Spo08278 (gene) | SpinachBase

Overview


Name	Spo08278
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	SpoScf_00895 : 101941 .. 103341 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAACCATCAAATCCAGATTACGGAAGCATTTCATGCTTCTTACGCGGCTGCGTAGACCCCCCTCCTTATTGTTTCACCACCTGCTACAACTCATTCATCCCCATTTCACCGCCGCCGCCGCCGCCGCCACCACCACCTCCACCGAATCAGATCGCCCCATTCTTAATCGCCACCGTTTGCATCCTCGGAATCTCCTTCCTCCTCCTCTCTACTTGCACCATCATTTTACGGCTCCGCTTCACCAGCCGCCGTAGAGGGGTTTCTCGTGGGAGTACCAACGTTTCTCCGACGATCAACGATGACGAAAACGGTAGTGGGTCCGTGGTGGACCACCCTATTTGGCATATCACTACAATTGGGCTTCAACAATCGGTAATTGATTCCATAACTGCGTTTAAGTATAAAAAAATTGATGGGTTTTTCGTTGAGGGTAGTGATTTATCTTGTTCAGTTTGTTTGACTGATTTTGAGGAAGGGGATGATCTTAGGTTATTGCCAAAGTGTAGTCATGCTTTTCATGTTTCTTGTATTGATACTTGGTTGAAATCGCATAAGAATTGCCCCCTTTGTCGCGCTCCTATTGTGAATGAGATTGTTAGGGATAATAATAATAATAATAATTCGGGTATTCCCAGGTTGAATTTGACTACTAGTGTTTCTGGTTCATGGGAGGAATCAGTGAGATTGAATTTGGATGATAATTTCTTGGCTGGAGAGGGTAGCAGTTCAAGGAGATTCCCCATTTTAGAGAGTTTAAGGATAGCTGAGCTTATGAAGAAGAATCGAGACCTTCGAATTTTTAGTGATTTGGGTGAGAATCACCGGTTTCAAAGGGTTGAGGATGCTTTGGAACCGGTTAGAAGGTCCATTTCATTCAATAATGTTGCTTTGGAACCGGTTAGAAGTTCAATTTCATTCAATAATGAGGCTTTGGAACCGGTTAGAAGGTCAATTTCATTCAACAATGGAGGGACTTTGAGCTCTAGTGATAGGATTCCCAATGATAGGTGTCCTAATAATGAAGGGAGCTCTAATGGTAGGTGTCCTAATAATGAAGGGTACCCTAGTGATAGGAGTCCTAATAATGAAGGGAGCTCTAATGGTGGGTGTCCTAATAATGAAGGGTACTCTAGTGATAGGAGTTCAAAGGAAGAGTGTTCTGTAGAAGGGGATTCAGAGGTTGTTTTGCAGGAAAAGAAACATAATTCAGAGAAAGGGTGTAATAATAAGAGGGGAACGAGTATGTCTGGTTTATCGATCAAGAGTCCTTCCGTTGTTGATCCTTCGTTGCAGCAAAAGGGTCCTGTTTCGATGAAGAGATCATTATCTTCTTCAAGTAGCAGGTTCTTTTCATTTCGCAGGACGAAAAGCACGGCCTCAATTCTTCCATTGTGA

mRNA sequence

ATGGCAGAACCATCAAATCCAGATTACGGAAGCATTTCATGCTTCTTACGCGGCTGCGTAGACCCCCCTCCTTATTGTTTCACCACCTGCTACAACTCATTCATCCCCATTTCACCGCCGCCGCCGCCGCCGCCACCACCACCTCCACCGAATCAGATCGCCCCATTCTTAATCGCCACCGTTTGCATCCTCGGAATCTCCTTCCTCCTCCTCTCTACTTGCACCATCATTTTACGGCTCCGCTTCACCAGCCGCCGTAGAGGGGTTTCTCGTGGGAGTACCAACGTTTCTCCGACGATCAACGATGACGAAAACGGTAGTGGGTCCGTGGTGGACCACCCTATTTGGCATATCACTACAATTGGGCTTCAACAATCGGTAATTGATTCCATAACTGCGTTTAAGTATAAAAAAATTGATGGGTTTTTCGTTGAGGGTAGTGATTTATCTTGTTCAGTTTGTTTGACTGATTTTGAGGAAGGGGATGATCTTAGGTTATTGCCAAAGTGTAGTCATGCTTTTCATGTTTCTTGTATTGATACTTGGTTGAAATCGCATAAGAATTGCCCCCTTTGTCGCGCTCCTATTGTGAATGAGATTGTTAGGGATAATAATAATAATAATAATTCGGGTATTCCCAGGTTGAATTTGACTACTAGTGTTTCTGGTTCATGGGAGGAATCAGTGAGATTGAATTTGGATGATAATTTCTTGGCTGGAGAGGGTAGCAGTTCAAGGAGATTCCCCATTTTAGAGAGTTTAAGGATAGCTGAGCTTATGAAGAAGAATCGAGACCTTCGAATTTTTAGTGATTTGGGTGAGAATCACCGGTTTCAAAGGGTTGAGGATGCTTTGGAACCGGTTAGAAGGTCCATTTCATTCAATAATGTTGCTTTGGAACCGGTTAGAAGTTCAATTTCATTCAATAATGAGGCTTTGGAACCGGTTAGAAGGTCAATTTCATTCAACAATGGAGGGACTTTGAGCTCTAGTGATAGGATTCCCAATGATAGGTGTCCTAATAATGAAGGGAGCTCTAATGGTAGGTGTCCTAATAATGAAGGGTACCCTAGTGATAGGAGTCCTAATAATGAAGGGAGCTCTAATGGTGGGTGTCCTAATAATGAAGGGTACTCTAGTGATAGGAGTTCAAAGGAAGAGTGTTCTGTAGAAGGGGATTCAGAGGTTGTTTTGCAGGAAAAGAAACATAATTCAGAGAAAGGGTGTAATAATAAGAGGGGAACGAGTATGTCTGGTTTATCGATCAAGAGTCCTTCCGTTGTTGATCCTTCGTTGCAGCAAAAGGGTCCTGTTTCGATGAAGAGATCATTATCTTCTTCAAGTAGCAGGTTCTTTTCATTTCGCAGGACGAAAAGCACGGCCTCAATTCTTCCATTGTGA

