Spo25468 (gene)

Overview
NameSpo25468
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEukaryotic protein of unknown function (DUF872)
LocationSpoScf_00825 : 250714 .. 255509 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTATGTCCAAGTAAAACTCGTAAAACTTGTTCTGAATCTCGAAAAGATAGACTTTCTCGTTGAACTAGTGGTACTGTATACCAGACTTCTGATCAAAGGCAATAAACTCTGAATAACTAGTCTAACTAACTACGCAACAATAACCAGAAACTTTATCTTCTTCTTCTCTCTAAAAAAATCCCCCTTTTGTTATCTTCATCATCGTCTCCCACTCTCGTCGTCGTCACCACCACCACCACCACCACCACTGACACAGGAAACGTTTCATCATCTGCAACATCAACAATTTCGAAGCTCGCAAGAAGTGTTTGTTAACAATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGTATTAACCCTAACCCTAAATTTATAATTTATTTACTGTTTTTAATTCGGATTGTTTTGAATTTTTCTTGGTATTCATGAAATTTGTTTAATTGAGACTGAAATTTGTTTAATTTTTTATTTATTTTGTGTCTATTAATCTTAACCCTAATTCGTTTATTTCATCGAATGCCTCTTTCAATTTGATTTTTTTTTTGTTGAAATTGAAACAGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAAAGGTCGAATGTTAGATTTAATACTCTACTTGATGTGTTTTCTGTACATAGAAATGGATTAGTGATCAAAAGAAATGAAATATCACCTTTGTTTCTAGTTGACAACTGTTATTGTTGGTATTTCTTTTGTGGAGAGGTGATGTGGTGTTGGTGTTAAGGTGTTTTTATTCCGTGCTGTGATCTCGAATAATCCGCGTCCTGTTATGTAGTGATGTTGTGGACTTGCTTGAGATTTCACAATGTGAAGGATGTAATTGTTTCTTGTGTATCCGACTATCCACGGATTTAAATCAGCCTCTTTTGTGGTTTTAATGAAATTTCTGTGTACTTAGTGTTCCGTTTTATGCAGTGTGATGCTTACTCACTTCAATATATGCTTCTTTTAGCCTTGATTTTATCTCGCCTTTTTTTATTCCTCAATGGTTTTTTTTCCTCTTGAAGAGGTATGGGAGGTTCTCAGATTGCCATAATCGAAAATGTTCTCTGTTTCGAGTAGTACTCTTCACTAGTGTTTTCTTTTCAAGCTATCTTATTTACTTTTGTATTCAAGTTGTATGTTTATTTTGGATATGTTTTATCTGAGCTAGAAAACGATGAGAACATAGAATTTTGAAGTGCTAGCCTTTAGCTTGTAGTTAATCTTTGAAGCTTGAAACATTCTCGTTGATTATATCATTTTAATTTCCCAATCTGTGTTATGGGGATCTTCATTTATCTCATGTAGGTGTGTTGGACCCTTGAGACTCTAACATGGGTATTGACACCTTGCCACTTCTTTTGGGACCAAAACCATGGATCAATTAACATTCGGACAGGTACCCGTGGCCGATTTAAGGTCCCTAATTTGAAGTAACATAGGTCATCTTAGGGTTGGCATGTGAGTCATCAGTCTACTCCAAAGCAATGCTCTTTAATTGCCAGAGTACGATTTTGTTATGTATTTTATGATTTAAACCAAATCCTCCATCCTTGGAAATATGCCTTTGCAGTTTCTGTCTTCTCCATCAGGCTAGTCATATAATGTATTTTTTTTGGATATGAGTGCTACCTTGTTTAGGCATAACACATATTTTTTCTTCATCTCATACTTTTGTGAATGATGTGATCCTGCGAGCAGAACATAGCTAGATTCACTACTATGAGCATCCACCAGAAGTTGAAAATAGGGACTGGTATTAAACTATTGCCCGGAGTTGCATTTTCGGGATCGTCCCTTTTTCCACTAGTAGAACAAAGCTTGTATGAGCGAGCCTCTATGCTCATGCTAGCCTCAGCAGTCAGCACTATGATAGCTGCTTTAGCCTTTAAAATTTTAGATGATACGAAGTAACTAGAAATCGATTTAAAGCTGGTTCCTAGTTGGGCTAAGAGTTTGATCTTTCATTTCTGTTCCTAATTCCTATACTACCCACTTTTAACCTTTAATATATCATTTGTTTTGAAGCTTGTACTTATCACCCACCTGATAAAGAGGCGATGTAGGATTCTGGTCACAATTGAGGACTCTGTTTATGCAGTATTGACTTTATGGTCTTATTTAACATGAAGACTCCACACTATTACTTATAGACAGCATGTTTGGGGTTTACAGCTGAAGCTTTGGATGAAAGTTCCTTTCTTGGAAATTTCATTTCTCACAATATTAGGCTTATAGGTCATTATGGTCTACTGTCAACTTTGAGTTGCTTGTGAAACTCCTAAGCCTAGGAATGCTAGATGTAGAAGACTGATAATTTGGTGGTTTTGAAGTGGTGCTACTCTTTCAGGTTTGTTTTGGATATGATTCATGATTATGTAATGTGTGATTGGCAGTTAGATGGCTATGTCTTTCCATCTACTTTCGTTATATACGTGTCCTCTTGTTTTGCCCGCTTCCCTTTTTTTGGTGTATACCTCTCTTAAAACAATACTACTACGGTTGAACTGGGATGTCCGTAGGTGATAAGTTAATTCCTTCAGCTAATCAGAAGCACCGATTATCTGTTTTGGTTTTCTATTATCATCGGAAGGAAGGTTTCATTCAAATCGATGTTTTTCGTTTCATACATGCCTTTGTAGTGGAAAACCTGCCTTTTTTAAATTGTAAGCATGCAATAATAGTGAGAGCTGTACATGTCATTTCTTCTTGCATTACTTACTGTTGTCGAGGTAATTGAAGAAAGATATCAATTTAAGACCCATGCCTTGAAGAATTGGCAATTTTGCATTATGTTTTGATCTTAGTAGAAGGGTTAAAATCAAAGATGTAACTATGTTGAGTCCACAATGACCTACCCTAGTGTTTCTGAAGCCTGAAGACGAGATCTTTTCCAGAGGCGAAGAGAAAATTTGTTGTGACGAGACAAACCTGGTTAGGAAAAGAAACAGAAACAAGATAAAGAGAATGAACCATTTGTAAGTTTTTGATCATCTTGCACTGTAATTACCCGTATTAAGCTCGTAACCTACTCCTTTTTTAAGGTTGCAAGAGTAATTAAGTTCTTTTACGCTCTTTTTCCATATATAGTTGATGGTCTGAAAGAGTTTGACCCAAGCTCTTGTCTCTGTTTCCATGGAAAAAGCTGCACATTGTTATCAGTATGTTGTCTGTCCATCTGCATTATTAAGAATATCTTCTCTGGAAACATCAGTTTTAGGATATTTTGGTAAGTTTCGCCGAGGATAGGTGGGCAAGTATGATGCTTTTAATGTACTGTGCATGGTAATTAGGTGGTTTACAGAATTGTTATCAGCATTACTGTGATTAAATCCGGAAAAGACTAGCTTTTGGTGAGTATTAGGTGGATCCACTATATGAACTCCTTTGAACTGCTTGATTATTAATTTATTATGTTCCTCGTTTGCATGTGCTAGGTTAGTGTTCCATTCATATTATTTGTTGGAAAGACTAACATCAAACATGATTTCGATATTGCTTTTGTTTTTGTTGCTGTGAACTTCCTTTACCCGTGTTTTGCAACTTCTTCCGTCTGGTTGGTCTTTTCACTGCTGGTAATATAATGCACTCACAGGTCTTGGAGAGCAAACTAGCAGAACACGCCTGATTCATAAGGTAATCCTTTTTGTTCTGCTGTGTTCTTCCCCTTCGCCTTACCCCCTTCTGAGAACAATTACACTTGATGTGTGATGAATTATGCATTCTCCTCCTTTTTGTTCTGTTGAGGGCCGGGTTGGGCTCCCACGGCCCAATGGGCCTGACCCACCCAAGCCCGTTTGGAACGGGAGGCACGGCCGCGTGCCCTCTTGCTGGGTCGGGCCTAGACCATGGTAGTCCTTTTCTGTTAGAACAATTACACTTGACTGTCACATTCTCCTTTTTGTCTCAACGCATCATGCTACGGCAAAGATGATTGTGGGCCGGGTCGGGCTCCCGCTGCCCAGTGGGCCTGGCCCACCCAAGCCCACTTGGAACGGGAGGCACGGCCGCGTGCCCTCGTGCTGGGTCGGGCCTAGCCCCACGGTAATCCTTTTTGTTCTGCTGTGTCTTCCCTTTTGCCCACCCCCTTCTGAGAATTATGCATTCTCCTTCTTTTTGTCTCAATGCATCATGCTACAGCAAAGATGGTTGTGGGCCTGGTCGGGCTTCAGGCCTATCCCATGGCCCAATGGGCCTGACCTATGCTGAGCCCGCTTGGGACGGGAGGCATGGCCGCGTGCCCTTTTACTGGGTCGGACCTAGCCCACGGTAATCCATTTTGTTCTGCTGTACTCTTCCCTTTTGCCTACCCCCTTTTTCTCCTTAATCCTTATGCTTGGTTTAGGGTTTCCTTTCGATCCAGAGTCTTCAACTCATTCTCCTCCGTTTAACCGGTTTGCCACTTTGCCGTGAACGGATCGACATCGAATCTTTTAGTAGGGATAGTCTGTGATTTGCATGTTCTCGACCCAAGTTCTTTCCACCGATGTTTAGATTATGAACCTTCTGTCGTCTTCCAGATTCCGAAACCACTTGTG

