Spo03362 (gene)

Overview
NameSpo03362
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01141 : 170380 .. 172949 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAATAATAGAACAAAAGGTATGAACAAATAAAACAAAAAGTATGAACAATTTCATTATGAACATTAAGAAGATGATTATTATGAACAAACAAATAAACAAGCAAGGACAAACAATTCAACAAAAAAGAACAACCAATATAAAAAAGAACATACCAGAAGAAAGAACAAATAATACAACAATTATGAACAATTTTATGATGAATTTAAAAAACCAACATGAAAGAACACACAAAGAAAGAACAAACAATACAAGCAATTGTAAAAACATAAAAGAAAAATGAAGACCTTAGTTTCATTATGAACATTTATTATGAACAAACAGATAAACAAGAAAGAACAAATAAATAAGAAAGAACAAATAATTCAACAAAAAAGAACAAACAATATAAAAAAACATAAAATTCCAGAAGAAAGAACAAACAATTCAACAAATTATGAACAATTTTATGATGAATTTAAAAAAAACATTGAAGAACAAACAGTACAACAAGAAAGAACAAATAATATAAGAGCGTCAAACAATACAGGCGCATCGTTTTTTGGAGGTACAACAGTTAGGGGTTAACCTATCATAACTAATGGAATTATAGAAATAGAAATAATATTGTAGAACCAATGCATCTAATAGTAACATTACGAACTACTAGTAGTAATCTACCAAATTCATTTCAAAGAGCTTAATGTCTCAACTAATAACTAATTGCCAAAATAAAAAATAAAAAATAAAATTGTCTCAACTACCAAGGTAAAAGATTGTCCCAAAGTACAAGAACAACCCCCCACATTAAGGTCGGTGTAATATTTTCTGTTGATCAAAACTTCCTAACCAATAATTCAAACCTTAACTAATGTGGAGTATATAGGTTTAATCTTCATTCGAACTTGCTATTCAGAAAACTATATAAAAGTGGACAAATACCAAAAGAGTACAACCGAGTGTACTTGTACAGTTATACTCTTATACTCCGTAATGTGCAAGTGCCATACTATAAAGGTTATTATTTGTCCATAGCTTATGATTTTTGAGCAAATGTGCAAAACAAATCCTTGGTCCATTGTATGGTGAGCATCTCTCATTTAAATTTGCAATTGGAAGACATAATTGTTCTTTGAGTTACTTATATACAAAGTGCATAGATACCAAAAAGTTACATTACGCCACAACTTAAGATGGATGCTAAACCTTTCATCAGTCCTAACCATTTTCCGTAGTACCTATGTAATACGAATTTTTTTTTTTTTTTGGATGAAGACAAGTGACATGTAAGTTCATGATCATGAAAGCTAAATTTTTTACATGGAAAGCTATAAGAGAATGACAACTCAATAAGTGTTATCGACTTTCTTAACCATCTACTTCCTCCGTCCCTTTTTATTTTTTACATATTTCGTTTTGTTGTCCCGTTATAATCTTTATATTTGATATATTTCCTTTTATATTATATCATAAATACCCTTAATATTCTATCAAAATTATGTCAAATGATTATTTTAATTAATTAAATTCATCCCAGTGAGTTATTAAAATTTCTCACAATTCCCCAATGTCCGAGTTTTAATCGTTAAATTGCGGCATTATACAAAACATAAATAAGAAAAAGAGTTGGAGGGAGTAATATTTTTGAACAAATCTTAACTATCTTAATTGTACATTCAAAATTCAGTCACATAGTAAAAGAGAGAATAAATAAGACCATTGCTACATGAACTTAAGCAAATAAGTTAACTAACTACACAGTACGGAGTATAAAGAACGCTTTACCCAATTCTGCCGGTAATACGAAATGATGCCAAACTTATATTACTTCGAAATCTTAGATTATGTTTCATTTGACTTATGTTGATTATATTTATCCGAACTTATTTTATTTTGTGAAGTATTCTGGCTTGATAAACTTTTTGTGTATAAAAGTGTCGGAATGGATTAGTCATAGTTGTCACATGTTTTTTTCCTTTTATTTTTTAAATAAACAAAGATTACCTCATATGCTCTCCACGTGTGCACGTCTTATTTGCCACATGTATTTTCATATCTCCTTTTTTCTCTCTCTTCTTGAATATCCGTATTTTCTTTAAAATCAAATTAATATTTTACCTCTCACTGTTTTTCAAAATAATAAAATAAAAAACACTGACCGGAACAGATACCTGCGAATATCTTCACCGGAATTTCCATTTTCTCTTTTAGAGAGAGAAACTGAAAAACTCTGCAATTCAATCACCCAAAAAATCAAAATTAGGGTTTACTTTACCTCCATTTAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