Coding sequence (CDS)

ATGGCAGAACCATCAAATCCAGATTACGGAAGCATTTCATGCTTCTTACGCGGCTGCGTAGACCCCCCTCCTTATTGTTTCACCACCTGCTACAACTCATTCATCCCCATTTCACCGCCGCCGCCGCCGCCGCCACCACCACCTCCACCGAATCAGATCGCCCCATTCTTAATCGCCACCGTTTGCATCCTCGGAATCTCCTTCCTCCTCCTCTCTACTTGCACCATCATTTTACGGCTCCGCTTCACCAGCCGCCGTAGAGGGGTTTCTCGTGGGAGTACCAACGTTTCTCCGACGATCAACGATGACGAAAACGGTAGTGGGTCCGTGGTGGACCACCCTATTTGGCATATCACTACAATTGGGCTTCAACAATCGGTAATTGATTCCATAACTGCGTTTAAGTATAAAAAAATTGATGGGTTTTTCGTTGAGGGTAGTGATTTATCTTGTTCAGTTTGTTTGACTGATTTTGAGGAAGGGGATGATCTTAGGTTATTGCCAAAGTGTAGTCATGCTTTTCATGTTTCTTGTATTGATACTTGGTTGAAATCGCATAAGAATTGCCCCCTTTGTCGCGCTCCTATTGTGAATGAGATTGTTAGGGATAATAATAATAATAATAATTCGGGTATTCCCAGGTTGAATTTGACTACTAGTGTTTCTGGTTCATGGGAGGAATCAGTGAGATTGAATTTGGATGATAATTTCTTGGCTGGAGAGGGTAGCAGTTCAAGGAGATTCCCCATTTTAGAGAGTTTAAGGATAGCTGAGCTTATGAAGAAGAATCGAGACCTTCGAATTTTTAGTGATTTGGGTGAGAATCACCGGTTTCAAAGGGTTGAGGATGCTTTGGAACCGGTTAGAAGGTCCATTTCATTCAATAATGTTGCTTTGGAACCGGTTAGAAGTTCAATTTCATTCAATAATGAGGCTTTGGAACCGGTTAGAAGGTCAATTTCATTCAACAATGGAGGGACTTTGAGCTCTAGTGATAGGATTCCCAATGATAGGTGTCCTAATAATGAAGGGAGCTCTAATGGTAGGTGTCCTAATAATGAAGGGTACCCTAGTGATAGGAGTCCTAATAATGAAGGGAGCTCTAATGGTGGGTGTCCTAATAATGAAGGGTACTCTAGTGATAGGAGTTCAAAGGAAGAGTGTTCTGTAGAAGGGGATTCAGAGGTTGTTTTGCAGGAAAAGAAACATAATTCAGAGAAAGGGTGTAATAATAAGAGGGGAACGAGTATGTCTGGTTTATCGATCAAGAGTCCTTCCGTTGTTGATCCTTCGTTGCAGCAAAAGGGTCCTGTTTCGATGAAGAGATCATTATCTTCTTCAAGTAGCAGGTTCTTTTCATTTCGCAGGACGAAAAGCACGGCCTCAATTCTTCCATTGTGA

Protein sequence

MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALEPVRSSISFNNEALEPVRRSISFNNGGTLSSSDRIPNDRCPNNEGSSNGRCPNNEGYPSDRSPNNEGSSNGGCPNNEGYSSDRSSKEECSVEGDSEVVLQEKKHNSEKGCNNKRGTSMSGLSIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo08278.1	Spo08278.1	mRNA

Homology

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BLAST of Spo08278.1 vs. NCBI nr
Match: gi|902145919|gb|KNA05013.1| (hypothetical protein SOVF_194380 [Spinacia oleracea])

HSP 1 Score: 755.7 bits (1950), Expect = 4.600e-215
Identity = 404/466 (86.70%), Postives = 410/466 (87.98%), Query Frame = 1

		  
Query: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT 60
           MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT
Sbjct: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT 60

Query: 61  VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT 120
           VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT
Sbjct: 61  VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT 120

Query: 121 IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID 180
           IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID
Sbjct: 121 IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID 180

Query: 181 TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG 240
           TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG
Sbjct: 181 TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG 240

Query: 241 EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE 300
           EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE
Sbjct: 241 EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE 300

Query: 301 PVRSSISFNNEALEPVRRSISFNNGGTLSSSDRIPNDRCPNNEGSSNGRCPNNEGYPSDR 360
                         PVR SISFNN     + + +      NN G+               
Sbjct: 301 --------------PVRSSISFNN----EALEPVRRSISFNNGGTL-------------- 360

