Spo11436 (gene)

Overview
NameSpo11436
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit)
LocationSpoScf_00676 : 258036 .. 262417 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATCCCAATAAGTGGATGTGTTTATTACCCTATTGGATTGGAGCATAAGATCGTTATGATGGTAAGGAGACTAGTTGGAGAAAAGAATCTCAAAATTTCAGGTGAGATTGCGCAAGTTTGATGGAAAGCAGTATGATAAGCAGTTGAGAGATGGGGATCCTATTCCTGGGTACATCGTCATCCGATTCCGAGGTAGAGATGGAGGTTTAGGGTTCGTTGATCGCTACCCTGGTGAGTGGTGACGATTGGGATCACAAGTTGAACCAACGCTAGACAATATCTTATCCAAGAGCTCAACTGCACCTTTTATAGCTCTGTTTATGGATCCCAGCTTCTTATAACTCGTCTCCATCCGTCCCAGGATGCCCGTCTATTCATCAACCTCCTTCCGTCTTCTTCTTCTTCTTCTTCAACACGAGTACCACCTACCATCCTTTTCCAGGGTTTGCCTGATTGCTTTTTTCCCTCGCCAAAATTAGGGATCTTGATATGAAAAAATTCCATCCAATTTAAGAATTACAAGGAATNACCACCTACCATCCTTTTCCAGGGTTTGCCTGATTGCTTTTTTCCCTCGCCAAAATTAGGGATCTTGATATGAAAAAATTCCATCCAATTTAAGAATTACAAGGAATGTTACAAAGCATTGAAAAAATTGTCAAATCTGTAATGGAGGAATTAGGACCAGGTTACAACGAATCACCTAGCACTCGGCCTCTCAGTCTCAGGAACCGACTGTCAATGCTTAATAAGGAATTGAGCACTATGAAACTTGTACTGGAGGAATTTACCACTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATTGATAGAGATGAGGGTTCAAAGGCTCTGGAGATCCGAGTGGCAATGCTTGAAAACTACTTCGTATTAAAGATGCCATGGCGAGTACAGAAAAGAAAAAGAAAAAGAAACAGAAACAGAAAATAAAGGAATCTGCTCTTGGCTACAACAAATCACCTATGAGTCCGGCTCTCAAGCGTTGCAAACCCTTGACAAGGGATTCAACACTTGTAATGGAGGATTGTCCATTACTGATGACGCGTCGTTAGTCCGCCGTTAGTCCTCCTACCCCTATTTTAATACTTATTTCACCAAATACCCTTATTATGAAACATAATTCACCAAATATCCATAACTTAAAACTACCAATATTAATACTCAATGGCTAGGTTTTGTGTTTGAAAATTAGTCGTTACTTATTGTTTTCTTATAAATACTATTTTCTTTTCTGACTAGTAACATATAACAAGACAAGTGCTTAAAATTGTTATTTTCTTTTTTAACCCACCATGTTTCATTGGCTAGTCAAATCACCTTTCACAACCCAACAAAAATCAATTTACCCCCTCCGAAAATACAGCAGAAGAAGAAAAAAACAAACAACAATCGCAACTGAAAACTTCACTTCACTCCTCATCTTCTCTATCCGACTTGCGAGCCGAGCGATTAATGCATTCAAGGGTTTCACGACTAGCCGGCGCCGCGTATTTTCGGTGGTTGTCCACCGTTTCCACGGTGGCGCCGGCAGAAGCAGAGGAAATCTTCAGTGAAGCATGGAAGAAAGTGGTACCCCACGTAGACCCACCTAAAACTCCTCTCTCATTTATCCAACATCGACCTCCAATACCGACTTCAATACCTTCCAAACTCACCCTTAATTTCCATCTTCCCTACATTTCCCACCTTTCCAACAAAGAGGTACCATGAACTTTCTACTGTTAACTATTTTTGGGGTTTAACGTTAGTAAATGAATTGCTTGATTTTATTGGCCTGTTTTAATTGTGTTATGTGAATTTGTCAAAATGTTTGATTGTTTCTCTTGTTTTTCTTTGTTTGATGCTAGCAAATCAATTGTTTTAACGTATTGGCTTAATTTTTGGTTCATTTGTTTTCCGTTCCTTTTTAATTGTTGCTTTAACTAACTTTTTCCCTTCCATTTTAACGGTTGCTTTTGAATTATCGATATAACTTCCATCTTTAATAATTGTAGGTCAGTTATTATGAAATTGTGTCTAAATTATAAAAAATATGCATAAGAAAAGGTGAAATAAGAGTATTTCCAAGAGAAATTTATGAGAAATAATATTATCCAGGGAAAGCTTGATTGATGATTTCAGCTAAATATTGTGTTTGAGGCACTTCGTTTCTGTTTTTGATCATATTTTTTTTAAAAAAAANTTCAGCTAAATATTGTGTTTGAGGCACTTCGTTTCTGTTTTTGATCATATTTTTTTAAAAAAAAATGTGTGATGTGTTTGTTTCATCTTTGATCTTTGGACTTTGTAATTAGTCAGGGAAAATTAGGGCGATGTCTTGTTGATATCTTAGGACTTTGTAATTTGTACCTTCTCTTACAAAATTAGGACTTTGTAATTTGTACCTTCTCTTACAAAATGGAAACAAGAACGAGGTTATTTGCCTTAAGACTAGAGAACGAGGTTAATGGCCTTAAGACTAGACATTTTTGCTCTTTCAGACAAACTATAGCATATTGTTGTGTTAAGGACCTATTCCTATATGCCGACCTTTCTACTGGTTAGTGAAATACTCATCTATCAGCAGCAGAACAACTTATTGCAATTGATACAATTATTTTCCTTATAGTCTTACACTCTTAGGCTTTGTTTTGTTCACCTTATTTTCACTTACTTCAGGTGTAATAAGATAAAATAAGATTTAAAAAAAGGACAATAAACTCAAATAAGATAAGTTAACATAAGATAATATAAGATTAGTGACACACATTGATTCCAATACTGGATGTTGGTTTTCATTATCGATTCTGATGAAGAGATAGTGCCTTTTAGTTTCCCCAGCCATGGTACCTAAAAGCTGCTAAACATACTTGTGAACTTTATGCAAGTTACTCAGTCCAGAAAGGAAAACACTTTTTCAGTTCCGCAACTATGTATAAAATGAGAGAAGGAGAACGCTAGCTTTTGAGATGAGTGAAGACTGTTGATTGTTCAGAAATTCTTATTGAAATTTCACAGGATTTTCATCATTCCTAAGAAAATACTCAAATTAATTTTTTGTGGGATGCAATGGAATTATGTACCTTTGACTTTACTTGGTTTGTGTAGCATTTGAGTTTTGCTTCTGAATGGTGTGTTTGGCAATTGACATGCTACCGAGAAGTCAAGAACCTACTGTAATCACTGAACGGTGAAAGTTATCTGTTATGTAAAGAACTTGCATTAACAAAGGTCAAAACTTGAAATATGCAACTCTCTCTGAGATTAATTGGTAACCTGGCAGACTTTCTTATAATAAAGTCACAATTTTGTCTTTGCACTAACCTTATATTGATTCGATTGTATTTGATAGTTGCTTTTGCCTTGATTATGATTTGTAGAGTGAGCATGATTTTGAATAATTGTATGGGGAAAGCAACAAAAGACTCACCCTTGGCAGTTTGTACATATATGCAGGTTGATATGGTGATAGTGCCAGCAACAACTGGGCAGATGGGTGTTCTTCCGGGGCATACAGCAACCATGACAGAGTTGAAGCCGGGCATTCTCTCAATTCAGCAAGGCAACGAAACAACAAAGTATTTTGTCAGTGGTGGCTTTGCTTTCATCCATTCAAACTCTGTTGCAGACATAATCACAGTTGAGGCTGTTACTATTGATAAAATTGATCCAAACATGGTTAAAATAAAGCTTGCTGAATATTCACTGAAATTGAATACAGCCACAACAGATTATGAGAAAGCTGAAGCGCAAATTGGAGTAGATGTTCACAACGCCTTACAGTCTGCTCTCGCGGCCTAATATTTGCATTATCCTTTCCTGAAACATTTGACTGTCCAGTCTTCCTCAATGTACATGTGTCTAAGTGTATTGAAATTACAACTCTTTACCGATCTCTTTGGCCATAAGTTAGAACGAACATTGGTGCCAGTTTCTTGTGTTATTATCATGGCAAATGAATCTGTGAAAGAAAGTAGTTGGTAGTGTTTTTTTGGTGTGTACTTTCTCCTTGTTTCCTGCTACTATCAAATGCCTGTGGCTCGACAGCTCATCAACCACGGGCGTAGTTGGACCTAGCAGGTATTTTATGTTGAACAGCTTAAGCTTCCGTTAGACCGGTTTTAATCCGTAAACACATGATACTAACATTTTTACATGTCATGTGTCATCCTCTAGAGCATATTAGATGCACTCGGGTGTACCGTGTACCCTCTCACATTTTCTCTTTACATGTGAGGAAAAATGCGGCAGGGACTACCAATGGGTATAAAAATACCCTTGAGTACACAATATGACAATACACCCGGGTGCACCTAATAATTTTCAGTCATCTTCCCCCTCCTTGTTTCCTTTTTTTTTTAAAGCCACCACTCGATCTCAT

