Spo26639 (gene)

Overview
NameSpo26639
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCytochrome b-c1 complex subunit Rieske, mitochondrial (1.10.2.2)
LocationSpoScf_00758 : 106699 .. 109820 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACATTTTAATCTTTGACCTCCTCCCAACTTTTTCGCGAGTAAAGCAGTGTTCTATTTTAGTTTCGATCTCCTCCTCTCTCTTCCTCTTTCGTACGCACCTCGTCCACCACCCAACCTCTCGTTCTCTCTCCTCAAACCCCCACCGTCAAAGGCGGAAATCCCAATCCCATCCACCAGCTACGAAGATGTTGAGGGTGGCGGCAAGGCGGCTCTCTTCTCTCTCCTCCTCTTCATGGCGTCCCGCCGCCTCCTCCACCGTTGTCTCCAAGGCTCCTCTCTCCCGTGACGACGAGGAGTGCAGATCCACCCCTTTATTCGTACCTCATTTGTACTCTCACTATCGAGGTTAGGGTTTCCATCCAAGACGTAGAGTAATTTGAGATTTTTTCATTTGGTTGATTTTTTATGTTTAATCTAAAGTTAGGGTTTCGTTTGGATTTCGATTTCTATAATTGTGTTTGTCTCGCTGATTTGAAAAAGATCTCGAAAAGTTGCGATTTTTGGTTGTGCTTTGAATTCATATTTTTTCGGCCCTTGTTGTTTGATTATTGTATTTTTGTTGGCGATTCAATGAAAACACGTTTATGCGTTTATGCTATGTATAGTGGGTGAGTCGTGAAGTTGTTTAGAATTCTAATTTAGGCTAGGGTTTTGGAGAGGTTAAATCATTTGCGTTTGTGCTTTTGCAAAATGAATGGAGGCTGTACCGGAGTTTTAAGTATTGGTGATTGGGTGTCTTAAAAAAATGGTGAAATGGAGACGATTTACTCCGATTTGTATGGTTCAATAGTGTTATTGCAGTATTTTGTATTCGCATACAAGGGCAAGATTAACTCGAATTTGTAACTTGCTGTGCTTTATTGTTTGCAGAATTAGTGTTGCCATACAATCCTCTGATTGTTGATATGTGATTGGGCTTGAAAGCCATGGTGGCATAAGTATCATGAGTAGTATACAGGATAAGTTTGTTGGCAAAATTTGGCAATTTTATTTTTTCAAAGTGGAGAGTTATGTACGTAATAGAAGTTAATTAATTTGTCCTCCTTCCTTATTTTGCAGTTTTCATTATCTAATCTATGCTTGAATTTTTTTCATAGGGAATCCGTTTTTACTATAACATACTTGAGCATGCGCTTTTTTTAGCTAAACTAATTCTATCAGCTTAGGCTGTGTGAGCTGCTTTCAATCTTGCTAAACTTGTAGTTTCCGTATGTCTCAAATTTGTTATCTGCAACGAGGGGTTAAGAATGAAAAGGTATCTTGTTAGAAAATATTGAGAGATTCCAATATTGTGTAAAAAAATATTTTTCCCAACAAGTAACAAAGACTCAAATCAAAGAGATTCCAAAATATGCTTTTTCCAAAATCTTGGAGAGCTTTATGTTTTTGCAGAAGCTCTTCATCTTAGTTACTCAAGTACAGAAAAACTCGGGTGATCGTATCCTGTTGAACTACTACCTTTGTTTTTCTATTTCTATTTCTTGTCTCCTTTCATGTCTCTATTGAGTATTGACTTTATTCATTGAGAATAAGATGGGTAGTCATGCCACCAATCTGAGGTAACAACAGTGACTATACCTGAGTATAATTGCACGTAGATAGTCTGTGTGAAAGCTTGAATTGTGCTGTAATACTATCAGTCAATGACATTCCATTGCAATAGAAGACAATAGGACGAGTGAGGTTATTTCAGAAAGTAATACGAAAGTTAGGTTCCGTTGTACTTGATTAGCTAGATATCCATAGGAAGAGTGATTTTTCTTTCATGTTGCTGTTGGCTTCTTTGTCAGACCACTTGGATCTTTGTGCAAGAGTACAAGTGTATTATCCTTAGTGAATACAGATGTGTTTCATCATTGTGTTATTTCTTTGATGCCCGATGAATGATATCCTTTATCCATATAGCTGGTCTTTTTCATTGGGGAGTTGTCTATATTAAACTAATACCTATATGTAATGTAGGTATCTGTTTTAGCAATTGTCTTTGTGAATGATACATAGAGTTCCCCTGTGATCTTGAATAAAGCGCATCCATCATATCTTATCTGGTTTTGTATTTGCTAATGTTGAAACATTAATCTTTTAATATTTGATTGTTGATTGCAGGATTTGCTAGTGAGCACCTGATCCCAAAAGCTGAACATGGCATAATCCTTGATGTTCCAGCTACTGTGCATGCAATTAAGAATCCCTCGTCAAAAATAACGTATGATGAGTACAACCATGAACGATATCCGCCTGGTGATCCCAGCAAGAGAGCATTTGCTTACTTTGTTCTCACTGGTGGAAGATTTGTGTATGCTTCCCTTATTCGACTGCTTGTCCTCAAGTTTGTGCTGAGTATGTCTGCTAGTAAGGATGTCCTTGCGCTGGCATCACTTGAGGTTGATCTCTCAAGCATTGAGCCAGGGACTACTGTGACAGTGAAGTGGCGTGGAAAGCCAGTCTTCATCAGGCGCCGAACAGAGGATGACATCAAGCTGGCTAACAGTGTTGATCTTGGATCCCTGCGTGACCCACAGAAGGATGAAGAAAGAGTTAAGAACCCTGAGTGGCTTATTGTCATTGGTGTCTGCACTCATTTGGGTTGCATTCCTTTGCCAAATGCTGGAGACTATGGTGGATGGTTTTGTCCTTGCCATGGTTCTCATTATGACATCTCTGGTAGAATTCGCAAGGGTCCTGCACCATATAATCTTGAGGTACCCACTTACTCTTTCCTGGAAGACAACAAGTTGCTAGTTGGTTGAAGAACCAACGAGATGATGGAAAGCCACTTTAAGCCAGGGATGATGGCGATATCTAGAATTCTTTCTTTTTTGGTTTTCCTTTAGTGAACTTGGATATCAGAAATTTTCTGAGACATTCGCATATAAATTTATTTTGCTTTGACCATGTCAAAAACATACTTGTGTAATTTTATCTGGTGAAGTTGGTGTTAAGAAATAATCTGCTGGGCGTTTTGCTTAGTATAAATTTTTGGTGATGGTTTTCAACAATACATTCAACTCGTGGCATTATTTTGATAGTAATGATACTTTGAATTTTGATGAATGTGGCTCTGTAGATATTTAGAAGTATTTACAGTACATCTCAACAATGACTGTATTTGCCGCACAA

