Spo13963 (gene) | SpinachBase

Overview


Name	Spo13963
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pollen Ole e 1 allergen and extensin family protein, putative
Location	SpoScf_00450 : 32331 .. 33578 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGTAACTTATTACACCATACTGTAGTTTTATACTTCATACATGGTTGCACTTTCTGTGTTATCTGTTGTTAAGAATAGTAGTTTCGAGTTATCTGTTGTCAGTGTTGAAAACCAACTTTATTACTGAAAGTATGATCAAATTTAAGGCATAGTAATGCAACCTACTGAAAAACTGGCAGTGGTACCGAACAAGTTCTTATCTTTACAATGATTGTAAAGTCTGAAAGTTGTGAAATTGACTTAATTTTCTGTTTTGGGGCCGGGTCGGGGTTGAATGATAAAAAAAAAAACATGTAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAGTAACCCTTAACCCTTCTTTTAGGTTATTTGTAGTTTGCTTTCCCCTTTTCTTGTTTTTTTATATTAATAAAAAACTAAATTATATACTTTAATTTGTTAGTAAACTATTTGTTCTTATTAAACTTTTAGTATGGTGCTTATGATTTTAGTAAAGGAATGATACGTCACAATTTTCTATATTAATTATGTCGTCCAAGAATTATAAACTCTGATCCCCTTATGTCATGTGGCATAATGTTAATTCGGTAGGAATAACTAAATGACATTGGATGCCAAGCTGTTTAAAACTATTGATAAAAAATGAACAGCAAGTAGAATGTCTGTTCCAGTTCCAGGGCCACATATATAAATTCAACATATGAATAATGGTAGCAACAACTAAACAACATCTCTGTCCAATCCACACCCAAATAACACATCATTTATATAA

mRNA sequence

ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAGTAACCCTTAACCCTTCTTTTAGGTTATTTGTAGTTTGCTTTCCCCTTTTCTTGTTTTTTTATATTAATAAAAAACTAAATTATATACTTTAATTTGTTAGTAAACTATTTGTTCTTATTAAACTTTTAGTATGGTGCTTATGATTTTAGTAAAGGAATGATACGTCACAATTTTCTATATTAATTATGTCGTCCAAGAATTATAAACTCTGATCCCCTTATGTCATGTGGCATAATGTTAATTCGGTAGGAATAACTAAATGACATTGGATGCCAAGCTGTTTAAAACTATTGATAAAAAATGAACAGCAAGTAGAATGTCTGTTCCAGTTCCAGGGCCACATATATAAATTCAACATATGAATAATGGTAGCAACAACTAAACAACATCTCTGTCCAATCCACACCCAAATAACACATCATTTATATAA

Coding sequence (CDS)

ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAG

Protein sequence

MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13963.1	Spo13963.1	mRNA

Homology

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BLAST of Spo13963.1 vs. NCBI nr
Match: gi|902113108|gb|KNA03818.1| (hypothetical protein SOVF_205520 [Spinacia oleracea])

HSP 1 Score: 362.8 bits (930), Expect = 3.200e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1

		  
Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL
Sbjct: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120
           PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA
Sbjct: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120

Query: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN
Sbjct: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 173

[Close]

BLAST of Spo13963.1 vs. NCBI nr
Match: gi|731337801|ref|XP_010679984.1| (PREDICTED: pollen-specific protein-like At4g18596 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.1 bits (788), Expect = 9.400e-81
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 1

		  
Query: 1   MEKPSSILCLLLFFLTLS--FSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSY 60
           MEK SSILCL+LFF+TLS   S+G H  HH A+KPRSQITVIGTVYCDICSNNTFSRHSY
Sbjct: 1   MEK-SSILCLVLFFITLSASLSQGGH-GHHSASKPRSQITVIGTVYCDICSNNTFSRHSY 60

Query: 61  FLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESIC 120
           FLPGVEVKVDCKFKATA R AEEITFSV+RTTNEYGWYKLEIPSVDGIECARGA VES+C
Sbjct: 61  FLPGVEVKVDCKFKATAARAAEEITFSVSRTTNEYGWYKLEIPSVDGIECARGATVESVC 120

Query: 121 RATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           RA+L+GSSTSKCNVPGY TTTDVVYFKS +QNICIYGLSALNFRPS KNKDLC N
Sbjct: 121 RASLVGSSTSKCNVPGYTTTTDVVYFKSSQQNICIYGLSALNFRPSRKNKDLCAN 173

[Close]