mRNA sequence

TAATCCCAATAAGTGGATGTGTTTATTACCCTATTGGATTGGAGCATAAGATCGTTATGATGGTAAGGAGACTAGTTGGAGAAAAGAATCTCAAAATTTCAGGTGAGATTGCGCAAGTTTGATGGAAAGCAGTATGATAAGCAGTTGAGAGATGGGGATCCTATTCCTGGGTACATCGTCATCCGATTCCGAGGTAGAGATGGAGGTTTAGGGTTCGTTGATCGCTACCCTGGTGAGTGGTGACGATTGGGATCACAAGTTGAACCAACGCTAGACAATATCTTATCCAAGAGCTCAACTGCACCTTTTATAGCTCTGTTTATGGATCCCAGCTTCTTATAACTCGTCTCCATCCGTCCCAGGATGCCCGTCTATTCATCAACCTCCTTCCGTCTTCTTCTTCTTCTTCTTCAACACGAGTACCACCTACCATCCTTTTCCAGGGTTTGCCTGATTGCTTTTTTCCCTCGCCAAAATTAGGGATCTTGATATGAAAAAATTCCATCCAATTTAAGAATTACAAGGAATNACCACCTACCATCCTTTTCCAGGGTTTGCCTGATTGCTTTTTTCCCTCGCCAAAATTAGGGATCTTGATATGAAAAAATTCCATCCAATTTAAGAATTACAAGGAATGTTACAAAGCATTGAAAAAATTGTCAAATCTGTAATGGAGGAATTAGGACCAGGTTACAACGAATCACCTAGCACTCGGCCTCTCAGTCTCAGGAACCGACTGTCAATGCTTAATAAGGAATTGAGCACTATGAAACTTGTACTGGAGGAATTTACCACTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATTGATAGAGATGAGGGTTCAAAGGCTCTGGAGATCCGAGTGGCAATGCTTGAAAACTACTTCGTATTAAAGATGCCATGGCGAGTACAGAAAAGAAAAAGAAAAAGAAACAGAAACAGAAAATAAAGGAATCTGCTCTTGGCTACAACAAATCACCTATGAGTCCGGCTCTCAAGCGTTGCAAACCCTTGACAAGGGATTCAACACTTGTAATGGAGGATTGTCCATTACTGATGACGCGTCGTTAGTCCGCCGTTAGTCCTCCTACCCCTATTTTAATACTTATTTCACCAAATACCCTTATTATGAAACATAATTCACCAAATATCCATAACTTAAAACTACCAATATTAATACTCAATGGCTAGGTTTTGTGTTTGAAAATTAGTCGTTACTTATTGTTTTCTTATAAATACTATTTTCTTTTCTGACTAGTAACATATAACAAGACAAGTGCTTAAAATTGTTATTTTCTTTTTTAACCCACCATGTTTCATTGGCTAGTCAAATCACCTTTCACAACCCAACAAAAATCAATTTACCCCCTCCGAAAATACAGCAGAAGAAGAAAAAAACAAACAACAATCGCAACTGAAAACTTCACTTCACTCCTCATCTTCTCTATCCGACTTGCGAGCCGAGCGATTAATGCATTCAAGGGTTTCACGACTAGCCGGCGCCGCGTATTTTCGGTGGTTGTCCACCGTTTCCACGGTGGCGCCGGCAGAAGCAGAGGAAATCTTCAGTGAAGCATGGAAGAAAGTGGTACCCCACGTAGACCCACCTAAAACTCCTCTCTCATTTATCCAACATCGACCTCCAATACCGACTTCAATACCTTCCAAACTCACCCTTAATTTCCATCTTCCCTACATTTCCCACCTTTCCAACAAAGAGGTTGATATGGTGATAGTGCCAGCAACAACTGGGCAGATGGGTGTTCTTCCGGGGCATACAGCAACCATGACAGAGTTGAAGCCGGGCATTCTCTCAATTCAGCAAGGCAACGAAACAACAAAGTATTTTGTCAGTGGTGGCTTTGCTTTCATCCATTCAAACTCTGTTGCAGACATAATCACAGTTGAGGCTGTTACTATTGATAAAATTGATCCAAACATGGTTAAAATAAAGCTTGCTGAATATTCACTGAAATTGAATACAGCCACAACAGATTATGAGAAAGCTGAAGCGCAAATTGGAGTAGATGTTCACAACGCCTTACAGTCTGCTCTCGCGGCCTAATATTTGCATTATCCTTTCCTGAAACATTTGACTGTCCAGTCTTCCTCAATGTACATGTGTCTAAGTGTATTGAAATTACAACTCTTTACCGATCTCTTTGGCCATAAGTTAGAACGAACATTGGTGCCAGTTTCTTGTGTTATTATCATGGCAAATGAATCTGTGAAAGAAAGTAGTTGGTAGTGTTTTTTTGGTGTGTACTTTCTCCTTGTTTCCTGCTACTATCAAATGCCTGTGGCTCGACAGCTCATCAACCACGGGCGTAGTTGGACCTAGCAGGTATTTTATGTTGAACAGCTTAAGCTTCCGTTAGACCGGTTTTAATCCGTAAACACATGATACTAACATTTTTACATGTCATGTGTCATCCTCTAGAGCATATTAGATGCACTCGGGTGTACCGTGTACCCTCTCACATTTTCTCTTTACATGTGAGGAAAAATGCGGCAGGGACTACCAATGGGTATAAAAATACCCTTGAGTACACAATATGACAATACACCCGGGTGCACCTAATAATTTTCAGTCATCTTCCCCCTCCTTGTTTCCTTTTTTTTTTAAAGCCACCACTCGATCTCAT