Query: 361 SPNNEGSSNGGCPNNEGYSSDRSSKEECSVEGDSEVVLQEKKHNSEKGCNNKRGTSMSGL 420
                 SS+   PN+  YSSDRSSKEECSVEGDSEVVLQEKKHNSEKG NNKRGTSMSGL
Sbjct: 361 ------SSSDRIPNDRWYSSDRSSKEECSVEGDSEVVLQEKKHNSEKGGNNKRGTSMSGL 420

Query: 421 SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL 467
           SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL
Sbjct: 421 SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL 428

[Close]

BLAST of Spo08278.1 vs. NCBI nr
Match: gi|731339752|ref|XP_010681026.1| (PREDICTED: RING-H2 finger protein ATL52-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 327.4 bits (838), Expect = 4.100e-86
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 1

		  
Query: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSF-----IPISPPPPPPPPPPPPNQ--I 60
           MAE   P  G+  CF         +  TTC+N+       P+ PPPPPP PPP  +Q  +
Sbjct: 1   MAETPTPSNGAFPCF---------FGTTTCFNADGDDYPFPLLPPPPPPSPPPQSSQTHM 60

Query: 61  APFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDH 120
           APFLIAT+CILGISFLLLSTCT+ILRLRFT RRR VS      SP +ND+++     VDH
Sbjct: 61  APFLIATICILGISFLLLSTCTVILRLRFTGRRRVVSPEIPEGSP-MNDEDS---VFVDH 120

Query: 121 PIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHA 180
           PIWHITT+GL QSVIDSITAFKYKKIDGFF +GSD SCSVCLT+FEEGDDLRLLPKCSHA
Sbjct: 121 PIWHITTVGLHQSVIDSITAFKYKKIDGFFFDGSDSSCSVCLTEFEEGDDLRLLPKCSHA 180

Query: 181 FHVSCIDTWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNL 240
           FH+ CIDTWL+SHKNCPLCRAP+VNE  +    N+  G+P     +S SG  E+  R+N 
Sbjct: 181 FHIPCIDTWLRSHKNCPLCRAPVVNETTQ--GGNSGFGVP----NSSDSGLREDVGRVND 240

Query: 241 DDNFLAG---EGSSSR---------RFPILESLRIAELMKKNRDLRIFSDLGENHRFQRV 300
           +    +G   EGSS +           P++E +RIAE++KKNR+LRI SDLGENHRF RV
Sbjct: 241 NGGLSSGGGEEGSSHQLRERRDVLGELPVMEGIRIAEVLKKNRELRILSDLGENHRFSRV 300

Query: 301 EDALEPVRRSISFNNVALEPVRSSISFNNEALEP---VRRSISFNNGGTLSSSDRIPNDR 347
           ED +E VRRS S N +A   +  ++  N         V       N G      +I   +
Sbjct: 301 EDGVETVRRSNSLNAIAGSAMCGAMVVNEGYSRDGIFVEGCFCGGNSGVALQEQKIDVGK 349

[Close]

BLAST of Spo08278.1 vs. NCBI nr
Match: gi|747098979|ref|XP_011097526.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Sesamum indicum])

HSP 1 Score: 188.3 bits (477), Expect = 2.900e-44
Identity = 116/272 (42.65%), Postives = 160/272 (58.82%), Query Frame = 1

		  
Query: 26  CFTTCYNSFIPISPPPPPPPP-PPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRFTS 85
           C   CY     + PPPP PPP PP  +QI+   I  +C+L   FL LS  T+    +F +
Sbjct: 27  CPDDCY-----LQPPPPQPPPFPPKTHQISTIFILMLCVLAAVFLFLSYLTV---RKFRN 86

Query: 86  RRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKIDGFFV 145
            RRG S G+ N++    D+      +VDHPIW+I T+GL QS IDSI+ FKYKK DG  +
Sbjct: 87  SRRGNSAGNGNLTEDFIDEHQAP--LVDHPIWYIRTVGLPQSAIDSISVFKYKKGDGL-I 146

Query: 146 EGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIVNEIVRDN 205
           EG D  CS+CL +F+E + LRLLPKCSHAFHV CIDTWL+SHKNCP+CRAPI+       
Sbjct: 147 EGCD--CSICLNEFQENESLRLLPKCSHAFHVLCIDTWLRSHKNCPVCRAPIL------I 206

Query: 206 NNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSRRFPILESLRIAELMKKNR 265
           + N N+ +P  +  TS + S E        D    G    +RR   ++   +A  + +N 
Sbjct: 207 STNVNANLPTGSSETSNTNSNEAENAEETPDETTRGMADENRRAMPVQDDTLAGKLLRNG 266

Query: 266 DLRIFSDLGENHRFQRVEDALEPVRRSISFNN 297
           + R+ SDL ++  + R E  L+ VRR +S ++
Sbjct: 267 NFRVLSDLTDH--WVRSERELQQVRRVVSMDH 277

[Close]

BLAST of Spo08278.1 vs. NCBI nr
Match: gi|359480496|ref|XP_003632477.1| (PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera])

HSP 1 Score: 188.3 bits (477), Expect = 2.900e-44
Identity = 124/303 (40.92%), Postives = 171/303 (56.44%), Query Frame = 1

		  
Query: 14  CFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIATVCILGISFLLLST 73
           CF +GC     +CF         + PP PPPPPP  P++I+P LI  VC LG  F ++S 
Sbjct: 3   CF-KGCHRCATFCFRL-------LPPPSPPPPPPLRPHEISPILIFIVCTLGAVFFVVSC 62

