Spo24278 (gene) | SpinachBase

Overview


Name	Spo24278
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing protein, putative
Location	SpoScf_00708 : 180067 .. 191073 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGACAAATTTACCTTGTCAAGCTTCCGATTGTAATGATAATGGAGGTTAGGATGAAAACAATAGAATTCCTTTTTTTTTAGTAATTAAACTGTTGGGCGGCAGGTTTTGGGAGGAATTTTGGTGAAAACATATCGCGCTCAAAAGGGTGCTAATGGCGGTATTCACTAAATTGTTTCCCCCTACATTTACTGGTTTCCCCCCAAATGGAAAATTCAATTGCTGACATGTCCATTGCCCATTGCAGGGTATGGTGACTAGACCTACCCTGAGGGTAAGTATATGAGCTCCCATTCCATTTACTTTTGAAACAGGAATTCTGATACCGGCAGTGATCATAGACAGTCGTTAGAATAGGTATGGTTGGTTGAGATGTTTAGCTTGAAGGGCTATCTGGGAGCTCGAGAAGAGCATAGATAAATGAGCACTGCATGTTTAGTGCTATAGAGGTGTGGCTTGAATGCTTGATAATCCTTGTTTGATGACAATCTTGATAACAACTATTAGATGTATTAGTTCTGTGTAAACCTGCATCTTTGATATAAAATACTACTGATTTACTGCTGCTGAAGCTTGGTTATGTTTTCCTATTGTTGTTTATTCAGAAGAATGCCAAAGCTGTCTTTTTATTTTTGAAGGAAGGACAACACTATGATTTTAAGACACAGAAATTTACTACTTCCTATTTGAATCTCCGTACAAACTAGATGTTAACTTGTTCGAGTTGTTTCATAGTTTCATGTACAGATTTACTTCATTTCTTACCACATAGCATAGGTCATAGGGCATCAAAAAGCTCATTCAGACACTTTGGAAAAGGCATTAGATGGGATTTTATGTTTCTCAAGTAACCTTATACAATACGACTAACAATTATAAGCATACTCGTGCTTAGACCTCATGTGAACACTTATTTTAACGTTTTTCCACTTGCTTTTTAATGTCCTCTTATCCCTATCCCTCGTACCAAACGACCTTTTAAACCTTTAAACTTTTAACTAAATACGACATTAACTACTACTCGAATCTTCATTTAAAATAAAATACCCCAAAATCATGAATGATCATAGGTGCGAATCACGATATAGTATCATAAAACATACCCTCGAAGTCTAGATAGACAATGAAAATTGTAACCCAATCATCAACATTTTGGCTAATAGCCTAGTACTCTAGTAGTCAGTTAATCACTAGTCACATACTCTAACCGTGAGGCGTCAACCTATGCTTTGCAGCCAGTGGCGAACCTATAGTGGGTCTCCGGTGGGTCAAATGACCCAGCAAATTTTCTTTTTTAAAAAAATTAAAGGCAAAATTGTCAAAAAGTACCTGCTTTTTGCCTCACTTTGTGAACTAGTACCTTATGTTTTTAGTTTTGTCAAATAGTACCTTGAATTAAAAATGGTACCTTATAGCAACATTCGTCCAAATTATCANTAGTTTTGTCAAATAGTACCTTGAATTAAAAATGGTACCTTATAGCAACATTCGTCCAAATTATCAATTTTCCGGCCATTGATTTCATTTGTTGGCACAATTTGAGAGGGAAATCAGCGCGTGTGAACACACACTCATCAACTAACCACATTCAACGTTTTCAGCTTCCTTTCTTCTTCTCATTTACTCNACACACACTCATCAACTAACCACATTCAACGTTTTCAGCTTCCTTTCTTCTTCTCATTTACTCTTCTGTATTCTCTGCTCAAATTAACCCCCTCAAATGGTGCCTTTATTTATTCCAGACTACCAAAACAAATGATTCGCCATCTTCCTAAGCTTACAAATAATTGATAATTTGTAGGTTCTTGATATGNAAACAAATGATTCGCCATCTTCCTAAGCTTACAAATAATTGATAATTTGTAGGTTCTTGATATGAAGTATCTCGTGCTACGTTCTTTTCCTCTCTCTTAATTTCGAGTAAGTCGATATATAAACAACATCATTGCATAATCTTCATCAATTCCACCATATTTACTACAACACAAACCTTATCTACATCGATGGCACATAACGAGAACCACAAGATATCTTATTACTTATTCATGGTGGTTATTCTTTCCCATTTCAGATCAATGTAAGTTCACTCGATCACCTTAAACACAGAAGTTGATGTCCTTCNCTTTCCCATTTCAGATCAATGTAAGTTCACTCGATCACCTTAAACACAGAAGTTGATGTCCTTCGGGCCTTAAAAGAAGGGATTGATCCAAACTTCATTCATACCAATTCATTCATCAGTTCCTGGGATTTTGCACTTGACCCTTGTGAGAGAACAAGGGCTCACTTCCTCGACATCCTCTTCTCAATTCGCAAAAGGAAGCCCACTGTTACATGTGGAACAAAATCTTCGAAGAGAAGATATCTGCAATCGGAGTAAATTACAACAATGAATTTCAATTGATTACAATTTGCACCAAAAAAATTAAGAAGAGTAACATAGACGCGTGATTTTTGTCTTGGTTTGTTTAACACTCACATGTTTTTGGAGGGAAACTTGAATCAATGGTCGGAGAATTGATAATTTGGCCGGAATATTGCTATAAGGTACCGTTTTTAATACAACTTTTTAATTCAAGGTATTATTTTAGACTTAAAAGATAAGGTTGTGCTCCCTCCGTCCCATAATATAGTGCCCGTTTGACCAAAATCACGGTTATTAAGGTAAAGGATAACATTGATAATAAAAACAATAATGATTTGTACTTTCAAGATAAAGTACATGTTAGTTGGCAAAAATGGAGAGATAAATTATAGATTAAAGGTGTGTACATAATAAATAGGCCTAAAAAGGACAAAAATCAAGCACATGGGTTGAATAAAAGTCAAAAAGTACAATTTTCAAAGTAAAAATTAATGGTTTAAAATAGAAATAGGCACATCATTTAGGGACACCATTTTAGGAAAACAGGCACTATATTATGGGACGGAGGGAGTAGTTCACAAAGTGAGGAAACAAGTACTTTTTGACAATTTTTCCAAAATTAAAAGTTAAAATTTTCGCCCAAAATTTAGACGTGAAAGGCCATTCACACAATCTGGCCTATTTCGCGAAAAGCTCTTTCTCTCCTCTCCAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGGTCCGCCCCTCACCATTCACGAATCACGAGTGCTTAATTTCTTGAGTATGAGTAAATTGGCAGCTCGNCTTTCCCATTTCAGATCAATGTAAGTTCACTCGATCACCTTAAACACAGAAGTTGATGTCCTTCAGACCTTAAAAGAAGGGATTGATCCAAACTTCATTCCTACCAATTCATTCATCAGTTCCTGGGATTTTGCACTTGACCCTTGTGAGAGAACAGGGGCTCACTTCCTCGACATCCTCTTCTCAATTCGCAAAAGGAAGCCCACAGTTACATGTGGAACAAAATCTTCGAAGAGAAGATATCTGCAATCGGAGTAAATTACAACAATGAATTTCAATTGATTACAATTTGCACCAAAAAAATTAAGAAGAGTAACAGAGACGCGTGATTTTTGTCTTGGTTTGTTTAACACTCACATGTTTTTGGAGGGAAACTTGAATCAATGGTCGGAGAATTGATAATTTGGCCGGAATGTTGCTATAAGGTACCGTTTTTAATACAATTTTTTAATTCAAGGTATTATTTGACAAGACTTAAAAGATAAGGTTGTAGTTCACAAAGTGAGGAAACAAGAGGTACTTTTTGACAATTTTTCGAAAATTAAAGGCAAATTTGTTAAAAAGGACCTTTTATAATCCAAATTTTGCGAGAAAGGACCTTATATATTTTTTTTTGTGAAATAACACCTTAATGTAAATTTTTTTGCGAGAAAGGACCTTATATAAATTTTTTTTGTGAAATCACACATTAATGTAATTTTTTTTGCGAAAGACAACCAAGAGTAAATTTCCGGCATTGACTGAGTTTTTTCCGGCCATTGACTTGCACGTGAGAAGCACGTGTGGCATTATTTTGCTAATCACACCCAATTTTCCTCCAAAATTCTAAGCTTTAAAACCTAAAGTTGAAAAGAAAAACCGAAATAAAATCAAGTTTGAAAATTCAAGAGTCAGGAAAATCATTGTCTTTAGCCAACGTAAGCCACACGTGCTGCTCACGTGCAAGTTAATGGCCGGAAAAGCTCAGTCAATGCCGGAAACATTCCTTAGGTCCTTTCTCGCAAAAAAAATTACTTTAAGGTGTGTTTTCACAAAAAAAATTATATAAGGTCCTTTCTCGCAAAATTTGAGTTATAAAAGGTCCTTTTTGGCAAATTTGCCAAAATTAAAAGTTAAAATTTTCGCCCAAAATTTAGACGTGAAAGGCCATTCACACAATCTGGCCTATTTCGCGAAAAGCTCTTTCTCTCCTCTCCAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGGTCCGCCCCTCACCATTCACGAATCACGAGTGCTTAATTTCTTGAGTATGAGTAAATTGGCAGCTCGATCTCTCCTCCTCCATCTCAGACGGTAACTCTCTCTCTCTCTAATCTGCCATTTTCAATATGTAGTTCAATTTATTTGATATCCAACTCAATTTTGCAGAAGACTCATCACTGCTACCACCAATAGTAGCAGCAGCACCACCGAAATTAATATCAAATTTCTCAGTACCAATTCAACTTCCGATGCCTTGAGGACCGAAACCCTAGAATTGGAAGATGTTTCTTCCCAATTTCCTGACGATTTGAAGAGTCAGATCTTCCGCCTTCGTCTCCCTAAACGAAGCGCCACTAATATTATTCAGAAATGGGTCAATGACGGCAATTTTGTTACTCTCCCTCAACTCCGTCAAATTTCTAGAGACCTTCGTAAATCTAACCGTTACAAGCATGCTCTTGAGGTCAGCTCCTCTATCAAATTTCCCTTTTCTTATTATTACTGAATATTTGTGTTTTAAGGGTGAATTGTTAAATGATATATTCGTGGATACTGGTTTTCGGGTATCCCGTGGATGTTTGGAAAAAGTTGTCACCTTTCAAATCTTAATAATGAATTTAGGATAACTAGATTTCTCATGATGGTAGTGAGTAGCAACTATATTTGGATTAATGAGTATCAATTTGCTTGATTACTCTGGTGTAACCTAGAGCTCTAATAATTAGAGTACTGTGTTAAATTCGCCAAACTATTCTATTATGGCATTCTTGTTTCAGATTAAGTGCATTGGAATTGTTTTGTTCCAGTGTTCTTGAAATCTTAATACGAGTACAATAACAAGGCCACAAGGTTGAAAAGTTGAATTCAAAAGAGTCATGATTTTGTTAATGGTAGTCTACGAGGAAAGTCTCAATGTCTCTAGTAAAGAACTAGAGATAAGAAGAAGCAAGCGAAGGTGTATACGTGGCTACCATGTCATTTTGAATGCTCAAAAAAGTTTTAGTCTTGATTTGGAACTCTACCGGGAAATGGCCTACTATGATGCCCATGTGTATTATTTGGAGTATTTGGTTTGTACTGCCATTATCTTGTTAAAACCCGTGATATGTTGGAATTTGTTGTGAGTTTTCCATTTGAATCTTCATGGTGATTCTACTGTGAATGGCACTTTCCTTATTCGAGGGAATATTTTCAAAGTTTCAAGTGAGGAGAAAGTAGTACTTATTTTGTGGAATAGTTTGAAGTGAGGAGGAAGTAAGAGTTGGTCAATATTAGCACAGTAATTAGATCATTCACTCTTATGATGTTAATACTCAAAGCAGCTTATACTACTTAAATGTGGATGTGTTTGCAATAACCTTGCAAACTCAACCTGTAAATCAGAATAACAAGCACAGTAATAGTAGAGGAAAGTGGAAGATTTGATTAACTGAACTCAAGGTATGGAATTTCAACCAAGAAGCTTTAGGCTACCAATCTCCAAGGCTGTAACTTTAGGTTAGAAATCCCTTAAGACTCTAGAAATTACACAATGTCTTCCTCTCTCTTTTCTGTTCTATTTATGTACTAGGTAGTACATTTCATTAATTGCTGCTCTTGTCTTCTAGTGGTGGTAACGGCTCTCCACCTTTGTTGTTGTTGTGCTTTTGTCTGCTCTACTCTGCTACCGTGCTGATGCCTGATATTGTTCCTGCTGGCTGCTGCTAGTGTACACTGTAATGAATCAATTGTAAGGGAAGGGCATAATAGGTAGTTAGTAATATTAGGTAGAAGACAAATTAGATAGGTGTAGTAGACTAGTTATAAATAAGTGCACATTAGGTTATGAGAGGCATGTTGAGAATTTTGGTAAAGCTTAGGCTTTGGAGAGTGGTGACCTCAAGTCACTAAATCCGGAGATTGGTGGCCTCAAGTCACTACTTTTGCATCCCATTTTGTGTTTGTTCATCTATCAATCAGATTAAGTCATATTTTGCCATTAATTTTCTGCTGAAGAATATCAGTTCTTAGACTTAGTATATTAGCGGTACAATTCTGGGTTGATCTGATTTTCTGAGTTTCAAAAAAATAAAAAAAATGGAGTTTAGCAGATCTGATCAGAAGTTCCAGGAAAAGTGGGATGATATATTCAAAAAATGTAAGGAAGATTTCGTGAAAAACATTATGGAAGGCCTATTTCCGATTTTCTCTTCGTTTCGACAAGAATTGAAGGAAATCAAAGAGAATTTTACTGAAATTAAAAAGGAGATTAAGGAAATGAGAGAGGATGAACATTATGTAGATCCGGAGGTGATTGATGTACAAGAGAAAAGGGAAGTGGAGAAAAATGGGGGTGAAGGTTTTCTATCAGATCAATAGAAAGGGGTAGGGGTTTGAATGGTGGAAGATCTGAAAATAATGTAGGCGTTCTCGATTTTTTTGACGGAAAATCTGGTTTTGGTGGTAGTCTTGTTGAGGGTAATCTCAACATCTTCATGTGTGGGGGTGCTGATAAAGAGCCACCGGGAGAAGGGTTTGAACGTGGTGGTGCGGGAGGTGTTGGGTCTGGTGGTGGCCCAGGCTTCACCGAAGGTAGGAGTGGTGGTAGATCCTGGTGTTAATAGAGGAACTTGGAGGTGGCTACTCACGTGGTGATGCTTCAAACAATGGACGTTATATTCATGAAGATCTTGGTGGTGGTTCCGGCGAAGGTCGGGTTGGTGAGATAGTCGAAGGCGAGAAACGCCCTAGTGGAGGCGAGTCGCCCCGAACCGTCATCGAGAATGGTGATGGCGGAAAGGATAGGTCTGCAGGTAGATACTACGATGGTGGCGGCGGTGGTTTTACCAGATTTGTTGTTGATGGTGCGGTGGAGGCTTGTGTAAGCTTCATGGAGAATTCTTCAAGCTGGAGAAAGACTATTACTAAGGGCAGCTTTCCAGCTTGGTAAATTCACAAATGGGTGATATAGCTCATAAAGTCAGGTGGGGAACACATGCTTGGGAGGAATGAAATGTTGTTAAGATCACGTGAAGCCAAGGGAATAAATGAGTTCTCCCAAAAAGTTGGGCTTGAGCATTATGAGCCCAATTTTTCATTTAACAAGGATAATCATTTTGTCTGGAAACTTGGCCTAATTAGCTCTATACCCATATTTTTATTTCCAACTAATAAACTCACTCATTATTCCACAATCCAAACCTCTAATCCAACCATATAGCCCACTCTTTTAAACCCACACTTGACTCCACTTACTCAAGGCTCAAATTCCCAACCAATAATCGGTTCAAACCACTTGCAAAACCAGACCACACTTACTTCATGACTGCTTTTTATGCTGTCCTTGATCGATTCACCTTAGGACCTTGGGCGTCAGGGGAAGCTGGGCGTTAGACTTGATACAAGGCATTCCTACAATGGCCAGAAATTCGATGCTAATTACTATCCACCTTGAGGACAAGGTGAAAGTTTAGGGGTCGATATTGTATGAATCAAGTGTAAGGGAGGGGCATAATAGGTGGTTAGTAATATTAGTTGGAAGACAAATTAGGTAGGTGTAGTAGACTAGTTATAAATAAGTGCACATTAGGTTATGAGAGGCATGTTGAAAATTTTGATTTGGAGAGTGGTGACCTCAAAGTCACTAAATCCGGAGATTGGTGTTTGACTGTTTGTTCATCTATCAATCATCATTCTGCTCAAGAATATCACACCAGAGTAGGTGGGTGAGTGTTGTGGCCCATCACAGTGTTGTTAGGTACTCCCTCCGTTCCTCATTAGTTTTCCTATTTGGAGGAAAACACGGGTATTAAGAAATGGGAATAGTGTGTAAGAAAAACGATGATGGAGAGTGTTTATATGGGGAAGGGATAAAGTAGATGATTGTTTATCGATAAAGTACAAATAAAAGTGGATGTAAAGATGGTTGGGTAAGAAAAAGAAAATTTGTGTAAGAAAAAACAATCATGATTATGGAAAAGCGGGAAAGTGTATTTTCAAAAATAGAAACATGAAAAGTATTGGGTAACACCCGATTAGGATAACAGGAAAACTAATATGGAACAGAGGGAGTACTTAGTTTTCGTTTGTGAACGTTAACAACTTCAACTAATTTTGGAAATTTTAAATGTAACTTTTAAATTCCTTGGCCTTGTCTTCATCGTCATCCAACATGATTATTAGGGTAGAATATAGGACTTCCAGGTAATGTGGTTTAGGCAAAAATCCGTCTCAGGGATAAAGAAATCAGAAACCCATCCCACAATCTCAATCAGATAGTGTCTTTTTACTAAGGAAACGTCTAATAACCTGTTAAAGGATGTAAGTTTTGCACTTATGCTGCCTTGGATTGTGTTGAATTCACAACTGCTGTCATATATTTTTGGTATCAAAACATCTTGTAGCTCTTTTTGTGTCTGTTCAACTCTGTCATTGTTTCGCAGTTTTTTAATGGACCCCCAAGAAGTATTTTCAAGAAAGGGATAGTAATGTTCGATTTTCTAGAACCATTTTGCTGTGAATTTACATAGCTTCAACACCACTAATGGCAGAAAATACGGAAGAAGAAAATGAATTTGATTAATAAATTGGAAAACAGCAAATGTAAATAATATTCAAGCTTTCGAGAGGCTTAAGCTAACTAAAACTCTCTCTGGTCAATTCTCAGCATGATTATCTCTCTCTCCCATATGCTCTATTGTCTATACATGGTAATTTCCTCTTAACAAACTACCTATCTTGTTCTTCAAGTTACTAACAAGTTAACCATGGAGTATAATTCTACTACCTAAAGTTTGCCCTTCCCTTGGATATTGATGCTTAGCGTTGTACAAGTGAAATAGCAAGGATGTTAGTCCTGATTTTGTTGAAAGAATTGACGAATAACTCTAGTTTTGTCAGCTATTTTGAGATAACTTTACTAATGACTTGTGGCAGTTTAAAGTTCTCTCCTTTTTTCTTCTCTTTTTTTTGTTTTTTTTTGTTTTTTTTTGTTTTTTTCCCCCCTTGGCTACTTGACTGATTATGGCAATTGTGATATTGTTTAACGGTCAGTACCTAAATGCTAATGGTTTGATACCTTGCAGATAACAGAGTGGATGGTTTCTCATAATGAATTCAAGTTATCTGATTCTGATTATGCTGCTCACCTTGATTTGTTGACTAAAGTTTTTGGGATTGATGCTGCTGAAAGATATTTTGATGGTCTTCCACAAGATGCTAAAACAAGTGAAACCTACACAGCTCTCCTTCACTCCTATGCATGTGCTAAATTAACTGATAACGCTGAGGAGCTTTTTCAGCAAATCAAGGATTCAGGTCTATCCTTCAGTGCCATTACCTACAATGAGATGATGACTTTGTACATGTCTGTGGGTCAAATGGAGAAAGTTTCTTCAGTAATTGAAGATCTGAAACGCCAAAAGGTGGCACCCGATCTCTTTACTTATAACCTTTGGATAAGTTCTTGTGCTGCAACTCTCAATATTGATGGTGTCAAAAGCATTCTTTCTGAGATGAGCCAGGATCCTCATTCTGATGATGGTTGGGTGAGGTACCGAAACCTTGCTAACATTTATGTTACAACGGGCCAACTTAGCAGTTCTGGGGCTAGCTCCCTTGTAGAAGCTGAAAAGACTGTTACTCAGAGAGAATGGATTACCTATGATTTCCTAATCATACTGCATGCTGGTTTTGGAAACAAGGATATGATAGACCAGATATGGAAATCTTTGAGGATGACTAATCAAAAAATGATTGGTCGAAATTATGTGCCCGTTTTATCTTCATATTTGACGTTGGGACATATCCAAGAGGTTGGAGAAGTTATAGATCAATGGAAGAACTCCACTACTTCAGTTTTTGACAATTCCCTCTGTGACAGATTGGCGAATGCTTTTGTAGAAGCTGGATTTGCAGAAAAAGCTGAAACTTTCCGTTCACTTTTGGATGAGAAAGCTGATACCGTCAGTGAATCGCAGCAGGCATAAAGCAGTTAGGGTTGGTGAAGAAGCATTGTGAGAAGAGTGTCTAGATGAGTCCTGCTACCCGGCCCGGGTGTGGCATTTTTGAAGCCTGCCTGATGACAATTTTGATAAAAGGGTTGATTTATTAAAATCTTGAAACAAATATCAATCAAATGTATTTTGTCACCCATCATGTATACCTCTTTATCTTCTATCTTTCGTAAAAGAAACTGGTGATCTTTTCTAGCTAATAATAAAGATCACCGACTGTTTTTATAAGTACTGGAAGAGTTGTTAAATTTGTATATGCGTGCTTGAAGGTGGTCGAGTATCTTGGTCAAAATGGTTTGATAATCAGCTAATGTAAACTATTTGTGCTTCATACTTAAATGACCATAGTAAAGGTTATAAGTCATATCAAAGGGGAA

