Spo09400 (gene)

Overview
NameSpo09400
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00983 : 199456 .. 199671 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTTCGCAAAGTTTACTTACGTCAGATCCTGTGACCGAGAGTTGAAGGAAGGCAGGAATTACTCTAGGATTAAGGTAAAAAAATTAATTTTGATGCCTAGAATGTTTTGTGTATATCAATATATGTATATAAATATGTGTATATCCTGTGTTGTTGACAATACCGAAGTTTTGGTGCCTGTGATTGTATATGTGTTACAAAATACAAAGTAG

mRNA sequence

ATGTGGTTCGCAAAGTTTACTTACGTCAGATCCTGTGACCGAGAGTTGAAGGAAGGCAGGAATTACTCTAGGATTAAGGTAAAAAAATTAATTTTGATGCCTAGAATGTTTTGTGTATATCAATATATGTATATAAATATGTGTATATCCTGTGTTGTTGACAATACCGAAGTTTTGGTGCCTGTGATTGTATATGTGTTACAAAATACAAAGTAG

Coding sequence (CDS)

ATGTGGTTCGCAAAGTTTACTTACGTCAGATCCTGTGACCGAGAGTTGAAGGAAGGCAGGAATTACTCTAGGATTAAGGTAAAAAAATTAATTTTGATGCCTAGAATGTTTTGTGTATATCAATATATGTATATAAATATGTGTATATCCTGTGTTGTTGACAATACCGAAGTTTTGGTGCCTGTGATTGTATATGTGTTACAAAATACAAAGTAG

Protein sequence

MWFAKFTYVRSCDRELKEGRNYSRIKVKKLILMPRMFCVYQYMYINMCISCVVDNTEVLVPVIVYVLQNTK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo09400.1Spo09400.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo09400.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09400.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09400.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09400.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009414 response to water deprivation
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
RNA-Seq Expression