Spo17974 (gene) | SpinachBase

Overview


Name	Spo17974
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Stress responsive protein
Location	SpoScf_00873 : 227831 .. 240042 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAGCATTTTTGCAGGTCGATCTCTCTCTCGGAAGTATCGACCACTATTTCACTCTCCTTCTTCAAGCTGATGAAGAGGAAGAAGACGAAGAAGTGAGAGCAGAGAAGAAAGTCGTCAGTTGAGGAGGAGGAGATGTTGCAATGGAGACCACATTATGTGCTGCAGATGTGCACATCTGCCTTTGCTAACTTGCGCATTCACTAGGGTGGGTTGGGTGACCATATTTCTACGAGTTAAAGATAAAGAATGGGTCTCACCTTTTGAGTTTTTCACCTTTTGAGTTTTTCACCTTTTGAGTTTTTCACCTTTTGGGACTTATACTTTTTTTTTCACCCTTTGGGATCTCAACTTCACTTTCCGGCAAATTAACTCACCGTTAACTCACCGTTAACTCACCTCTAACCATAGCATAAATAATTAAAAAAAACAATTTAAAGCAAATTAAAATGACAAAAATTAATGAACGTTGTTGCAGCTACTTGCTTGCTTGCTGCTTCTCTGTCAAATATCTCAAAATAATACAGCAGCCATATCTTAAAAAAAATACAACATCCATATCTTAAAGAAAAATACAGCAGCTATACTTAAAAAAAAAATACAGCAGCTTTCTAGTTACTGCTCTTAAATAAAAATACAACAGTGCATAATTGTTCTAACCAAAAACAAAAGCTTGCTTAATTGTTTTACTGTAATCAGGTTCAGTTTAAGCAAAATTAGGGTCAACTGCTTTAAGAAAAACCAGGTCCAACAAGTTTAAAGAAATCAACAAAATCAGTAGGTTTGCAATCAAGTCCAGTAAGTTTGAAGAACAAAATTTGCAGAACTCGGCGAATTCATCAAGTTTGAAGCCTACATTTCATGACTGGCAGGAAAGAGAATGAATGATTAGTCGATTGTTCAGCAGAATTCAACAAGTTGTAATTTTTTATGCTTTTTTTGGTAATTAATTCACTAATTATGTACAAGTAACATACTTGATAATGTAAGCCTCCATGGTCTGTAATTGCTGATGAATTTGCAACTTGATCATGTGAAGTTGTTGATGCAACACTTGTTTGTGATCCAAGTGTGTTAATGAACTACCAAATTATTTCAAATTGTGTTAGTATATATAATAAACGTTGTTGCAAATTTATTATTCATGACATATTGTAAGTAATGAAAACATACTCGATTAAACGAAGACACGATAAAACAAAGACACGAGTATTTGAGCTAAAACGAAGAATCGATACAAACACTTACCATAGCCTGCCTTTGAAAGCCATTAGGATAAGTGTAAACCCCAACACCTTTGTTGTGCATTGGTACAAATGTCTTTGAATTCTGAGTTGGTGCAAACCCCTGCTGTGCATTCACATACATTGGTTGTTTCCCCTTAGCCTGTTTCTTTTGTTTTGGAGCAACTGAAACCCCTGTTTCTGCTTGAGATGCTGTTGTTTCTATTTGTGTTGACTGAGTAGGTGTTGTTGCTGTCTTCTTAGCAACAGGTGGTCCATTTGGTACCTTAAGAGGCATAGAACACTTCCTTTTATTGTGCTCCACCTCCCCATAGTTAGAACACTTGTGAGGCAGTCCCTTCTTGCTCAACTTGATATTATCTTGCACATTTTCTCCAACTAACAGCTTTCTCTTCACAATGGGTCGATTCTGCAACTTCTTACATCCCGGTGCTTCGATGGGTTCGTACATGGATGTTGGCCACTGTTGAGGACCATTGAGAGGCTCTAAAGGAAACAAATAAGCTTTCAGATATGTTTCCTTTGAATACCAGTGGGAAACATAATGTTCGGGATGTTCCATCGCTTTCCATATTGTTGTAACAGCATGGTTGCAAGGCACACCACTTAGTTGCCAAGCATTGCAACTGCATGTTCTATCAAGTAAGCTAACAACATACCGAACTTGAGTTCAGTTCAGTTCAGTTCAGTTCAGTTCAGCTCTAAAGAACATGGCCTAAAGATATGCTACATGGTACGAGGCTCTGCCTCTCCTTTTGCAGAAAAGATCAACTACCACCTAAAACCTACTGATGCTTCACGAAGGGTCACATACTGACATACACTCCGCTCTTTCAAAGGAGTAAGTCAACAAATTATTCGTAGGAAGAAAAGAAGCATAAAGCCACTTTTTTTTAGTAAATTTGTAAACTTCTTTGTTCAAGGATCAATTTGCCAGTACTATTTGGGCATAATGTCATTACTGTGTTCTGCAAGTCATGCATTATAAGTCAAATTGAGTCCCTGCAGACCAGTGGGCACTGCCTCATTATAACATCATTTTTTGAGAGGCTAATTAGATAATCGGCAACGAAAGATTTACATAATAATGACTGGTGTATTTCATTAATCATCATCAAAGTACAAGCTAATGTTTTCGAAAGTCAAACCTATGACATTGTGTCACAAATGACCTTCACAATGTCACCCAAACTTTGACATCCAAAACACCTACCTGCTACAACTACCTACCAACAACTACAACTAACTGCTGCAACTACAAGCTTACCCCTAACTGCAGCAACTACAACTACAAGTTTACAACTACCCGTTGCACTACAATCTCACAACTAACTGTTGCACTACAATCTCACAACTAACTGCTGCACAATATATTCCATCAAAAAAACTACTGCAGCCTAAATCAATCCATCAAAGACTAAGTATCAAGGCTGTTGCTGCTACCAAAAATCAATCCAACTACCAACTACAACCTACTGCTGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAACCAAAAATGGTATTCAGTTTTCAAATATGGTATTCTTTAATACACTTTGAAATGTTATGTTTGATATAAGGATTATTATCATAATCCACTAACAATATAGAAATTGTAATTGGAATTAATAACTTTAATTGAATCCTAAACCAAATTTTACACCATGTTCTACACCCTAAAAACTAAATTTTACACCCTAAAAACTAAACCTAAACACCCTAAACCCTAACCCTAAAGCCTAACCCTAAACCCTAAACCCTAACCCTATCGAGTGATTAACCATGATTCTTATGTCGAATCATAAATCAAATCATTGAATCAAATCATTAACCATATTTGATTGATTAAACTATGATTTCTAAGTCATTAACCATGTTCGATTGACTAACCATGATTCTTAAGTCGAATCATATATCGAATCATCAAATCGAATCATTAGAATGATTAACCCATCCAAGATTCTTAAGCCGAATCATAAATCAAATCATCATCCTTATTCGAATGATTAACCATGAATCTTATGTCGAATCATAAATCGAATCGTTAAATCGTATCGTTAAATCGAATCATCAATAACTATTAACCCTAGTTCATGGAATCGAATCGTCATTAATCAACCTTATTAATTTGAATCATTAACTTCAATTCATCGTAGAACCGAAACATGAATCATAATTCATCCTATGATTCAAATTATTTAACTCTTAATTATAATTATTAACCCTAAATTCAAAATTAACCATATTTCACTCTTAACCATTTTCCAAAATGGTATTTAAATAGATAAAAATGGTATTATTTTATGAAAAATGATATTCATTATTTTATAAAGGAAGCAAATTATGAAAAATGGTATTTAATATTCTAAACTGATACTAGTGTTCGAAAATGGTATTAAATTACCATTAAAATGGTTTTCGTTTTTCATAAATGGTACTCTTTAATTCACTTTGAAAAATTATCATTTGAAAAATCATGTTTATTTATTATCTTGAGAAGTGTTAGATTAATTTTTGTAACAATTGAAGAATTCGAAAATTCATGTTTTGGTCTAAGTAGTTCTTGATCATTAAGTGTACTTAGAATTGAGTCCAAACGAAACGAAACGAAACAAATCGTAACATTGAATCAACATAAATCGAACCCTAAATCGAATGATCACTTCAATTAGAATCATTATTAACCATGATTCGTAAGTCGAATGAGTAACCATAATATAGATCAAAACACTTGTAATTGGAACGAATAACCTAAATTGAACCCTAAAACCATAAAAATTCCAATGACTAACTTAGAACCCTAAACCCTTTGTCTAATGACCTAAACCCTAAACCCTAATCCTAATGAGTCGAATCTTATGTCGAATCATTGAAACGAATCATTATCCTTATTCGAATGATTAACCATGAATCATAAATTGAATCATTAAATCGAATCTTTAAATCGAATCATCATTAACCATACACCCTAGTTCATTGTGGAATCGATTCGTGAATCGTTCACCTTATGTCACTTTTAATTTGAATCATTAACTCCAATTCATCGTAGAATCGAATCATGAATCATAATTCATCCTATGATCGAATCATTAACCATTATGTTACTCTTAATTATAATTATTAACCCTTAGTTCACTCTAAATACAAATTATTAACCATATTCCTCCATTTATATTTACCGTTTTCCAAAATGGTATTCAAATTGTTAAAAATGGTTTTAATATTCCAAATATGGTATTTTAGTTTCCGGAATGGTATTCAGAGTAATCTAAAATGGTATCATATTTCAAAAATGGTAGAAATGTATAGTTTTCTTTTTACATAAATGATACTCATTTACCCAAAAATGATACTCATTTACCCAAAAATGATATTCATTGTTTAAAATTCATCATCATTTGGAAAAGTCACTTTTGTTTACATTGATTTTTTTTAATGAGAAATTTGAAAAGCCTAACCCTAAACCCTAAAGCCTAAAGCCTAATGCATAAGTCAAATCATAAATCGAATCATTATCCTAATTCGAATGATTAACCATGAATCTTATGTCGAATCATAAATCGAATCGTTAAATCGTATCGTTACATCGAATCATCAATAATCATTAACCCTAGTTCATTGTGGATCATCATTAACCATCCTCACTAGTTCATTGTGGAATCGAATCGTGAATCATTCACCTTATTTCACTCTCAATTTAAATCATTAACTCCAATTCATGAATCATTTACCTTAGTTCATTGTGGATCGAATCATGAATCATAATTCATCTAACCATTATTTACTCTTAATTATAATTATTAACCCTAAGTTCACTCTAAATACAAATTATTAACCATATTTTACTCTTATTTTCCAAAATTGATAAAAATAGTTTTATTATTAGAAAAATGGTATTGGTATTACAAAAATGGTACTAAACTTTTTCTAAATGAAATTCATTTTCCTTAAATGGTACTCGTTTTGTACTAAATTTTATAAAGTGGTATTAATATCACAAAAATGGTGCTAAATATTTTAAAATGATATTCATATTACAAAATTGGTACTCAATTTTTCTATATGGTATTCATTTTAATGATTATTGATGGCACGTTGGCAAACACACCTCAGTAACGGGATCCAAGTTGGCAAACGGGGTTGACTATTCAACAATTTCAAAATGGCTGGGAAATTACAAACAAGCCCATGGCATGTATTTCATAATACATGCCTGGCTGCGATTTTGACGCCCTCGCACTAGAACGATACGTTTTAGGTGGCATTATGTGAATTTTTTTTTTGCACGCCTTTGTGGGCCCACTATACTCAGAGCCGGTGAGTGTTTCTCCTCAAGTTGCGAGTATTTTCCTATTTGCTCGTGAGTTGGTAATTTGTACTCCCTCCGTCCCTTAATACTCGCACCGTTTTGACTGGACACGCTTGTCAATGCACAACTTTGACCACTAACATCTTTAACTACATATTATAAAAACTTATAAAATATTAATATTTTGAAAATATATATTAAGATGAAGCCAACAATATATTCTATACTAACATTTGTTTTCATATACTTCCTCCGTTCCGGAAATATCGCACCATGGTTGACTTTTACTCTTTGAATCATTACTTTGACTCTTTATATCTCAAATAGTGTGCAAGTAAAAAATTATAAAAAATTAATATTTAGAAAATATATATCGATACGAATCTAAGATGACCCCACATGACTAAAATTTCATTATGTACGAATCACAAAAATTGCCAAAGTCGTAGTGTGAATAGTGTAAAAAACAAATGGTGTGATATTTCCGGAACGGAGGAAGTATTAGAAATAAAATAGGGTCAAAGTGAATTATGTGAATAGTGCAAAAAGTCAAAACGGTGCGAGTATTAAGGGACAGAGGGAATAGCATTGAAGGGACTAGTCTTGGCAAAGTCATAAATCAAGTTTCGAAAAATCAAGGCTCGACCTAAGATTCAATGTGTGAGTTAAGTAAAGGCATAAAATGTGTGGTATATTAATTGAGATGTCTTAAATGAGTCTTAACAAATCTATATTATCTACTCCGTATTCCCTCCGTCCCTTAATACTTGCACCGCTTCTATAAATGAGAAATTTTTACTTATATCATATTATTTCTCACTCTTACCTACTAACCCACCTACACCCATACCCCCTACAAAAAATCATTTGAAAATTCACATTCCCAACTCCCCATTCCCCACCCCTACACATTTACCACTAACTATATTAAAAAAAATACCCCACTATTAAAAGGCGCTGCGAAGAAATACAATAAGGTTCGAATATAAGACCTCAAGTTTGGAGAATATTCTCATTACTATCTTAACCAAACACTAATTGTTATTTATCCATACACATCTATCCATCTATACTATATATTAAAAGGCGTTTATAAGAAAGCTTACATGACACGTGGCACTCAGCTTATGAGTCGCCGTTCGCATCATGTAATCTTCATATACATAAAAATGTCAAACATGTTTTGCGTAAGGTTTGAACCCTTGACCTTGAGTTTAAACATCAAAGCTTTTACCACTAAACTATTAGATGTTGATGTTACCATTGCAAAAGAAAAATATATAAGTAAATGTAAATGTCATTAATGTACTAACCCGGGGCATCGCCCGGGCCCAAAAACTAGTTAATTTATAAATACATGTTAACATGACATCTAAATAACTAAATTGTTATGTTAACCTTTATTTCTTATAGACTATATATATTGAAATAAAAATACTTCATCCGTTCCGGAAATATCGCACCATTTATTTTTTACACTATTCACACTACGACTTTGACCATTTTTCGTGATTCGTACGTAAGAAAATTTTAGTCATGTGGGGTCATGTTAGATTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATAATTTTTTTTTATAATCTTCACTTGCACAAGATTTGAGATATTAAGAGTCAAAGTTATGGTTAGAGGAGTAAAAGTCAACCATGGTGCGATATTTCCGGAACGAATGAAGTAAAATTAAAGCATTAGCAAAACCATGAATTAAACATGATATCACAAGTCTCATAAGCATCAATTATAAAAATGCATTGCATATATCTAGTTTGGTGTTTACTAATTTGAAGTACTTAGTTCTATTAGAAAATAAATTAAATGAATTGAAATAAAATCTAATTGAAAAATTACTTAGTGTACATGTGTAGTTGATGAACTTAGTGAATTTTTTTTACTTTTATGAAATATATGTATTTTGATCAAATATTGAGCTTGAAGAAAAATTTCGAATTTTAATCATTCAAAGTAGCACCGGTGCATTGCCCGGGACACACAATAGTCTATACTAATAATTAAAAAGCATTGTGAAAAAACGTATACGTGTCATGTAGTACTCTCCCCTTTACGCCACATCATCCACTCTCACAAAGTGTTATGTGCCACATCATCCACTCTCACCAAGGGTTATGTCATGGCATAGGCAACGAAAATCAATACAATGAAGTTCGAACACATGACCTAAAGTGTAGATGACCTCTCATTACCATCTTAACCAACCACCAATTATGATTTATCTCTTCACAACATTATAAATAAATGTTAACATGAATTCTAAACAACTAATTTTTTATGCGACTTTTTATTTTGTATTGAGTATTTTGGAAAAATAATAATAATTAAAAATTAGGACAACCATGAAAAAACATGATGTCATAAGTCTCATAAACATCAAACACTTTGCATAGCTGTATATAGATAAACATCAAACAATCGGGATATGGTGAGAACCACCCTTTAGAACTGAGAACTAATCTCAGTCGTCGATCAATTTAATCCAACGACCCTTATCTCGCCCGACCAAATAAAAAAATAAGGGTAATACGGTAACTTTCCATGCCTTGAATTACCTCCCCATTTCTTCCAGATTTACTTTCTCTCTCTTCCTTCCGTTTTCTCTTTTCTCGTCTAAATCCTCTGCGATTTTCAGTCTGCTATTTTCTCCTTCTTTTTCTTTCTTCTTCCATTTTTGCACTCAAATTCGTCTCTTCCTCTCCACTATGGCACTCGAAGTCTTCGATCTTTCTCCAGTGCTTACTCGCCTAGTATTTTCTAAGATTTACAATTGAGGTACGTGTTTTGATTGTTGAATTTGGATTTTTAGGGTTTCAATTGAGTTTTTGTGTGTTTTATATGTTCGAATTAGGGTATTCTTTTTTCAGATACTCAATTTAATATGATTTGTTTTTAATTTGCTTGAACAATTTATTCAAATGGTTCTAGCAAGTTGATTAGGGTTTTTTTTATAAGTTTGTTGATTGTGCTATTTTTCGAATTAGAGTAGTTGCAGCTCGAACAAAAGTTATGGCTGGTAAAGATAAATGATTTGTTTTTTTTATTTTTCGATTTCATATTGATCTTTACTAATTTGAACTTAAATTATAACTTCATTTTGGTATGATTTGCTGAATATTTGCAGAACTAATTTTGAGAGAAGTAGCACAATTGTCTATTAAATGAATTACACTAGTGTACTACGTAGTTTAATTTGGTTTAAGTTGAATTTTGCTTTGTGCTTCAATGATGTTGTTAGTGTTTGTTACTTCTTTTACATGTATTTTATTTGATTGTGTGCAGGGCAAGTTGAAGAATGTAAGAGCTTTTTTAATACACTGTACAGATTCGTATACCTCATGGGAACTTATGTAAAGCCTGATGTAAGTATTTTTCTTTATTAATGTGCCTAGTTCTTGTGAACATTCTTGGTACTTTTTGGAAGCTGTTTAATTTGCCTAGGATTTTTTTGGTCTTTAATGTCTGAATGATTGCCTTGAAATTCCTGATTTTGTTTTGTGTCGGCAAAGTTGTGGAGTTGTGATTGAAGCCTCGATGTTCATCCTATGCAAATGTATCAATTCTATATGGAATTGTAGATTACGGTTGAATAATTTGATGGTGTAATTGATCTTGGAATATGATGCATGTATGACCCCTTCCACATCTTACCCCATATAGTTTTCCAACCTTTTATTAGGTGGGGGCTTACTGTGTGCCAAATGGAGGTCCAAATCTTCTGTTTTAGTTTATAAAATCCTTGAAAGATTAGTTATTTAGGTTCCATATTACTTTGCAAATGGTATTGATGTATGCAGTTCCTGTAATTGGTTGATATGAAGGATTAAATTGATTCGCACACAGAGACAAGCACTAGTGTTTCGGCTATATGCAGTTCTTATTTTCTATGGATTTTTGCTGATTTTTATTGAACATTTTTTATAAAGTTGAGGAAAACTTGGCCTAACAAAACTTTAATCTGAATTACTGTCCAGGTGCAATTGGTTCCTTACATGCCTGATGTTTTGGACGCATCCATCCTGTGGACGGAGAACAAGGACTTAGGTGTTGGATTTAGAACTATCAAGATGGTCAACAATGTTCACCATCAAATTATTCTGACCCACTGAACTGGAATCTGTTAGCAGGACTCCATAAATTATATCTGCTATGTTTTTCATCGAATGGTAACAATCTCTTTGCTTTTTTTTAAGAGTAAGACTAAGTGCCTCTAAACCAAATCATTTAATAATTGTGACCGTGAGAGTCACAACATGTACACTGCATGTTGGCCAAATTTGACCGTTGTTAGATTCTTGGCGAGCTTTTGTTCTTTGCTCGGTTTAGTGCTTCATTTGCCAAACTTTTGAAAATTTTCTAATTTACTTTTGAGATTTTCTAATTTACTTTTGAGATTATTTGAATTACTTTTGAATATTTTCATTTACTTGTATCAAACTTACATGATATTACTAGAGAATGTAGTTCATATCGAAAATTTGAATCACATACACAAAGATACTAGTTCTAACTCTAACAAAACAATAAGACCATCTTACACAGCAGGTAAATAACCAAACTATAACTAATTTTCTATTTTCATTTACTTTGTGTATTGTTTTATTTACTTATAATATGAAACTGTTTACTTTGACATCCGCACATATACTTCTAAGTATCAAAAGCACATAAGGTATCCTAGAATGAGGTCATGATAAAATATGGAAAGCACATAAAGCATCCCATACCCTATATCTGTATTATGATTCTGGATGTTTTACTTCAACTTTCCTGATTAATGATTGTTTACTTTTAAATCGATTCTATTTACTTATATGATTTATTTATCTACTTTAAAATTGAACAAAAGGAAAAATGTGTGATTGCATTATAATTATTCCTACCCTATGGTTAATTGGATAACACTAGCCTACTAGCTCAATAGGAAGAGCATTGTGCATTTGCGCAAAAGATGTGGGTTCGAATCCCACGTAGGTTCATCTTTTGTAAGTGTTGGGTAACAACAGGTTTGATATCAAGAGAGGGACTTGCATAACATGAAAGCCACAAGGATGGCAACTACTGAAGTTCCTCCATGGTAAGGTATGTTGAAAATTATGAGGCTTTTTATCAATTACCTTCTCCATGCGGAGTCGCCTTGATCGAGTAAATTTTTTACTTATTTGTCTACATTCGATTCAAGACTTGTTCTTTTGTCACAACTGTACACAACAATGCAACATACAAGCACTCGGAAACCGCTTCACTGAATCCAGGCCAGAAGGCTGCAACATCAGTAGACCTAAACCCAACCACAACAGGAGCACGAAAAGACAACTAA