mRNA sequence

ACACATTTTAATCTTTGACCTCCTCCCAACTTTTTCGCGAGTAAAGCAGTGTTCTATTTTAGTTTCGATCTCCTCCTCTCTCTTCCTCTTTCGTACGCACCTCGTCCACCACCCAACCTCTCGTTCTCTCTCCTCAAACCCCCACCGTCAAAGGCGGAAATCCCAATCCCATCCACCAGCTACGAAGATGTTGAGGGTGGCGGCAAGGCGGCTCTCTTCTCTCTCCTCCTCTTCATGGCGTCCCGCCGCCTCCTCCACCGTTGTCTCCAAGGCTCCTCTCTCCCGTGACGACGAGGAGTGCAGATCCACCCCTTTATTCGTACCTCATTTGTACTCTCACTATCGAGGATTTGCTAGTGAGCACCTGATCCCAAAAGCTGAACATGGCATAATCCTTGATGTTCCAGCTACTGTGCATGCAATTAAGAATCCCTCGTCAAAAATAACGTATGATGAGTACAACCATGAACGATATCCGCCTGGTGATCCCAGCAAGAGAGCATTTGCTTACTTTGTTCTCACTGGTGGAAGATTTGTGTATGCTTCCCTTATTCGACTGCTTGTCCTCAAGTTTGTGCTGAGTATGTCTGCTAGTAAGGATGTCCTTGCGCTGGCATCACTTGAGGTTGATCTCTCAAGCATTGAGCCAGGGACTACTGTGACAGTGAAGTGGCGTGGAAAGCCAGTCTTCATCAGGCGCCGAACAGAGGATGACATCAAGCTGGCTAACAGTGTTGATCTTGGATCCCTGCGTGACCCACAGAAGGATGAAGAAAGAGTTAAGAACCCTGAGTGGCTTATTGTCATTGGTGTCTGCACTCATTTGGGTTGCATTCCTTTGCCAAATGCTGGAGACTATGGTGGATGGTTTTGTCCTTGCCATGGTTCTCATTATGACATCTCTGGTAGAATTCGCAAGGGTCCTGCACCATATAATCTTGAGGTACCCACTTACTCTTTCCTGGAAGACAACAAGTTGCTAGTTGGTTGAAGAACCAACGAGATGATGGAAAGCCACTTTAAGCCAGGGATGATGGCGATATCTAGAATTCTTTCTTTTTTGGTTTTCCTTTAGTGAACTTGGATATCAGAAATTTTCTGAGACATTCGCATATAAATTTATTTTGCTTTGACCATGTCAAAAACATACTTGTGTAATTTTATCTGGTGAAGTTGGTGTTAAGAAATAATCTGCTGGGCGTTTTGCTTAGTATAAATTTTTGGTGATGGTTTTCAACAATACATTCAACTCGTGGCATTATTTTGATAGTAATGATACTTTGAATTTTGATGAATGTGGCTCTGTAGATATTTAGAAGTATTTACAGTACATCTCAACAATGACTGTATTTGCCGCACAA

Coding sequence (CDS)

ATGTTGAGGGTGGCGGCAAGGCGGCTCTCTTCTCTCTCCTCCTCTTCATGGCGTCCCGCCGCCTCCTCCACCGTTGTCTCCAAGGCTCCTCTCTCCCGTGACGACGAGGAGTGCAGATCCACCCCTTTATTCGTACCTCATTTGTACTCTCACTATCGAGGATTTGCTAGTGAGCACCTGATCCCAAAAGCTGAACATGGCATAATCCTTGATGTTCCAGCTACTGTGCATGCAATTAAGAATCCCTCGTCAAAAATAACGTATGATGAGTACAACCATGAACGATATCCGCCTGGTGATCCCAGCAAGAGAGCATTTGCTTACTTTGTTCTCACTGGTGGAAGATTTGTGTATGCTTCCCTTATTCGACTGCTTGTCCTCAAGTTTGTGCTGAGTATGTCTGCTAGTAAGGATGTCCTTGCGCTGGCATCACTTGAGGTTGATCTCTCAAGCATTGAGCCAGGGACTACTGTGACAGTGAAGTGGCGTGGAAAGCCAGTCTTCATCAGGCGCCGAACAGAGGATGACATCAAGCTGGCTAACAGTGTTGATCTTGGATCCCTGCGTGACCCACAGAAGGATGAAGAAAGAGTTAAGAACCCTGAGTGGCTTATTGTCATTGGTGTCTGCACTCATTTGGGTTGCATTCCTTTGCCAAATGCTGGAGACTATGGTGGATGGTTTTGTCCTTGCCATGGTTCTCATTATGACATCTCTGGTAGAATTCGCAAGGGTCCTGCACCATATAATCTTGAGGTACCCACTTACTCTTTCCTGGAAGACAACAAGTTGCTAGTTGGTTGA

Protein sequence

MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26639.1Spo26639.1mRNA


Homology
[Close]
BLAST of Spo26639.1 vs. NCBI nr
Match: gi|902128249|gb|KNA04172.1| (hypothetical protein SOVF_202070 [Spinacia oleracea])

HSP 1 Score: 545.0 bits (1403), Expect = 7.100e-152
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL 60
           MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL
Sbjct: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL 60

Query: 61  IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS 120
           IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS
Sbjct: 61  IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS 120

Query: 121 LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA 180
           LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA
Sbjct: 121 LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA 180

Query: 181 NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG 240
           NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG
Sbjct: 181 NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG 240