Coding sequence (CDS)

ATGCATTCAAGGGTTTCACGACTAGCCGGCGCCGCGTATTTTCGGTGGTTGTCCACCGTTTCCACGGTGGCGCCGGCAGAAGCAGAGGAAATCTTCAGTGAAGCATGGAAGAAAGTGGTACCCCACGTAGACCCACCTAAAACTCCTCTCTCATTTATCCAACATCGACCTCCAATACCGACTTCAATACCTTCCAAACTCACCCTTAATTTCCATCTTCCCTACATTTCCCACCTTTCCAACAAAGAGGTTGATATGGTGATAGTGCCAGCAACAACTGGGCAGATGGGTGTTCTTCCGGGGCATACAGCAACCATGACAGAGTTGAAGCCGGGCATTCTCTCAATTCAGCAAGGCAACGAAACAACAAAGTATTTTGTCAGTGGTGGCTTTGCTTTCATCCATTCAAACTCTGTTGCAGACATAATCACAGTTGAGGCTGTTACTATTGATAAAATTGATCCAAACATGGTTAAAATAAAGCTTGCTGAATATTCACTGAAATTGAATACAGCCACAACAGATTATGAGAAAGCTGAAGCGCAAATTGGAGTAGATGTTCACAACGCCTTACAGTCTGCTCTCGCGGCCTAA

Protein sequence

MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVDVHNALQSALAA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11436.1Spo11436.1mRNA


Homology
[Close]
BLAST of Spo11436.1 vs. NCBI nr
Match: gi|902235781|gb|KNA24084.1| (hypothetical protein SOVF_018380 [Spinacia oleracea])

HSP 1 Score: 385.2 bits (988), Expect = 6.900e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

		  

Query: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60
           MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP
Sbjct: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60

Query: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120
           TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN
Sbjct: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120

Query: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180
           ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE
Sbjct: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180

Query: 181 AQIGVDVHNALQSALAA 198
           AQIGVDVHNALQSALAA
Sbjct: 181 AQIGVDVHNALQSALAA 197
[Close]
BLAST of Spo11436.1 vs. NCBI nr
Match: gi|731360759|ref|XP_010691993.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 298.9 bits (764), Expect = 6.500e-78
Identity = 151/195 (77.44%), Postives = 170/195 (87.18%), Query Frame = 1 

		  

Query: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60
           M  R SR+AGAA FR  ST  T APAEAEE+F EAWKKVVPH++PPKTPLSFIQH PPIP
Sbjct: 1   MLPRASRIAGAAVFRRFSTGFTTAPAEAEEMFKEAWKKVVPHINPPKTPLSFIQHPPPIP 60

Query: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120
           TSIP+KL LN +LPY SHLSNK+VDMVI+PATTG+MG+ PGHTA MTELKPGILS+ +GN
Sbjct: 61  TSIPAKLILNLYLPYSSHLSNKQVDMVIMPATTGEMGIRPGHTAIMTELKPGILSLLEGN 120

Query: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180
           ETTKYFVSGGFAFIH NSVADIIT+EAV ID+IDPNMV+  +AE S KL++ATTDYEK E
Sbjct: 121 ETTKYFVSGGFAFIHPNSVADIITLEAVPIDRIDPNMVQKGIAELSQKLSSATTDYEKTE 180