mRNA sequence

ATGGGAGAAGCATTTTTGCAGGTCGATCTCTCTCTCGGAAGTATCGACCACTATTTCACTCTCCTTCTTCAAGCTGATGAAGAGGAAGAAGACGAAGAAGTGAGAGCAGAGAAGAAAGTCGGCAAGTTGAAGAATGTGCAATTGGTTCCTTACATGCCTGATGTTTTGGACGCATCCATCCTGTGGACGGAGAACAAGGACTTAGGTGTTGGATTTAGAACTATCAAGATGACTTGTTCTTTTGTCACAACTGTACACAACAATGCAACATACAAGCACTCGGAAACCGCTTCACTGAATCCAGGCCAGAAGGCTGCAACATCAGTAGACCTAAACCCAACCACAACAGGAGCACGAAAAGACAACTAA

Coding sequence (CDS)

ATGGGAGAAGCATTTTTGCAGGTCGATCTCTCTCTCGGAAGTATCGACCACTATTTCACTCTCCTTCTTCAAGCTGATGAAGAGGAAGAAGACGAAGAAGTGAGAGCAGAGAAGAAAGTCGGCAAGTTGAAGAATGTGCAATTGGTTCCTTACATGCCTGATGTTTTGGACGCATCCATCCTGTGGACGGAGAACAAGGACTTAGGTGTTGGATTTAGAACTATCAAGATGACTTGTTCTTTTGTCACAACTGTACACAACAATGCAACATACAAGCACTCGGAAACCGCTTCACTGAATCCAGGCCAGAAGGCTGCAACATCAGTAGACCTAAACCCAACCACAACAGGAGCACGAAAAGACAACTAA

Protein sequence

MGEAFLQVDLSLGSIDHYFTLLLQADEEEEDEEVRAEKKVGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETASLNPGQKAATSVDLNPTTTGARKDN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17974.1	Spo17974.1	mRNA

Homology

[Close]

BLAST of Spo17974.1 vs. NCBI nr
Match: gi|902227549|gb|KNA20740.1| (hypothetical protein SOVF_049540 [Spinacia oleracea])

HSP 1 Score: 63.5 bits (153), Expect = 2.900e-7
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1

		  
Query: 46  VQLVPYMPDVLDASILWTENKDLGVGFRTIKM 78
           VQLVPY PDVLDASILWTE+KDLG GFRTI+M
Sbjct: 273 VQLVPYKPDVLDASILWTESKDLGAGFRTIRM 304

[Close]

BLAST of Spo17974.1 vs. NCBI nr
Match: gi|118487292|gb|ABK95474.1| (unknown [Populus trichocarpa])

HSP 1 Score: 59.7 bits (143), Expect = 4.100e-6
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G+   VQL+PY PDVLD SILWT++KDLG GFR ++M    V   H N    H +  S
Sbjct: 263 IGEANPVQLIPYNPDVLDQSILWTQSKDLGDGFRAVRM----VNNTHLNVDAFHGDKKS 317

[Close]

BLAST of Spo17974.1 vs. NCBI nr
Match: gi|566231097|ref|XP_002325401.2| (hypothetical protein POPTR_0019s04700g [Populus trichocarpa])

HSP 1 Score: 59.7 bits (143), Expect = 4.100e-6
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G+   VQL+PY PDVLD SILWT++KDLG GFR ++M    V   H N    H +  S
Sbjct: 243 IGEANPVQLIPYNPDVLDQSILWTQSKDLGDGFRAVRM----VNNTHLNVDAFHGDKKS 297

[Close]

BLAST of Spo17974.1 vs. NCBI nr
Match: gi|1009170930|ref|XP_015866465.1| (PREDICTED: bromodomain-containing protein 4-like [Ziziphus jujuba])

HSP 1 Score: 59.3 bits (142), Expect = 5.400e-6
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G    VQL+PY+PDV D SILWTE+KDLG GFRTI+M    V  +  N    H +  S
Sbjct: 226 IGASHPVQLIPYVPDVFDESILWTESKDLGDGFRTIRM----VNNIRLNVDAFHGDKKS 280

[Close]

BLAST of Spo17974.1 vs. NCBI nr
Match: gi|720005715|ref|XP_010257743.1| (PREDICTED: uncharacterized protein LOC104597722 [Nelumbo nucifera])

HSP 1 Score: 59.3 bits (142), Expect = 5.400e-6
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKM 78
           +G    VQLVPY PDVLD SILWTE+KDLG GFR I+M
Sbjct: 246 IGATHPVQLVPYNPDVLDQSILWTESKDLGDGFRCIRM 283

[Close]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_049540 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.000e-7
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1

		  
Query: 46  VQLVPYMPDVLDASILWTENKDLGVGFRTIKM 78
           VQLVPY PDVLDASILWTE+KDLG GFRTI+M
Sbjct: 273 VQLVPYKPDVLDASILWTESKDLGAGFRTIRM 304

