Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAGCGTTAATAATAGTGTAAACTCATTCTTTGGCCTTCCTCCTCCCTTGGAGGAAGACCACTTCTCTCAAACATTCCATCAAACACTTGGTGGCTCTCCGCCGCCACCACCGCGTAATCTCACCCTCACCTTCAATAATAACAATAAAGACAATCTCTTTAAACCCATTAAACACCACACCGAGTCGTCGGCGAATTTTGCCGGCGAACTCACCGAAGATATCGCCGGGGATTTGAGAAATTCCGGACAAATCGGGCTCATGTCGTGCACGGAGAGCCTTGGATTTGAGAGCTCCGACGACATACCGACATCTAGTTTAGACGATCTCGGTCGGGGTTGTAGTAATAATGATGATAAAAGTAATCAAGAATCATCTTCATCGTCGTCGTCGGCAAGATGTTTAATCAGGAGGAGAGATAAAGGGGTGGCGAACAGATGGGAGGAGAGGAGGTTTCCTCCGCCGTTAACGTCGTTGAGTGATAAGGGGAGGCGGAATTTTACGTTGAATTCGGTACGGACTAATGGTAGATTGGAGATTTTTGGGGTAATGATTGAACACCCAGAAATTCTTTGCGCCACCCGGGAAAACGGGCGGCTTAGAATGCATCTCGTCAAAACTCCCGTTATTTCCGATGACGAAGAATCAGAAGAGGAGGATGAGGCGGTGGAAGCTAGGGTGGAAGAGGAAGAGGATGAGGTAGAGGAGGATGAAGAGGGGGAGGTGGAGAGAGAATGGAGGAGAACGCCGTCGGCGGCGGGAATGCGACGGTGTTATCATCATCAGCGTCTGATGCACGTGTGGGGTCCGCAGCAAAATAGATTTGTGACGACCATGTGA ATGACGAGCGTTAATAATAGTGTAAACTCATTCTTTGGCCTTCCTCCTCCCTTGGAGGAAGACCACTTCTCTCAAACATTCCATCAAACACTTGGTGGCTCTCCGCCGCCACCACCGCGTAATCTCACCCTCACCTTCAATAATAACAATAAAGACAATCTCTTTAAACCCATTAAACACCACACCGAGTCGTCGGCGAATTTTGCCGGCGAACTCACCGAAGATATCGCCGGGGATTTGAGAAATTCCGGACAAATCGGGCTCATGTCGTGCACGGAGAGCCTTGGATTTGAGAGCTCCGACGACATACCGACATCTAGTTTAGACGATCTCGGTCGGGGTTGTAGTAATAATGATGATAAAAGTAATCAAGAATCATCTTCATCGTCGTCGTCGGCAAGATGTTTAATCAGGAGGAGAGATAAAGGGGTGGCGAACAGATGGGAGGAGAGGAGGTTTCCTCCGCCGTTAACGTCGTTGAGTGATAAGGGGAGGCGGAATTTTACGTTGAATTCGGTACGGACTAATGGTAGATTGGAGATTTTTGGGGTAATGATTGAACACCCAGAAATTCTTTGCGCCACCCGGGAAAACGGGCGGCTTAGAATGCATCTCGTCAAAACTCCCGTTATTTCCGATGACGAAGAATCAGAAGAGGAGGATGAGGCGGTGGAAGCTAGGGTGGAAGAGGAAGAGGATGAGGTAGAGGAGGATGAAGAGGGGGAGGTGGAGAGAGAATGGAGGAGAACGCCGTCGGCGGCGGGAATGCGACGGTGTTATCATCATCAGCGTCTGATGCACGTGTGGGGTCCGCAGCAAAATAGATTTGTGACGACCATGTGA ATGACGAGCGTTAATAATAGTGTAAACTCATTCTTTGGCCTTCCTCCTCCCTTGGAGGAAGACCACTTCTCTCAAACATTCCATCAAACACTTGGTGGCTCTCCGCCGCCACCACCGCGTAATCTCACCCTCACCTTCAATAATAACAATAAAGACAATCTCTTTAAACCCATTAAACACCACACCGAGTCGTCGGCGAATTTTGCCGGCGAACTCACCGAAGATATCGCCGGGGATTTGAGAAATTCCGGACAAATCGGGCTCATGTCGTGCACGGAGAGCCTTGGATTTGAGAGCTCCGACGACATACCGACATCTAGTTTAGACGATCTCGGTCGGGGTTGTAGTAATAATGATGATAAAAGTAATCAAGAATCATCTTCATCGTCGTCGTCGGCAAGATGTTTAATCAGGAGGAGAGATAAAGGGGTGGCGAACAGATGGGAGGAGAGGAGGTTTCCTCCGCCGTTAACGTCGTTGAGTGATAAGGGGAGGCGGAATTTTACGTTGAATTCGGTACGGACTAATGGTAGATTGGAGATTTTTGGGGTAATGATTGAACACCCAGAAATTCTTTGCGCCACCCGGGAAAACGGGCGGCTTAGAATGCATCTCGTCAAAACTCCCGTTATTTCCGATGACGAAGAATCAGAAGAGGAGGATGAGGCGGTGGAAGCTAGGGTGGAAGAGGAAGAGGATGAGGTAGAGGAGGATGAAGAGGGGGAGGTGGAGAGAGAATGGAGGAGAACGCCGTCGGCGGCGGGAATGCGACGGTGTTATCATCATCAGCGTCTGATGCACGTGTGGGGTCCGCAGCAAAATAGATTTGTGACGACCATGTGA MTSVNNSVNSFFGLPPPLEEDHFSQTFHQTLGGSPPPPPRNLTLTFNNNNKDNLFKPIKHHTESSANFAGELTEDIAGDLRNSGQIGLMSCTESLGFESSDDIPTSSLDDLGRGCSNNDDKSNQESSSSSSSARCLIRRRDKGVANRWEERRFPPPLTSLSDKGRRNFTLNSVRTNGRLEIFGVMIEHPEILCATRENGRLRMHLVKTPVISDDEESEEEDEAVEARVEEEEDEVEEDEEGEVEREWRRTPSAAGMRRCYHHQRLMHVWGPQQNRFVTTM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20094.1 vs. NCBI nr
Match: gi|902147866|gb|KNA05194.1| (hypothetical protein SOVF_192620 [Spinacia oleracea]) HSP 1 Score: 551.6 bits (1420), Expect = 7.900e-154 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo20094.1 vs. NCBI nr
