Spo20387 (gene)

Overview
NameSpo20387
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSec-independent protein translocase protein TATA, chloroplastic (Protein THYLAKOID ASSEMBLY 4) (Protein TWIN-ARGININE TRANSLOCATION A) (Precursor)
LocationSpoScf_01169 : 74086 .. 79998 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTCGAGATAGCAAGTCAAACACTTCCTAAAACAAGAAAAGAAGCCATAAACTCCATAGACTCTTATCCATCATCATCGTATTTTTTACTAGACCTCAAAAACTCACCAAAACCTTCTCAAAAATGGAGATCTTAACGCTCTCAGCTACTCTTTCTCTCTCCTCCTCCCAAAACCCCACACACCTTTCTTCCTCTAAATCCTCCTTATTCCTCAATCACACCACCACCACCGCGTTCTTCAGATCCGTCAACACAACGGGCCTGGGCTTGAGTGCCCGAACCCGTCCTACTAACCGAACTCGGAGGGGGTTCTGTTGCAACTCGTTGTTTGGGCTTGGTGTTCCGGAGCTCGCGGTCATCGCCGGTGTTGCGGCTCTTGTGTTTGGCCCCAAACAGTTACCGGAAATTGGCCGGAATTTCGGCAAAACCATCAAAAGTTTTCAACAGGTTAGTCAACCACATTTCAACTTGTTTTTTTTAATTTTTTTTTTTCTAAAGTATTTTATTCTTCAATTCTAAGGTAGCTGATAATTTTTCAATCTATTGTTTTATTGTTTATGATGTGTTTTTGAAGTGACTTCTGGAAATTGTCTAATTGATGAATGAGATGAATTAATATTTAATAGTGTCCAAATTGATGACCCGAATTTGATGTGAGCTAAAGTTTGGATGCGGAATGTGGTATGTTACCGAAAACCGAAATCAGTTCTATTATGATGGAGTTGTTTGAGGTATTTAGGAATGTTTGGGTAGAGGTAGGATATTGGTGCTTGAACTGCTTGGTTAATCAGTTTTGTAATATTGCTATGATAGGTGTCTATGTGTCAATCATTGTAGGAAGAATTAGAAAAATTAGAGACAGAGAAAGCAGCATTCTTGAAGCTAGTTGGTACAAAATTAATGGTACTGGTGTTGTGGGAATAATTAGAAATTAGAGATAGAGAAGGCATTGTAATCCTTGGTTGCCGAATTAATGGTACGTTTACTTGAATCAGTAATATGACAATTAAATACAGACGTAGGGAGGGAGCATTTGAATTTCTGTTTAGTTAGAGAAATCTGTCTTCTTTTAATTTATTTCTGGAGGTTGAGAAACTTGTATACACTAGGGCACAACCTCTCTTATTGTATTCGCAAGTCCATACATATTATGGGGAAGGGATCCGAAGTTGATCCGTGTTGAAGCCCTATATCAATAGAGCTTTTGCTTGATATGTCCACATGTCATTCTCATTCTACTCTTGGCACTGTTAACTCAAATACATGCAGTTGGAAATTTGGAATGCCCTTGGCCACTAGACACCTTCACATTTTTCTTGGTCCATTGTCATAAAACCATGTACATTTGTTTATCCTTGTTCTTTCATTAAAAGCATCTTAAGAAATGTATGACTTCCATATACGATATACCTTGCATCAATTAAATCTACTTGTAGATGTGTTTATACCTATTGTACTTCTGTTATGCTTCTTCAGAAATGTATGGCTTCCATATAGGATCTACCTTTCATGAAACCAGATCTTAGTTTTAAAAAGCGCGAAGCGCAACGAAGCGCAAAAGGGCCCGGGAGCTTAAGCGCAAAGCGAAAGTGCACGCTTTTCGTAGGCGAAGCGCACTCGGAAAGAAATAATAAAATTTCAAAACTTCGGAAATCATGGAGAAAATATGGAAAGAAAAGATGAAAAAAAAAAAATCGAAAAGATGAAAGAAAAATTCAGAATTGACTGGAGAAATCCAACGAGAAGGCTAGAGAAATCTGGCTACGGGAGAAAATTGCACTAGAGTTTTCAAAACCCCCCAAACATTCTCTTTTTAAAAAAAAGAAATCATGTGATACTTTAAAAAAGAAGATTAGAGTTACTTGGCTTTATTTTTTAATTAAAAAGAAGAGTTTGTTGTGCCCAGACTACAGGAAGCGCAGCTTTGCGCTGCTTCCTGTATGTCGCTAAGCTTCTGCTGCCAGAAACGTTCTTTTGTGAGCTTCCGAGCTTCCAGGACTTTAAGCGCGCTTTTTAAAACTAAGAACCAGATACCCCTTATCTTTCTCTTCTCTAATTCTTCGCCGTTCTTTTGGATAATTTTTTTGGTTTATCCCCCAACAGTTTTTAGTATTAGAAAGAGGCTCGAGAACTTATAGGGAATCATTGGTGGTATGAACATGAGAGATAAAAGGGAACTCTACAGTTTTCTAATGTTGCAAAAGTAGAAAAGGTTACGGACTAAGAAAATTATTCTTGGTAACGAGGCAAAGGAAACAGTTGTAAAAGCTTGAAAGAGAGCGTAGTAGTAGACCAAAAAGGATAAAAGAACTTATATAGGGTGCAAAGGGCTAGGGAGTGAAAATCAAGGAACTTTGATAAAGTAAAGTTGTATAAAAAATGAAGTAGGAAGATTCTTGTGGATGAGCCATTGAGGTCAACTATCAAAGAAAAGTAAAAAGATGTACTTTTATTAGCTTTCCGATGGATCAGGGAGAGAAACATTTGCTTGGAAGAGCTCAATGAATCTGGAACTACAGTTTTTTCCCTTATACTACGAGGAAAGAAGTCAAAGAAGGTGAAGTTAAACAAAGTGGGACGTCAGTAGGATCTAATGATAGACCCATAGAAATATTAGGTGAAGAAGGCATTACATGGCCAACAAAGCTTTAAAATATTATTTTAGGGTTGACATTATACGTCGGCTTTACGTTATAATTCCTTCATACAAGATTAAGAGGGGAGTTCAAAGTGGTTGCAGGCTAGCAGCTATAAGGGTTATGAAGTTACTCAACCATATGAGAAAATAACCTGGATCCGGACATGTTAGTTAAGAAATTGTAGCCTTGGGAAACATTTCTGTGTATTGAGAGTGTAAACATCTCATGGGGGATTAGTTAAAAACTGGGAACAAAATTATAGTATAGGGATATCCGGACATGGCTGAACTAGTCTAGTGTGTGTCAAGATAAATATGTGTTGGATCGGTGAAAAGGGGGAAAACTGCTACAGTCTTCTCAAAGTGTGGGGCGTTCCGCATTCATGACACAGATTAGATCAAGACCCATGATCTTTTGGCTTATTTAAGTTGGCAATATCTTGGGCTCACTTAAAGTCTAAAATTCTGGAAGAAAACCCTATTTTAGTGATCGAGAATATTGTCGATAGTGTAAGTTTTCATCATATAAGATCTATAATATTTAAGATTCAGAAGTAGGTATTCTTGGACTTCATTCTTTCACAAATGAAAAGAAAAGCAGCTTTTCATGCAGTATTAACACCAACTGGAGGGTTTTTTTTTGAGAGCGATGAATCAGGTGATTAGGAAGAATGCGGGAGTTACAATGATTGAGAACTAGATGAAGGAGAATCGACTAAGGTGGTTTGGCAATGGAAGACGAAAGTCAAATGATGCGCTGGTTAGAACGATTGAAGAGTAGCAAATGGATGGAATTGTGAGGGGTAGGGGAAGACCAAAGCAAAAATGGAAGAGGGTGATTGAGAGTGATATGAGTTCATTGGGGATTGAGGAAAATATGGCGTTAGATAGGGCGGGGTGGAAGGAGATAATACATGCCGATGACTCAACATGACTTCTTTTCCATCTCTTGCTCTTTTTCTATTTTAATTGAAAACTTCTCTCTTTTTCTTATTTTTTTCAAAACATTTTTAGCCTCTTCTTTAAACCGTCCTATCCTATTTTGCAAAGATTGACTTCCAACTGCTTATTCCATGAGAATGCATCTTGTGCTCCGGCAACCCAATCTTCCTTATCATACCTCTATATCTACCTTGGCTTGAAGTTCCCATTTTTGGTATGGATAAGACCTAACTGAAACCCTTTTGTTTCTCTTTGCTACCCTTTGGAAGTCGCTTTTCTGTCCTCTCAAATTTGTGTGCGACACTGGTCGGAATAGTGAACAAGGACTTGAAATGCCTGCACTATGCTAGTTAAAGTATTCCCTTTTAGTAATAGCTTATTTTCATCTTGAAAGCCACTTTTTAAATCCCTTTAGTCCTATATTGTCAGATACCTGATCAATTTGTCACTAAGTAGGCATTAAGAGTAAGATGAAAAGGTTATCACATTCTAACTAGGAATCAAATCTTCCTAACTGTGTCTTGATATGACGTATTTAAATACATACTAGCTTCATTTGTTTCTTTAAGCGTGAGTAGCTATTGTGATTGGATAAAGATATAAATTTTCCTGTTCTCTTTCTTTTTCGCTAAAGGGCACTTAGCCTTTGCACTAGTTCAGGCATTGGTGGGTCTTGGCACAAGGACCCTTTGCAAGGTTGTTTCCTGTCTTGGTCCTTAAACCCAGCTGATTACTGCCTCCAGTTGAAGCAAAGAAAATTTATTTTTTGAGTCTGCATTTGGTATTACAGCTCAATGGTTCCAGGCCATCACCAGATTAGAATTAAGCATTGGGCAAATAGCAGTCGCACCATCTTTGTCCAAAATCTGTAAAAATGATAATTTTGAGGTTGTTTAACCTTATCCAGAATCTGTTCAAGGTATGTGAAACTGGGAAACTGATTTGTATGCTCAGGTATACTCCGTAAGATACAAGTATAATTTACTGGTTTTTGCGAGTTGGAATAAGGGGATGTGAATATAACTCTTTATTGTTGTTGTTAGGTCTGTGGCTTAATTTGAAGTTTGTTTTATTTGCATACTAAGCAGTCATTTATTGTTTAAGGACCTTCTCCTTGGTTACACGGTTATACCTTTACAAAATTGCTATTTTTTTTATTTCAATGATTCTAACATCCATATGTTAATTGGCTTCCTTTCCATTCGCAAGAATTTACTATTTTCATCTCATGCTTTGATTTGACATGCTAGGATGCTTAGCTTGAAACTTCCACCTTTTTGTTTCTTTTCCGTTGACTTGACAGATGTTAGGGAGGTAGTCTATGCAAATACGCCGGAGTTCACTGTGTATTGATTTTGATCATTTGGTGTCTGCCTTGTTGGTTTCTTGTATTTTTTTGTACGTCTAACAAAAGCTAATGAATATCAGTTACCAATTTGAAAGGGTTCTTGCTTCTTGCCTTTTCTTTCTTTCTCCCCCTTTTTTCGTATGAGGTGTTTTTTATGCTATGGTGCCAACAATTGCTGAGTTGATAGGATGAATTGTTCTTCATTTTGTTCATTGTGCATGTTAAGAGTTTCTGAACCCTGATCACTTTTAAGTCCTCTGTTCACATACAAAATATTACAGGCCGCAAAGGAGTTCGAACAGGAACTTACAAAACCAGAAGACTCTGAGTCTTCTGACAAGGTGATTGAGGCAAAATCAGCATCAGAAAGTTCAGAAGAAAAAGAAAATGTTGCATCGTCGTCTAAAGAGAGTTCTTGAGATTATTCATGTATTTTTTCTTCCACTTCATTTAATCCGAATTTTTTTCTTGTATTCGTGACGGCCAATGTGATGGTATGTATAATCGAATACTTGTGTAAGAGTTCCGTTCATATCAAGCGCAATTTAGCAAATTAGCAATTAGGCATTAACAGTATTAGAAGAATTTATTTTTGAAGAAGATGGTATATCGACATGCCGTCAAGTCAACAATAAAGATGTGTTAAACCACTTCGTATGTTTATGGATGTGTTCACAAGTCTCGGAGTAGGTGTGCAAATGTGCCACCTTTAAACCAAATGCATAAATCAAGATTAATAACAGGTCGGAGACACTAGTTCCGGCAATTACCCTATCCATCCAGAACTAACCGGGTATATTTTTTTTGGGACATAAGGCAGAACTAACTGTTACACTATCCTAACCTTTCATAATCAAAGTTGACTACATCACTTTATTTTAAACAAAATATAAAAAGGCCAGGTGTATGGAGTAGGATCAGAAATTCATAATATATTTCCTCTGTTCTTTTTACTTGTACCATGTAGGTTGGATACAAATAT