mRNA sequence

TAATTATGTCCAAGTAAAACTCGTAAAACTTGTTCTGAATCTCGAAAAGATAGACTTTCTCGTTGAACTAGTGGTACTGTATACCAGACTTCTGATCAAAGGCAATAAACTCTGAATAACTAGTCTAACTAACTACGCAACAATAACCAGAAACTTTATCTTCTTCTTCTCTCTAAAAAAATCCCCCTTTTGTTATCTTCATCATCGTCTCCCACTCTCGTCGTCGTCACCACCACCACCACCACCACCACTGACACAGGAAACGTTTCATCATCTGCAACATCAACAATTTCGAAGCTCGCAAGAAGTGTTTGTTAACAATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAAAGGTCTTGGAGAGCAAACTAGCAGAACACGCCTGATTCATAAGGTAATCCTTTTTGTTCTGCTGTGTTCTTCCCCTTCGCCTTACCCCCTTCTGAGAACAATTACACTTGATGTGTGATGAATTATGCATTCTCCTCCTTTTTGTTCTGTTGAGGGCCGGGTTGGGCTCCCACGGCCCAATGGGCCTGACCCACCCAAGCCCGTTTGGAACGGGAGGCACGGCCGCGTGCCCTCTTGCTGGGTCGGGCCTAGACCATGGTAGTCCTTTTCTGTTAGAACAATTACACTTGACTGTCACATTCTCCTTTTTGTCTCAACGCATCATGCTACGGCAAAGATGATTGTGGGCCGGGTCGGGCTCCCGCTGCCCAGTGGGCCTGGCCCACCCAAGCCCACTTGGAACGGGAGGCACGGCCGCGTGCCCTCGTGCTGGGTCGGGCCTAGCCCCACGGTAATCCTTTTTGTTCTGCTGTGTCTTCCCTTTTGCCCACCCCCTTCTGAGAATTATGCATTCTCCTTCTTTTTGTCTCAATGCATCATGCTACAGCAAAGATGGTTGTGGGCCTGGTCGGGCTTCAGGCCTATCCCATGGCCCAATGGGCCTGACCTATGCTGAGCCCGCTTGGGACGGGAGGCATGGCCGCGTGCCCTTTTACTGGGTCGGACCTAGCCCACGGTAATCCATTTTGTTCTGCTGTACTCTTCCCTTTTGCCTACCCCCTTTTTCTCCTTAATCCTTATGCTTGGTTTAGGGTTTCCTTTCGATCCAGAGTCTTCAACTCATTCTCCTCCGTTTAACCGGTTTGCCACTTTGCCGTGAACGGATCGACATCGAATCTTTTAGTAGGGATAGTCTGTGATTTGCATGTTCTCGACCCAAGTTCTTTCCACCGATGTTTAGATTATGAACCTTCTGTCGTCTTCCAGATTCCGAAACCACTTGTG

Coding sequence (CDS)

ATGGCGTATGTTGATCATGCCTTCTCCATTACAGATGAAGATATCATGATGGACAACACTTATGCAATCAACAATAAACCTCCTATTAAAGAGATCGCCTTAGCTGTCTCTCTCCTCGTCTTCGGTGTTGTCGGTATCGTCCTCGGGATTTTCATGGCCGTCAATCATGTTGGTGGTGATCGAGCTCATGGGATGTTCTTTGCAATATTAGGGGCGATCTTGTTCCTACCGGGTTTCTATTATACAAGGATTGCTTACTACGCGTACAAGGGTTACAAGGGTTTTTCTTTCTCCAACATTCCTCCCGTTTAA

