Spo06385 (gene) | SpinachBase

Overview


Name	Spo06385
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Small heat shock protein
Location	SpoScf_00953 : 48148 .. 49573 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAGGTACTTAAAATACCTTTACATTTCTTTCAATCAAAATAATCAAATTGGAAATACGGCTTCTACATGAATAAAGATCGAGAGAGTCTTACACATGACTCAACACTAGTATAAATAAGCTTCAATTCTAAGAATAAGTAAATAAATAACCATACATCTTCTAGTATTTCTATATTTGGTATAGCATAAAAATGGCAAGTAAGGTATTAGCATGCTCGGTTTCAACTGTAGTGTCCAACCGGGCCTTTAATAGCCCATTACCAGTTGGTTTGGTCTCATCGGCCCCATCTGTGGTGTCGGCTGGACAACCCAAGAAGAAGCCTTCTTCAAGGTCGTCCCTAGTGGTTCGAGCCCAACAAGGAGGTGGACAGCCAATTGACTCTCACAATCCCATGACTGGTGAACCCTTTCACAAGAAGGTCGCCCTCCTTGAAACCTCTCCTTACGGTAAATATAAAATATTCCTCTACTACAACTTATTTACTTTCACTTTTACCACATCAATATTGCATTTGTGACACTTTTCTCTCTAAGGGTCGTGTTAACCAAATATTTTCTGTATGCGAAAATGATAAAGGTCGTAACATGCGACCTTTAAGCCGTGTCACAATGATGACATGACATGCTTATGTGTCATGATTTAAATTGGAAATTAAAATATTTAACTTACATAACATATTCTACATGTTTCAAAAAAAAGGTAGAAAAATCTTAATATTCTAATTTGTTTCCTTCTTTATATCGATTACCTTATTTACATATTTTCATAGTAAAAATATTGTATTGATAGTAAAAATATTCTGATGACGCATAGTTTATGTGCCGCCTATATGTACCAATTAAACTGCGACACGTAAAATTACGACAGCATTAGTTGTCGCAAGTCCTTCCATATGATATAATTACTAATGCTTTATTTTATTTTTATGTAGTCCGGACCCCCTGGAATACTAGCGAGGATGAAAACGAGATCAGGATGTGGTTTGACATGCCAGGAACTGCAGCAGAAAATATAGAAGTGGATGTTGTGGATAATTTGCTAGTGATTAAGGGAGAAGGTGGAATTGATGCTTTTGGAAGGAAGATCCATAGCCCCTATGACACCAGGGTTCAATTGCCTTCTAATTCTTGGAACGAAGAGATAACGGCCGTCTTTAAAAATGGAGTTCTGTATATTACTGTGCCAAAGATTACCAAATTTGAGCACAAAATTATCCACATTCCCGTTAGATCCGTCTAATTCTAATTCCTTAGTCCTTACCTGTTATGTATTCATTAAAATGAATTGGCTCTCAAGCTTGCATGTGAGACATTGCATGCGTTCAGAATTTTAATTAACATCCTTCCATTTAAATTTTAAATATTACTACGTATTCGTGAATAAAACTCATTGTTTAACCTGCTTTTATGTCATACTTCCTCC