Query: 241 RIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           RIRKGPAPYNLEVPTYSFLEDNKLLVG
Sbjct: 241 RIRKGPAPYNLEVPTYSFLEDNKLLVG 267
[Close]
BLAST of Spo26639.1 vs. NCBI nr
Match: gi|731343455|ref|XP_010682901.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 485.7 bits (1249), Expect = 5.100e-134
Identity = 242/272 (88.97%), Postives = 252/272 (92.65%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPL-----FVPHLYSHYRGF 60
           M+RVAARRLSSLSSSSWRP ASS+ V   P SR DEE RS+ +       PH YSH+RGF
Sbjct: 1   MMRVAARRLSSLSSSSWRPTASSSTVFSKPPSR-DEEPRSSAMSDYFRLAPHFYSHHRGF 60

Query: 61  ASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120
           A+EHLIPKAEHGII DVPATV AIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR
Sbjct: 61  ATEHLIPKAEHGIIPDVPATVAAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120

Query: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED 180
           FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+D
Sbjct: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDD 180

Query: 181 DIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSH 240
           DIKLANSVDL SLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGD+GGWFCPCHGSH
Sbjct: 181 DIKLANSVDLESLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSH 240

Query: 241 YDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           YDISGRIRKGPAPYNLEVPTYSF+EDNKLL+G
Sbjct: 241 YDISGRIRKGPAPYNLEVPTYSFMEDNKLLIG 271
[Close]
BLAST of Spo26639.1 vs. NCBI nr
Match: gi|703078563|ref|XP_010090924.1| (Cytochrome b-c1 complex subunit Rieske-2 [Morus notabilis])

HSP 1 Score: 433.3 bits (1113), Expect = 3.000e-118
Identity = 217/281 (77.22%), Postives = 239/281 (85.05%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSS--SSWRP------AASSTVVSKAPL------SRDDEECRSTPLFVP 60
           MLRVAARRLSSLSS  S  RP      + +S+++S  P+      S DD   RS P   P
Sbjct: 1   MLRVAARRLSSLSSTDSLRRPNYSAAISTASSLLSPHPINASADSSSDDLPLRSFPSLTP 60

Query: 61  HLYSHYRGFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAF 120
           H +   RGFAS+ L P  EH ++LDVPATV A+KNP+SKI YDEYNHERYPPGDPSKRAF
Sbjct: 61  HFHIPSRGFASDSLTPSKEHNLVLDVPATVAAVKNPTSKIEYDEYNHERYPPGDPSKRAF 120

Query: 121 AYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 180
           AYFVLTGGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLE DLSSIEPG+TVTVKWRGKP
Sbjct: 121 AYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEADLSSIEPGSTVTVKWRGKP 180

Query: 181 VFIRRRTEDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGG 240
           VFIRRRTEDDIKLANSVDL SLRDPQ D ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GG
Sbjct: 181 VFIRRRTEDDIKLANSVDLNSLRDPQPDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGG 240

Query: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           WFCPCHGSHYDISGRIRKGPAPYNLEVPTY+FL++NKLL+G
Sbjct: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 281
[Close]
BLAST of Spo26639.1 vs. NCBI nr
Match: gi|590647919|ref|XP_007032033.1| (Cytochrome b-c1 complex subunit Rieske, mitochondrial [Theobroma cacao])

HSP 1 Score: 431.8 bits (1109), Expect = 8.700e-118
Identity = 215/274 (78.47%), Postives = 234/274 (85.40%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSS--SSWRPAASSTVVSKAPL-----SRDDEECRSTPLFVPHLYSHYR 60
           MLR A RRLSSL+S  S+WR   ++  ++  PL     S DD    S+  F  H     R
Sbjct: 1   MLRAATRRLSSLTSCPSAWRHHQAAAAIAPCPLINDTDSSDDLRSSSSFSFASHFILPTR 60

Query: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120
           GF SE L PK+EH +I DVP TV AIKNP+SKI YDEYNHER+PPGDPSKRAFAYFVLTG
Sbjct: 61  GFTSESLTPKSEHSMIPDVPGTVAAIKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDLGSLRDPQ+D  RVKNPEWLIVIGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDLGSLRDPQEDSARVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           SHYDISGRIRKGPAPYNLEVPTY+FLE+NKL++G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 274
[Close]
BLAST of Spo26639.1 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 8.700e-118
Identity = 213/274 (77.74%), Postives = 238/274 (86.86%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPL--SRDDEECRSTPLFV-----PHLYSHYR 60
           MLR+AARRLSSLSSS +RP  +S++     +  S D  + RS   F      PH   + R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120
           GFAS+ L    + G+I+D+PATV A+KNPSSKI YD+YNHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVD+GSLRDPQ+DEERVK+PEWL+V+GVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLL+G
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274
[Close]
BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QA72_SPIOL (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Spinacia oleracea GN=SOVF_202070 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 4.900e-152
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL 60
           MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL
Sbjct: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHLYSHYRGFASEHL 60

Query: 61  IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS 120
           IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS
Sbjct: 61  IPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYAS 120

Query: 121 LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA 180
           LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA
Sbjct: 121 LIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLA 180

Query: 181 NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG 240
           NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG
Sbjct: 181 NSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISG 240

Query: 241 RIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           RIRKGPAPYNLEVPTYSFLEDNKLLVG
Sbjct: 241 RIRKGPAPYNLEVPTYSFLEDNKLLVG 267
[Close]
BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6B1_BETVU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151780 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 3.600e-134
Identity = 242/272 (88.97%), Postives = 252/272 (92.65%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPL-----FVPHLYSHYRGF 60
           M+RVAARRLSSLSSSSWRP ASS+ V   P SR DEE RS+ +       PH YSH+RGF
Sbjct: 1   MMRVAARRLSSLSSSSWRPTASSSTVFSKPPSR-DEEPRSSAMSDYFRLAPHFYSHHRGF 60

Query: 61  ASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120
           A+EHLIPKAEHGII DVPATV AIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR
Sbjct: 61  ATEHLIPKAEHGIIPDVPATVAAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120

Query: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED 180
           FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+D
Sbjct: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDD 180

Query: 181 DIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSH 240
           DIKLANSVDL SLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGD+GGWFCPCHGSH
Sbjct: 181 DIKLANSVDLESLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSH 240

Query: 241 YDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           YDISGRIRKGPAPYNLEVPTYSF+EDNKLL+G
Sbjct: 241 YDISGRIRKGPAPYNLEVPTYSFMEDNKLLIG 271
[Close]
BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Match: W9QM11_9ROSA (Cytochrome b-c1 complex subunit Rieske-2 OS=Morus notabilis GN=L484_007559 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.100e-118
Identity = 217/281 (77.22%), Postives = 239/281 (85.05%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSS--SSWRP------AASSTVVSKAPL------SRDDEECRSTPLFVP 60
           MLRVAARRLSSLSS  S  RP      + +S+++S  P+      S DD   RS P   P
Sbjct: 1   MLRVAARRLSSLSSTDSLRRPNYSAAISTASSLLSPHPINASADSSSDDLPLRSFPSLTP 60

Query: 61  HLYSHYRGFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAF 120
           H +   RGFAS+ L P  EH ++LDVPATV A+KNP+SKI YDEYNHERYPPGDPSKRAF
Sbjct: 61  HFHIPSRGFASDSLTPSKEHNLVLDVPATVAAVKNPTSKIEYDEYNHERYPPGDPSKRAF 120

Query: 121 AYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 180
           AYFVLTGGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLE DLSSIEPG+TVTVKWRGKP
Sbjct: 121 AYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEADLSSIEPGSTVTVKWRGKP 180

Query: 181 VFIRRRTEDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGG 240
           VFIRRRTEDDIKLANSVDL SLRDPQ D ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GG
Sbjct: 181 VFIRRRTEDDIKLANSVDLNSLRDPQPDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGG 240

Query: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           WFCPCHGSHYDISGRIRKGPAPYNLEVPTY+FL++NKLL+G
Sbjct: 241 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 281
[Close]
BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Match: A0A061EKX1_THECC (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Theobroma cacao GN=TCM_017353 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 6.100e-118
Identity = 215/274 (78.47%), Postives = 234/274 (85.40%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSS--SSWRPAASSTVVSKAPL-----SRDDEECRSTPLFVPHLYSHYR 60
           MLR A RRLSSL+S  S+WR   ++  ++  PL     S DD    S+  F  H     R
Sbjct: 1   MLRAATRRLSSLTSCPSAWRHHQAAAAIAPCPLINDTDSSDDLRSSSSFSFASHFILPTR 60

