Spo14429 (gene)

Overview
NameSpo14429
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01138 : 203966 .. 206030 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCCTCTCAAGCCACTGTGTGATACAGTCCGTAGAGTATATATGAGCACAGGGTAACCTTATCACCTCCACACCTTCTCCAATCTTTTCCAAACAAATCGAACATTCCCTCTCCTCCCCAAACTCTGTAACTCTCCTCTCTAAATGTCTTTGTTGTAGTATCTACTGATAGGTGCCTTTCAATTTGTAAATGTCTTTCAGATCATTGTTGCTTGCTGCTTGCTGCTTTGAGGCAGTTGTTTATTGCAAAGAATATAGGTGACTTAATTCATTCCTCAGTCTATATAATATGAAACATGTTTTAATCTAAGTGAGACCTTTCTGAATTAGTCCCTGAAGATCTTGTTTCATCCATTCTTTAGGTTGCGATGTCATTAATTTGGGGATGGGTAATGGTGCTTTCAGTGCTTGAAACGGTCAAGGCATTTGAGAAGGCAACAGGAAAGGTAATATTCTGTTTCATTTTTGTCTTAATTAGTCTCATAACTATACAATTCCTGTTATATGTGTTTTTATTTATATGATTTATGCAGAGTTACTTATTATGCGGTATGTTAGAATCAGAATGCATGATATCACTTGTTAATCAGTGTGCTTATGTTTGATTATACTTAATCAGTGTGCAAAGAAAAGGTTCCAGGTAAATAAACCGTTCATCCAAGAATACATTTTCAGGTGTTACTTTTTATTATGTTTAAGATGAAATTTTGATGAGCAACTGGAAAATTAATACACTGGAAAATGAACTTTGATTGATACACTGGAAAATTACAGAAATGAAGGTTAGATTCCAAGCATTCGAGTGGCTTGGAAGTGTTGGCACACTCCCAAGATAATACACTAAAAGTAAATTTAACTTCATAATCTTTAGTCTTATTGATTATTTAATCTGAGAGAGGGAAGGATGGACAAAGCGTTATTAATAATTAATAATGATCTAATATATTGAACTCAAACCCTGTGTTGTTTCTGTACATTTGAATCTTATGCATTCCGTCCCTTCATTTTTGGGCATATAATTTATTTTTATATTTTTTTTGGGAAAGAACTTAGTTCCTTAAATCATCGGATGAAATGATGAATACTCAAAGTCAATGTAGCATTGTTGTAGCATTGTTTTTGCCCCGTCTAGCTTCACTCAAACTTCTTTTAACATTTCTTTCTGTGTGCAGCCTGGACAGAGTTCAGAGCATCAACGTCAGATGACGTTGCTAGAATCTGGTACCCCAGGAGTCCCTCCTTTTGGTGCTTTGAGTTCTGGCTTCACTAATCACTAACCAGACTGCTTCTCCACCTATTCAAGCATATGCTGGCCACCACCACCAACAACATCCGATGCCACAGCATTGGTAATCCTCATCATTCGCATTTTCCAAGACAGAATCACACTGCCACTCCAGAGCAACAAGCCTTTATGCGTCTTCAAAGAGACCGGAAGATTCAGCAAAGACTGTTGCAGCGGCAGCAACAACAACAACAGCAAGAGCTTCCCGCATTAGGTGCATTGATGACACATGCCCAAACTCCTTCCCAGCTACCTGCATCATCTTCTGTGCAGAATGCTTACCAGAATTACCAACTGCTTCTCAGCCGAATTCATCCTAATTTCTCTCAGGCTCCCATTTGATGTAATTTCTTCTTCTTTTTCTTCCTCTCTTTTTTTTTCCTATTAATTTTTTTTTATAATGACAGAGGCTTTCGAGAATTTCGAGCACATGTTTTCTTTTGTGTAGTTTGTGTTTGCTTGCTTGATGGTTTTACTTGATGATCCTCTTTATCGGTAGAGTGTTTAATGGGAAAAAGAGAGCTAGAAGAGTAGATATGTTACTCTGCTAATAAAGTGTGACTGATATGTTGCGATCTTGAGAGGACAATCCCAATCTTGCGATCTTGAGATTAGACTTCGTTTGATAGGTGATTACCTGAGCGTTGCCTTTATAGCCTCCTTTTACGGTGCGACGGTTGGTCAACGTCAAAGTAAGCAGTTCTCAAACAAGTAATCTCAAATCACTCAGGTATTGAGGATTTAGTGTCTAATAATTTTAATGAAATTTACTTATGA