mRNA sequence

TTTTAGGTACTTAAAATACCTTTACATTTCTTTCAATCAAAATAATCAAATTGGAAATACGGCTTCTACATGAATAAAGATCGAGAGAGTCTTACACATGACTCAACACTAGTATAAATAAGCTTCAATTCTAAGAATAAGTAAATAAATAACCATACATCTTCTAGTATTTCTATATTTGGTATAGCATAAAAATGGCAAGTAAGGTATTAGCATGCTCGGTTTCAACTGTAGTGTCCAACCGGGCCTTTAATAGCCCATTACCAGTTGGTTTGGTCTCATCGGCCCCATCTGTGGTGTCGGCTGGACAACCCAAGAAGAAGCCTTCTTCAAGGTCGTCCCTAGTGGTTCGAGCCCAACAAGGAGGTGGACAGCCAATTGACTCTCACAATCCCATGACTGGTGAACCCTTTCACAAGAAGGTCGCCCTCCTTGAAACCTCTCCTTACGTCCGGACCCCCTGGAATACTAGCGAGGATGAAAACGAGATCAGGATGTGGTTTGACATGCCAGGAACTGCAGCAGAAAATATAGAAGTGGATGTTGTGGATAATTTGCTAGTGATTAAGGGAGAAGGTGGAATTGATGCTTTTGGAAGGAAGATCCATAGCCCCTATGACACCAGGGTTCAATTGCCTTCTAATTCTTGGAACGAAGAGATAACGGCCGTCTTTAAAAATGGAGTTCTGTATATTACTGTGCCAAAGATTACCAAATTTGAGCACAAAATTATCCACATTCCCGTTAGATCCGTCTAATTCTAATTCCTTAGTCCTTACCTGTTATGTATTCATTAAAATGAATTGGCTCTCAAGCTTGCATGTGAGACATTGCATGCGTTCAGAATTTTAATTAACATCCTTCCATTTAAATTTTAAATATTACTACGTATTCGTGAATAAAACTCATTGTTTAACCTGCTTTTATGTCATACTTCCTCC

Coding sequence (CDS)

ATGGCAAGTAAGGTATTAGCATGCTCGGTTTCAACTGTAGTGTCCAACCGGGCCTTTAATAGCCCATTACCAGTTGGTTTGGTCTCATCGGCCCCATCTGTGGTGTCGGCTGGACAACCCAAGAAGAAGCCTTCTTCAAGGTCGTCCCTAGTGGTTCGAGCCCAACAAGGAGGTGGACAGCCAATTGACTCTCACAATCCCATGACTGGTGAACCCTTTCACAAGAAGGTCGCCCTCCTTGAAACCTCTCCTTACGTCCGGACCCCCTGGAATACTAGCGAGGATGAAAACGAGATCAGGATGTGGTTTGACATGCCAGGAACTGCAGCAGAAAATATAGAAGTGGATGTTGTGGATAATTTGCTAGTGATTAAGGGAGAAGGTGGAATTGATGCTTTTGGAAGGAAGATCCATAGCCCCTATGACACCAGGGTTCAATTGCCTTCTAATTCTTGGAACGAAGAGATAACGGCCGTCTTTAAAAATGGAGTTCTGTATATTACTGTGCCAAAGATTACCAAATTTGAGCACAAAATTATCCACATTCCCGTTAGATCCGTCTAA

Protein sequence

MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVRSV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo06385.1	Spo06385.1	mRNA

Homology

[Close]

BLAST of Spo06385.1 vs. NCBI nr
Match: gi|902195622|gb|KNA12913.1| (hypothetical protein SOVF_122130 [Spinacia oleracea])

HSP 1 Score: 374.8 bits (961), Expect = 8.900e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ 60
           MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ
Sbjct: 1   MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ 60

Query: 61  PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN 120
           PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN
Sbjct: 61  PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN 120

Query: 121 LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII 180
           LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII
Sbjct: 121 LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII 180

Query: 181 HIPVRSV 188
           HIPVRSV
Sbjct: 181 HIPVRSV 187

[Close]

BLAST of Spo06385.1 vs. NCBI nr
Match: gi|731368725|ref|XP_010696304.1| (PREDICTED: small heat shock protein, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 286.6 bits (732), Expect = 3.200e-74
Identity = 151/187 (80.75%), Postives = 163/187 (87.17%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRS-SLVVRAQQGGG 60
           MA+ +L  S ST+VS+R F SPLPVGL    PSV+SA  P KKPSSR   LVVRAQQGGG
Sbjct: 1   MATNMLTSSPSTLVSSRGFPSPLPVGLCP--PSVLSAA-PSKKPSSRPCGLVVRAQQGGG 60

Query: 61  QPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVD 120
           Q +D   PMTGE FHKKVAL+ETSPYVRTPWNTSEDE+EI+MWFDMPG AAENIEVDVVD
Sbjct: 61  QQMD---PMTGEHFHKKVALIETSPYVRTPWNTSEDEHEIKMWFDMPGLAAENIEVDVVD 120