mRNA sequence

ATGCTCAATAATAGAACAAAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

Coding sequence (CDS)

ATGCTCAATAATAGAACAAAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

Protein sequence

MLNNRTKAQKSSLFFPSKIQTLLLSHNSSLKIQPLLFFVASSVSFSVLFATLFPPHKFSSIFEYEEASSSSSIPSHTKKEEVKAQSRIFKNKNKNKGFFVFLGNLPK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03362.1Spo03362.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo03362.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03362.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03362.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03362.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0009651 response to salt stress
biological_process GO:0006457 protein folding
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0007165 signal transduction
biological_process GO:0015979 photosynthesis
biological_process GO:0009553 embryo sac development
biological_process GO:0050983 obsolete deoxyhypusine biosynthetic process from spermidine
biological_process GO:0008612 peptidyl-lysine modification to peptidyl-hypusine
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009414 response to water deprivation
biological_process GO:0009658 chloroplast organization
biological_process GO:0043090 amino acid import
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0042908 xenobiotic transport
biological_process GO:0010207 photosystem II assembly
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016556 mRNA modification
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006612 protein targeting to membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0034038 deoxyhypusine synthase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo246750.80Barchart | Table
Spo180800.80Barchart | Table
Spo199380.79Barchart | Table
Spo212150.79Barchart | Table
Spo029180.78Barchart | Table
Spo095540.77Barchart | Table
Spo266100.76Barchart | Table
Spo102840.76Barchart | Table
Spo154610.76Barchart | Table
Spo243250.76Barchart | Table
Spo259850.76Barchart | Table
Spo084070.75Barchart | Table
Spo233320.75Barchart | Table
Spo108350.75Barchart | Table
Spo019250.75Barchart | Table
Spo266970.75Barchart | Table
Spo006770.75Barchart | Table
Spo010540.74Barchart | Table
Spo244250.74Barchart | Table
Spo028900.74Barchart | Table
Spo153170.74Barchart | Table
Spo240460.74Barchart | Table
Spo185780.74Barchart | Table
Spo149140.74Barchart | Table
Spo059150.73Barchart | Table
Spo161880.73Barchart | Table
Spo190180.73Barchart | Table
Spo259870.73Barchart | Table
Spo026960.73Barchart | Table
Spo053070.73Barchart | Table
Spo069530.73Barchart | Table
Spo089350.73Barchart | Table
Spo108980.73Barchart | Table
Spo211440.73Barchart | Table
Spo194310.72Barchart | Table
Spo010570.72Barchart | Table
Spo178600.72Barchart | Table
Spo137880.72Barchart | Table
Spo251960.72Barchart | Table
Spo084780.72Barchart | Table
Spo139810.71Barchart | Table
Spo249130.71Barchart | Table
Spo233270.71Barchart | Table
Spo016280.71Barchart | Table
Spo251070.71Barchart | Table
Spo162400.71Barchart | Table
Spo169960.71Barchart | Table
Spo228110.71Barchart | Table