Protein sequence

MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGDRAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25468.1Spo25468.1mRNA


Homology
[Close]
BLAST of Spo25468.1 vs. NCBI nr
Match: gi|902151251|gb|KNA05498.1| (hypothetical protein SOVF_189790 [Spinacia oleracea])

HSP 1 Score: 205.7 bits (522), Expect = 3.900e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. NCBI nr
Match: gi|731367784|ref|XP_010695798.1| (PREDICTED: transmembrane protein 230-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 193.0 bits (489), Expect = 2.600e-46
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDN+YAINNKPPI+EIALAVSLLVFGV+GIVLGI MA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. NCBI nr
Match: gi|743816104|ref|XP_011020094.1| (PREDICTED: transmembrane protein 230-like [Populus euphratica])

HSP 1 Score: 185.3 bits (469), Expect = 5.500e-44
Identity = 89/103 (86.41%), Postives = 98/103 (95.15%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDED+M++ +YA+NNKPPIKEIALAVSLLVFGVVGIVLGIFM  N VGGD
Sbjct: 1   MAYVDHAFSITDEDLMVETSYAVNNKPPIKEIALAVSLLVFGVVGIVLGIFMTCNSVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAY+AYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. NCBI nr
Match: gi|661893196|emb|CDP03005.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 183.7 bits (465), Expect = 1.600e-43
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DEDIMMD  Y +NN+PPIKEIALAV+LLVFG +GIVLG+ MAVN VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. NCBI nr
Match: gi|747047901|ref|XP_011069937.1| (PREDICTED: transmembrane protein 230-like [Sesamum indicum])

HSP 1 Score: 183.3 bits (464), Expect = 2.100e-43
Identity = 88/103 (85.44%), Postives = 97/103 (94.17%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMM+ +Y++NNKPPIKEIALAV+LLVFGV+GIV GI MA+N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMETSYSVNNKPPIKEIALAVALLVFGVLGIVFGIIMAINQVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG FFAILG +LFLPGFYYTRIAYYAYKGYKGFSF+NIPPV
Sbjct: 61  RAHGTFFAILGGLLFLPGFYYTRIAYYAYKGYKGFSFANIPPV 103
[Close]
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFP1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_189790 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.700e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E2T6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155360 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.800e-46
Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIMMDN+YAINNKPPI+EIALAVSLLVFGV+GIVLGI MA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDNSYAINNKPPIREIALAVSLLVFGVIGIVLGILMAANRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A0A068U364_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041466001 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.100e-43
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DEDIMMD  Y +NN+PPIKEIALAV+LLVFG +GIVLG+ MAVN VGGD
Sbjct: 1   MAYVDHAFSISDEDIMMDTPYTVNNRPPIKEIALAVALLVFGTLGIVLGVIMAVNKVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG ILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGLFFAILGGILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: A9PGK0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.500e-43
Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDED+M++ +YA+NNKPPIKEIALA+SLLVFGV GIVLGIFM  N VGGD
Sbjct: 1   MAYVDHAFSITDEDLMLETSYAVNNKPPIKEIALAISLLVFGVAGIVLGIFMTYNSVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAY+AYKGY GFSFSNIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYFAYKGYTGFSFSNIPPV 103
[Close]
BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Match: B9SX69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0548540 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.500e-43
Identity = 84/103 (81.55%), Postives = 97/103 (94.17%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITD+D+M++ +Y +NN+PPIKEIALAV+LLVFGV GIVLGIFM VN +GGD
Sbjct: 1   MAYVDHAFSITDDDLMLETSYVVNNRPPIKEIALAVALLVFGVTGIVLGIFMTVNRIGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           RAHG+FFAILG +LF+PGFYYTRIAYYAYKGYKGFSF+NIPPV
Sbjct: 61  RAHGLFFAILGVVLFIPGFYYTRIAYYAYKGYKGFSFANIPPV 103
[Close]
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_CHICK (Transmembrane protein 230 OS=Gallus gallus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.000e-10
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1 

		  

Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALAV L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116
[Close]
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_BOVIN (Transmembrane protein 230 OS=Bos taurus GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.900e-10
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1 

		  

Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116
[Close]
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_PONAB (Transmembrane protein 230 OS=Pongo abelii GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.900e-10
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1 