Query: 121 NLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKI 180
           NLLVIKGEGGIDAFGRKI SPYD+RVQLP+NSW EEITA+FKNGVLYITVPKITKFEHKI
Sbjct: 121 NLLVIKGEGGIDAFGRKIFSPYDSRVQLPTNSWREEITAMFKNGVLYITVPKITKFEHKI 180

Query: 181 IHIPVRS 187
           IHIPVRS
Sbjct: 181 IHIPVRS 181

[Close]

BLAST of Spo06385.1 vs. NCBI nr
Match: gi|870843989|gb|KMS97055.1| (hypothetical protein BVRB_7g179160 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 283.1 bits (723), Expect = 3.500e-73
Identity = 149/183 (81.42%), Postives = 160/183 (87.43%), Query Frame = 1

		  
Query: 5   VLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRS-SLVVRAQQGGGQPID 64
           +L  S ST+VS+R F SPLPVGL    PSV+SA  P KKPSSR   LVVRAQQGGGQ +D
Sbjct: 1   MLTSSPSTLVSSRGFPSPLPVGLCP--PSVLSAA-PSKKPSSRPCGLVVRAQQGGGQQMD 60

Query: 65  SHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLV 124
              PMTGE FHKKVAL+ETSPYVRTPWNTSEDE+EI+MWFDMPG AAENIEVDVVDNLLV
Sbjct: 61  ---PMTGEHFHKKVALIETSPYVRTPWNTSEDEHEIKMWFDMPGLAAENIEVDVVDNLLV 120

Query: 125 IKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIP 184
           IKGEGGIDAFGRKI SPYD+RVQLP+NSW EEITA+FKNGVLYITVPKITKFEHKIIHIP
Sbjct: 121 IKGEGGIDAFGRKIFSPYDSRVQLPTNSWREEITAMFKNGVLYITVPKITKFEHKIIHIP 177

Query: 185 VRS 187
           VRS
Sbjct: 181 VRS 177

[Close]

BLAST of Spo06385.1 vs. NCBI nr
Match: gi|731327227|ref|XP_010674414.1| (PREDICTED: small heat shock protein, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 263.1 bits (671), Expect = 3.800e-67
Identity = 139/189 (73.54%), Postives = 155/189 (82.01%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSN-RAFNSPLPVGLVSSAPSVVSAGQPKKKPSSR-SSLVVRAQQGG 60
           MAS VL CS S +VSN RA  SPLP+GL     SVVS   P K PSSR S LVV+AQQGG
Sbjct: 1   MASNVLTCSASVLVSNNRALKSPLPIGL--GPCSVVSLTPPLKAPSSRPSGLVVKAQQGG 60

Query: 61  GQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVV 120
                  +P+  + FHKKVALL+TSPYVRTPWNT+EDE+EIRMWFDMPG AAENI+V+VV
Sbjct: 61  SPK--KMDPLVADHFHKKVALLDTSPYVRTPWNTNEDEHEIRMWFDMPGLAAENIDVNVV 120

Query: 121 DNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHK 180
           D+LLVIKG+GG+DAFG KI SPYD+RVQLP NSW EEITAVFKNGVLYITVPKITKFEHK
Sbjct: 121 DDLLVIKGDGGVDAFGNKIFSPYDSRVQLPLNSWKEEITAVFKNGVLYITVPKITKFEHK 180

Query: 181 IIHIPVRSV 188
           +IHIPVRSV
Sbjct: 181 VIHIPVRSV 185

[Close]

BLAST of Spo06385.1 vs. NCBI nr
Match: gi|902193027|gb|KNA12183.1| (hypothetical protein SOVF_128390 [Spinacia oleracea])

HSP 1 Score: 256.9 bits (655), Expect = 2.700e-65
Identity = 133/193 (68.91%), Postives = 156/193 (80.83%), Query Frame = 1