mRNA sequence

ATATTTCGAGATAGCAAGTCAAACACTTCCTAAAACAAGAAAAGAAGCCATAAACTCCATAGACTCTTATCCATCATCATCGTATTTTTTACTAGACCTCAAAAACTCACCAAAACCTTCTCAAAAATGGAGATCTTAACGCTCTCAGCTACTCTTTCTCTCTCCTCCTCCCAAAACCCCACACACCTTTCTTCCTCTAAATCCTCCTTATTCCTCAATCACACCACCACCACCGCGTTCTTCAGATCCGTCAACACAACGGGCCTGGGCTTGAGTGCCCGAACCCGTCCTACTAACCGAACTCGGAGGGGGTTCTGTTGCAACTCGTTGTTTGGGCTTGGTGTTCCGGAGCTCGCGGTCATCGCCGGTGTTGCGGCTCTTGTGTTTGGCCCCAAACAGTTACCGGAAATTGGCCGGAATTTCGGCAAAACCATCAAAAGTTTTCAACAGGCCGCAAAGGAGTTCGAACAGGAACTTACAAAACCAGAAGACTCTGAGTCTTCTGACAAGGTGATTGAGGCAAAATCAGCATCAGAAAGTTCAGAAGAAAAAGAAAATGTTGCATCGTCGTCTAAAGAGAGTTCTTGAGATTATTCATGTATTTTTTCTTCCACTTCATTTAATCCGAATTTTTTTCTTGTATTCGTGACGGCCAATGTGATGGTATGTATAATCGAATACTTGTGTAAGAGTTCCGTTCATATCAAGCGCAATTTAGCAAATTAGCAATTAGGCATTAACAGTATTAGAAGAATTTATTTTTGAAGAAGATGGTATATCGACATGCCGTCAAGTCAACAATAAAGATGTGTTAAACCACTTCGTATGTTTATGGATGTGTTCACAAGTCTCGGAGTAGGTGTGCAAATGTGCCACCTTTAAACCAAATGCATAAATCAAGATTAATAACAGGTCGGAGACACTAGTTCCGGCAATTACCCTATCCATCCAGAACTAACCGGGTATATTTTTTTTGGGACATAAGGCAGAACTAACTGTTACACTATCCTAACCTTTCATAATCAAAGTTGACTACATCACTTTATTTTAAACAAAATATAAAAAGGCCAGGTGTATGGAGTAGGATCAGAAATTCATAATATATTTCCTCTGTTCTTTTTACTTGTACCATGTAGGTTGGATACAAATAT

Coding sequence (CDS)

ATGGAGATCTTAACGCTCTCAGCTACTCTTTCTCTCTCCTCCTCCCAAAACCCCACACACCTTTCTTCCTCTAAATCCTCCTTATTCCTCAATCACACCACCACCACCGCGTTCTTCAGATCCGTCAACACAACGGGCCTGGGCTTGAGTGCCCGAACCCGTCCTACTAACCGAACTCGGAGGGGGTTCTGTTGCAACTCGTTGTTTGGGCTTGGTGTTCCGGAGCTCGCGGTCATCGCCGGTGTTGCGGCTCTTGTGTTTGGCCCCAAACAGTTACCGGAAATTGGCCGGAATTTCGGCAAAACCATCAAAAGTTTTCAACAGGCCGCAAAGGAGTTCGAACAGGAACTTACAAAACCAGAAGACTCTGAGTCTTCTGACAAGGTGATTGAGGCAAAATCAGCATCAGAAAGTTCAGAAGAAAAAGAAAATGTTGCATCGTCGTCTAAAGAGAGTTCTTGA

Protein sequence

MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPEDSESSDKVIEAKSASESSEEKENVASSSKESS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20387.1Spo20387.1mRNA


Homology
[Close]
BLAST of Spo20387.1 vs. NCBI nr
Match: gi|902234235|gb|KNA23378.1| (hypothetical protein SOVF_024920 [Spinacia oleracea])

HSP 1 Score: 271.6 bits (693), Expect = 8.700e-70
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

		  

Query: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60
           MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR
Sbjct: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60

Query: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120
           RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP
Sbjct: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120

Query: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 154
           EDSESSDKVIEAKSASESSEEKENVASSSKESS
Sbjct: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 153
[Close]
BLAST of Spo20387.1 vs. NCBI nr
Match: gi|731328033|ref|XP_010674831.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 200.3 bits (508), Expect = 2.500e-48
Identity = 122/153 (79.74%), Postives = 127/153 (83.01%), Query Frame = 1 

		  

Query: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60
           MEI TLS +LSL S Q PT LSSSKSS   +     + FRSVNT GLGL AR RP  R R
Sbjct: 1   MEISTLSPSLSLPSFQKPTLLSSSKSSSLFS----ISLFRSVNTKGLGLRARVRPAYRAR 60

Query: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120
           +G  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP
Sbjct: 61  KGLTCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120

Query: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 154
           E+ ESSD VIEAKSASESSEEKENV SSSKESS
Sbjct: 121 EEPESSDNVIEAKSASESSEEKENVVSSSKESS 149
[Close]
BLAST of Spo20387.1 vs. NCBI nr
Match: gi|1009117521|ref|XP_015875362.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 112.1 bits (279), Expect = 8.800e-22
Identity = 75/147 (51.02%), Postives = 94/147 (63.95%), Query Frame = 1 