Query: 74  CTIILRLR--FTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSI 133
           CT++L+    +   RR       +      D+E     VV HPIW I T+GLQQSVID I
Sbjct: 63  CTVVLKYYSGWNRSRRSDPPVQNHTHEDFIDEEQSP--VVYHPIWLINTVGLQQSVIDLI 122

Query: 134 TAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPL 193
           T  KY K +G  +EG++  CSVCL +FEE + LRLLPKCSHAFHV CIDTWL+SHKNCPL
Sbjct: 123 TVIKYNKEEGL-IEGTE--CSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHKNCPL 182

Query: 194 CRAPIVNE--------IVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGS 253
           CRAPI++E        + +D+N++ +     ++ + + SG     V          GEG 
Sbjct: 183 CRAPIIHENVGSHLNAVEQDSNDSGSREDMEIDNSETHSGLGSSEV----------GEGG 242

Query: 254 SSR---RFPILESLRIAELMKK--------NRDLRIFSDLGENHRFQRVEDALEPVRRSI 296
           ++        +E  R  E+++K          +LR+ SDL +NHR    E+ +EPVRRS+
Sbjct: 243 TAEVGVGVLAVEEARTNEIVRKGLPYMNAGKYELRVLSDLVDNHRAS--EEQIEPVRRSV 280

[Close]

BLAST of Spo08278.1 vs. NCBI nr
Match: gi|970060347|ref|XP_015056931.1| (PREDICTED: RING-H2 finger protein ATL54-like [Solanum pennellii])

HSP 1 Score: 184.9 bits (468), Expect = 3.200e-43
Identity = 127/331 (38.37%), Postives = 176/331 (53.17%), Query Frame = 1

		  
Query: 26  CFTTC---YNSFIPISPPPPPPPPPP---PPNQIAPF-LIATVCILGISFLLLSTCTIIL 85
           C   C   Y++++P   P  PPPPPP         PF  I  +C+ G  F+ +    I+ 
Sbjct: 30  CTNDCGDHYDTYVPSDGPFFPPPPPPYVTSEKYHMPFYFIIMLCVFGAFFMFICYMIILR 89

Query: 86  RLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKK 145
           R R  SR   VS+        + D+    G ++DHPIW+I T+GL Q VIDSIT FKYKK
Sbjct: 90  RSRSNSRPNNVSQFDETREDFVIDEN--LGPMLDHPIWYIRTVGLGQDVIDSITVFKYKK 149

Query: 146 IDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIVN 205
            D F ++GSD  CSVCLT+FEE + LRLLPKCSHAFH+ CIDTWL+SHKNCPLCRAPIV+
Sbjct: 150 -DEFLIDGSD--CSVCLTEFEEDESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPIVS 209

Query: 206 EIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSR-RFPILESLRIA 265
           +         N   PR++    V    ++    N  D  L  EGS+   R  ++E++   
Sbjct: 210 D---------NDTSPRMDRVVEVVSVGDDGSSTNDVDLELDEEGSNQEMRCGVVENIDEE 269

Query: 266 ELMKKNRDL----------------RIFSDLGENHR-FQRVEDALEPVRRSISFNNVALE 325
           E  +   DL                R FSDL + HR  + + D L+P RRS+S ++   +
Sbjct: 270 EEGRSTMDLSMKIPRVNVDGRRKGGRAFSDLVDQHRVVKEINDELQPARRSVSMDSSVAQ 329

Query: 326 PVRSSISFNNEALEPVRRSISFNNGGTLSSS 332
            +  ++  N    + V +  S +  G  +SS
Sbjct: 330 VIHLAM-INEMNSKKVDQGCSSSKRGDRNSS 345

[Close]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QE99_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194380 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 3.200e-215
Identity = 404/466 (86.70%), Postives = 410/466 (87.98%), Query Frame = 1

		  
Query: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT 60
           MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT
Sbjct: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIAT 60

Query: 61  VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT 120
           VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT
Sbjct: 61  VCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITT 120

Query: 121 IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID 180
           IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID
Sbjct: 121 IGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCID 180

Query: 181 TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG 240
           TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG
Sbjct: 181 TWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAG 240

Query: 241 EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE 300
           EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE
Sbjct: 241 EGSSSRRFPILESLRIAELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNNVALE 300

Query: 301 PVRSSISFNNEALEPVRRSISFNNGGTLSSSDRIPNDRCPNNEGSSNGRCPNNEGYPSDR 360
                         PVR SISFNN     + + +      NN G+               
Sbjct: 301 --------------PVRSSISFNN----EALEPVRRSISFNNGGTL-------------- 360

Query: 361 SPNNEGSSNGGCPNNEGYSSDRSSKEECSVEGDSEVVLQEKKHNSEKGCNNKRGTSMSGL 420
                 SS+   PN+  YSSDRSSKEECSVEGDSEVVLQEKKHNSEKG NNKRGTSMSGL
Sbjct: 361 ------SSSDRIPNDRWYSSDRSSKEECSVEGDSEVVLQEKKHNSEKGGNNKRGTSMSGL 420

Query: 421 SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL 467
           SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL
Sbjct: 421 SIKSPSVVDPSLQQKGPVSMKRSLSSSSSRFFSFRRTKSTASILPL 428

[Close]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C8M9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g138790 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.800e-86
Identity = 195/368 (52.99%), Postives = 236/368 (64.13%), Query Frame = 1

		  
Query: 1   MAEPSNPDYGSISCFLRGCVDPPPYCFTTCYNSF-----IPISPPPPPPPPPPPPNQ--I 60
           MAE   P  G+  CF         +  TTC+N+       P+ PPPPPP PPP  +Q  +
Sbjct: 1   MAETPTPSNGAFPCF---------FGTTTCFNADGDDYPFPLLPPPPPPSPPPQSSQTHM 60