		  
Query: 1   MASKVLACSV-STVVSNRAFNSPLPVGL-----VSSAPSVVSAGQPKKKPSSRSSLVVRA 60
           MASK+L CS  ST+VSNRA + PLP+GL     +   PS+      ++ PSSR SLVV+A
Sbjct: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSI------RRTPSSRPSLVVKA 60

Query: 61  QQGGGQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIE 120
           QQG         PM+GE FH+KVALL TSPYVRTPWNTSEDE+EIRMWFDMPG AAEN+E
Sbjct: 61  QQG-------IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLE 120

Query: 121 VDVVDNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITK 180
           V+ VD+LLVI+G+GG+DAFG KI SPYD+RVQLP+NSW EEITAVFKNGVLYITVPKITK
Sbjct: 121 VETVDDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITK 180

Query: 181 FEHKIIHIPVRSV 188
           FEHKIIH+PVR++
Sbjct: 181 FEHKIIHVPVRAI 180

[Close]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R078_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122130 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 6.200e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ 60
           MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ
Sbjct: 1   MASKVLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRSSLVVRAQQGGGQ 60

Query: 61  PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN 120
           PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN
Sbjct: 61  PIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDN 120

Query: 121 LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII 180
           LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII
Sbjct: 121 LLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKII 180

Query: 181 HIPVRSV 188
           HIPVRSV
Sbjct: 181 HIPVRSV 187

[Close]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E1T2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179160 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.500e-73
Identity = 149/183 (81.42%), Postives = 160/183 (87.43%), Query Frame = 1

		  
Query: 5   VLACSVSTVVSNRAFNSPLPVGLVSSAPSVVSAGQPKKKPSSRS-SLVVRAQQGGGQPID 64
           +L  S ST+VS+R F SPLPVGL    PSV+SA  P KKPSSR   LVVRAQQGGGQ +D
Sbjct: 1   MLTSSPSTLVSSRGFPSPLPVGLCP--PSVLSAA-PSKKPSSRPCGLVVRAQQGGGQQMD 60

Query: 65  SHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLV 124
              PMTGE FHKKVAL+ETSPYVRTPWNTSEDE+EI+MWFDMPG AAENIEVDVVDNLLV
Sbjct: 61  ---PMTGEHFHKKVALIETSPYVRTPWNTSEDEHEIKMWFDMPGLAAENIEVDVVDNLLV 120

Query: 125 IKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIP 184
           IKGEGGIDAFGRKI SPYD+RVQLP+NSW EEITA+FKNGVLYITVPKITKFEHKIIHIP
Sbjct: 121 IKGEGGIDAFGRKIFSPYDSRVQLPTNSWREEITAMFKNGVLYITVPKITKFEHKIIHIP 177

Query: 185 VRS 187
           VRS
Sbjct: 181 VRS 177

[Close]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPV6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078720 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.600e-67
Identity = 139/189 (73.54%), Postives = 155/189 (82.01%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSN-RAFNSPLPVGLVSSAPSVVSAGQPKKKPSSR-SSLVVRAQQGG 60
           MAS VL CS S +VSN RA  SPLP+GL     SVVS   P K PSSR S LVV+AQQGG
Sbjct: 1   MASNVLTCSASVLVSNNRALKSPLPIGL--GPCSVVSLTPPLKAPSSRPSGLVVKAQQGG 60

Query: 61  GQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVV 120
                  +P+  + FHKKVALL+TSPYVRTPWNT+EDE+EIRMWFDMPG AAENI+V+VV
Sbjct: 61  SPK--KMDPLVADHFHKKVALLDTSPYVRTPWNTNEDEHEIRMWFDMPGLAAENIDVNVV 120

Query: 121 DNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHK 180
           D+LLVIKG+GG+DAFG KI SPYD+RVQLP NSW EEITAVFKNGVLYITVPKITKFEHK
Sbjct: 121 DDLLVIKGDGGVDAFGNKIFSPYDSRVQLPLNSWKEEITAVFKNGVLYITVPKITKFEHK 180