		  

Query: 7   SATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRP-TNRTRRGFCC 66
           S TLS+        LSSS+SS   N+ T T+              RTRP T R ++G  C
Sbjct: 5   SITLSIPRPPPYLPLSSSQSSFLTNNVTCTSLLNRNKAINGAFQIRTRPRTQRAKKGLTC 64

Query: 67  NSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPEDSES 126
           N+LFGLGVPEL VIAGVAALVFGPK+LPE+G++ GKT+KSFQQAAKEFE EL K  D  S
Sbjct: 65  NALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD--S 124

Query: 127 SDKVIEAKSASESSEEKENVASSSKES 153
            +  ++  +A    E+++   SSSKES
Sbjct: 125 IEPPVDKPTAVSEEEKQDVKVSSSKES 149
[Close]
BLAST of Spo20387.1 vs. NCBI nr
Match: gi|922561626|ref|XP_013609121.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like [Brassica oleracea var. oleracea])

HSP 1 Score: 110.9 bits (276), Expect = 2.000e-21
Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = 1 

		  

Query: 6   LSATLSLSSSQNPTHL--SSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGF 65
           ++ +++  SS  P  L  SSS+SSLF N  T T   ++ +     L AR RP  R R+  
Sbjct: 1   MATSVATLSSPPPVSLPLSSSRSSLFSNCFTVTTRPKTRS-----LVARIRPEQR-RKAL 60

Query: 66  CCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPED 125
            CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PED
Sbjct: 61  TCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPED 120

Query: 126 SESSDKVIEAKSASESSEEKENVASSSKES 153
           S +    +   + S  +EEK  V SSSKE+
Sbjct: 121 SVAGSSPV---AMSNKAEEKTEVLSSSKEN 141
[Close]
BLAST of Spo20387.1 vs. NCBI nr
Match: gi|15241912|ref|NP_198227.1| (sec-independent protein translocase protein TatA [Arabidopsis thaliana])

HSP 1 Score: 108.6 bits (270), Expect = 9.700e-21
Identity = 78/149 (52.35%), Postives = 98/149 (65.77%), Query Frame = 1 

		  

Query: 5   TLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGFC 64
           T  ATLS     +   LSSS+SS F N  T T    + +   +G   R  PT   R+   
Sbjct: 3   TSVATLSSPPPVSLPLLSSSRSSFFSNCFTVTTRPNTRSLVAIGRRIRQEPT---RKPLT 62

Query: 65  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPEDS 124
           CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PE+S
Sbjct: 63  CNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEES 122

Query: 125 ESSDKVIEAKSASESSEEKENVASSSKES 153
            +    +   +  E  E+K  V+SSSKE+
Sbjct: 123 VAESSQVATSNKEE--EKKTEVSSSSKEN 146
[Close]
BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV82_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024920 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.000e-70
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

		  

Query: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60
           MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR
Sbjct: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60

Query: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120
           RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP
Sbjct: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120

Query: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 154
           EDSESSDKVIEAKSASESSEEKENVASSSKESS
Sbjct: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 153
[Close]
BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNI1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g081850 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.700e-48
Identity = 122/153 (79.74%), Postives = 127/153 (83.01%), Query Frame = 1 

		  

Query: 1   MEILTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTR 60
           MEI TLS +LSL S Q PT LSSSKSS   +     + FRSVNT GLGL AR RP  R R
Sbjct: 1   MEISTLSPSLSLPSFQKPTLLSSSKSSSLFS----ISLFRSVNTKGLGLRARVRPAYRAR 60

Query: 61  RGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120
           +G  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP
Sbjct: 61  KGLTCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKP 120

Query: 121 EDSESSDKVIEAKSASESSEEKENVASSSKESS 154
           E+ ESSD VIEAKSASESSEEKENV SSSKESS
Sbjct: 121 EEPESSDNVIEAKSASESSEEKENVVSSSKESS 149
[Close]
BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Match: A0A0D3E0Z8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.400e-21
Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = 1 

		  

Query: 6   LSATLSLSSSQNPTHL--SSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGF 65
           ++ +++  SS  P  L  SSS+SSLF N  T T   ++ +     L AR RP  R R+  
Sbjct: 1   MATSVATLSSPPPVSLPLSSSRSSLFSNCFTVTTRPKTRS-----LVARIRPEQR-RKAL 60

Query: 66  CCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPED 125
            CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PED
Sbjct: 61  TCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPED 120