mRNA sequence

ATGATGACAAATTTACCTTGTCAAGCTTCCGATTGTAATGATAATGGAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGGTCCGCCCCTCACCATTCACGAATCACGAGTGCTTAATTTCTTGAGTATGAGTAAATTGGCAGCTCGATCTCTCCTCCTCCATCTCAGACGAAGACTCATCACTGCTACCACCAATAGTAGCAGCAGCACCACCGAAATTAATATCAAATTTCTCAGTACCAATTCAACTTCCGATGCCTTGAGGACCGAAACCCTAGAATTGGAAGATGTTTCTTCCCAATTTCCTGACGATTTGAAGAGTCAGATCTTCCGCCTTCGTCTCCCTAAACGAAGCGCCACTAATATTATTCAGAAATGGGTCAATGACGGCAATTTTGTTACTCTCCCTCAACTCCGTCAAATTTCTAGAGACCTTCGTAAATCTAACCGTTACAAGCATGCTCTTGAGATAACAGAGTGGATGGTTTCTCATAATGAATTCAAGTTATCTGATTCTGATTATGCTGCTCACCTTGATTTGTTGACTAAAGTTTTTGGGATTGATGCTGCTGAAAGATATTTTGATGGTCTTCCACAAGATGCTAAAACAAGTGAAACCTACACAGCTCTCCTTCACTCCTATGCATGTGCTAAATTAACTGATAACGCTGAGGAGCTTTTTCAGCAAATCAAGGATTCAGGTCTATCCTTCAGTGCCATTACCTACAATGAGATGATGACTTTGTACATGTCTGTGGGTCAAATGGAGAAAGTTTCTTCAGTAATTGAAGATCTGAAACGCCAAAAGGTGGCACCCGATCTCTTTACTTATAACCTTTGGATAAGTTCTTGTGCTGCAACTCTCAATATTGATGGTGTCAAAAGCATTCTTTCTGAGATGAGCCAGGATCCTCATTCTGATGATGGTTGGGTGAGGTACCGAAACCTTGCTAACATTTATGTTACAACGGGCCAACTTAGCAGTTCTGGGGCTAGCTCCCTTGTAGAAGCTGAAAAGACTGTTACTCAGAGAGAATGGATTACCTATGATTTCCTAATCATACTGCATGCTGGTTTTGGAAACAAGGATATGATAGACCAGATATGGAAATCTTTGAGGATGACTAATCAAAAAATGATTGGTCGAAATTATGTGCCCGTTTTATCTTCATATTTGACGTTGGGACATATCCAAGAGGTTGGAGAAGTTATAGATCAATGGAAGAACTCCACTACTTCAGTTTTTGACAATTCCCTCTGTGACAGATTGGCGAATGCTTTTGTAGAAGCTGGATTTGCAGAAAAAGCTGAAACTTTCCGTTCACTTTTGGATGAGAAAGCTGATACCGTCAGTGAATCGCAGCAGGCATAAAGCAGTTAGGGTTGGTGAAGAAGCATTGTGAGAAGAGTGTCTAGATGAGTCCTGCTACCCGGCCCGGGTGTGGCATTTTTGAAGCCTGCCTGATGACAATTTTGATAAAAGGGTTGATTTATTAAAATCTTGAAACAAATATCAATCAAATGTATTTTGTCACCCATCATGTATACCTCTTTATCTTCTATCTTTCGTAAAAGAAACTGGTGATCTTTTCTAGCTAATAATAAAGATCACCGACTGTTTTTATAAGTACTGGAAGAGTTGTTAAATTTGTATATGCGTGCTTGAAGGTGGTCGAGTATCTTGGTCAAAATGGTTTGATAATCAGCTAATGTAAACTATTTGTGCTTCATACTTAAATGACCATAGTAAAGGTTATAAGTCATATCAAAGGGGAA

Coding sequence (CDS)

ATGATGACAAATTTACCTTGTCAAGCTTCCGATTGTAATGATAATGGAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGCTTACCACAGTGCCGCCCAGCCCTCTGCCCTCACCGGCAGGCCACACCTTGACAGCCCCGGCCGGCCGGCTCACAGGCCACAGCCCACGGGTCCCCACGGCCCCACCGGCACCACGCCGCGCACCCACTACGAGAAACTGAAAGGTCCGCCCCTCACCATTCACGAATCACGAGTGCTTAATTTCTTGAGTATGAGTAAATTGGCAGCTCGATCTCTCCTCCTCCATCTCAGACGAAGACTCATCACTGCTACCACCAATAGTAGCAGCAGCACCACCGAAATTAATATCAAATTTCTCAGTACCAATTCAACTTCCGATGCCTTGAGGACCGAAACCCTAGAATTGGAAGATGTTTCTTCCCAATTTCCTGACGATTTGAAGAGTCAGATCTTCCGCCTTCGTCTCCCTAAACGAAGCGCCACTAATATTATTCAGAAATGGGTCAATGACGGCAATTTTGTTACTCTCCCTCAACTCCGTCAAATTTCTAGAGACCTTCGTAAATCTAACCGTTACAAGCATGCTCTTGAGATAACAGAGTGGATGGTTTCTCATAATGAATTCAAGTTATCTGATTCTGATTATGCTGCTCACCTTGATTTGTTGACTAAAGTTTTTGGGATTGATGCTGCTGAAAGATATTTTGATGGTCTTCCACAAGATGCTAAAACAAGTGAAACCTACACAGCTCTCCTTCACTCCTATGCATGTGCTAAATTAACTGATAACGCTGAGGAGCTTTTTCAGCAAATCAAGGATTCAGGTCTATCCTTCAGTGCCATTACCTACAATGAGATGATGACTTTGTACATGTCTGTGGGTCAAATGGAGAAAGTTTCTTCAGTAATTGAAGATCTGAAACGCCAAAAGGTGGCACCCGATCTCTTTACTTATAACCTTTGGATAAGTTCTTGTGCTGCAACTCTCAATATTGATGGTGTCAAAAGCATTCTTTCTGAGATGAGCCAGGATCCTCATTCTGATGATGGTTGGGTGAGGTACCGAAACCTTGCTAACATTTATGTTACAACGGGCCAACTTAGCAGTTCTGGGGCTAGCTCCCTTGTAGAAGCTGAAAAGACTGTTACTCAGAGAGAATGGATTACCTATGATTTCCTAATCATACTGCATGCTGGTTTTGGAAACAAGGATATGATAGACCAGATATGGAAATCTTTGAGGATGACTAATCAAAAAATGATTGGTCGAAATTATGTGCCCGTTTTATCTTCATATTTGACGTTGGGACATATCCAAGAGGTTGGAGAAGTTATAGATCAATGGAAGAACTCCACTACTTCAGTTTTTGACAATTCCCTCTGTGACAGATTGGCGAATGCTTTTGTAGAAGCTGGATTTGCAGAAAAAGCTGAAACTTTCCGTTCACTTTTGGATGAGAAAGCTGATACCGTCAGTGAATCGCAGCAGGCATAA

Protein sequence

MMTNLPCQASDCNDNGAYHSAAQPSALTGRPHLDSPGRPAHRPQPTGPHGPTGTTPRTHYEKLKAYHSAAQPSALTGRPHLDSPGRPAHRPQPTGPHGPTGTTPRTHYEKLKGPPLTIHESRVLNFLSMSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24278.1	Spo24278.1	mRNA

Homology

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BLAST of Spo24278.1 vs. NCBI nr
Match: gi|902146309|gb|KNA05051.1| (hypothetical protein SOVF_193980 [Spinacia oleracea])

HSP 1 Score: 807.4 bits (2084), Expect = 1.600e-230
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1


		  
Query: 129 MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP 188
           MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP
Sbjct: 1   MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP 60

Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV
Sbjct: 61  DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 120

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
           SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN
Sbjct: 121 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 180

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS
Sbjct: 181 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 240

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 428
           SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT
Sbjct: 241 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 300

Query: 429 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 488
           QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE
Sbjct: 301 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 360

Query: 489 VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA 543
           VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA
Sbjct: 361 VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA 414

[Close]