Query: 181 IIHIPVRSV 188
           +IHIPVRSV
Sbjct: 181 VIHIPVRSV 185

[Close]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZR6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128390 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.900e-65
Identity = 133/193 (68.91%), Postives = 156/193 (80.83%), Query Frame = 1

		  
Query: 1   MASKVLACSV-STVVSNRAFNSPLPVGL-----VSSAPSVVSAGQPKKKPSSRSSLVVRA 60
           MASK+L CS  ST+VSNRA + PLP+GL     +   PS+      ++ PSSR SLVV+A
Sbjct: 1   MASKLLTCSAASTLVSNRASSYPLPIGLGLGSGLPPKPSI------RRTPSSRPSLVVKA 60

Query: 61  QQGGGQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIE 120
           QQG         PM+GE FH+KVALL TSPYVRTPWNTSEDE+EIRMWFDMPG AAEN+E
Sbjct: 61  QQG-------IEPMSGEKFHQKVALLNTSPYVRTPWNTSEDEHEIRMWFDMPGLAAENLE 120

Query: 121 VDVVDNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITK 180
           V+ VD+LLVI+G+GG+DAFG KI SPYD+RVQLP+NSW EEITAVFKNGVLYITVPKITK
Sbjct: 121 VETVDDLLVIRGDGGVDAFGNKILSPYDSRVQLPNNSWKEEITAVFKNGVLYITVPKITK 180

Query: 181 FEHKIIHIPVRSV 188
           FEHKIIH+PVR++
Sbjct: 181 FEHKIIHVPVRAI 180

[Close]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078730 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.300e-65
Identity = 134/189 (70.90%), Postives = 153/189 (80.95%), Query Frame = 1

		  
Query: 1   MASKVLACSVSTVVSN-RAFNSPLPVGLVSSAPSVVSAGQPKKKPSSR-SSLVVRAQQGG 60
           MAS VL CS ST+VSN RA  SP P+G  S   S VS   P K PSSR S LVV+AQQGG
Sbjct: 1   MASNVLTCSASTLVSNNRALGSPSPIG--SGPRSAVSLTPPLKAPSSRPSGLVVKAQQGG 60

Query: 61  GQPIDSHNPMTGEPFHKKVALLETSPYVRTPWNTSEDENEIRMWFDMPGTAAENIEVDVV 120
                + +P+  + FHKKVALL+T+PYVRTPWNTSED++EIRMWFDMPG A ENI+V++V
Sbjct: 61  SPR--NVDPLVTDHFHKKVALLDTNPYVRTPWNTSEDDHEIRMWFDMPGLAGENIDVNIV 120

Query: 121 DNLLVIKGEGGIDAFGRKIHSPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHK 180
           D+LLVIKG+GG+DAFG KI SPYD+RVQLP NSW EE+TAVFKNGVLYITVPKITK EHK
Sbjct: 121 DDLLVIKGDGGVDAFGNKIFSPYDSRVQLPFNSWKEEVTAVFKNGVLYITVPKITKIEHK 180

Query: 181 IIHIPVRSV 188
           IIHIPVRSV
Sbjct: 181 IIHIPVRSV 185

[Close]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.300e-22
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKG-------EGGIDAFGRKIH 145
           +R PW+  ++E+EIRM FDMPG A E+++V V D++LVIKG        GG D++  + +
Sbjct: 76  IRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTY 135

Query: 146 SPYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVR 186
           S YDTR++LP N   +++ A  KNGVLYIT+PK TK E K+I + V+
Sbjct: 136 SSYDTRLKLPDNCEKDKVKAELKNGVLYITIPK-TKVERKVIDVQVQ 181

[Close]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.000e-21
Identity = 49/105 (46.67%), Postives = 72/105 (68.57%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGE-----GGIDAFGRKIHSP 145
           +R PW   ++E+EIRM FDMPG + E+++V V D++LVIK +     GG D + RK +S 
Sbjct: 129 IRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSC 188