Query: 126 SESSDKVIEAKSASESSEEKENVASSSKES 153
           S +    +   + S  +EEK  V SSSKE+
Sbjct: 121 SVAGSSPV---AMSNKAEEKTEVLSSSKEN 141
[Close]
BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Match: A0A078EL12_BRANA (BnaC09g02780D protein OS=Brassica napus GN=BnaC09g02780D PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.400e-21
Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = 1 

		  

Query: 6   LSATLSLSSSQNPTHL--SSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGF 65
           ++ +++  SS  P  L  SSS+SSLF N  T T   ++ +     L AR RP  R R+  
Sbjct: 1   MATSVATLSSPPPVSLPLSSSRSSLFSNCFTVTTRPKTRS-----LVARIRPEQR-RKAL 60

Query: 66  CCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPED 125
            CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PED
Sbjct: 61  TCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPED 120

Query: 126 SESSDKVIEAKSASESSEEKENVASSSKES 153
           S +    +   + S  +EEK  V SSSKE+
Sbjct: 121 SVAGSSPV---AMSNKAEEKTEVLSSSKEN 141
[Close]
BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Match: B9I5F5_POPTR (Thylakoid assembly family protein OS=Populus trichocarpa GN=POPTR_0013s03820g PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.800e-21
Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 1 

		  

Query: 7   SATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNT-TGLGLSARTRPTNRTRRGFCC 66
           S TLSL         SSS S+ F     TTAFF    +   L L   T  + R ++G  C
Sbjct: 7   SVTLSLPKPPRSLPFSSSNSTFF----NTTAFFNKTKSCNSLVLGKTTSGSQRAKKGLTC 66

Query: 67  NSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPEDSES 126
           N+LFGLGVPEL VIAGVAALVFGPK+LPE+G++ GKT++SFQQAAKEFE EL K  +SE 
Sbjct: 67  NALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVRSFQQAAKEFESELKKEPESEP 126

Query: 127 SDKVIEAKSASESSEEKENV-ASSSKES 153
                + K+  E  E+K++V  SSSKES
Sbjct: 127 ETPGEQPKAIIE--EKKQDVEVSSSKES 148
[Close]
BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Match: TATA_ARATH (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana GN=TATA PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.100e-23
Identity = 78/149 (52.35%), Postives = 98/149 (65.77%), Query Frame = 1 

		  

Query: 5   TLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGFC 64
           T  ATLS     +   LSSS+SS F N  T T    + +   +G   R  PT   R+   
Sbjct: 3   TSVATLSSPPPVSLPLLSSSRSSFFSNCFTVTTRPNTRSLVAIGRRIRQEPT---RKPLT 62

Query: 65  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPEDS 124
           CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PE+S
Sbjct: 63  CNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEES 122

Query: 125 ESSDKVIEAKSASESSEEKENVASSSKES 153
            +    +   +  E  E+K  V+SSSKE+
Sbjct: 123 VAESSQVATSNKEE--EKKTEVSSSSKEN 146
[Close]
BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Match: TATA_ORYSJ (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica GN=TATA PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.100e-19
Identity = 66/112 (58.93%), Postives = 76/112 (67.86%), Query Frame = 1 

		  

Query: 47  LGLSARTRPTN----RTRRGFCCNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKT 106
           + ++ARTR  +    R      C  LFGLGVPEL VIAGVAALVFGPKQLPEIGR+ GKT
Sbjct: 59  VAVAARTRAGSGAGSRGGGAMGCKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKT 118

Query: 107 IKSFQQAAKEFEQELTKPEDSESSDKVIEAKSA-SESSEEKENVASSSKESS 154
           +KSFQQAAKEFE EL K  D          ++A S+  EEKE  ASSSKES+
Sbjct: 119 VKSFQQAAKEFETELKKESDDGGDQPPPPTETAVSDGGEEKELEASSSKEST 170
[Close]
BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Match: TATA_PEA (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum GN=TATA PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.400e-19
Identity = 72/148 (48.65%), Postives = 93/148 (62.84%), Query Frame = 1 

		  

Query: 6   LSATLSLSSSQN-PTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGFC 65
           +  TLS+SSS   PT L +S  S + N     +F  S + T   L  + R   RT +GF 
Sbjct: 1   MEITLSISSSSVIPTRLPNS--SCYSN----LSFLSSNSNTSSLLLKKARIKTRTTKGFT 60

Query: 66  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPEDSE 125
           CN+ FGLGVPEL VIAGVAALVFGPK+LPE+GR+ G+T+KSFQQAAKEFE EL K  +  
Sbjct: 61  CNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKEPNP- 120