[Close]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Match: A9PGH1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.900e-6
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G+   VQL+PY PDVLD SILWT++KDLG GFR ++M    V   H N    H +  S
Sbjct: 263 IGEANPVQLIPYNPDVLDQSILWTQSKDLGDGFRAVRM----VNNTHLNVDAFHGDKKS 317

[Close]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Match: B9IPL9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s04700g PE=4 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 2.900e-6
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G+   VQL+PY PDVLD SILWT++KDLG GFR ++M    V   H N    H +  S
Sbjct: 243 IGEANPVQLIPYNPDVLDQSILWTQSKDLGDGFRAVRM----VNNTHLNVDAFHGDKKS 297

[Close]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Match: A0A067J961_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06868 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.800e-6
Identity = 30/59 (50.85%), Postives = 36/59 (61.02%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
           +G    VQLVPY PDVLD SILWTE +DLG GFR ++M    V  +H N    H +  S
Sbjct: 222 IGDTHPVQLVPYNPDVLDESILWTEGRDLGDGFRAVRM----VNNIHLNVDAFHGDKHS 276

[Close]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Match: U5FWK1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0013s05100g PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.400e-6
Identity = 30/56 (53.57%), Postives = 35/56 (62.50%), Query Frame = 1

		  
Query: 43 LKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETAS 99
          L  VQL+PY PDVLD SILWTE+KDLG GFR ++M    V   H N    H +  S
Sbjct: 35 LFKVQLIPYNPDVLDESILWTESKDLGDGFRAVRM----VNNTHLNVDAFHGDKKS 86

[Close]

BLAST of Spo17974.1 vs. TAIR (Arabidopsis)
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.200e-7
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 1

		  
Query: 40  VGKLKNVQLVPYMPDVLDASILWTENKDLGVGFRTIKMTCSFVTTVHNNATYKHSETASL 99
           VG    V L+ Y+PD LD S+LWTE+KD G G+RTI+M  +  T ++ +A +  S++  +
Sbjct: 236 VGATHPVHLIRYVPDKLDESVLWTESKDFGDGYRTIRMVNN--TRLNVDAYHGDSKSGGV 295

Query: 100 NPG 103
             G
Sbjct: 296 RDG 296

The following BLAST results are available for this feature:

BLAST of Spo17974.1 vs. NCBI nr
BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
BLAST of Spo17974.1 vs. ExPASy Swiss-Prot
BLAST of Spo17974.1 vs. TAIR (Arabidopsis)

BLAST of Spo17974.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902227549\|gb\|KNA20740.1\|	2.9e-7	87.5	hypothetical protein SOVF_0495...	[more]
gi\|118487292\|gb\|ABK95474.1\|	4.1e-6	49.1	unknown [Populus trichocarpa]	[more]
gi\|566231097\|ref\|XP_002325401.2\|	4.1e-6	49.1	hypothetical protein POPTR_001...	[more]
gi\|1009170930\|ref\|XP_015866465.1\|	5.4e-6	50.8	PREDICTED: bromodomain-contain...	[more]
gi\|720005715\|ref\|XP_010257743.1\|	5.4e-6	71.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17974.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RMJ3_SPIOL	2.0e-7	87.5	Uncharacterized protein OS=Spi...	[more]
A9PGH1_POPTR	2.9e-6	49.1	Putative uncharacterized prote...	[more]
B9IPL9_POPTR	2.9e-6	49.1	Uncharacterized protein OS=Pop...	[more]
A0A067J961_JATCU	3.8e-6	50.8	Uncharacterized protein OS=Jat...	[more]
U5FWK1_POPTR	6.4e-6	53.5	Uncharacterized protein (Fragm...	[more]

BLAST of Spo17974.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo17974.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT2G39050.1	5.2e-7	41.2	hydroxyproline-rich glycoprote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31257	FAMILY NOT NAMED	coord: 40..77 score: 6.5
None	No IPR available	PANTHER	PTHR31257:SF2	SUBFAMILY NOT NAMED	coord: 40..77 score: 6.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26763	0.67	Barchart \| Table
Spo04037	0.66	Barchart \| Table