BLAST of Spo13963.1 vs. NCBI nr
Match: gi|702443943|ref|XP_010024180.1| (PREDICTED: major pollen allergen Ole e 1-like [Eucalyptus grandis])

HSP 1 Score: 224.6 bits (571), Expect = 1.400e-55
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 1

		  
Query: 12  LFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKF 71
           +FF+   F      S    A+P S ITV+G VYCDIC NNTFSRHSYFLPG EVK+DCKF
Sbjct: 7   IFFIVSLFFIHSLPSQVEPARPNSHITVMGMVYCDICFNNTFSRHSYFLPGAEVKIDCKF 66

Query: 72  KATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCN 131
           +A +P+T E+I+FSV RTTN YG YKLEIP+VDGIECAR +A+ S C A+L+GSS+  CN
Sbjct: 67  EAVSPKTMEKISFSVKRTTNRYGVYKLEIPAVDGIECARDSAIVSFCEASLMGSSSDSCN 126

Query: 132 VPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           VPGY+TTTD + FKS++ N+CIY L+ALN+RPS K+K LCG
Sbjct: 127 VPGYRTTTDQIAFKSKQANLCIYSLNALNYRPSKKDKSLCG 167

[Close]

BLAST of Spo13963.1 vs. NCBI nr
Match: gi|743904736|ref|XP_011045748.1| (PREDICTED: major pollen allergen Ole e 1 [Populus euphratica])

HSP 1 Score: 216.1 bits (549), Expect = 4.900e-53
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1

		  
Query: 10  LLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDC 69
           L+LFFL+  F         P+ K  + I+V+G VYCDICSNNTFSRHSYFLPG EV++DC
Sbjct: 4   LVLFFLSFFFINSMSSKVEPSKKTSAHISVMGLVYCDICSNNTFSRHSYFLPGAEVRIDC 63

Query: 70  KFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSK 129
           KFKA+ P+T E+I+FSVNRTTN YG YKLEIPSVDGI CA  AA++S C A+L+ SS+  
Sbjct: 64  KFKASWPKTREQISFSVNRTTNRYGMYKLEIPSVDGIACAL-AAIDSSCEASLMSSSSKA 123

Query: 130 CNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           CNVPGY++TT+ +  K ++QN+CIY L+ALNFRPS  +  LCGN
Sbjct: 124 CNVPGYKSTTNEISIKVKQQNLCIYSLNALNFRPSKTDAGLCGN 166

[Close]

BLAST of Spo13963.1 vs. NCBI nr
Match: gi|357503585|ref|XP_003622081.1| (RALF-like protein [Medicago truncatula])

HSP 1 Score: 213.8 bits (543), Expect = 2.400e-52
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 1

		  
Query: 7   ILCLLLFFLT--LSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL L+L F T  L     R +       P SQI+V+G VYCD CSNN+FSRHSYFLPG E
Sbjct: 5   ILLLILPFFTQFLEVEPARPKVLGKPRFPNSQISVMGFVYCDFCSNNSFSRHSYFLPGAE 64

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           VKVDC FKA + +T E+IT SVNRTTN+YG Y++E+PSVDG+ CA G  V S C+A LIG
Sbjct: 65  VKVDCMFKAISAKTTEQITLSVNRTTNKYGMYRIEVPSVDGVRCAEGTEVMSSCQANLIG 124

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SST+ CNVPGY++T +V+  K+RK N+CIY L+ALNFRPS K+  LCGN
Sbjct: 125 SSTTACNVPGYKSTANVISVKARKTNLCIYSLNALNFRPSKKDTGLCGN 173

[Close]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAU3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205520 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.300e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1

		  
Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL
Sbjct: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120
           PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA
Sbjct: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120

Query: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN
Sbjct: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 173

[Close]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7U8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g131040 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.600e-81
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 1

		  
Query: 1   MEKPSSILCLLLFFLTLS--FSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSY 60
           MEK SSILCL+LFF+TLS   S+G H  HH A+KPRSQITVIGTVYCDICSNNTFSRHSY
Sbjct: 1   MEK-SSILCLVLFFITLSASLSQGGH-GHHSASKPRSQITVIGTVYCDICSNNTFSRHSY 60

Query: 61  FLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESIC 120
           FLPGVEVKVDCKFKATA R AEEITFSV+RTTNEYGWYKLEIPSVDGIECARGA VES+C
Sbjct: 61  FLPGVEVKVDCKFKATAARAAEEITFSVSRTTNEYGWYKLEIPSVDGIECARGATVESVC 120