BLAST of Spo24278.1 vs. NCBI nr
Match: gi|731357423|ref|XP_010690204.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 647.9 bits (1670), Expect = 1.600e-182
Identity = 326/409 (79.71%), Postives = 367/409 (89.73%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +AARSLL HLRR+ I     +++S T+I +K L+ +STSDALR ETLE ED S QFPDDL
Sbjct: 1   MAARSLLFHLRRKSI-----NTNSRTKIELKSLAFSSTSDALRNETLEHEDSSPQFPDDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           KS+IFRLRLPKRSATNIIQKWVN+GN +TLP+LR IS++LRKS+RYKHALEITEWMVS N
Sbjct: 61  KSRIFRLRLPKRSATNIIQKWVNEGNSITLPELRHISKELRKSHRYKHALEITEWMVSDN 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E +LSDSDYA  LDL+TKVFGIDAAERYF+GLP D KTSETYTALLHSYA A L D AEE
Sbjct: 121 ELELSDSDYAVRLDLMTKVFGIDAAERYFEGLPHDVKTSETYTALLHSYASANLIDKAEE 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           LFQ++KDSGLSF AITYNE+MTLYMS+GQ+EKVS VIE+LK QKVAPDLFTYNLW+SSCA
Sbjct: 181 LFQRMKDSGLSFCAITYNELMTLYMSMGQVEKVSLVIEELKNQKVAPDLFTYNLWVSSCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           ATLNI+GV++ILSEMSQDP+SDDGWVRYRNLANIYVTTGQL+SSGASSLVEAEK+VTQRE
Sbjct: 241 ATLNIEGVRNILSEMSQDPNSDDGWVRYRNLANIYVTTGQLTSSGASSLVEAEKSVTQRE 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIILH   GNKDM+DQIWKSLRMT QKMIGRNYVP+LSSYL L H++EVGEVID
Sbjct: 301 WITYDFLIILHTSLGNKDMVDQIWKSLRMTKQKMIGRNYVPILSSYLMLEHMKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQ 541
           QWKNSTTS+FDNS+CDRLA+AFVEAGF E+AE FRSLL EK D V ES+
Sbjct: 361 QWKNSTTSIFDNSVCDRLADAFVEAGFTERAEAFRSLLIEKDDAVDESK 404

[Close]

BLAST of Spo24278.1 vs. NCBI nr
Match: gi|1009151301|ref|XP_015893481.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g09450, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 506.9 bits (1304), Expect = 4.300e-140
Identity = 257/409 (62.84%), Postives = 321/409 (78.48%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A+RS+ L LRR+   ++  S++S +    +F S    S AL ++ LE     S+  +DL
Sbjct: 1   MASRSVFLSLRRKCGESSFLSNNSRSASISRFFS----SGALSSDFLE----DSRENEDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           KS+IFRLRLPKRSATN++QKW+ +GN + + +LRQIS++LRKS RYKHALEI+EWMV+HN
Sbjct: 61  KSRIFRLRLPKRSATNVLQKWIGEGNSIAISELRQISKELRKSQRYKHALEISEWMVAHN 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
             +LSDSDYA  +DL+TKVFGIDAAE YF+GL   AKT+ETYTALLHSYA AKLTD AE+
Sbjct: 121 NSELSDSDYAIRIDLMTKVFGIDAAEHYFEGLXLTAKTTETYTALLHSYAGAKLTDKAEK 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           L+++IKDS L FSA+TYNEMMT+Y+SVGQ+EKVS V+E+LKR+KVAPD+FTYNLWISSCA
Sbjct: 181 LYERIKDSNLGFSALTYNEMMTMYLSVGQVEKVSFVVEELKRKKVAPDIFTYNLWISSCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           A+LNI+ V+ IL+EM  DP +D+ W RY NL++IYV+ G L  +  +SLVE EKT TQRE
Sbjct: 241 ASLNINEVRRILNEMKSDPSADEDWERYINLSSIYVSAGHLVKAELNSLVEVEKTFTQRE 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIILHAG GNKD IDQIWKSLRMT QKM  RNY+ +LSSYL LGH++EVGEVID
Sbjct: 301 WITYDFLIILHAGLGNKDRIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQ 541
           QWK STT+ FD S C RL NAF + G  EK   F +LL +K    S+ +
Sbjct: 361 QWKQSTTTAFDVSACRRLLNAFADVGLTEKVNNFHTLLIQKNSDPSDME 401

[Close]

BLAST of Spo24278.1 vs. NCBI nr
Match: gi|568879312|ref|XP_006492603.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial [Citrus sinensis])

HSP 1 Score: 493.8 bits (1270), Expect = 3.800e-136
Identity = 252/403 (62.53%), Postives = 308/403 (76.43%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTE--INIKFLSTNSTSDALRTETLELEDVSSQFPD 191
           +AARS  L LRR   T   N  +S +E     +FLS+ S+ +    E L+ E  +S   D
Sbjct: 1   MAARSFFLGLRRASNTKIKNRPNSDSESFFRSRFLSSGSSQN----ECLDEETSNSDGKD 60

Query: 192 DLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVS 251
           DLKS+IFR+ LPKRSA N+IQ+WV++GN  T+ +LR I ++LRKS RYKHALEI+EWMV+
Sbjct: 61  DLKSRIFRISLPKRSAINVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 120

Query: 252 HNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNA 311
           H EF LSDSDYA  +DL+TKVFGI + ERYF+GLP  AKTSETYTALLHSYA AK T+ A
Sbjct: 121 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHSYAGAKWTEKA 180

Query: 312 EELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISS 371
           EELF+++K S LSF+A+ YNEMMTLYMSVGQ+EKV+ V+E++KR+ V PD+FTYNLWISS
Sbjct: 181 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 240

Query: 372 CAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQ 431
           CAATLNID VK  L EMS D    D WV+Y NL NIY+T   L ++ +S+LVEAEK++TQ
Sbjct: 241 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 300

Query: 432 REWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEV 491
           R+WITYDFLIIL+AG GNKD IDQIWKSLRMT QKM  RNY+ +LSSYL LGH++EVGE+
Sbjct: 301 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 360

Query: 492 IDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           IDQWK S TS FD S C+RL  AF + G  EKA  F  LL +K
Sbjct: 361 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399

[Close]

BLAST of Spo24278.1 vs. NCBI nr
Match: gi|734390479|gb|KHN26767.1| (Pentatricopeptide repeat-containing protein, mitochondrial [Glycine soja])

HSP 1 Score: 492.3 bits (1266), Expect = 1.100e-135
Identity = 252/401 (62.84%), Postives = 307/401 (76.56%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A RSL L LRR       NS  +      +F+S+ + S  L  E++E  D      DDL
Sbjct: 1   MAHRSLFLSLRR-------NSGLACLLNRTRFVSSGAVSSDLVEESVEGVD------DDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           +S+IFRLRLPKRSATN++QKWV  GN +TL QLR IS++LR+S RYKHALEI+EWMVSH 
Sbjct: 61  RSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSHE 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E++LSDSDYAA +DL TKVFGIDAAERYF+GLP   KT+ETYTALLHSYA AKLT  AEE
Sbjct: 121 EYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEE 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           L+Q+IKDS LSF A+TYNEMMTLYMSVGQ EKV SV+E+LK+QKV+PD+FTYNLWISSCA
Sbjct: 181 LYQRIKDSNLSFDAVTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISSCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           A LNID V+ IL EMS    S++ W+RY NLANIY++ G L ++ +++LVE EK +TQR+
Sbjct: 241 AILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQ 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIIL+ G G+KD +DQIW SLRMT QKMI RNY+ ++SSYL LGH +EVGEVID
Sbjct: 301 WITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           QWK STT+ FD   C ++  AF + G AE A     +L EK
Sbjct: 361 QWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388

[Close]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QET1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193980 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 1.100e-230
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1


		  
Query: 129 MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP 188
           MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP
Sbjct: 1   MSKLAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFP 60

Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV
Sbjct: 61  DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 120

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
           SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN
Sbjct: 121 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 180

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS
Sbjct: 181 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 240

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 428
           SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT
Sbjct: 241 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 300

Query: 429 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 488
           QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE
Sbjct: 301 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 360

Query: 489 VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA 543
           VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA
Sbjct: 361 VIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQQA 414