Spo158430.70Barchart | Table
Spo083510.70Barchart | Table
Spo042000.70Barchart | Table
Spo056530.70Barchart | Table
Spo002560.70Barchart | Table
Spo273640.70Barchart | Table
Spo012170.70Barchart | Table
Spo250080.70Barchart | Table
Spo115240.70Barchart | Table
Spo116880.70Barchart | Table
Spo235490.70Barchart | Table
Spo035720.69Barchart | Table
Spo264300.69Barchart | Table
Spo093870.69Barchart | Table
Spo238530.69Barchart | Table
Spo061640.69Barchart | Table
Spo115580.69Barchart | Table
Spo054020.69Barchart | Table
Spo033100.69Barchart | Table
Spo233820.69Barchart | Table
Spo026650.69Barchart | Table
Spo129540.69Barchart | Table
Spo093350.69Barchart | Table
Spo097690.69Barchart | Table
Spo097980.69Barchart | Table
Spo225830.69Barchart | Table
Spo102350.69Barchart | Table
Spo198360.69Barchart | Table
Spo031990.69Barchart | Table
Spo041230.68Barchart | Table
Spo246300.68Barchart | Table
Spo180630.68Barchart | Table
Spo012520.68Barchart | Table
Spo201060.68Barchart | Table
Spo177260.68Barchart | Table
Spo230760.68Barchart | Table
Spo135070.68Barchart | Table
Spo220040.68Barchart | Table
Spo166430.68Barchart | Table
Spo211550.68Barchart | Table
Spo152150.68Barchart | Table
Spo142250.67Barchart | Table
Spo019830.67Barchart | Table
Spo025730.67Barchart | Table
Spo027300.67Barchart | Table
Spo029790.67Barchart | Table
Spo036380.67Barchart | Table
Spo079410.67Barchart | Table
Spo081140.67Barchart | Table
Spo094340.67Barchart | Table
Spo104910.67Barchart | Table
Spo105250.67Barchart | Table
Spo128430.67Barchart | Table
Spo152220.67Barchart | Table
Spo179470.67Barchart | Table
Spo200500.67Barchart | Table
Spo208370.67Barchart | Table
Spo233180.67Barchart | Table
Spo237120.67Barchart | Table
Spo237450.67Barchart | Table
Spo064530.66Barchart | Table
Spo158810.66Barchart | Table
Spo010680.66Barchart | Table
Spo155240.66Barchart | Table
Spo206480.66Barchart | Table
Spo093810.66Barchart | Table
Spo243310.66Barchart | Table
Spo087130.66Barchart | Table
Spo086540.66Barchart | Table
Spo080970.66Barchart | Table
Spo247360.66Barchart | Table
Spo071490.66Barchart | Table
Spo021060.66Barchart | Table
Spo259880.66Barchart | Table
Spo173200.66Barchart | Table
Spo160790.66Barchart | Table
Spo194570.66Barchart | Table
Spo005260.66Barchart | Table
Spo153650.66Barchart | Table
Spo152110.66Barchart | Table
Spo149380.66Barchart | Table
Spo212540.66Barchart | Table
Spo213830.66Barchart | Table
Spo146300.66Barchart | Table
Spo224510.66Barchart | Table
Spo139050.66Barchart | Table
Spo230350.66Barchart | Table
Spo231240.66Barchart | Table
Spo270810.66Barchart | Table
Spo131710.66Barchart | Table
Spo131610.66Barchart | Table
Spo123540.66Barchart | Table
Spo119600.66Barchart | Table
Spo002140.66Barchart | Table
Spo282670.66Barchart | Table
Spo206510.65Barchart | Table
Spo133930.65Barchart | Table
Spo100920.65Barchart | Table
Spo011350.65Barchart | Table
Spo159950.65Barchart | Table
Spo038960.65Barchart | Table
Spo029320.65Barchart | Table
Spo169600.65Barchart | Table
Spo170240.65Barchart | Table
Spo002050.65Barchart | Table
Spo079800.65Barchart | Table
Spo114170.65Barchart | Table