		  

Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116
[Close]
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_HUMAN (Transmembrane protein 230 OS=Homo sapiens GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-9
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1 

		  

Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116
[Close]
BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Match: TM230_MOUSE (Transmembrane protein 230 OS=Mus musculus GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-9
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1 

		  

Query: 26  KPPIKEIALAVSLLVFGVVGIVLGIFMAVNHV---GGDRAHGMFFAILGAILFLPGFYYT 85
           K P K IALA  L + G   I++G  +   ++   G DRA  +   I+G ++FLPGFY+ 
Sbjct: 40  KIPYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHL 99

Query: 86  RIAYYAYKGYKGFSFSNIP 102
           RIAYYA KGY+G+S+ +IP
Sbjct: 100 RIAYYASKGYRGYSYDDIP 116
[Close]
BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 174.1 bits (440), Expect = 4.500e-44
Identity = 81/103 (78.64%), Postives = 93/103 (90.29%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSITDEDIM++ +Y +NN+PP+KEIALAV+LLVFG +GIV G FMA N VGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
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BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 166.4 bits (420), Expect = 9.300e-42
Identity = 77/103 (74.76%), Postives = 91/103 (88.35%), Query Frame = 1 

		  

Query: 1   MAYVDHAFSITDEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGD 60
           MAYVDHAFSI+DED+M+  +Y ++N+PP+KEI+LAV LLVFG +GIVLG FMA N VGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGMFFAILGAILFLPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG +LF+PGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103
[Close]
BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872))

HSP 1 Score: 70.9 bits (172), Expect = 5.300e-13
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 1 

		  

Query: 12  DEDIMMDNTYAINNKPPIKEIALAVSLLVFGVVGIVLGIFMAVNHVGGDRAHGMFFAILG 71
           D D   D +    ++ P K IALAV LL  G + ++L  F+ + H+ GD + G    +LG
Sbjct: 30  DFDPRFDYSPKAFDRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLG 89

Query: 72  AILFLPGFYYTRIAYYAYKGYKGFSFSNIP 102
            + FLPGFY TRIAYY+++G +G+ F+ IP
Sbjct: 90  ILTFLPGFYETRIAYYSWRGAEGYRFAAIP 119
The following BLAST results are available for this feature:
BLAST of Spo25468.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902151251|gb|KNA05498.1|3.9e-50100.hypothetical protein SOVF_1897... [more]
gi|731367784|ref|XP_010695798.1|2.6e-4692.2PREDICTED: transmembrane prote... [more]
gi|743816104|ref|XP_011020094.1|5.5e-4486.4PREDICTED: transmembrane prote... [more]
gi|661893196|emb|CDP03005.1|1.6e-4386.4unnamed protein product [Coffe... [more]
gi|747047901|ref|XP_011069937.1|2.1e-4385.4PREDICTED: transmembrane prote... [more]
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BLAST of Spo25468.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFP1_SPIOL2.7e-50100.Uncharacterized protein OS=Spi... [more]
A0A0J8E2T6_BETVU1.8e-4692.2Uncharacterized protein OS=Bet... [more]
A0A068U364_COFCA1.1e-4386.4Uncharacterized protein OS=Cof... [more]
A9PGK0_POPTR5.5e-4383.5Putative uncharacterized prote... [more]
B9SX69_RICCO5.5e-4381.5Putative uncharacterized prote... [more]
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BLAST of Spo25468.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TM230_CHICK4.0e-1046.8Transmembrane protein 230 OS=G... [more]
TM230_BOVIN8.9e-1045.5Transmembrane protein 230 OS=B... [more]
TM230_PONAB8.9e-1045.5Transmembrane protein 230 OS=P... [more]
TM230_HUMAN1.5e-945.5Transmembrane protein 230 OS=H... [more]
TM230_MOUSE1.5e-945.5Transmembrane protein 230 OS=M... [more]
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BLAST of Spo25468.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G29850.14.5e-4478.6Eukaryotic protein of unknown ... [more]
AT2G19350.19.3e-4274.7Eukaryotic protein of unknown ... [more]
AT3G29170.15.3e-1342.2Eukaryotic protein of unknown ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008590Protein of unknown function DUF872, transmembranePFAMPF05915DUF872coord: 28..101
score: 3.2
NoneNo IPR availablePANTHERPTHR15664C20ORF30 PROTEINcoord: 1..102
score: 6.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo017270.69Barchart | Table
Spo004980.67Barchart | Table
Spo249250.65Barchart | Table