Query: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120
           GF SE L PK+EH +I DVP TV AIKNP+SKI YDEYNHER+PPGDPSKRAFAYFVLTG
Sbjct: 61  GFTSESLTPKSEHSMIPDVPGTVAAIKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDLGSLRDPQ+D  RVKNPEWLIVIGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDLGSLRDPQEDSARVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           SHYDISGRIRKGPAPYNLEVPTY+FLE+NKL++G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 274
[Close]
BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Match: G7KXA6_MEDTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Medicago truncatula GN=MTR_7g084150 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.000e-117
Identity = 213/273 (78.02%), Postives = 242/273 (88.64%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSS-SWRPA-ASSTVVSKAPL---SRDDEECRSTPLFV-PHLYSHYRG 60
           MLRVA+++LSSLS+S SWR   A+S+ +SK P+   S   ++ RS P  + P  +  +RG
Sbjct: 1   MLRVASKKLSSLSASPSWRSYHAASSFLSKNPIPPPSSTSDQRRSDPFSIHPEFFLPFRG 60

Query: 61  FASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGG 120
           FA+E LI   E+ II ++PATV A+KNPSSKI YDEYNHER+PPGDPSKRAFAYFVLTGG
Sbjct: 61  FATESLIHTKENSIIPEIPATVSAVKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLTGG 120

Query: 121 RFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE 180
           RF YASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+
Sbjct: 121 RFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTD 180

Query: 181 DDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGS 240
           DD+KLANSVD+GSLRDPQ+D ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHGS
Sbjct: 181 DDVKLANSVDVGSLRDPQQDSERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGS 240

Query: 241 HYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           HYDISGRIRKGPAPYNLEVPTYSFLE+NKLL+G
Sbjct: 241 HYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 273
[Close]
BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.300e-113
Identity = 206/272 (75.74%), Postives = 226/272 (83.09%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAA--SSTVVSKAPLSRDDEECRS---TPLFVPHLYSHYRGF 60
           MLR+A RR SSLS    R  A  SS  +S    S DD+       +P        H RGF
Sbjct: 1   MLRIAGRRASSLSRWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGF 60

Query: 61  ASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120
           +S  +    + G++ D+P TV AIKNP+SKI YDE+NHERYPPGDPSKRAFAYFVLTGGR
Sbjct: 61  SSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGR 120

Query: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED 180
           FVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED
Sbjct: 121 FVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED 180

Query: 181 DIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSH 240
           DI LANSVDLGSLRDPQ+D ERVK+PEWL+VIGVCTHLGCIPLPNAGD+GGWFCPCHGSH
Sbjct: 181 DINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSH 240

Query: 241 YDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           YDISGRIRKGPAPYNLEVPTYSFLE+NKLL+G
Sbjct: 241 YDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272
[Close]
BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.300e-113
Identity = 210/283 (74.20%), Postives = 236/283 (83.39%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLS------RDDEECRS---------TPLFV 60
           MLRVA RRLSS  S SWRPAA+   V++ PL+      RDD+  R          +P FV
Sbjct: 1   MLRVAGRRLSS--SLSWRPAAA---VARGPLAGAGVPDRDDDSARGRSQPRFSIDSPFFV 60

Query: 61  PHLYSHYRGFAS-EHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKR 120
                  RGF+S E ++P+ +   + D+PATV A+KNP+ K+ YDEYNHERYPPGDPSKR
Sbjct: 61  AS-----RGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKR 120

Query: 121 AFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRG 180
           AFAYFVL+GGRF+YASL+RLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRG
Sbjct: 121 AFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRG 180

Query: 181 KPVFIRRRTEDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDY 240
           KPVFIRRRTEDDIKLANSVD+ SLR P++D ERVKNPEWL+VIGVCTHLGCIPLPNAGD+
Sbjct: 181 KPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 240

Query: 241 GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           GGWFCPCHGSHYDISGRIRKGPAP+NLEVPTYSFLE+NKLLVG
Sbjct: 241 GGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKLLVG 273
[Close]
BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.500e-113
Identity = 202/268 (75.37%), Postives = 227/268 (84.70%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRS-TPLFVPHLYSHYRGFASEH 60
           MLRVA RRLSS   S+ R +++    S   ++ D    RS +P          RGF+S  
Sbjct: 1   MLRVAGRRLSS---SAARSSSTFFTRSSFTVTDDSSPARSPSPSLTSSFLDQIRGFSSNS 60