Query: 121 RATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           RA+L+GSSTSKCNVPGY TTTDVVYFKS +QNICIYGLSALNFRPS KNKDLC N
Sbjct: 121 RASLVGSSTSKCNVPGYTTTTDVVYFKSSQQNICIYGLSALNFRPSRKNKDLCAN 173

[Close]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A059B3Z8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03355 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.600e-56
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 1

		  
Query: 12  LFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKF 71
           +FF+   F      S    A+P S ITV+G VYCDIC NNTFSRHSYFLPG EVK+DCKF
Sbjct: 7   IFFIVSLFFIHSLPSQVEPARPNSHITVMGMVYCDICFNNTFSRHSYFLPGAEVKIDCKF 66

Query: 72  KATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCN 131
           +A +P+T E+I+FSV RTTN YG YKLEIP+VDGIECAR +A+ S C A+L+GSS+  CN
Sbjct: 67  EAVSPKTMEKISFSVKRTTNRYGVYKLEIPAVDGIECARDSAIVSFCEASLMGSSSDSCN 126

Query: 132 VPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           VPGY+TTTD + FKS++ N+CIY L+ALN+RPS K+K LCG
Sbjct: 127 VPGYRTTTDQIAFKSKQANLCIYSLNALNYRPSKKDKSLCG 167

[Close]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: B7FIQ2_MEDTR (RALF-like protein OS=Medicago truncatula GN=MTR_7g027020 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.700e-52
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 1

		  
Query: 7   ILCLLLFFLT--LSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL L+L F T  L     R +       P SQI+V+G VYCD CSNN+FSRHSYFLPG E
Sbjct: 5   ILLLILPFFTQFLEVEPARPKVLGKPRFPNSQISVMGFVYCDFCSNNSFSRHSYFLPGAE 64

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           VKVDC FKA + +T E+IT SVNRTTN+YG Y++E+PSVDG+ CA G  V S C+A LIG
Sbjct: 65  VKVDCMFKAISAKTTEQITLSVNRTTNKYGMYRIEVPSVDGVRCAEGTEVMSSCQANLIG 124

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SST+ CNVPGY++T +V+  K+RK N+CIY L+ALNFRPS K+  LCGN
Sbjct: 125 SSTTACNVPGYKSTANVISVKARKTNLCIYSLNALNFRPSKKDTGLCGN 173

[Close]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LDJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563290 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.900e-52
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = 1

		  
Query: 7   ILCLLLFFLTLSFS--EGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL  +L  L  SF   E +    HP     SQITV+G VYCD CSNNTFS+HSYFL G E
Sbjct: 4   ILLFVLASLVPSFFLFEIKAAHSHPPRTTYSQITVMGLVYCDTCSNNTFSKHSYFLSGAE 63

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           V++DCK KA  PRTAE+I FSVNRTTN+YG YKLEIPSVDGI CA  +A+ S C+A+L+G
Sbjct: 64  VRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQASLMG 123

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SS+S CNVPGY++T+  +  KSR+ NICIY L+ LN+RPST++  LCGN
Sbjct: 124 SSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYRPSTRDDILCGN 172

[Close]

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G41050.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 195.7 bits (496), Expect = 2.400e-50
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 1

		  
Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           M++   +L LLL  L+L+    +H S    AKP  +ITV+G VYCD+CSNN+FS HSYF+
Sbjct: 1   MKQKLIMLLLLLQLLSLNSLSLKHSS----AKPNGKITVMGLVYCDVCSNNSFSNHSYFI 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESI--- 120
           PGVEV++ C+F + + RT E ITFS NRTTNE G YKL+I S++G+ CA  A  +S+   
Sbjct: 61  PGVEVRIICRFNSASSRTREMITFSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMAS 120

Query: 121 CRATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           C+A+LIG S   CNVPG++TTT+ V FKS+  N+C+YG +ALNFRP  KN  LCG
Sbjct: 121 CQASLIGRSKDSCNVPGFRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLCG 171

[Close]

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT3G26960.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 181.0 bits (458), Expect = 6.100e-46
Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 1

		  
Query: 8   LCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKV 67
           L +LL FL ++    +H S  P  KP ++IT++G VYCD+CS N+FS+HSYF+ GVEV++
Sbjct: 10  LFILLQFLLVNSLSSKHSS--PKPKPDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEVRI 69

Query: 68  DCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGS-- 127
            C+FKA +  T E ITFS NRTTNE+G YK+ I S+D   CA   ++ S C+A+LIG   
Sbjct: 70  VCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLD---CADVDSLASSCQASLIGRKN 129