Query: 146 YDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVR 186
           YDTR++LP N   E++ A  K+GVLYIT+PK TK E  +I + ++
Sbjct: 189 YDTRLKLPDNCEKEKVKAELKDGVLYITIPK-TKIERTVIDVQIQ 232

[Close]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.000e-19
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKG----EGGIDAFGRKIHSPY 145
           +R PW+  E+E+EI+M FDMPG + E++++ V DN+LVIKG    E   D++  +  S Y
Sbjct: 125 IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSY 184

Query: 146 DTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVR 186
            TR+QLP N   ++I A  KNGVL+IT+PK TK E K+I + ++
Sbjct: 185 GTRLQLPDNCEKDKIKAELKNGVLFITIPK-TKVERKVIDVQIQ 227

[Close]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.700e-19
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGEGGIDAFGRKIH------S 145
           +RTPW+  +DENEI+M FDMPG + E+++V V +++LVIKGE   +  GR  H      S
Sbjct: 131 IRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYS 190

Query: 146 PYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPV 185
            YDTR+ LP N   ++I A  KNGVL+I++PK T+ E K+I + +
Sbjct: 191 SYDTRLSLPDNVVKDKIKAELKNGVLFISIPK-TEVEKKVIDVQI 234

[Close]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.900e-19
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGE------GGIDAFGRKIHS 145
           +R PW+  +DENEI+M FDMPG + E ++V V D++LVIKGE      G  D++GR  +S
Sbjct: 138 IRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRN-YS 197

Query: 146 PYDTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVR 186
            YDTR+ LP N   +++ A  KNGVL I++PK TK E K+  + ++
Sbjct: 198 SYDTRLSLPDNVDKDKVKAELKNGVLLISIPK-TKVEKKVTDVEIK 241

[Close]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Match: AT4G27670.1 (heat shock protein 21)

HSP 1 Score: 98.2 bits (243), Expect = 5.700e-21
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKG----EGGIDAFGRKIHSPY 145
           +R PW+  E+E+EI+M FDMPG + E++++ V DN+LVIKG    E   D++  +  S Y
Sbjct: 125 IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSY 184

Query: 146 DTRVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPVR 186
            TR+QLP N   ++I A  KNGVL+IT+PK TK E K+I + ++
Sbjct: 185 GTRLQLPDNCEKDKIKAELKNGVLFITIPK-TKVERKVIDVQIQ 227

[Close]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.900e-11
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 1

		  
Query: 86  VRTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGEG------GIDAFGRKIHS 145
           VR  WN  E ++ + +  DMPG + E++++ +  N LVI+GEG       +   GR+   
Sbjct: 107 VRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRR--- 166

Query: 146 PYDTRVQLPSNSW-NEEITAVFKNGVLYITVPKITKFE-HKIIHIPV 185
            + +R++LP   +  +EI A  KNGVL + +PKI + E + I HI V
Sbjct: 167 -FTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINV 209

[Close]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6)

HSP 1 Score: 53.9 bits (128), Expect = 1.200e-7
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 1

		  
Query: 87  RTPWNTSEDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGEGGID----AFGRKIHSPYD 146
           R  W+  E ++ + +  DMPG + E++++ +  + LVI+GEG  +      G   +  + 
Sbjct: 106 RRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFT 165

Query: 147 TRVQLPSNSWN-EEITAVFKNGVLYITVPKITKFE 177
           +R+ LP   +  +EI A  KNGVL + +PK+ + E
Sbjct: 166 SRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQE 200

[Close]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.400e-6
Identity = 27/101 (26.73%), Postives = 53/101 (52.48%), Query Frame = 1

		  
Query: 94  EDENEIRMWFDMPGTAAENIEVDVVDNLLVIKGEGGIDA----------FGRKIHSPYDT 153
           E ++  ++ +++PG   E++++ V D +L IKG+   +           +  K +  Y+T
Sbjct: 131 EQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNT 190

Query: 154 RVQLPSNSWNEEITAVFKNGVLYITVPKITKFEHKIIHIPV 185
            + LP ++  E+I A  KNGVL + +P+  K +  +  I V
Sbjct: 191 SLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISV 231