Match: gi|731328346|ref|XP_010674996.1| (PREDICTED: protein FANTASTIC FOUR 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 238.4 bits (607), Expect = 1.500e-59 Identity = 164/311 (52.73%), Postives = 197/311 (63.34%), Query Frame = 1
BLAST of Spo20094.1 vs. NCBI nr
Match: gi|731356821|ref|XP_010689881.1| (PREDICTED: uncharacterized protein LOC104903534 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 142.9 bits (359), Expect = 8.500e-31 Identity = 78/129 (60.47%), Postives = 97/129 (75.19%), Query Frame = 1
BLAST of Spo20094.1 vs. NCBI nr
Match: gi|590643362|ref|XP_007030782.1| (Uncharacterized protein TCM_026518 [Theobroma cacao]) HSP 1 Score: 122.5 bits (306), Expect = 1.200e-24 Identity = 101/270 (37.41%), Postives = 138/270 (51.11%), Query Frame = 1
BLAST of Spo20094.1 vs. NCBI nr
Match: gi|565392388|ref|XP_006361886.1| (PREDICTED: uncharacterized protein LOC102591628 [Solanum tuberosum]) HSP 1 Score: 118.2 bits (295), Expect = 2.200e-23 Identity = 89/217 (41.01%), Postives = 127/217 (58.53%), Query Frame = 1
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD42_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_192620 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 5.500e-154 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNG6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g083340 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.000e-59 Identity = 164/311 (52.73%), Postives = 197/311 (63.34%), Query Frame = 1
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Match: A0A061F9W2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026518 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 8.300e-25 Identity = 101/270 (37.41%), Postives = 138/270 (51.11%), Query Frame = 1
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Match: M1CS71_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028568 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.600e-23 Identity = 89/217 (41.01%), Postives = 127/217 (58.53%), Query Frame = 1
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Match: V4TA26_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002008mg PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.000e-22 Identity = 92/210 (43.81%), Postives = 122/210 (58.10%), Query Frame = 1
BLAST of Spo20094.1 vs. TAIR (Arabidopsis)
Match: AT1G54740.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 63.9 bits (154), Expect = 1.800e-10 Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 1
BLAST of Spo20094.1 vs. TAIR (Arabidopsis)
Match: AT4G02810.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 49.3 bits (116), Expect = 4.500e-6 Identity = 57/171 (33.33%), Postives = 83/171 (48.54%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20094.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20094.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20094.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo20094.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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