mRNA sequence

ATGAGTCCTCTCAAGCCACTGTGTGATACAGTCCGTAGAGTTGCGATGTCATTAATTTGGGGATGGGTAATGGTGCTTTCAGTGCTTGAAACGGTCAAGGCATTTGAGAAGGCAACAGGAAAGTGTGCAAAGAAAAGGTTCCAGCCTGGACAGAGTTCAGAGCATCAACGTCAGATGACGTTGCTAGAATCTGGTACCCCAGGAGTCCCTCCTTTTGGTGCTTTGAGTTCTGGCTTCACTAATCACTAACCAGACTGCTTCTCCACCTATTCAAGCATATGCTGGCCACCACCACCAACAACATCCGATGCCACAGCATTGGTAATCCTCATCATTCGCATTTTCCAAGACAGAATCACACTGCCACTCCAGAGCAACAAGCCTTTATGCGTCTTCAAAGAGACCGGAAGATTCAGCAAAGACTGTTGCAGCGGCAGCAACAACAACAACAGCAAGAGCTTCCCGCATTAGGTGCATTGATGACACATGCCCAAACTCCTTCCCAGCTACCTGCATCATCTTCTGTGCAGAATGCTTACCAGAATTACCAACTGCTTCTCAGCCGAATTCATCCTAATTTCTCTCAGGCTCCCATTTGATGTAATTTCTTCTTCTTTTTCTTCCTCTCTTTTTTTTTCCTATTAATTTTTTTTTATAATGACAGAGGCTTTCGAGAATTTCGAGCACATGTTTTCTTTTGTGTAGTTTGTGTTTGCTTGCTTGATGGTTTTACTTGATGATCCTCTTTATCGGTAGAGTGTTTAATGGGAAAAAGAGAGCTAGAAGAGTAGATATGTTACTCTGCTAATAAAGTGTGACTGATATGTTGCGATCTTGAGAGGACAATCCCAATCTTGCGATCTTGAGATTAGACTTCGTTTGATAGGTGATTACCTGAGCGTTGCCTTTATAGCCTCCTTTTACGGTGCGACGGTTGGTCAACGTCAAAGTAAGCAGTTCTCAAACAAGTAATCTCAAATCACTCAGGTATTGAGGATTTAGTGTCTAATAATTTTAATGAAATTTACTTATGA

Coding sequence (CDS)

ATGAGTCCTCTCAAGCCACTGTGTGATACAGTCCGTAGAGTTGCGATGTCATTAATTTGGGGATGGGTAATGGTGCTTTCAGTGCTTGAAACGGTCAAGGCATTTGAGAAGGCAACAGGAAAGTGTGCAAAGAAAAGGTTCCAGCCTGGACAGAGTTCAGAGCATCAACGTCAGATGACGTTGCTAGAATCTGGTACCCCAGGAGTCCCTCCTTTTGGTGCTTTGAGTTCTGGCTTCACTAATCACTAA

Protein sequence

MSPLKPLCDTVRRVAMSLIWGWVMVLSVLETVKAFEKATGKCAKKRFQPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTNH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14429.1Spo14429.1mRNA


Homology
[Close]
BLAST of Spo14429.1 vs. NCBI nr
Match: gi|902210851|gb|KNA16554.1| (hypothetical protein SOVF_088110 [Spinacia oleracea])