Query: 61  APFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDH 120
           APFLIAT+CILGISFLLLSTCT+ILRLRFT RRR VS      SP +ND+++     VDH
Sbjct: 61  APFLIATICILGISFLLLSTCTVILRLRFTGRRRVVSPEIPEGSP-MNDEDS---VFVDH 120

Query: 121 PIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHA 180
           PIWHITT+GL QSVIDSITAFKYKKIDGFF +GSD SCSVCLT+FEEGDDLRLLPKCSHA
Sbjct: 121 PIWHITTVGLHQSVIDSITAFKYKKIDGFFFDGSDSSCSVCLTEFEEGDDLRLLPKCSHA 180

Query: 181 FHVSCIDTWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNL 240
           FH+ CIDTWL+SHKNCPLCRAP+VNE  +    N+  G+P     +S SG  E+  R+N 
Sbjct: 181 FHIPCIDTWLRSHKNCPLCRAPVVNETTQ--GGNSGFGVP----NSSDSGLREDVGRVND 240

Query: 241 DDNFLAG---EGSSSR---------RFPILESLRIAELMKKNRDLRIFSDLGENHRFQRV 300
           +    +G   EGSS +           P++E +RIAE++KKNR+LRI SDLGENHRF RV
Sbjct: 241 NGGLSSGGGEEGSSHQLRERRDVLGELPVMEGIRIAEVLKKNRELRILSDLGENHRFSRV 300

Query: 301 EDALEPVRRSISFNNVALEPVRSSISFNNEALEP---VRRSISFNNGGTLSSSDRIPNDR 347
           ED +E VRRS S N +A   +  ++  N         V       N G      +I   +
Sbjct: 301 EDGVETVRRSNSLNAIAGSAMCGAMVVNEGYSRDGIFVEGCFCGGNSGVALQEQKIDVGK 349

[Close]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Match: F6HRP9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0191g00230 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.000e-44
Identity = 124/303 (40.92%), Postives = 171/303 (56.44%), Query Frame = 1

		  
Query: 14  CFLRGCVDPPPYCFTTCYNSFIPISPPPPPPPPPPPPNQIAPFLIATVCILGISFLLLST 73
           CF +GC     +CF         + PP PPPPPP  P++I+P LI  VC LG  F ++S 
Sbjct: 3   CF-KGCHRCATFCFRL-------LPPPSPPPPPPLRPHEISPILIFIVCTLGAVFFVVSC 62

Query: 74  CTIILRLR--FTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSI 133
           CT++L+    +   RR       +      D+E     VV HPIW I T+GLQQSVID I
Sbjct: 63  CTVVLKYYSGWNRSRRSDPPVQNHTHEDFIDEEQSP--VVYHPIWLINTVGLQQSVIDLI 122

Query: 134 TAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPL 193
           T  KY K +G  +EG++  CSVCL +FEE + LRLLPKCSHAFHV CIDTWL+SHKNCPL
Sbjct: 123 TVIKYNKEEGL-IEGTE--CSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHKNCPL 182

Query: 194 CRAPIVNE--------IVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGS 253
           CRAPI++E        + +D+N++ +     ++ + + SG     V          GEG 
Sbjct: 183 CRAPIIHENVGSHLNAVEQDSNDSGSREDMEIDNSETHSGLGSSEV----------GEGG 242

Query: 254 SSR---RFPILESLRIAELMKK--------NRDLRIFSDLGENHRFQRVEDALEPVRRSI 296
           ++        +E  R  E+++K          +LR+ SDL +NHR    E+ +EPVRRS+
Sbjct: 243 TAEVGVGVLAVEEARTNEIVRKGLPYMNAGKYELRVLSDLVDNHRAS--EEQIEPVRRSV 280

[Close]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Match: K4D5J4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.600e-42
Identity = 118/294 (40.14%), Postives = 162/294 (55.10%), Query Frame = 1

		  
Query: 26  CFTTCYNSFIPISPPPPPPPPPP---PPNQIAPF-LIATVCILGISFLLLSTCTIILRLR 85
           C   C ++++P   P  PPPPPP         PF  I  +C+ G  F+ +    I+ R R
Sbjct: 30  CTNDCGDTYVPSDGPFFPPPPPPYVTSEKYHMPFYFIIMLCVFGAFFMFICYMIILRRSR 89

Query: 86  FTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKIDG 145
             SR   VS+        + D+    G ++DHPIW+I T+GL Q VIDSIT FKY+K D 
Sbjct: 90  SNSRPNNVSQFDETREDFVIDEN--LGPMLDHPIWYIRTVGLGQDVIDSITVFKYRK-DE 149

Query: 146 FFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIVNEIV 205
           F ++GSD  CSVCLT+FEE + LRLLPKCSHAFH+ CIDTWL+SHKNCPLCRAPIV++  
Sbjct: 150 FLIDGSD--CSVCLTEFEEDESLRLLPKCSHAFHIPCIDTWLRSHKNCPLCRAPIVSD-- 209

Query: 206 RDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSR-RFPILESLRIAE-- 265
                  N   PR++    V    ++    N  D  L  EG++   R  ++E++   E  
Sbjct: 210 -------NDTSPRMDRVVEVVSVGDDGSSTNDVDLELDEEGNNQEMRCGVVENVDEEEEE 269