Query: 181 AQIGVDVHNALQSAL 196
           AQIG+DVH ALQSAL
Sbjct: 181 AQIGIDVHTALQSAL 195
[Close]
BLAST of Spo11436.1 vs. NCBI nr
Match: gi|695025897|ref|XP_009400218.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Musa acuminata subsp. malaccensis])

HSP 1 Score: 250.0 bits (637), Expect = 3.500e-63
Identity = 124/185 (67.03%), Postives = 155/185 (83.78%), Query Frame = 1 

		  

Query: 12  AYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPSKLTLNF 71
           A FR  ST    AP+E +  F EAW+KV P++DPPKTPL+F++ RPP P+SIPSKLT+NF
Sbjct: 22  ASFRPFSTDLPAAPSE-DTAFVEAWRKVAPNIDPPKTPLAFMKPRPPTPSSIPSKLTVNF 81

Query: 72  HLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYFVSGGF 131
            +PY S +SNKEVDMVIVPATTGQMGVLPGH AT+ ELKPG+LS+ +GNE TKYFVS GF
Sbjct: 82  VIPYQSEISNKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNEVTKYFVSSGF 141

Query: 132 AFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVDVHNAL 191
           AF+H+NSV DI+ VEAV +D+IDP++V+  LA+++ KLN+ATTD EKAEAQIGVDVH+AL
Sbjct: 142 AFVHANSVTDIVAVEAVPVDRIDPSLVQKGLADFTQKLNSATTDLEKAEAQIGVDVHSAL 201

Query: 192 QSALA 197
            +AL+
Sbjct: 202 NAALS 205
[Close]
BLAST of Spo11436.1 vs. NCBI nr
Match: gi|743778723|ref|XP_010919828.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Elaeis guineensis])

HSP 1 Score: 249.2 bits (635), Expect = 5.900e-63
Identity = 129/192 (67.19%), Postives = 157/192 (81.77%), Query Frame = 1 

		  

Query: 4   RVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSI 63
           R  RL G A+    ST   VAP E +  F EAWKKV P+++PPKTPLSF++ RPP P+SI
Sbjct: 17  RGGRLIGRAF----STGVPVAPVE-DSAFVEAWKKVAPNLEPPKTPLSFMKPRPPTPSSI 76

Query: 64  PSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETT 123
           PSKLT+NF LPY S +SNKEVDMVIVPATTGQMGVLPGH AT+ ELKPG+LS+  GNE T
Sbjct: 77  PSKLTVNFVLPYQSEISNKEVDMVIVPATTGQMGVLPGHVATIAELKPGLLSVHDGNEVT 136

Query: 124 KYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQI 183
           KYFVS GFAFIH+NS+ADI+ VEAV +D+IDP++V+  LA+++ KL++ATTD EKAEAQI
Sbjct: 137 KYFVSSGFAFIHANSIADIVAVEAVPVDRIDPSLVQKGLADFTQKLSSATTDLEKAEAQI 196

Query: 184 GVDVHNALQSAL 196
           GVDVH+AL +AL
Sbjct: 197 GVDVHSALNAAL 203
[Close]
BLAST of Spo11436.1 vs. NCBI nr
Match: gi|965610738|dbj|BAT96877.1| (hypothetical protein VIGAN_09019000 [Vigna angularis var. angularis])

HSP 1 Score: 247.7 bits (631), Expect = 1.700e-62
Identity = 128/190 (67.37%), Postives = 154/190 (81.05%), Query Frame = 1 

		  

Query: 6   SRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPS 65
           S L   A  R LST     P+ AE  F EAWKKV P++DPPKTPLSF++ RPPIP+++PS
Sbjct: 7   SALLSGASRRRLSTDVPATPS-AESSFVEAWKKVSPNLDPPKTPLSFLKERPPIPSTLPS 66

Query: 66  KLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKY 125
           KLT+NF LPY S LS KEVDMVIVPATTGQMGVLPGH AT+ ELKPG+LS+ +GN+ TKY
Sbjct: 67  KLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKY 126

Query: 126 FVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGV 185
           FVS GFAF+H+NSVADI+ VEAV ID+ID N+V+  L +++ KLN+A+TD EKAEAQIGV
Sbjct: 127 FVSSGFAFVHANSVADIVAVEAVPIDRIDANLVQKGLQDFTQKLNSASTDLEKAEAQIGV 186

Query: 186 DVHNALQSAL 196
           DVH+AL SAL
Sbjct: 187 DVHSALNSAL 195
[Close]
BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYR6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018380 PE=3 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 4.800e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

		  

Query: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60
           MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP
Sbjct: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60

Query: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120
           TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN
Sbjct: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120

Query: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180
           ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE
Sbjct: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180