[Close]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMD8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g212220 PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 1.100e-182
Identity = 326/409 (79.71%), Postives = 367/409 (89.73%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +AARSLL HLRR+ I     +++S T+I +K L+ +STSDALR ETLE ED S QFPDDL
Sbjct: 1   MAARSLLFHLRRKSI-----NTNSRTKIELKSLAFSSTSDALRNETLEHEDSSPQFPDDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           KS+IFRLRLPKRSATNIIQKWVN+GN +TLP+LR IS++LRKS+RYKHALEITEWMVS N
Sbjct: 61  KSRIFRLRLPKRSATNIIQKWVNEGNSITLPELRHISKELRKSHRYKHALEITEWMVSDN 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E +LSDSDYA  LDL+TKVFGIDAAERYF+GLP D KTSETYTALLHSYA A L D AEE
Sbjct: 121 ELELSDSDYAVRLDLMTKVFGIDAAERYFEGLPHDVKTSETYTALLHSYASANLIDKAEE 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           LFQ++KDSGLSF AITYNE+MTLYMS+GQ+EKVS VIE+LK QKVAPDLFTYNLW+SSCA
Sbjct: 181 LFQRMKDSGLSFCAITYNELMTLYMSMGQVEKVSLVIEELKNQKVAPDLFTYNLWVSSCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           ATLNI+GV++ILSEMSQDP+SDDGWVRYRNLANIYVTTGQL+SSGASSLVEAEK+VTQRE
Sbjct: 241 ATLNIEGVRNILSEMSQDPNSDDGWVRYRNLANIYVTTGQLTSSGASSLVEAEKSVTQRE 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIILH   GNKDM+DQIWKSLRMT QKMIGRNYVP+LSSYL L H++EVGEVID
Sbjct: 301 WITYDFLIILHTSLGNKDMVDQIWKSLRMTKQKMIGRNYVPILSSYLMLEHMKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEKADTVSESQ 541
           QWKNSTTS+FDNS+CDRLA+AFVEAGF E+AE FRSLL EK D V ES+
Sbjct: 361 QWKNSTTSIFDNSVCDRLADAFVEAGFTERAEAFRSLLIEKDDAVDESK 404

[Close]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Match: A0A0B2R4M3_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_011359 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 7.700e-136
Identity = 252/401 (62.84%), Postives = 307/401 (76.56%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A RSL L LRR       NS  +      +F+S+ + S  L  E++E  D      DDL
Sbjct: 1   MAHRSLFLSLRR-------NSGLACLLNRTRFVSSGAVSSDLVEESVEGVD------DDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           +S+IFRLRLPKRSATN++QKWV  GN +TL QLR IS++LR+S RYKHALEI+EWMVSH 
Sbjct: 61  RSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSHE 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E++LSDSDYAA +DL TKVFGIDAAERYF+GLP   KT+ETYTALLHSYA AKLT  AEE
Sbjct: 121 EYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEE 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           L+Q+IKDS LSF A+TYNEMMTLYMSVGQ EKV SV+E+LK+QKV+PD+FTYNLWISSCA
Sbjct: 181 LYQRIKDSNLSFDAVTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISSCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           A LNID V+ IL EMS    S++ W+RY NLANIY++ G L ++ +++LVE EK +TQR+
Sbjct: 241 AILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQ 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIIL+ G G+KD +DQIW SLRMT QKMI RNY+ ++SSYL LGH +EVGEVID
Sbjct: 301 WITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           QWK STT+ FD   C ++  AF + G AE A     +L EK
Sbjct: 361 QWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388

[Close]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Match: A0A067DHG1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015370mg PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.000e-135
Identity = 252/403 (62.53%), Postives = 307/403 (76.18%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINI--KFLSTNSTSDALRTETLELEDVSSQFPD 191
           +AARS  L LRR   T   N  +S  E     +FLS+ S+ +    E L+ E  +S   D
Sbjct: 1   MAARSFFLGLRRASNTKIKNRPNSDYECFFYSRFLSSGSSQN----ECLDEETSNSDGKD 60

Query: 192 DLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVS 251
           DLKS+IFR+ LPKRSATN+IQ+WV++GN  T+ +LR I ++LRKS RYKHALEI+EWMV+
Sbjct: 61  DLKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVT 120

Query: 252 HNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNA 311
           H EF LSDSDYA  +DL+TKVFGI + ERYF+GLP  AKTSETYTALLH YA AK T+ A
Sbjct: 121 HKEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKA 180

Query: 312 EELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISS 371
           EELF+++K S LSF+A+ YNEMMTLYMSVGQ+EKV+ V+E++KR+ V PD+FTYNLWISS
Sbjct: 181 EELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISS 240

Query: 372 CAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQ 431
           CAATLNID VK  L EMS D    D WV+Y NL NIY+T   L ++ +S+LVEAEK++TQ
Sbjct: 241 CAATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQ 300

Query: 432 REWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEV 491
           R+WITYDFLIIL+AG GNKD IDQIWKSLRMT QKM  RNY+ +LSSYL LGH++EVGE+
Sbjct: 301 RQWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEI 360

Query: 492 IDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           IDQWK S TS FD S C+RL  AF + G  EKA  F  LL +K
Sbjct: 361 IDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQK 399

[Close]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Match: I1KUA9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G176700 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.200e-134
Identity = 251/401 (62.59%), Postives = 305/401 (76.06%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A  SL L LRR       NS  +      +F+S+ + S  L  E++E  D      DDL
Sbjct: 1   MAHCSLFLSLRR-------NSGLACLLNRTRFVSSGAVSSDLVEESVEGVD------DDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           +S+IFRLRLPKRSATN++QKWV  GN VTL QLR IS++LR+S RYKHALEI+EWMVSH 
Sbjct: 61  RSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHE 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E++LSDSDYAA +DL TKVFGIDAAERYF+GLP   KT+ETYTALLHSYA AKLT  AEE
Sbjct: 121 EYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEE 180

Query: 312 LFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSCA 371
           L+Q+IKDS LSF A+TYNEMMTLYMSVGQ EKV SV+E+LK+QKV+PD+FTYNLWIS CA
Sbjct: 181 LYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCA 240

Query: 372 ATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQRE 431
           A LNID V+ IL EMS    S++ W+RY NLANIY++ G L ++ +++LVE EK +TQR+
Sbjct: 241 AILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQ 300

Query: 432 WITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVID 491
           WITYDFLIIL+ G G+KD +DQIW SLRMT QKMI RNY+ ++SSYL LGH +EVGEVID
Sbjct: 301 WITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVID 360

Query: 492 QWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           QWK STT+ FD   C ++  AF + G AE A     +L EK
Sbjct: 361 QWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388

[Close]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 7.000e-122
Identity = 224/399 (56.14%), Postives = 297/399 (74.44%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A RSL   LR RL       S+          S +  +DA    +L  E   S+  DDL
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKSYNADAAIGNSLVEE---SEEKDDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           KS+IFRLRLPKRSAT +++KW+ +GN +T+ +LR+IS++LR++ RYKHALE+TEWMV H 
Sbjct: 61  KSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHE 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E K+SD+DYA+ +DL++KVFGIDAAERYF+GL  D+KT+ETYT+LLH+YA +K T+ AE 
Sbjct: 121 ESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEA 180

Query: 312 LFQQIKDS-GLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSC 371
           LF++I +S  L+F AITYNEMMTLYMSVGQ+EKV  VIE LK++KV+PD+FTYNLW+SSC
Sbjct: 181 LFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSC 240

Query: 372 AATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQR 431
           AAT NID ++ IL EM  D  S++GWVRY +L +IY+ + +++++ ++  VEAEK+++QR
Sbjct: 241 AATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQR 300

Query: 432 EWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVI 491
           EWITYDFL+ILH G GNK MIDQIWKSLR TNQ +  R+Y+ VLSSYL LGH++E  E+I
Sbjct: 301 EWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEII 360

Query: 492 DQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLL 530
            QWK S T+ FD S C R+ NAF + G    A  F  +L
Sbjct: 361 HQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLIL 396

[Close]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.100e-58
Identity = 114/307 (37.13%), Postives = 190/307 (61.89%), Query Frame = 1


		  
Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           D L  ++  L   KRSA   I+KW  +G+ V   +L +I R+LRK  RYKHALEI EWMV
Sbjct: 61  DTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 120

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
              + KL   DYA HLDL++K+ G+++AE++F+ +P   +     T+LLHSY   KL+D 
Sbjct: 121 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 180

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AE LF+++ + G   S + YN M+++Y+S GQ EKV  +I++LK  + +PD+ TYNLW++
Sbjct: 181 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 240

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 428
           + A+  +++G + +  +  ++  + D WV Y  L N+Y  T  +  +   +L E EK V+
Sbjct: 241 AFASGNDVEGAEKVYLKAKEEKLNPD-WVTYSVLTNLYAKTDNVEKA-RLALKEMEKLVS 300

Query: 429 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 488
           ++  + Y  LI LHA  G+KD ++  WK ++ + +KM    Y+ ++S+ + LG  ++   
Sbjct: 301 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 360

Query: 489 VIDQWKN 496
           + D+W++
Sbjct: 361 LYDEWES 364

[Close]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.500e-47
Identity = 114/375 (30.40%), Postives = 193/375 (51.47%), Query Frame = 1


		  
Query: 165 STNSTSDALRTETLELEDVSSQFPDDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQL 224
           +T      L +   +  D SS    +   +I R   P+RS T+++Q+ ++ G+ V+L +L
Sbjct: 14  NTTGVVSRLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSEL 73

Query: 225 RQISRDLRKSNRYKHALEITEWMVSHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLP 284
           R IS+ L +SNRY  AL++ EWM +  + + S  D A  LDL+ K  G+   E YF+ L 
Sbjct: 74  RLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLL 133

Query: 285 QDAKT----SETYTALLHSYACAKLTDNAEELFQQIKDSGLSFSAITYNEMMTLYMSVGQ 344
             + +       Y  LL +Y   K+   AE L +++   G   +   +NEMM LY + GQ
Sbjct: 134 HSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQ 193

Query: 345 MEKVSSVIEDLKRQKVAPDLFTYNLWISSCAATLNIDGVKSILSEMSQDPHSDDGWVRYR 404
            EKV  V+  +K  K+  ++ +YNLW+++C     +  V+++  EM  D   + GW    
Sbjct: 194 YEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLC 253

Query: 405 NLANIYVTTGQLSSSGASSLVEAEKTVTQREWITYDFLIILHAGFGNKDMIDQIWKSLRM 464
            LAN+Y+ +G         L +AEK + +   + Y FLI L+A  GNK+ + ++W+  + 
Sbjct: 254 TLANVYIKSG-FDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKS 313

Query: 465 TNQKMIGRNYVPVLSSYLTLGHIQEVGEVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAE 524
              ++   NY+ VLSS +  G ++E   V  +W+    + +D  + + L  A+V  G   
Sbjct: 314 VCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFN-YDVRVSNVLLGAYVRNGEIR 373

Query: 525 KAETFRSLLDEKADT 536
           KAE+    + E+  T
Sbjct: 374 KAESLHGCVLERGGT 386

[Close]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.600e-46
Identity = 101/345 (29.28%), Postives = 185/345 (53.62%), Query Frame = 1


		  
Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           D L+ ++ R   P  S   ++  W++ GN V   +L  I + LRK +R+ HAL+I++WM 
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
            H   ++S+ D A  LDL+ KV G+  AE++F+ +P + +    Y ALL+ YA  K+   
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AE++FQ++K+ G     + YN M+ LY+  G+   V  ++ +++ + V PD+FT N  + 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTV- 428
           + +   +++G++  L     D      W  Y + AN Y+  G L+      L ++E+ V 
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQMVN 277

Query: 429 TQREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVG 488
            Q+    Y+ L+  +   G K+ + ++W SL           Y+ V+S+ L +  I+EV 
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVE 337

Query: 489 EVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           +++++W+ +  S+FD  +   L   + + G  EKAE   ++L +K
Sbjct: 338 KIMEEWE-AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.800e-46
Identity = 104/298 (34.90%), Postives = 166/298 (55.70%), Query Frame = 1


		  
Query: 229 RDLRKSNRYKHALEITEWMVSHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAK 288
           + LR    Y  AL+++E M      K + SD A HLDL+ K   I A E YF  LP+ +K
Sbjct: 63  KKLRNRGLYYPALKLSEVMEERGMNK-TVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 289 TSETYTALLHSYACAKLTDNAEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVI 348
           T  TY +LL+ Y    LT+ AE L  ++K+  ++ S+++YN +MTLY   G+ EKV ++I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 349 EDLKRQKVAPDLFTYNLWISSCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVT 408
           ++LK + V PD +TYN+W+ + AAT +I GV+ ++ EM++D      W  Y N+A+IYV 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 409 TGQLSSSGASSLVEAEKTVTQREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGR 468
            G LS     +L E E   TQR++  Y FLI L+   G    + +IW+SLR+   K    
Sbjct: 243 AG-LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 302

Query: 469 NYVPVLSSYLTLGHIQEVGEVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFR 527
            Y+ ++   + L  +     +  +W+ +  S +D  + + L  A+ + G  +KA   +
Sbjct: 303 AYLNMIQVLVKLNDLPGAETLFKEWQ-ANCSTYDIRIVNVLIGAYAQEGLIQKANELK 357

[Close]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 439.1 bits (1128), Expect = 3.900e-123
Identity = 224/399 (56.14%), Postives = 297/399 (74.44%), Query Frame = 1


		  
Query: 132 LAARSLLLHLRRRLITATTNSSSSTTEINIKFLSTNSTSDALRTETLELEDVSSQFPDDL 191
           +A RSL   LR RL       S+          S +  +DA    +L  E   S+  DDL
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKSYNADAAIGNSLVEE---SEEKDDL 60

Query: 192 KSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMVSHN 251
           KS+IFRLRLPKRSAT +++KW+ +GN +T+ +LR+IS++LR++ RYKHALE+TEWMV H 
Sbjct: 61  KSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHE 120

Query: 252 EFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDNAEE 311
           E K+SD+DYA+ +DL++KVFGIDAAERYF+GL  D+KT+ETYT+LLH+YA +K T+ AE 
Sbjct: 121 ESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEA 180

Query: 312 LFQQIKDS-GLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWISSC 371
           LF++I +S  L+F AITYNEMMTLYMSVGQ+EKV  VIE LK++KV+PD+FTYNLW+SSC
Sbjct: 181 LFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSC 240

Query: 372 AATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVTQR 431
           AAT NID ++ IL EM  D  S++GWVRY +L +IY+ + +++++ ++  VEAEK+++QR
Sbjct: 241 AATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQR 300

Query: 432 EWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGEVI 491
           EWITYDFL+ILH G GNK MIDQIWKSLR TNQ +  R+Y+ VLSSYL LGH++E  E+I
Sbjct: 301 EWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEII 360

Query: 492 DQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLL 530
            QWK S T+ FD S C R+ NAF + G    A  F  +L
Sbjct: 361 HQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLIL 396

[Close]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 6.200e-60
Identity = 114/307 (37.13%), Postives = 190/307 (61.89%), Query Frame = 1


		  
Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           D L  ++  L   KRSA   I+KW  +G+ V   +L +I R+LRK  RYKHALEI EWMV
Sbjct: 61  DTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 120

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
              + KL   DYA HLDL++K+ G+++AE++F+ +P   +     T+LLHSY   KL+D 
Sbjct: 121 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 180

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AE LF+++ + G   S + YN M+++Y+S GQ EKV  +I++LK  + +PD+ TYNLW++
Sbjct: 181 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 240

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTVT 428
           + A+  +++G + +  +  ++  + D WV Y  L N+Y  T  +  +   +L E EK V+
Sbjct: 241 AFASGNDVEGAEKVYLKAKEEKLNPD-WVTYSVLTNLYAKTDNVEKA-RLALKEMEKLVS 300

Query: 429 QREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVGE 488
           ++  + Y  LI LHA  G+KD ++  WK ++ + +KM    Y+ ++S+ + LG  ++   
Sbjct: 301 KKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKG 360

Query: 489 VIDQWKN 496
           + D+W++
Sbjct: 361 LYDEWES 364

[Close]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 8.300e-49
Identity = 114/375 (30.40%), Postives = 193/375 (51.47%), Query Frame = 1


		  
Query: 165 STNSTSDALRTETLELEDVSSQFPDDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQL 224
           +T      L +   +  D SS    +   +I R   P+RS T+++Q+ ++ G+ V+L +L
Sbjct: 14  NTTGVVSRLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSEL 73

Query: 225 RQISRDLRKSNRYKHALEITEWMVSHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLP 284
           R IS+ L +SNRY  AL++ EWM +  + + S  D A  LDL+ K  G+   E YF+ L 
Sbjct: 74  RLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLL 133

Query: 285 QDAKT----SETYTALLHSYACAKLTDNAEELFQQIKDSGLSFSAITYNEMMTLYMSVGQ 344
             + +       Y  LL +Y   K+   AE L +++   G   +   +NEMM LY + GQ
Sbjct: 134 HSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQ 193

Query: 345 MEKVSSVIEDLKRQKVAPDLFTYNLWISSCAATLNIDGVKSILSEMSQDPHSDDGWVRYR 404
            EKV  V+  +K  K+  ++ +YNLW+++C     +  V+++  EM  D   + GW    
Sbjct: 194 YEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLC 253

Query: 405 NLANIYVTTGQLSSSGASSLVEAEKTVTQREWITYDFLIILHAGFGNKDMIDQIWKSLRM 464
            LAN+Y+ +G         L +AEK + +   + Y FLI L+A  GNK+ + ++W+  + 
Sbjct: 254 TLANVYIKSG-FDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKS 313

Query: 465 TNQKMIGRNYVPVLSSYLTLGHIQEVGEVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAE 524
              ++   NY+ VLSS +  G ++E   V  +W+    + +D  + + L  A+V  G   
Sbjct: 314 VCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFN-YDVRVSNVLLGAYVRNGEIR 373

Query: 525 KAETFRSLLDEKADT 536
           KAE+    + E+  T
Sbjct: 374 KAESLHGCVLERGGT 386

[Close]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 188.7 bits (478), Expect = 9.200e-48
Identity = 101/345 (29.28%), Postives = 185/345 (53.62%), Query Frame = 1


		  
Query: 189 DDLKSQIFRLRLPKRSATNIIQKWVNDGNFVTLPQLRQISRDLRKSNRYKHALEITEWMV 248
           D L+ ++ R   P  S   ++  W++ GN V   +L  I + LRK +R+ HAL+I++WM 
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 249 SHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAKTSETYTALLHSYACAKLTDN 308
            H   ++S+ D A  LDL+ KV G+  AE++F+ +P + +    Y ALL+ YA  K+   
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 309 AEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVIEDLKRQKVAPDLFTYNLWIS 368
           AE++FQ++K+ G     + YN M+ LY+  G+   V  ++ +++ + V PD+FT N  + 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 369 SCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVTTGQLSSSGASSLVEAEKTV- 428
           + +   +++G++  L     D      W  Y + AN Y+  G L+      L ++E+ V 
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG-LTEKALEMLRKSEQMVN 277

Query: 429 TQREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGRNYVPVLSSYLTLGHIQEVG 488
            Q+    Y+ L+  +   G K+ + ++W SL           Y+ V+S+ L +  I+EV 
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVE 337

Query: 489 EVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFRSLLDEK 533
           +++++W+ +  S+FD  +   L   + + G  EKAE   ++L +K
Sbjct: 338 KIMEEWE-AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 2.700e-47
Identity = 104/298 (34.90%), Postives = 166/298 (55.70%), Query Frame = 1


		  
Query: 229 RDLRKSNRYKHALEITEWMVSHNEFKLSDSDYAAHLDLLTKVFGIDAAERYFDGLPQDAK 288
           + LR    Y  AL+++E M      K + SD A HLDL+ K   I A E YF  LP+ +K
Sbjct: 63  KKLRNRGLYYPALKLSEVMEERGMNK-TVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 289 TSETYTALLHSYACAKLTDNAEELFQQIKDSGLSFSAITYNEMMTLYMSVGQMEKVSSVI 348
           T  TY +LL+ Y    LT+ AE L  ++K+  ++ S+++YN +MTLY   G+ EKV ++I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 349 EDLKRQKVAPDLFTYNLWISSCAATLNIDGVKSILSEMSQDPHSDDGWVRYRNLANIYVT 408
           ++LK + V PD +TYN+W+ + AAT +I GV+ ++ EM++D      W  Y N+A+IYV 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 409 TGQLSSSGASSLVEAEKTVTQREWITYDFLIILHAGFGNKDMIDQIWKSLRMTNQKMIGR 468
            G LS     +L E E   TQR++  Y FLI L+   G    + +IW+SLR+   K    
Sbjct: 243 AG-LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 302

Query: 469 NYVPVLSSYLTLGHIQEVGEVIDQWKNSTTSVFDNSLCDRLANAFVEAGFAEKAETFR 527
            Y+ ++   + L  +     +  +W+ +  S +D  + + L  A+ + G  +KA   +
Sbjct: 303 AYLNMIQVLVKLNDLPGAETLFKEWQ-ANCSTYDIRIVNVLIGAYAQEGLIQKANELK 357

The following BLAST results are available for this feature:

BLAST of Spo24278.1 vs. NCBI nr
BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
BLAST of Spo24278.1 vs. TAIR (Arabidopsis)

BLAST of Spo24278.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902146309\|gb\|KNA05051.1\|	1.6e-230	100.	hypothetical protein SOVF_1939...	[more]
gi\|731357423\|ref\|XP_010690204.1\|	1.6e-182	79.7	PREDICTED: pentatricopeptide r...	[more]
gi\|1009151301\|ref\|XP_015893481.1\|	4.3e-140	62.8	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|568879312\|ref\|XP_006492603.1\|	3.8e-136	62.5	PREDICTED: pentatricopeptide r...	[more]
gi\|734390479\|gb\|KHN26767.1\|	1.1e-135	62.8	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo24278.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QET1_SPIOL	1.1e-230	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMD8_BETVU	1.1e-182	79.7	Uncharacterized protein OS=Bet...	[more]
A0A0B2R4M3_GLYSO	7.7e-136	62.8	Pentatricopeptide repeat-conta...	[more]
A0A067DHG1_CITSI	1.0e-135	62.5	Uncharacterized protein OS=Cit...	[more]
I1KUA9_SOYBN	3.2e-134	62.5	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo24278.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PP372_ARATH	7.0e-122	56.1	Pentatricopeptide repeat-conta...	[more]
PP302_ARATH	1.1e-58	37.1	Pentatricopeptide repeat-conta...	[more]
PP400_ARATH	1.5e-47	30.4	Pentatricopeptide repeat-conta...	[more]
PP166_ARATH	1.6e-46	29.2	Pentatricopeptide repeat-conta...	[more]
PPR86_ARATH	4.8e-46	34.9	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo24278.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G09450.1	3.9e-123	56.1	Tetratricopeptide repeat (TPR)...	[more]
AT4G02820.1	6.2e-60	37.1	Pentatricopeptide repeat (PPR)...	[more]
AT5G27460.1	8.3e-49	30.4	Tetratricopeptide repeat (TPR)...	[more]
AT2G20710.1	9.2e-48	29.2	Tetratricopeptide repeat (TPR)...	[more]
AT1G60770.1	2.7e-47	34.9	Tetratricopeptide repeat (TPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 312..370 score: 2.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 292..322 score: 5.4E-5coord: 326..359 score: 5.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 289..323 score: 9.701coord: 359..389 score: 7.037coord: 324..358 score: 9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 123..529 score: 6.4E
None	No IPR available	PANTHER	PTHR24015:SF155	SUBFAMILY NOT NAMED	coord: 123..529 score: 6.4E

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24399	0.66	Barchart \| Table