Query: 266 -------LMK--------KNRDLRIFSDLGENHR-FQRVEDALEPVRRSISFNN 297
                   MK        + +  R FSDL + HR  + + D L+P RRS+S ++
Sbjct: 270 GRSTLDLSMKIPRVNVDGRRKGGRAFSDLVDQHRVVKEINDELQPARRSVSMDS 309

[Close]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Match: A0A068U1N3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036607001 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.100e-41
Identity = 113/278 (40.65%), Postives = 166/278 (59.71%), Query Frame = 1

		  
Query: 43  PPPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRGSTNVSPTIND 102
           PP PP   N +  FL+  +CILG  F+ +    +  R R+ +  R   R S++     ++
Sbjct: 50  PPTPPSQKNSMPTFLVLMLCILGAVFVFIFY--LAFRRRYQTNLRNSIRISSSADGARDE 109

Query: 103 --DENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEE 162
             DEN  G  V HPIW+I T+GL+QSVIDSI  FKYKK DG  +EG+D  CSVCL++FE+
Sbjct: 110 FLDEN-HGPRVHHPIWYIRTVGLEQSVIDSIAVFKYKKGDGL-IEGTD--CSVCLSEFED 169

Query: 163 GDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIVNEIVRDNNNNNNSGIPRLNLTTS 222
            + LRLLPKCSHAFH++C+DTWL+SHKNCPLCRAP    +V D + N ++ +P++N +  
Sbjct: 170 DESLRLLPKCSHAFHITCVDTWLRSHKNCPLCRAP----VVCDTDVNTSTDVPQMNTSQP 229

Query: 223 V-------SGSWEESVRLNLDDNFLAGEGSSSRRFPILESL--------RIAELMKKN-- 282
           V       SG  E+    N  ++    EG +S     +E++        ++ EL++KN  
Sbjct: 230 VLDNRLDTSGPREDDRLDNQQESDAVAEGMTSELRIGVENIGPISHEEGKVLELLRKNCN 289

Query: 283 ------RDLRIFSDLGENHRFQRVEDALEPVRRSISFN 296
                   +R+ SDL + HR  R+ + ++PVRRS+S +
Sbjct: 290 NFAAGKNRVRVLSDLAD-HRV-RIGEEMQPVRRSLSMD 315

[Close]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.600e-34
Identity = 79/162 (48.77%), Postives = 107/162 (66.05%), Query Frame = 1

		  
Query: 41  PPPPPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRR----GVSRGSTNV 100
           PPPPPPPPPP +++  L  ++C++G S +L       L L  T +RR     V+ G TN 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQ 85

Query: 101 SPTINDDENGSGSVVD-HPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCL 160
               ++DE       D H +W I T+GL +S I+SIT   +KK +G  ++G++  CSVCL
Sbjct: 86  QE--DEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGI-IDGTE--CSVCL 145

Query: 161 TDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIV 198
            +FEE + LRLLPKCSHAFH++CIDTWL SHKNCPLCRAP++
Sbjct: 146 NEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.000e-32
Identity = 109/279 (39.07%), Postives = 148/279 (53.05%), Query Frame = 1

		  
Query: 25  YCFTTCYNSFIPISPPPPPP-----PPPPPPNQIAPFLIATVCILGISFLLLSTCTIILR 84
           YC   CY  F    PPPPP            +  +P LIA + IL  + +L+S  T+I +
Sbjct: 25  YCPQWCYLIF----PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISK 84

Query: 85  LRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKI 144
             +  R        T+ S T+N + NG G             GL +S+I SIT +KYK  
Sbjct: 85  --YCHRHH-----QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG 144

Query: 145 DGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPI--V 204
           DGF V+GSD  CSVCL++FEE + LRLLPKC+HAFH+ CIDTWLKSH NCPLCRA +  V
Sbjct: 145 DGF-VDGSD--CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGV 204

Query: 205 NEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSRRFPILESLRIA 264
           N        N +  +   + +   +GS  E   +NL+   LAG  S +  F  +  +   
Sbjct: 205 NNPTASVGQNVSVVVANQSNSAHQTGSVSE---INLN---LAGYESQTGDFDSVVVIEDL 264

Query: 265 ELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNN 297
           E+  +N D R    L E  R  + ED+L P+RRS+S N+
Sbjct: 265 EIGSRNSDARSELQLPEERRETKDEDSL-PIRRSVSLNS 282

[Close]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 1.200e-26
Identity = 90/238 (37.82%), Postives = 123/238 (51.68%), Query Frame = 1

		  
Query: 25  YCFTTCYNSFIPISPPPPP----PPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRL 84
           YC   CY  F    PPPP            +  +P LIA + IL  +F+L+S  T+I + 
Sbjct: 28  YCPQWCYVIF----PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKY 87

Query: 85  RFTSRRRGVSRGSTNVSPT--------INDDENGSGSVVDHPIWHITTIGLQQSVIDSIT 144
               R    S  +  ++           N++ N   +  +  I      GL +S+I SIT
Sbjct: 88  CHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSIT 147

Query: 145 AFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLC 204
            +KY+K+DGF VE SD  CSVCL++F+E + LRLLPKC+HAFHV CIDTWLKSH NCPLC
Sbjct: 148 VYKYRKMDGF-VESSD--CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLC 207

Query: 205 RAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDD----NFLAGEGSSSR 247
           RA IV     +  +  N  I   N + S        V L+L++    N    EGS+ +
Sbjct: 208 RAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPK 258

[Close]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 1.400e-25
Identity = 78/192 (40.62%), Postives = 103/192 (53.65%), Query Frame = 1