Query: 181 AQIGVDVHNALQSALAA 198
           AQIGVDVHNALQSALAA
Sbjct: 181 AQIGVDVHNALQSALAA 197
[Close]
BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E9X1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017300 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.500e-78
Identity = 151/195 (77.44%), Postives = 170/195 (87.18%), Query Frame = 1 

		  

Query: 1   MHSRVSRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIP 60
           M  R SR+AGAA FR  ST  T APAEAEE+F EAWKKVVPH++PPKTPLSFIQH PPIP
Sbjct: 1   MLPRASRIAGAAVFRRFSTGFTTAPAEAEEMFKEAWKKVVPHINPPKTPLSFIQHPPPIP 60

Query: 61  TSIPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGN 120
           TSIP+KL LN +LPY SHLSNK+VDMVI+PATTG+MG+ PGHTA MTELKPGILS+ +GN
Sbjct: 61  TSIPAKLILNLYLPYSSHLSNKQVDMVIMPATTGEMGIRPGHTAIMTELKPGILSLLEGN 120

Query: 121 ETTKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAE 180
           ETTKYFVSGGFAFIH NSVADIIT+EAV ID+IDPNMV+  +AE S KL++ATTDYEK E
Sbjct: 121 ETTKYFVSGGFAFIHPNSVADIITLEAVPIDRIDPNMVQKGIAELSQKLSSATTDYEKTE 180

Query: 181 AQIGVDVHNALQSAL 196
           AQIG+DVH ALQSAL
Sbjct: 181 AQIGIDVHTALQSAL 195
[Close]
BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Match: M0SXZ3_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.400e-63
Identity = 124/185 (67.03%), Postives = 155/185 (83.78%), Query Frame = 1 

		  

Query: 12  AYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPSKLTLNF 71
           A FR  ST    AP+E +  F EAW+KV P++DPPKTPL+F++ RPP P+SIPSKLT+NF
Sbjct: 22  ASFRPFSTDLPAAPSE-DTAFVEAWRKVAPNIDPPKTPLAFMKPRPPTPSSIPSKLTVNF 81

Query: 72  HLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYFVSGGF 131
            +PY S +SNKEVDMVIVPATTGQMGVLPGH AT+ ELKPG+LS+ +GNE TKYFVS GF
Sbjct: 82  VIPYQSEISNKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNEVTKYFVSSGF 141

Query: 132 AFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVDVHNAL 191
           AF+H+NSV DI+ VEAV +D+IDP++V+  LA+++ KLN+ATTD EKAEAQIGVDVH+AL
Sbjct: 142 AFVHANSVTDIVAVEAVPVDRIDPSLVQKGLADFTQKLNSATTDLEKAEAQIGVDVHSAL 201

Query: 192 QSALA 197
            +AL+
Sbjct: 202 NAALS 205
[Close]
BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SVH3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G019000 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 128/190 (67.37%), Postives = 154/190 (81.05%), Query Frame = 1 

		  

Query: 6   SRLAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPS 65
           S L   A  R LST     P+ AE  F EAWKKV P++DPPKTPLSF++ RPPIP+++PS
Sbjct: 7   SALLSGASRRRLSTDVPATPS-AESSFVEAWKKVSPNLDPPKTPLSFLKERPPIPSTLPS 66

Query: 66  KLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKY 125
           KLT+NF LPY S LS KEVDMVIVPATTGQMGVLPGH AT+ ELKPG+LS+ +GN+ TKY
Sbjct: 67  KLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKY 126

Query: 126 FVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGV 185
           FVS GFAF+H+NSVADI+ VEAV ID+ID N+V+  L +++ KLN+A+TD EKAEAQIGV
Sbjct: 127 FVSSGFAFVHANSVADIVAVEAVPIDRIDANLVQKGLQDFTQKLNSASTDLEKAEAQIGV 186

Query: 186 DVHNALQSAL 196
           DVH+AL SAL
Sbjct: 187 DVHSALNSAL 195
[Close]
BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Match: W9QU14_9ROSA (ATP synthase subunit delta OS=Morus notabilis GN=L484_008025 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.700e-62
Identity = 122/177 (68.93%), Postives = 149/177 (84.18%), Query Frame = 1 

		  

Query: 21  STVAPAE--AEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPSKLTLNFHLPYISH 80
           ST  PA    +  F+EAWKKV+P+++PPKTPLSF+Q RPPIP+S+PSKLT+NF LPY S 
Sbjct: 24  STDVPAAQTGDSAFAEAWKKVIPNIEPPKTPLSFMQPRPPIPSSVPSKLTVNFVLPYASE 83