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-8
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQSSEHQRQMTL ESG+PGVPPFGALSSGFTN
Sbjct: 1399 RPGQSSEHQRQMTLPESGSPGVPPFGALSSGFTN 1432
[Close]
BLAST of Spo14429.1 vs. NCBI nr
Match: gi|731347499|ref|XP_010685017.1| (PREDICTED: uncharacterized protein LOC104899514 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 60.8 bits (146), Expect = 1.200e-6
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQ+S+HQRQM L ES +PGVPPFGA+SSGFTN
Sbjct: 1417 RPGQNSDHQRQMMLAESSSPGVPPFGAMSSGFTN 1450
[Close]
BLAST of Spo14429.1 vs. NCBI nr
Match: gi|870853759|gb|KMT05626.1| (hypothetical protein BVRB_7g167650 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 60.8 bits (146), Expect = 1.200e-6
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQ+S+HQRQM L ES +PGVPPFGA+SSGFTN
Sbjct: 1414 RPGQNSDHQRQMMLAESSSPGVPPFGAMSSGFTN 1447
[Close]
BLAST of Spo14429.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC07_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088110 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.100e-9
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQSSEHQRQMTL ESG+PGVPPFGALSSGFTN
Sbjct: 1399 RPGQSSEHQRQMTLPESGSPGVPPFGALSSGFTN 1432
[Close]
BLAST of Spo14429.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERC4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167650 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.700e-7
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQ+S+HQRQM L ES +PGVPPFGA+SSGFTN
Sbjct: 1414 RPGQNSDHQRQMMLAESSSPGVPPFGAMSSGFTN 1447
[Close]
BLAST of Spo14429.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVJ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167650 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.700e-7
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 1 

		  

Query: 48   QPGQSSEHQRQMTLLESGTPGVPPFGALSSGFTN 82
            +PGQ+S+HQRQM L ES +PGVPPFGA+SSGFTN
Sbjct: 1417 RPGQNSDHQRQMMLAESSSPGVPPFGAMSSGFTN 1450
The following BLAST results are available for this feature:
BLAST of Spo14429.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 3
Match NameE-valueIdentityDescription
gi|902210851|gb|KNA16554.1|1.0e-891.1hypothetical protein SOVF_0881... [more]
gi|731347499|ref|XP_010685017.1|1.2e-676.4PREDICTED: uncharacterized pro... [more]
gi|870853759|gb|KMT05626.1|1.2e-676.4hypothetical protein BVRB_7g16... [more]
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BLAST of Spo14429.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9RC07_SPIOL7.1e-991.1Uncharacterized protein OS=Spi... [more]
A0A0J8ERC4_BETVU8.7e-776.4Uncharacterized protein OS=Bet... [more]
A0A0J8BVJ6_BETVU8.7e-776.4Uncharacterized protein OS=Bet... [more]
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BLAST of Spo14429.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14429.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0050832 defense response to fungus
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0000165 MAPK cascade
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009657 plastid organization
biological_process GO:0016024 CDP-diacylglycerol biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0005986 sucrose biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010200 response to chitin
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0015976 carbon utilization
biological_process GO:0008152 metabolic process
biological_process GO:0007389 pattern specification process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0048653 anther development
biological_process GO:0009926 auxin polar transport
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0008361 regulation of cell size
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010015 root morphogenesis
biological_process GO:0006412 translation
biological_process GO:0048481 plant ovule development
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0030001 metal ion transport
biological_process GO:0015995 chlorophyll biosynthetic process
cellular_component GO:0000785 chromatin
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0048046 apoplast
cellular_component GO:0005840 ribosome
cellular_component GO:0009579 thylakoid
molecular_function GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity
molecular_function GO:0050278 sedoheptulose-bisphosphatase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0043023 ribosomal large subunit binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0003677 DNA binding
RNA-Seq Expression