		  
Query: 25  YCFTTCYNSFIPISPPPPPPPPPPPPNQIA-------------PFLIATVCILGISFLLL 84
           YC   CY  F           PPPPP  +A             P +IA + +L  +FLL+
Sbjct: 25  YCPQWCYFIF-----------PPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLV 84

Query: 85  STCTIILRLRFT-SRRRGVSRGSTNVSPTI-----NDDENGSGSVVDHPIWHITT-IGLQ 144
           S  T I +   T S  RG   GS++          +   +G G    H  W+++   GL 
Sbjct: 85  SYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLD 144

Query: 145 QSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLK 197
           +++I+ IT  KY++ DGF V  +D  CSVCL +F +G+ LRLLP+CSHAFH  CIDTWLK
Sbjct: 145 ETLINKITVCKYRRGDGF-VHTTD--CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLK 202

[Close]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.400e-22
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 1

		  
Query: 51  NQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRG--STNVSPTINDDENGSG 110
           N+I+P ++  + +L + F + S   +++R     +R  +S     +N +P  +D +    
Sbjct: 47  NRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQR 106

Query: 111 SVVDHPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLP 170
            +    ++H+   GL Q++ID++  F YK+I G         C+VCL +F E D LRLLP
Sbjct: 107 QL--QQLFHLHDSGLDQALIDALPVFLYKEIKG---TKEPFDCAVCLCEFSEDDKLRLLP 166

Query: 171 KCSHAFHVSCIDTWLKSHKNCPLCRAPI 197
            CSHAFH+ CIDTWL S+  CPLCR  +
Sbjct: 167 NCSHAFHIDCIDTWLLSNSTCPLCRGTL 189

[Close]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Match: AT5G10380.1 (RING/U-box superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 2.000e-35
Identity = 79/162 (48.77%), Postives = 107/162 (66.05%), Query Frame = 1

		  
Query: 41  PPPPPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRR----GVSRGSTNV 100
           PPPPPPPPPP +++  L  ++C++G S +L       L L  T +RR     V+ G TN 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQ 85

Query: 101 SPTINDDENGSGSVVD-HPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCL 160
               ++DE       D H +W I T+GL +S I+SIT   +KK +G  ++G++  CSVCL
Sbjct: 86  QE--DEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGI-IDGTE--CSVCL 145

Query: 161 TDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIV 198
            +FEE + LRLLPKCSHAFH++CIDTWL SHKNCPLCRAP++
Sbjct: 146 NEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 1.100e-33
Identity = 109/279 (39.07%), Postives = 148/279 (53.05%), Query Frame = 1

		  
Query: 25  YCFTTCYNSFIPISPPPPPP-----PPPPPPNQIAPFLIATVCILGISFLLLSTCTIILR 84
           YC   CY  F    PPPPP            +  +P LIA + IL  + +L+S  T+I +
Sbjct: 25  YCPQWCYLIF----PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISK 84

Query: 85  LRFTSRRRGVSRGSTNVSPTINDDENGSGSVVDHPIWHITTIGLQQSVIDSITAFKYKKI 144
             +  R        T+ S T+N + NG G             GL +S+I SIT +KYK  
Sbjct: 85  --YCHRHH-----QTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG 144

Query: 145 DGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPI--V 204
           DGF V+GSD  CSVCL++FEE + LRLLPKC+HAFH+ CIDTWLKSH NCPLCRA +  V
Sbjct: 145 DGF-VDGSD--CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGV 204

Query: 205 NEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDDNFLAGEGSSSRRFPILESLRIA 264
           N        N +  +   + +   +GS  E   +NL+   LAG  S +  F  +  +   
Sbjct: 205 NNPTASVGQNVSVVVANQSNSAHQTGSVSE---INLN---LAGYESQTGDFDSVVVIEDL 264

Query: 265 ELMKKNRDLRIFSDLGENHRFQRVEDALEPVRRSISFNN 297
           E+  +N D R    L E  R  + ED+L P+RRS+S N+
Sbjct: 265 EIGSRNSDARSELQLPEERRETKDEDSL-PIRRSVSLNS 282

[Close]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Match: AT4G33565.1 (RING/U-box superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 1.100e-28
Identity = 86/188 (45.74%), Postives = 109/188 (57.98%), Query Frame = 1

		  
Query: 25  YCFTTCYN--SFIPISPPPPPPPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRLRF 84
           YC   C +    + IS   PP       N     +I+   I+   FLL     ++L  +F
Sbjct: 92  YCLDECPSICEIVVISGLSPPAEIHHDDNLKRILIISASSIITTLFLLT---LLVLCFKF 151

Query: 85  TSRRRGVSRGST--NVSPTINDDENGSGSV-VDHPIWHITTIGLQQSVIDSITAFKYKKI 144
             RRR     S   ++    N D +G   V VDHPIWHI TIGL  +VI SI   +Y K 
Sbjct: 152 YYRRRRSITTSRRWSMEEARNWDFDGPAPVIVDHPIWHIRTIGLNPTVISSIKVCQYSKK 211

Query: 145 DGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLCRAPIV-- 204
           DG  VEG+D  CSVCL++FEE + LRLLPKC HAFH+ CIDTWL+SH NCPLCRAPIV  
Sbjct: 212 DGV-VEGTD--CSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEA 271

Query: 205 NEIVRDNN 206
           N ++ D++
Sbjct: 272 NTMIDDHS 273

[Close]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 7.000e-28
Identity = 90/238 (37.82%), Postives = 123/238 (51.68%), Query Frame = 1