[Close]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.800e-6
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 1

		  
Query: 104 DMPGTAAENIEVDVVD-NLLVIKGEGGI------DAFGRKIHSP--YDTRVQLPSNSWNE 163
           D+PG   E ++V+V D N+L I GE         D + R   S   +  R +LP N+  E
Sbjct: 66  DLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKME 125

Query: 164 EITAVFKNGVLYITVPKITKFEHKIIHIPV 185
           EI A  +NGVL +TVPK+ + + ++  I +
Sbjct: 126 EIKASMENGVLSVTVPKVPEKKPEVKSIDI 155

The following BLAST results are available for this feature:

BLAST of Spo06385.1 vs. NCBI nr
BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
BLAST of Spo06385.1 vs. TAIR (Arabidopsis)

BLAST of Spo06385.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902195622\|gb\|KNA12913.1\|	8.9e-101	100.	hypothetical protein SOVF_1221...	[more]
gi\|731368725\|ref\|XP_010696304.1\|	3.2e-74	80.7	PREDICTED: small heat shock pr...	[more]
gi\|870843989\|gb\|KMS97055.1\|	3.5e-73	81.4	hypothetical protein BVRB_7g17...	[more]
gi\|731327227\|ref\|XP_010674414.1\|	3.8e-67	73.5	PREDICTED: small heat shock pr...	[more]
gi\|902193027\|gb\|KNA12183.1\|	2.7e-65	68.9	hypothetical protein SOVF_1283...	[more]

BLAST of Spo06385.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R078_SPIOL	6.2e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8E1T2_BETVU	2.5e-73	81.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8CPV6_BETVU	2.6e-67	73.5	Uncharacterized protein OS=Bet...	[more]
A0A0K9QZR6_SPIOL	1.9e-65	68.9	Uncharacterized protein OS=Spi...	[more]
A0A0J8CPW5_BETVU	9.3e-65	70.9	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo06385.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
HS22C_SOYBN	6.3e-22	47.6	Small heat shock protein, chlo...	[more]
HS21C_PEA	7.0e-21	46.6	Small heat shock protein, chlo...	[more]
HS25P_ARATH	1.0e-19	46.1	25.3 kDa heat shock protein, c...	[more]
HS21C_SOLLC	1.7e-19	46.6	Small heat shock protein, chlo...	[more]
HS22C_PETHY	2.9e-19	46.2	Small heat shock protein, chlo...	[more]

BLAST of Spo06385.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT4G27670.1	5.7e-21	46.1	heat shock protein 21	[more]
AT5G51440.1	6.9e-11	35.5	HSP20-like chaperones superfam...	[more]
AT4G25200.1	1.2e-7	30.5	mitochondrion-localized small ...	[more]
AT1G52560.1	1.4e-6	26.7	HSP20-like chaperones superfam...	[more]
AT1G53540.1	8.8e-6	35.5	HSP20-like chaperones superfam...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 93..184 score: 3.7
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 91..171 score: 14
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 80..184 score: 7.5
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 78..184 score: 5.76
None	No IPR available	PANTHER	PTHR11527:SF167	25.3 KDA HEAT SHOCK PROTEIN, CHLOROPLASTIC	coord: 86..187 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004709	MAP kinase kinase kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06873	0.71	Barchart \| Table
Spo26272	0.70	Barchart \| Table
Spo21982	0.70	Barchart \| Table
Spo03878	0.70	Barchart \| Table
Spo15160	0.68	Barchart \| Table
Spo22139	0.68	Barchart \| Table
Spo02208	0.67	Barchart \| Table
Spo09003	0.67	Barchart \| Table
Spo12084	0.67	Barchart \| Table
Spo26108	0.67	Barchart \| Table
Spo23747	0.66	Barchart \| Table
Spo24399	0.66	Barchart \| Table
Spo26910	0.66	Barchart \| Table
Spo26726	0.66	Barchart \| Table
Spo04409	0.65	Barchart \| Table
Spo10274	0.65	Barchart \| Table