidoreductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 345.5 bits (885), Expect = 6.100e-92 Identity = 169/194 (87.11%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of Spo16519.1 vs. NCBI nr
Match: gi|225465847|ref|XP_002264859.1| (PREDICTED: NADPH:quinone oxidoreductase [Vitis vinifera]) HSP 1 Score: 327.4 bits (838), Expect = 1.700e-86 Identity = 157/194 (80.93%), Postives = 180/194 (92.78%), Query Frame = 1
BLAST of Spo16519.1 vs. NCBI nr
Match: gi|147788076|emb|CAN60510.1| (hypothetical protein VITISV_012303 [Vitis vinifera]) HSP 1 Score: 323.6 bits (828), Expect = 2.500e-85 Identity = 155/195 (79.49%), Postives = 179/195 (91.79%), Query Frame = 1
BLAST of Spo16519.1 vs. NCBI nr
Match: gi|225465854|ref|XP_002265225.1| (PREDICTED: NADPH:quinone oxidoreductase [Vitis vinifera]) HSP 1 Score: 320.1 bits (819), Expect = 2.700e-84 Identity = 152/194 (78.35%), Postives = 178/194 (91.75%), Query Frame = 1
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R964_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099180 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 6.100e-107 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CYB1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g041680 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.300e-92 Identity = 169/194 (87.11%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Match: D7TX98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00850 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.200e-86 Identity = 157/194 (80.93%), Postives = 180/194 (92.78%), Query Frame = 1
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Match: A5AS03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012303 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 1.700e-85 Identity = 155/195 (79.49%), Postives = 179/195 (91.79%), Query Frame = 1
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Match: F6HVD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00880 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.900e-84 Identity = 152/194 (78.35%), Postives = 178/194 (91.75%), Query Frame = 1
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Match: NQR_ARATH (NADPH:quinone oxidoreductase OS=Arabidopsis thaliana GN=NQR PE=1 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.000e-83 Identity = 151/194 (77.84%), Postives = 174/194 (89.69%), Query Frame = 1
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Match: NQR_SOLTU (NAD(P)H:quinone oxidoreductase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.700e-79 Identity = 141/192 (73.44%), Postives = 163/192 (84.90%), Query Frame = 1
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Match: NQR1_ORYSJ (Probable NADPH:quinone oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os01g0953600 PE=2 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 3.700e-73 Identity = 137/193 (70.98%), Postives = 161/193 (83.42%), Query Frame = 1
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Match: NQR2_ORYSJ (Probable NADPH:quinone oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os01g0954000 PE=2 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.000e-63 Identity = 114/186 (61.29%), Postives = 144/186 (77.42%), Query Frame = 1
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Match: FMNRE_PSEAE (NAD(P)H-dependent FMN reductase PA1204 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1204 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.000e-38 Identity = 95/187 (50.80%), Postives = 122/187 (65.24%), Query Frame = 1
BLAST of Spo16519.1 vs. TAIR (Arabidopsis)
Match: AT3G27890.1 (NADPH:quinone oxidoreductase) HSP 1 Score: 310.8 bits (795), Expect = 5.900e-85 Identity = 151/194 (77.84%), Postives = 174/194 (89.69%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo16519.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo16519.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo16519.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo16519.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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