Query: 126 SSDKVIEAKSASESSEEKENVASSSKES 153
                 E  S +   E++E   SS+K++
Sbjct: 121 -----TEEISVASEQEKQEIKVSSTKDN 136
[Close]
BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Match: TATA_MAIZE (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=TATA PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.300e-19
Identity = 63/90 (70.00%), Postives = 68/90 (75.56%), Query Frame = 1 

		  

Query: 65  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPEDSE 124
           C  LFGLGVPELAVIAGVAALVFGPKQLPEIGR+ GKT+KSFQQAAKEFE EL K E  E
Sbjct: 82  CKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETEL-KKEPGE 141

Query: 125 SSDKVIEA-KSASESSEEKENVASSSKESS 154
             D+   A  +A    EEK   ASSSKES+
Sbjct: 142 GGDQPPPATPTAVSGGEEKGLEASSSKESA 170
[Close]
BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Match: TATA_SYNP6 (Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.300e-11
Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 1 

		  

Query: 67  SLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQELTKPED 123
           + FG+G+PE+ VI  +A LVFGPK+LPEIGR+ GK ++ FQ A++EFE E+ +  D
Sbjct: 2   NFFGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREID 57
[Close]
BLAST of Spo20387.1 vs. TAIR (Arabidopsis)
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 108.6 bits (270), Expect = 3.400e-24
Identity = 78/149 (52.35%), Postives = 98/149 (65.77%), Query Frame = 1 

		  

Query: 5   TLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGFC 64
           T  ATLS     +   LSSS+SS F N  T T    + +   +G   R  PT   R+   
Sbjct: 3   TSVATLSSPPPVSLPLLSSSRSSFFSNCFTVTTRPNTRSLVAIGRRIRQEPT---RKPLT 62

Query: 65  CNSLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFEQEL-TKPEDS 124
           CN+LFGLGVPELAVIAGVAAL+FGPK+LPEIG++ GKT+KSFQQAAKEFE EL T+PE+S
Sbjct: 63  CNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEES 122

Query: 125 ESSDKVIEAKSASESSEEKENVASSSKES 153
            +    +   +  E  E+K  V+SSSKE+
Sbjct: 123 VAESSQVATSNKEE--EKKTEVSSSSKEN 146
[Close]
BLAST of Spo20387.1 vs. TAIR (Arabidopsis)
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 53.9 bits (128), Expect = 1.000e-7
Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 1 

		  

Query: 4   LTLSATLSLSSSQNPTHLSSSKSSLFLNHTTTTAFFRSVNTTGLGLSARTRPTNRTRRGF 63
           +T S   S    Q+    S    S + +   ++ F   +    LG+S   + +N  ++  
Sbjct: 17  ITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISISPKSSNPEKKRR 76

Query: 64  CCN-----SLFGLGVPELAVIAGVAALVFGPKQLPEIGRNFGKTIKSFQQAAKEFE 115
           C +     SLFG+G PE  VI  VA LVFGPK L E+ RN GKT+++FQ   +E +
Sbjct: 77  CKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQ 132
The following BLAST results are available for this feature:
BLAST of Spo20387.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234235|gb|KNA23378.1|8.7e-70100.hypothetical protein SOVF_0249... [more]
gi|731328033|ref|XP_010674831.1|2.5e-4879.7PREDICTED: sec-independent pro... [more]
gi|1009117521|ref|XP_015875362.1|8.8e-2251.0PREDICTED: sec-independent pro... [more]
gi|922561626|ref|XP_013609121.1|2.0e-2154.0PREDICTED: sec-independent pro... [more]
gi|15241912|ref|NP_198227.1|9.7e-2152.3sec-independent protein transl... [more]
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BLAST of Spo20387.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RV82_SPIOL6.0e-70100.Uncharacterized protein OS=Spi... [more]
A0A0J8CNI1_BETVU1.7e-4879.7Uncharacterized protein OS=Bet... [more]
A0A0D3E0Z8_BRAOL1.4e-2154.0Uncharacterized protein OS=Bra... [more]
A0A078EL12_BRANA1.4e-2154.0BnaC09g02780D protein OS=Brass... [more]
B9I5F5_POPTR8.8e-2152.0Thylakoid assembly family prot... [more]
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BLAST of Spo20387.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TATA_ARATH6.1e-2352.3Sec-independent protein transl... [more]
TATA_ORYSJ1.1e-1958.9Sec-independent protein transl... [more]
TATA_PEA1.4e-1948.6Sec-independent protein transl... [more]
TATA_MAIZE5.3e-1970.0Sec-independent protein transl... [more]
TATA_SYNP65.3e-1153.5Sec-independent protein transl... [more]
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BLAST of Spo20387.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G28750.13.4e-2452.3Bacterial sec-independent tran... [more]
AT5G52440.11.0e-733.6Bacterial sec-independent tran... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416MttA_Hcf106coord: 71..121
score: 1.9
IPR006312Sec-independent protein translocase protein TatA/EHAMAPMF_00236TatA_Ecoord: 68..148
score: 17
IPR006312Sec-independent protein translocase protein TatA/ETIGRFAMsTIGR01411TIGR01411coord: 70..116
score: 1.8
NoneNo IPR availablePANTHERPTHR33162FAMILY NOT NAMEDcoord: 1..153
score: 8.3
NoneNo IPR availablePANTHERPTHR33162:SF1SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 1..153
score: 8.3

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009306 protein secretion
biological_process GO:0006457 protein folding
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0000096 sulfur amino acid metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0006508 proteolysis
biological_process GO:0000023 maltose metabolic process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0060003 copper ion export
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0009631 cold acclimation
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0010342 endosperm cellularization
biological_process GO:0000914 phragmoplast assembly
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006810 transport
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0006605 protein targeting
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0030091 protein repair
biological_process GO:0032259 methylation
biological_process GO:0009853 photorespiration
biological_process GO:0015031 protein transport
biological_process GO:0006464 cellular protein modification process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0048440 carpel development
biological_process GO:0016487 farnesol metabolic process
biological_process GO:0050665 hydrogen peroxide biosynthetic process
biological_process GO:0016926 protein desumoylation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010189 vitamin E biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0033617 mitochondrial respiratory chain complex IV assembly
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009409 response to cold
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0006788 heme oxidation
biological_process GO:0010024 phytochromobilin biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006825 copper ion transport
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009744 response to sucrose
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009072 aromatic amino acid family metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0098542 defense response to other organism
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0072330 monocarboxylic acid biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:1901362 organic cyclic compound biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0019438 aromatic compound biosynthetic process
biological_process GO:0046148 pigment biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006979 response to oxidative stress
biological_process GO:0042793 plastid transcription
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0006412 translation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006554 lysine catabolic process
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006574 valine catabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0009790 embryo development
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0042761 very long-chain fatty acid biosynthetic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016556 mRNA modification
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009902 chloroplast relocation
biological_process GO:0032502 developmental process
biological_process GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis
biological_process GO:0010048 vernalization response
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0016559 peroxisome fission
biological_process GO:0031347 regulation of defense response
biological_process GO:0044375 regulation of peroxisome size
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0044206 UMP salvage
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0006223 uracil salvage
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009657 plastid organization
biological_process GO:0000373 Group II intron splicing
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009295 nucleoid
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009536 plastid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009523 photosystem II
cellular_component GO:0010319 stromule
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0016020 membrane
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0005779 integral component of peroxisomal membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005777 peroxisome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0005634 nucleus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000311 plastid large ribosomal subunit
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005829 cytosol
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0043229 intracellular organelle
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005618 cell wall
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0052671 geranylgeraniol kinase activity
molecular_function GO:0052670 geraniol kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0052669 CTP:2-trans,-6-trans-farnesol kinase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0020037 heme binding
molecular_function GO:0016688 L-ascorbate peroxidase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0070191 methionine-R-sulfoxide reductase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity
molecular_function GO:0043754 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004845 uracil phosphoribosyltransferase activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0045703 ketoreductase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0051750 delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function GO:0004300 enoyl-CoA hydratase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0004392 heme oxygenase (decyclizing) activity
molecular_function GO:0018454 acetoacetyl-CoA reductase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0004462 lactoylglutathione lyase activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0004008 copper-exporting ATPase activity
molecular_function GO:0008693 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo260060.84Barchart | Table
Spo104930.83Barchart | Table
Spo233630.81Barchart | Table
Spo004050.80Barchart | Table
Spo174910.80Barchart | Table
Spo013050.80Barchart | Table
Spo192880.80Barchart | Table
Spo257830.79Barchart | Table
Spo073060.79Barchart | Table
Spo258170.79Barchart | Table
Spo237670.78Barchart | Table
Spo091490.77Barchart | Table
Spo233840.77Barchart | Table
Spo008720.77Barchart | Table
Spo232490.77Barchart | Table
Spo229990.76Barchart | Table
Spo218080.76Barchart | Table
Spo225300.76Barchart | Table
Spo123020.76Barchart | Table
Spo095360.75Barchart | Table
Spo131800.75Barchart | Table
Spo240810.75Barchart | Table
Spo088240.75Barchart | Table
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