Query: 128 -STSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
            S S CN+PGY+TTTD V FKS++ N C+YG +ALNFRP  ++  LCG
Sbjct: 130 FSDSSCNIPGYRTTTDQVLFKSQQSNSCVYGFNALNFRPFKRDLALCG 172

[Close]

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.200e-44
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 1

		  
Query: 33  PRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNE 92
           P S+ITV+G VYCD CS NTFSR SYFL GVEV V C+FKA++P+TAEE+  SVNRTTN 
Sbjct: 35  PSSRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNR 94

Query: 93  YGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSK---CNVPGYQTTTDVVYFKSRKQ 152
            G YKLEIP VDGI+C  G A+ S C A ++ +S+     C++P +QT T+ V  KS++ 
Sbjct: 95  SGVYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQD 154

Query: 153 NICIYGLSALNFRPSTKNKDLCGN 174
            +CIY LSAL+++P  KN  LCGN
Sbjct: 155 RVCIYSLSALSYKPPHKNTSLCGN 178

[Close]

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.300e-11
Identity = 43/160 (26.88%), Postives = 74/160 (46.25%), Query Frame = 1

		  
Query: 11  LLFFLTLSFSEGRHQSH-HPAAKPRSQITVIGTVYCDICSNNTFSRH-SYFLPGVEVKVD 70
           L+ FL +S + G  Q   H   K RS   V+GTVYCD C N  FS+  ++ + G  V V+
Sbjct: 13  LMIFLGISINGGLSQGQQHVMKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISGALVAVE 72

Query: 71  CKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTS 130
           C  + + P   +E+       T++ G +K+++P       ++       C   L+ SS  
Sbjct: 73  CIDENSKPSFRQEV------KTDKRGEFKVKLP----FSVSKHVKKIKRCSVKLLSSSQP 132

Query: 131 KCNVPGYQTTTDVVYFKSRK--QNICIYGLSALNFRPSTK 167
            C++    T++ +   KS    +N  ++      FRP  +
Sbjct: 133 YCSIASSATSSSLKRLKSNHHGENTRVFSAGFFTFRPENQ 162

[Close]

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 51.2 bits (121), Expect = 7.300e-7
Identity = 30/91 (32.97%), Postives = 44/91 (48.35%), Query Frame = 1

		  
Query: 41  GTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEI 100
           G+VYCD C     +R S FL G +VK++C+      RT   IT +    T++ G YK+E+
Sbjct: 39  GSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTITLTKEAVTDKTGSYKMEV 98

Query: 101 PSVDGIECARGAAVESICRATLIGSSTSKCN 132
                     G   E +C   L+ S  S C+
Sbjct: 99  ---------TGDHEEEVCELVLVQSPDSGCS 115

The following BLAST results are available for this feature:

BLAST of Spo13963.1 vs. NCBI nr
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
BLAST of Spo13963.1 vs. ExPASy Swiss-Prot
BLAST of Spo13963.1 vs. TAIR (Arabidopsis)

BLAST of Spo13963.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902113108\|gb\|KNA03818.1\|	3.2e-97	100.	hypothetical protein SOVF_2055...	[more]
gi\|731337801\|ref\|XP_010679984.1\|	9.4e-81	86.2	PREDICTED: pollen-specific pro...	[more]
gi\|702443943\|ref\|XP_010024180.1\|	1.4e-55	63.3	PREDICTED: major pollen allerg...	[more]
gi\|743904736\|ref\|XP_011045748.1\|	4.9e-53	60.9	PREDICTED: major pollen allerg...	[more]
gi\|357503585\|ref\|XP_003622081.1\|	2.4e-52	60.3	RALF-like protein [Medicago tr...	[more]

BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QAU3_SPIOL	2.3e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C7U8_BETVU	6.6e-81	86.2	Uncharacterized protein OS=Bet...	[more]
A0A059B3Z8_EUCGR	9.6e-56	63.3	Uncharacterized protein OS=Euc...	[more]
B7FIQ2_MEDTR	1.7e-52	60.3	RALF-like protein OS=Medicago ...	[more]
A0A0A0LDJ0_CUCSA	2.9e-52	60.9	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo13963.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G41050.1	2.4e-50	53.7	Pollen Ole e 1 allergen and ex...	[more]
AT3G26960.1	6.1e-46	52.3	Pollen Ole e 1 allergen and ex...	[more]
AT5G13140.1	1.2e-44	56.9	Pollen Ole e 1 allergen and ex...	[more]
AT5G15780.1	1.3e-11	26.8	Pollen Ole e 1 allergen and ex...	[more]
AT5G45880.1	7.3e-7	32.9	Pollen Ole e 1 allergen and ex...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31614	FAMILY NOT NAMED	coord: 1..173 score: 1.8
None	No IPR available	PANTHER	PTHR31614:SF3	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 1..173 score: 1.8
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 39..137 score: 3.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0010286	heat acclimation
biological_process	GO:0030091	protein repair
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0048767	root hair elongation
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0090351	seedling development
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0015866	ADP transport
biological_process	GO:0010114	response to red light
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0006768	biotin metabolic process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0015867	ATP transport
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0048438	floral whorl development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0006397	mRNA processing
biological_process	GO:0048519	negative regulation of biological process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0048439	flower morphogenesis
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0009850	auxin metabolic process
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0006810	transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016556	mRNA modification
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0010051	xylem and phloem pattern formation
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0048046	apoplast
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005622	intracellular
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005778	peroxisomal membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005795	Golgi stack
cellular_component	GO:0009536	plastid
cellular_component	GO:0016020	membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0044464	cell part
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004077	biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0019146	arabinose-5-phosphate isomerase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0015217	ADP transmembrane transporter activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0005347	ATP transmembrane transporter activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0008375	acetylglucosaminyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0008430	selenium binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13783	0.79	Barchart \| Table
Spo00214	0.75	Barchart \| Table
Spo08935	0.75	Barchart \| Table
Spo10898	0.75	Barchart \| Table
Spo18778	0.75	Barchart \| Table
Spo26858	0.75	Barchart \| Table
Spo05307	0.75	Barchart \| Table
Spo08478	0.74	Barchart \| Table
Spo26355	0.72	Barchart \| Table
Spo09387	0.72	Barchart \| Table
Spo12228	0.72	Barchart \| Table
Spo00761	0.72	Barchart \| Table
Spo25008	0.72	Barchart \| Table
Spo27364	0.71	Barchart \| Table
Spo13393	0.71	Barchart \| Table
Spo18943	0.71	Barchart \| Table
Spo09769	0.71	Barchart \| Table
Spo10835	0.71	Barchart \| Table
Spo22451	0.70	Barchart \| Table
Spo26697	0.70	Barchart \| Table
Spo27081	0.70	Barchart \| Table
Spo00943	0.70	Barchart \| Table
Spo19822	0.70	Barchart \| Table
Spo19372	0.69	Barchart \| Table
Spo21833	0.69	Barchart \| Table
Spo17612	0.69	Barchart \| Table
Spo22167	0.68	Barchart \| Table
Spo01104	0.68	Barchart \| Table
Spo05125	0.68	Barchart \| Table
Spo07548	0.68	Barchart \| Table
Spo10864	0.68	Barchart \| Table
Spo10890	0.68	Barchart \| Table
Spo14225	0.68	Barchart \| Table
Spo21660	0.68	Barchart \| Table
Spo24081	0.68	Barchart \| Table
Spo24834	0.68	Barchart \| Table
Spo15461	0.67	Barchart \| Table
Spo25717	0.67	Barchart \| Table
Spo12370	0.67	Barchart \| Table
Spo20050	0.67	Barchart \| Table
Spo07236	0.67	Barchart \| Table
Spo09554	0.67	Barchart \| Table
Spo13691	0.67	Barchart \| Table
Spo21635	0.66	Barchart \| Table
Spo02480	0.66	Barchart \| Table
Spo14001	0.66	Barchart \| Table
Spo11688	0.66	Barchart \| Table
Spo18104	0.66	Barchart \| Table
Spo18605	0.66	Barchart \| Table
Spo19110	0.66	Barchart \| Table
Spo19123	0.66	Barchart \| Table
Spo08824	0.66	Barchart \| Table
Spo23382	0.66	Barchart \| Table
Spo24016	0.66	Barchart \| Table
Spo24325	0.66	Barchart \| Table
Spo24675	0.66	Barchart \| Table
Spo28265	0.66	Barchart \| Table
Spo05402	0.66	Barchart \| Table
Spo03572	0.66	Barchart \| Table
Spo26975	0.66	Barchart \| Table
Spo00205	0.66	Barchart \| Table
Spo06953	0.66	Barchart \| Table
Spo21144	0.65	Barchart \| Table
Spo09777	0.65	Barchart \| Table
Spo06335	0.65	Barchart \| Table
Spo09434	0.65	Barchart \| Table
Spo18223	0.65	Barchart \| Table
Spo01217	0.65	Barchart \| Table
Spo03592	0.65	Barchart \| Table
Spo12234	0.65	Barchart \| Table