Query: 61  LIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYA 120
           + P  + G++ D+PATV AIKNPSSKI YD+ NHERYPPGDPSKRAFAYFVLTGGRFVYA
Sbjct: 61  VSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYA 120

Query: 121 SLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKL 180
           S +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+DDIKL
Sbjct: 121 SSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKL 180

Query: 181 ANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDIS 240
           ANSVDLG+LRDPQ+D ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYDIS
Sbjct: 181 ANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDIS 240

Query: 241 GRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           GRIRKGPAPYNLEVPTYSFLE+NKLL+G
Sbjct: 241 GRIRKGPAPYNLEVPTYSFLEENKLLIG 265
[Close]
BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.400e-112
Identity = 202/274 (73.72%), Postives = 230/274 (83.94%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVP-------HLYSHYR 60
           MLR+A R+LSS +++     +SS   ++ P +  D+   S+P   P            +R
Sbjct: 1   MLRIAGRKLSSSAATR----SSSAFFTRNPFTFTDDS--SSPARSPSPASLASQFLDQFR 60

Query: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120
           GF+S  + P  + G++ D+PATV AIKNPSSKI YD+ NHERYPPGDPSKRAFAYFVLTG
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DI LANSVDLGSLRDPQ+D ERVKNPEWL+VIGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           SHYDISGRIRKGPAPYNLEVPTYSF+E+NKLL+G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
[Close]
BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.500e-112
Identity = 200/272 (73.53%), Postives = 228/272 (83.82%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVP-----HLYSHYRGF 60
           MLR+A R+LSS +++     +SS   ++ P +  D+    T    P          +RGF
Sbjct: 1   MLRIAGRKLSSSAAAR----SSSAFFTRNPFTFTDDSSSPTRSPSPTSLASQFLDQFRGF 60

Query: 61  ASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTGGR 120
           +S  + P  + G++ D+PATV AIKNPSSKI YD+ NHERYPPGDPSKRAFAYFVLTGGR
Sbjct: 61  SSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGR 120

Query: 121 FVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTED 180
           FVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT++
Sbjct: 121 FVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDE 180

Query: 181 DIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSH 240
           DI LANSVDLGSLRDPQ+D ERVKNPEWL+VIGVCTHLGCIPLPNAGD+GGWFCPCHGSH
Sbjct: 181 DINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSH 240

Query: 241 YDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           YDISGRIRKGPAPYNLEVPTYSF+E+NKLL+G
Sbjct: 241 YDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268
[Close]
BLAST of Spo26639.1 vs. TAIR (Arabidopsis)
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 396.7 bits (1018), Expect = 1.100e-110
Identity = 204/274 (74.45%), Postives = 229/274 (83.58%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKA-PLSRDDEECRSTPLFVPH--LYSHYR---- 60
           MLRVA RRL S+S  S    A+S VVS+   LS    +  S P  +P   L S++R    
Sbjct: 1   MLRVAGRRLFSVSQRS--STATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYHRSLIR 60

Query: 61  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 120
           GF+S+ L    E G   +VPATV A+K P+SKI YD++NHERYPPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180
           GRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPGTTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVD+GSLRDPQ+D  RVKNPEWL+V+GVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           SHYDISGRIRKGPAPYNLEVPTYSFLE+NKLL+G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272
[Close]
BLAST of Spo26639.1 vs. TAIR (Arabidopsis)
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 395.2 bits (1014), Expect = 3.200e-110
Identity = 202/276 (73.19%), Postives = 225/276 (81.52%), Query Frame = 1 

		  

Query: 1   MLRVAARRLSSLSSSSWRPAASSTVVSKAPLSRDDEECRSTPLFVPHL----YSHY---- 60
           MLRVA RRL S+S  S    A+S V+S+     D     S    VP      ++ Y    
Sbjct: 1   MLRVAGRRLFSVSQRS--STATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSYHRSV 60

Query: 61  -RGFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVL 120
            RGFAS+ +    E G   +VPATV A+K P+SKI YD++NHERYPPGDPSKRAFAYFVL
Sbjct: 61  IRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVL 120