Query: 81  LSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYFVSGGFAFIHSNS 140
           LS KEVDMVI+PATTGQMGVLPGH +T+ ELKPG+LS+ +GN+ TKYFVS GFAFIH+NS
Sbjct: 84  LSAKEVDMVIIPATTGQMGVLPGHVSTIAELKPGVLSVHEGNDVTKYFVSSGFAFIHANS 143

Query: 141 VADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVDVHNALQSAL 196
             DII VEAV +D+IDPN V+  LAE++ KL++ATTD EKAEAQIGVD+H+AL SAL
Sbjct: 144 FTDIIAVEAVPLDRIDPNQVQKGLAEFTQKLSSATTDLEKAEAQIGVDMHSALNSAL 200
[Close]
BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.000e-63
Identity = 124/190 (65.26%), Postives = 152/190 (80.00%), Query Frame = 1 

		  

Query: 8   LAGAAYFRWLSTVSTVAPAE--AEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPS 67
           LA A    W    ST  PAE  A+  F EAWKK++P+VDPPKTP +++  RP  P+SIPS
Sbjct: 9   LARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPATPSSIPS 68

Query: 68  KLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKY 127
           KLT+NF LPY S L+ KEVDMVI+PATTGQMGVLPGH AT+ ELKPG++S+ +GN+ +KY
Sbjct: 69  KLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKY 128

Query: 128 FVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGV 187
           FVSGGFAFIH+NS ADII VEAV +D+ID N+V+  LAE++ KLNTA+TD EKAEAQIGV
Sbjct: 129 FVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGV 188

Query: 188 DVHNALQSAL 196
           DVH+AL +AL
Sbjct: 189 DVHSALNAAL 198
[Close]
BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.300e-57
Identity = 114/188 (60.64%), Postives = 148/188 (78.72%), Query Frame = 1 

		  

Query: 8   LAGAAYFRWLSTVSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTSIPSKL 67
           L+ A+  R  ST   VA       F EAW+KV P++DPPKTPL F++ RPP+P++IP+KL
Sbjct: 10  LSRASATRRFST--DVATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKL 69

Query: 68  TLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYFV 127
           T+NF LPY S L+ KEVD VI+PATTG+MGVLPGH AT+ ELKPG+L++Q+G +TTKYFV
Sbjct: 70  TVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFV 129

Query: 128 SGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVDV 187
           S GF FIH+NSVADII VEAV ++++D ++V+  L E++ KLN+ATTD EK EAQIG+DV
Sbjct: 130 SSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDV 189

Query: 188 HNALQSAL 196
            +AL SAL
Sbjct: 190 DSALNSAL 195
[Close]
BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.700e-57
Identity = 114/194 (58.76%), Postives = 150/194 (77.32%), Query Frame = 1 

		  

Query: 5   VSRLAGAAYFRWLST--VSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTS 64
           +SR   AA  + ++T   ST  P+  +  F EAWKKV P++DPP+TP +F++ RP  P+S
Sbjct: 9   LSRSVAAASSKSVTTRAFSTELPSTLDSTFVEAWKKVAPNMDPPQTPSAFMKPRPSTPSS 68

Query: 65  IPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNET 124
           IP+KLT+NF LPY S L+ KEVDMVI+PA+TGQMGVLPGH  T+ ELKPGI+S+ +G + 
Sbjct: 69  IPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDV 128

Query: 125 TKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQ 184
            KYF+S GFAF+H+NSVADII VEAV +D IDP+ V+  LAE+  KL +ATTD EKAEAQ
Sbjct: 129 KKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQ 188

Query: 185 IGVDVHNALQSALA 197
           IGV+VH+A+ +AL+
Sbjct: 189 IGVEVHSAINAALS 202
[Close]
BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.200e-16
Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 1 

		  

Query: 63  IPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNET 122
           I  KL L+  LP+ +  S+++V  V +PA +G MG+L  H  ++  L+PG++ + + + +
Sbjct: 28  ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGS 87

Query: 123 TKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQ 182
            K+FVSGGFA +H N+   I  VEA  ++      ++  L E +     + ++ +K EAQ
Sbjct: 88  QKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQ 147

Query: 183 IGVDVHNALQSALA 197
           I  +V+ ALQ ALA
Sbjct: 148 IEAEVYEALQHALA 161
[Close]
BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ATP16 PE=3 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.200e-16
Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 1 

		  

Query: 67  LTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNETTKYF 126
           L L F LP+ +  S   V  V +PA +GQ+G+L  H  T+ +L PG++ + +G+ + K+F
Sbjct: 31  LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFF 90

Query: 127 VSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQIGVD 186
           VSGGFA +  +S   I +VEA  ++   P  V+  LAE    +++A  +   AEA I ++
Sbjct: 91  VSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSA-DEVAAAEAAIQLE 150

Query: 187 VHNALQSAL 196
           V  ALQ+AL
Sbjct: 151 VLEALQAAL 158
[Close]
BLAST of Spo11436.1 vs. TAIR (Arabidopsis)
Match: AT5G47030.1 (ATPase, F1 complex, delta/epsilon subunit)

HSP 1 Score: 223.8 bits (569), Expect = 9.400e-59
Identity = 114/194 (58.76%), Postives = 150/194 (77.32%), Query Frame = 1 

		  

Query: 5   VSRLAGAAYFRWLST--VSTVAPAEAEEIFSEAWKKVVPHVDPPKTPLSFIQHRPPIPTS 64
           +SR   AA  + ++T   ST  P+  +  F EAWKKV P++DPP+TP +F++ RP  P+S
Sbjct: 9   LSRSVAAASSKSVTTRAFSTELPSTLDSTFVEAWKKVAPNMDPPQTPSAFMKPRPSTPSS 68

Query: 65  IPSKLTLNFHLPYISHLSNKEVDMVIVPATTGQMGVLPGHTATMTELKPGILSIQQGNET 124
           IP+KLT+NF LPY S L+ KEVDMVI+PA+TGQMGVLPGH  T+ ELKPGI+S+ +G + 
Sbjct: 69  IPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDV 128

Query: 125 TKYFVSGGFAFIHSNSVADIITVEAVTIDKIDPNMVKIKLAEYSLKLNTATTDYEKAEAQ 184
            KYF+S GFAF+H+NSVADII VEAV +D IDP+ V+  LAE+  KL +ATTD EKAEAQ
Sbjct: 129 KKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQ 188

Query: 185 IGVDVHNALQSALA 197
           IGV+VH+A+ +AL+
Sbjct: 189 IGVEVHSAINAALS 202
The following BLAST results are available for this feature:
BLAST of Spo11436.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235781|gb|KNA24084.1|6.9e-104100.hypothetical protein SOVF_0183... [more]
gi|731360759|ref|XP_010691993.1|6.5e-7877.4PREDICTED: ATP synthase subuni... [more]
gi|695025897|ref|XP_009400218.1|3.5e-6367.0PREDICTED: ATP synthase subuni... [more]
gi|743778723|ref|XP_010919828.1|5.9e-6367.1PREDICTED: ATP synthase subuni... [more]
gi|965610738|dbj|BAT96877.1|1.7e-6267.3hypothetical protein VIGAN_090... [more]
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BLAST of Spo11436.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RYR6_SPIOL4.8e-104100.Uncharacterized protein OS=Spi... [more]
A0A0J8E9X1_BETVU4.5e-7877.4Uncharacterized protein OS=Bet... [more]
M0SXZ3_MUSAM2.4e-6367.0Uncharacterized protein OS=Mus... [more]
A0A0S3SVH3_PHAAN1.2e-6267.3Uncharacterized protein OS=Vig... [more]
W9QU14_9ROSA2.7e-6268.9ATP synthase subunit delta OS=... [more]
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BLAST of Spo11436.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATP4_IPOBA2.0e-6365.2ATP synthase subunit delta', m... [more]
ATP4_PEA1.3e-5760.6ATP synthase subunit delta', m... [more]
ATP4_ARATH1.7e-5758.7ATP synthase subunit delta', m... [more]
ATPD_AGABI3.2e-1635.0ATP synthase subunit delta, mi... [more]
ATPD_KLULA4.2e-1637.9ATP synthase subunit delta, mi... [more]
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BLAST of Spo11436.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G47030.19.4e-5958.7ATPase, F1 complex, delta/epsi... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001469ATPase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 65..185
score: 13
IPR001469ATPase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 1..195
score: 1.0
IPR001469ATPase, F1 complex, delta/epsilon subunitTIGRFAMsTIGR01216TIGR01216coord: 81..183
score: 2.4
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 73..153
score: 2.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalGENE3D2.60.15.10coord: 57..153
score: 9.4
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 80..139
score: 1.1
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalunknownSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 67..148
score: 5.75
NoneNo IPR availableunknownCoilCoilcoord: 162..182
scor
NoneNo IPR availableGENE3D1.20.5.440coord: 154..195
score: 1.
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 1..195
score: 1.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0010048 vernalization response
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0000373 Group II intron splicing
biological_process GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006972 hyperosmotic response
biological_process GO:0006096 glycolytic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006833 water transport
biological_process GO:0007030 Golgi organization
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009579 thylakoid
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0009536 plastid
cellular_component GO:0005730 nucleolus
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0005515 protein binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
RNA-Seq Expression