		  
Query: 25  YCFTTCYNSFIPISPPPPP----PPPPPPPNQIAPFLIATVCILGISFLLLSTCTIILRL 84
           YC   CY  F    PPPP            +  +P LIA + IL  +F+L+S  T+I + 
Sbjct: 28  YCPQWCYVIF----PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKY 87

Query: 85  RFTSRRRGVSRGSTNVSPT--------INDDENGSGSVVDHPIWHITTIGLQQSVIDSIT 144
               R    S  +  ++           N++ N   +  +  I      GL +S+I SIT
Sbjct: 88  CHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSIT 147

Query: 145 AFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLPKCSHAFHVSCIDTWLKSHKNCPLC 204
            +KY+K+DGF VE SD  CSVCL++F+E + LRLLPKC+HAFHV CIDTWLKSH NCPLC
Sbjct: 148 VYKYRKMDGF-VESSD--CSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLC 207

Query: 205 RAPIVNEIVRDNNNNNNSGIPRLNLTTSVSGSWEESVRLNLDD----NFLAGEGSSSR 247
           RA IV     +  +  N  I   N + S        V L+L++    N    EGS+ +
Sbjct: 208 RAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRSRNETVNEGSTPK 258

[Close]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Match: AT1G23980.1 (RING/U-box superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 8.000e-24
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 1

		  
Query: 51  NQIAPFLIATVCILGISFLLLSTCTIILRLRFTSRRRGVSRG--STNVSPTINDDENGSG 110
           N+I+P ++  + +L + F + S   +++R     +R  +S     +N +P  +D +    
Sbjct: 47  NRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQR 106

Query: 111 SVVDHPIWHITTIGLQQSVIDSITAFKYKKIDGFFVEGSDLSCSVCLTDFEEGDDLRLLP 170
            +    ++H+   GL Q++ID++  F YK+I G         C+VCL +F E D LRLLP
Sbjct: 107 QL--QQLFHLHDSGLDQALIDALPVFLYKEIKG---TKEPFDCAVCLCEFSEDDKLRLLP 166

Query: 171 KCSHAFHVSCIDTWLKSHKNCPLCRAPI 197
            CSHAFH+ CIDTWL S+  CPLCR  +
Sbjct: 167 NCSHAFHIDCIDTWLLSNSTCPLCRGTL 189

The following BLAST results are available for this feature:

BLAST of Spo08278.1 vs. NCBI nr
BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
BLAST of Spo08278.1 vs. TAIR (Arabidopsis)

BLAST of Spo08278.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902145919\|gb\|KNA05013.1\|	4.6e-215	86.7	hypothetical protein SOVF_1943...	[more]
gi\|731339752\|ref\|XP_010681026.1\|	4.1e-86	52.9	PREDICTED: RING-H2 finger prot...	[more]
gi\|747098979\|ref\|XP_011097526.1\|	2.9e-44	42.6	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|359480496\|ref\|XP_003632477.1\|	2.9e-44	40.9	PREDICTED: RING-H2 finger prot...	[more]
gi\|970060347\|ref\|XP_015056931.1\|	3.2e-43	38.3	PREDICTED: RING-H2 finger prot...	[more]

BLAST of Spo08278.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QE99_SPIOL	3.2e-215	86.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8C8M9_BETVU	2.8e-86	52.9	Uncharacterized protein OS=Bet...	[more]
F6HRP9_VITVI	2.0e-44	40.9	Putative uncharacterized prote...	[more]
K4D5J4_SOLLC	5.6e-42	40.1	Uncharacterized protein OS=Sol...	[more]
A0A068U1N3_COFCA	2.1e-41	40.6	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo08278.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
ATL55_ARATH	3.6e-34	48.7	E3 ubiquitin-protein ligase RI...	[more]
ATL52_ARATH	2.0e-32	39.0	RING-H2 finger protein ATL52 O...	[more]
ATL51_ARATH	1.2e-26	37.8	RING-H2 finger protein ATL51 O...	[more]
ATL41_ORYSJ	1.4e-25	40.6	E3 ubiquitin-protein ligase Os...	[more]
ATL47_ARATH	1.4e-22	35.8	RING-H2 finger protein ATL47 O...	[more]

BLAST of Spo08278.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT5G10380.1	2.0e-35	48.7	RING/U-box superfamily protein	[more]
AT5G17600.1	1.1e-33	39.0	RING/U-box superfamily protein	[more]
AT4G33565.1	1.1e-28	45.7	RING/U-box superfamily protein	[more]
AT3G03550.1	7.0e-28	37.8	RING/U-box superfamily protein	[more]
AT1G23980.1	8.0e-24	35.8	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 150..193 score: 9.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 151..192 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 151..193 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 147..197 score: 1.7
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 24..222 score: 2.0
None	No IPR available	PANTHER	PTHR14155:SF94	RING-H2 FINGER PROTEIN ATL33-RELATED	coord: 24..222 score: 2.0
None	No IPR available	unknown	SSF101447	Formin homology 2 domain (FH2 domain)	coord: 40..49 score: 4.7
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 145..199 score: 1.34

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0051716	cellular response to stimulus
biological_process	GO:0006952	defense response
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0050794	regulation of cellular process
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21615	0.70	Barchart \| Table
Spo12332	0.68	Barchart \| Table
Spo08009	0.68	Barchart \| Table
Spo16640	0.68	Barchart \| Table
Spo12005	0.67	Barchart \| Table
Spo11860	0.66	Barchart \| Table
Spo22404	0.65	Barchart \| Table