Query: 121 TGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180
           +GGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPGTTVTVKWRGKPVFIRR
Sbjct: 121 SGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPC 240
           RTEDDIKLANSVD+GSLRDPQ+D  RVKNPEWLIV+GVCTHLGCIPLPNAGDYGGWFCPC
Sbjct: 181 RTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPC 240

Query: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 268
           HGSHYDISGRIRKGPAPYNLEVPTYSFLE+NKLL+G
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274
[Close]
BLAST of Spo26639.1 vs. TAIR (Arabidopsis)
Match: AT4G03280.1 (photosynthetic electron transfer C)

HSP 1 Score: 59.3 bits (142), Expect = 4.200e-9
Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 1 

		  

Query: 198 VKNPEWLIVIG---VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 257
           V+N + L   G   VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L + 
Sbjct: 142 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALA 201

Query: 258 TYSFLEDNKLL 266
                E  K+L
Sbjct: 202 HADIDEAGKVL 211
The following BLAST results are available for this feature:
BLAST of Spo26639.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902128249|gb|KNA04172.1|7.1e-152100.hypothetical protein SOVF_2020... [more]
gi|731343455|ref|XP_010682901.1|5.1e-13488.9PREDICTED: cytochrome b-c1 com... [more]
gi|703078563|ref|XP_010090924.1|3.0e-11877.2Cytochrome b-c1 complex subuni... [more]
gi|590647919|ref|XP_007032033.1|8.7e-11878.4Cytochrome b-c1 complex subuni... [more]
gi|659072408|ref|XP_008465498.1|8.7e-11877.7PREDICTED: cytochrome b-c1 com... [more]
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BLAST of Spo26639.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QA72_SPIOL4.9e-152100.Cytochrome b-c1 complex subuni... [more]
A0A0J8C6B1_BETVU3.6e-13488.9Cytochrome b-c1 complex subuni... [more]
W9QM11_9ROSA2.1e-11877.2Cytochrome b-c1 complex subuni... [more]
A0A061EKX1_THECC6.1e-11878.4Cytochrome b-c1 complex subuni... [more]
G7KXA6_MEDTR3.0e-11778.0Cytochrome b-c1 complex subuni... [more]
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BLAST of Spo26639.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
UCRI2_TOBAC1.3e-11375.7Cytochrome b-c1 complex subuni... [more]
UCRI_MAIZE1.3e-11374.2Cytochrome b-c1 complex subuni... [more]
UCRI_SOLTU6.5e-11375.3Cytochrome b-c1 complex subuni... [more]
UCRI3_TOBAC1.4e-11273.7Cytochrome b-c1 complex subuni... [more]
UCRI5_TOBAC2.5e-11273.5Cytochrome b-c1 complex subuni... [more]
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BLAST of Spo26639.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G13430.11.1e-11074.4Ubiquinol-cytochrome C reducta... [more]
AT5G13440.13.2e-11073.1Ubiquinol-cytochrome C reducta... [more]
AT4G03280.14.2e-940.8photosynthetic electron transf... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004192Ubiquinol cytochrome reductase, transmembrane domainGENE3D1.20.5.270coord: 90..127
score: 4.
IPR004192Ubiquinol cytochrome reductase, transmembrane domainPFAMPF02921UCR_TMcoord: 89..138
score: 4.5
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 205..216
score: 2.8E-17coord: 227..239
score: 2.8E-17coord: 239..251
score: 2.8
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitTIGRFAMsTIGR01416TIGR01416coord: 123..267
score: 1.5
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 2..267
score: 4.7E
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3D2.102.10.10coord: 128..266
score: 6.6
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 150..253
score: 1.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 197..265
score: 17
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 129..266
score: 5.37
NoneNo IPR availablePANTHERPTHR10134:SF1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 2..267
score: 4.7E
NoneNo IPR availableunknownSSF81502ISP transmembrane anchorcoord: 84..140
score: 4.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0055085 transmembrane transport
biological_process GO:0006281 DNA repair
biological_process GO:0006310 DNA recombination
biological_process GO:0009853 photorespiration
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009225 nucleotide-sugar metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009409 response to cold
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005829 cytosol
cellular_component GO:0044424 intracellular part
cellular_component GO:0071011 precatalytic spliceosome
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0070469 respiratory chain
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0016602 CCAAT-binding factor complex
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression