Spo13565 (gene) | SpinachBase

Overview


Name	Spo13565
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cell division cycle
Location	SpoScf_01233 : 138902 .. 140556 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAATGGAATTATTTATAGAGTTTGCGAGTGTCTATAATGTTTTTCGTACGATGATCTGATTGAATTTCTGATCGATTTTAAGCTTGATAGAAGTAAATCAATTTAGCTACATTAAAATGTGTTGAAGTAAACGAAAATTGTGCAGAAGTAAACTTATTATCGCTAAAAGTAAACTGAACTAAATTTTTTTTCTGTATTATGCATTTTTGTGGGTGACTCAAATTGTTTAGCTTACTTTTAGAGTACGCAAGATTACCTGAATGTGGACATAGGATAATAGGATGGACAGCTGAATTATGCCAGAGTTTCACAGTTTGCAGGGTAGCATGTATATTTTCTTATATTCTCAAACATCCTGATGTGGTTGCGGTTATCGCTGTTGCTGCTGTTGCAATTGTTGTTGAAGCAGCAGCTTTTCCAGCATTAGCTTTTGGGATTTTGATTGAGCCTCTTCTCTTTCCTTAAGCAAGGTGTCTGTAGGACGATCAAAGCTCTACCAAACTAGAATGTCGTTGTTGTTTCATTTACTTTTAAATTAGTTCCATTTACTTTTTTTAATTATTTATCTACTTTTAAAAGTGTGATGCAACTTGAGATTTTGTTTATGTGAATTACTTTAAATCAGTTCCATTTACTTTCAAATTAGTTCCATTTACTTTCCTTAGTTCATTATCTACGTTTTTTGAATTGTGTTGATATAGGCTGCTACAAGTTGGGGATTGGTGTGGCTCGGATGAGCACCTACTTCTTTGTATAGATTAGTAGTACGTATGAACTGACGGAGGAGGACCCGACTACTAGATCACCTGCAAAGGAGGCCTACCAGAAGCAGCTGGGGGAGGTATTCAATATGAACAGGACAAGGATTCTTGCATTCAAGAACAAGCCACCTAATCCTGTTGAGTTCATGCCCCAGGAGTATACTTCTGTCCACCAACCTAAGTCCGTTAAGCCTCACAGACACATCCCTCAGGTAATTTTTATGCCTATTTGTATATAAAATCTACAAAATCGTTTATGTTTATTGTTGTTCGTTTAATTGGGTTGTTTGGTTAAAGTAGGATAAGAAACCCTAAGCAGGAATTGTTCTGTTCTTTGTATATTGAGTGTATAGTTGCAGACTTCAGAGCGTACATTGGATGCCCCCAATCTGTTAGACAACTACTACTTGAATTCGTTGGATTAGGATAGCAACAATGTTCTTGCAATAGCTCTTGGAACCGCAATGTACTTTTGGGATGCATCTACTGGATCTACTTCAGAATTGGTAGCCGTTGATGATGATAAAGGTCCTGTAACCACTGTAAACTGGGCTCCTGACGGTCGTCACGTTGGTGTTGACTTGAACGATTCTGAAGTTCAGCTCTGGGATTCAACATCCAACCGGCAGGTAACACTTAACATCTAACTCTACAACTTTCAATGACCAATTAGTCTATTGTTTANAACACTTAACATCTAACTCTACAACTTTCAATGACCAATTAGTCTATTGTTTATTGGTTCAATTATGACATTCATTGTTTTGTTGTACCTGTAGTTGAGGACTTTGAAAGGAGGCCACAGAGCTCGTGTTGGGTCACTGACATGGAACAACCACATCCTCACCACTGATCAATGGACAGAAAGATTGTTAACATTGATGTGA

mRNA sequence

ATGAGTGGAATGGAATTATTTATAGATACGTATGAACTGACGGAGGAGGACCCGACTACTAGATCACCTGCAAAGGAGGCCTACCAGAAGCAGCTGGGGGAGGTATTCAATATGAACAGGACAAGGATTCTTGCATTCAAGAACAAGCCACCTAATCCTGTTGAGTTCATGCCCCAGGAGTATACTTCTGTCCACCAACCTAAGTCCGTTAAGCCTCACAGACACATCCCTCAGGATAGCAACAATGTTCTTGCAATAGCTCTTGGAACCGCAATGTACTTTTGGGATGCATCTACTGGATCTACTTCAGAATTGGTAGCCGTTGATGATGATAAAGGTCCTGTAACCACTGTAAACTGGGCTCCTGACGGTCGTCACGTTGGTGTTGACTTGAACGATTCTGAAGTTCAGCTCTGGGATTCAACATCCAACCGGCAGTTGAGGACTTTGAAAGGAGGCCACAGAGCTCGTGTTGGGTCACTGACATGGAACAACCACATCCTCACCACTGATCAATGGACAGAAAGATTGTTAACATTGATGTGA

Coding sequence (CDS)

ATGAGTGGAATGGAATTATTTATAGATACGTATGAACTGACGGAGGAGGACCCGACTACTAGATCACCTGCAAAGGAGGCCTACCAGAAGCAGCTGGGGGAGGTATTCAATATGAACAGGACAAGGATTCTTGCATTCAAGAACAAGCCACCTAATCCTGTTGAGTTCATGCCCCAGGAGTATACTTCTGTCCACCAACCTAAGTCCGTTAAGCCTCACAGACACATCCCTCAGGATAGCAACAATGTTCTTGCAATAGCTCTTGGAACCGCAATGTACTTTTGGGATGCATCTACTGGATCTACTTCAGAATTGGTAGCCGTTGATGATGATAAAGGTCCTGTAACCACTGTAAACTGGGCTCCTGACGGTCGTCACGTTGGTGTTGACTTGAACGATTCTGAAGTTCAGCTCTGGGATTCAACATCCAACCGGCAGTTGAGGACTTTGAAAGGAGGCCACAGAGCTCGTGTTGGGTCACTGACATGGAACAACCACATCCTCACCACTGATCAATGGACAGAAAGATTGTTAACATTGATGTGA

Protein sequence

MSGMELFIDTYELTEEDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYTSVHQPKSVKPHRHIPQDSNNVLAIALGTAMYFWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTTDQWTERLLTLM

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13565.1	Spo13565.1	mRNA

Homology

[Close]

BLAST of Spo13565.1 vs. NCBI nr
Match: gi|410129740|dbj|BAM64819.1| (hypothetical protein [Beta vulgaris])

HSP 1 Score: 261.5 bits (667), Expect = 1.100e-66
Identity = 136/204 (66.67%), Postives = 148/204 (72.55%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     + LTE     E+P   SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEF
Sbjct: 199 SAMDFDYAHFMLTEGKKGKENPAMSSPSKEAYQKQLREVFNMNRTRILAFKNKPPAPVEF 258

Query: 62  MPQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYF 121
           MPQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y 
Sbjct: 259 MPQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYL 318

Query: 122 WDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGH 179
           WDASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDST+NRQLRTLKGGH
Sbjct: 319 WDASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSTANRQLRTLKGGH 378

[Close]

BLAST of Spo13565.1 vs. NCBI nr
Match: gi|731321084|ref|XP_010671158.1| (PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.5 bits (667), Expect = 1.100e-66
Identity = 136/204 (66.67%), Postives = 148/204 (72.55%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     + LTE     E+P   SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEF
Sbjct: 29  SAMDFDYAHFMLTEGKKGKENPAMSSPSKEAYQKQLREVFNMNRTRILAFKNKPPAPVEF 88

Query: 62  MPQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYF 121
           MPQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y 
Sbjct: 89  MPQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYL 148

Query: 122 WDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGH 179
           WDASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDST+NRQLRTLKGGH
Sbjct: 149 WDASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSTANRQLRTLKGGH 208

[Close]

BLAST of Spo13565.1 vs. NCBI nr
Match: gi|902239326|gb|KNA25556.1| (hypothetical protein SOVF_005510 [Spinacia oleracea])

HSP 1 Score: 260.4 bits (664), Expect = 2.400e-66
Identity = 135/195 (69.23%), Postives = 144/195 (73.85%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFM 61
           S M+     Y LTE    E+P + SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEFM
Sbjct: 29  SAMDFDYAHYMLTEKKGKENPASSSPSKEAYQKQLREVFNMNRTRILAFKNKPPTPVEFM 88

Query: 62  PQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYFW 121
           PQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y W
Sbjct: 89  PQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYLW 148

Query: 122 DASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHR 171
           DASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDS SN+QLRTLKG HR
Sbjct: 149 DASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSASNKQLRTLKGAHR 208

[Close]

BLAST of Spo13565.1 vs. NCBI nr
Match: gi|743888488|ref|XP_011038460.1| (PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Populus euphratica])

HSP 1 Score: 235.0 bits (598), Expect = 1.100e-58
Identity = 120/197 (60.91%), Postives = 141/197 (71.57%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M++    + LTE     E+PT  SP++EAY+KQL E  NMNRTRILAFKNKPP PVE 
Sbjct: 42  SAMDMDYAHFMLTEGRKWKENPTVNSPSREAYRKQLAESLNMNRTRILAFKNKPPAPVEL 101

Query: 62  MPQEYTSVH-QPKSVKPHRHIPQDS----------------------NNVLAIALGTAMY 121
           MPQ+++  H QPK+ KP RHIPQ S                      +NVLAIALG+ +Y
Sbjct: 102 MPQDHSHHHHQPKTAKPRRHIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVY 161

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS GSTSELV VDD+ GPVT+VNWAPDGRH+ + LN+S +QLWDS SNRQLRTLKGG
Sbjct: 162 LWDASDGSTSELVTVDDEDGPVTSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGG 221

[Close]

BLAST of Spo13565.1 vs. NCBI nr
Match: gi|224123602|ref|XP_002319120.1| (WD-40 repeat family protein [Populus trichocarpa])

HSP 1 Score: 234.6 bits (597), Expect = 1.400e-58
Identity = 119/197 (60.41%), Postives = 141/197 (71.57%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M++    + LTE     E+PT  SP++EAY+KQL E  NMNRTRILAFKNKPP PVE 
Sbjct: 42  SAMDMDYAHFMLTEGRKGKENPTVNSPSREAYRKQLAESLNMNRTRILAFKNKPPAPVEL 101

Query: 62  MPQEYTSVH-QPKSVKPHRHIPQDS----------------------NNVLAIALGTAMY 121
           MPQ+++  H QPK+ KP RHIPQ S                      +NVLAIALG+ +Y
Sbjct: 102 MPQDHSHHHHQPKTAKPRRHIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVY 161

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS GSTSELV VDD+ GP+T+VNWAPDGRH+ + LN+S +QLWDS SNRQLRTLKGG
Sbjct: 162 LWDASDGSTSELVTVDDEDGPITSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGG 221

[Close]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXQ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050110 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.400e-67
Identity = 136/204 (66.67%), Postives = 148/204 (72.55%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     + LTE     E+P   SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEF
Sbjct: 29  SAMDFDYAHFMLTEGKKGKENPAMSSPSKEAYQKQLREVFNMNRTRILAFKNKPPAPVEF 88

Query: 62  MPQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYF 121
           MPQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y 
Sbjct: 89  MPQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYL 148

Query: 122 WDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGH 179
           WDASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDST+NRQLRTLKGGH
Sbjct: 149 WDASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSTANRQLRTLKGGH 208

[Close]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Match: K4Q458_BETVU (Uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.400e-67
Identity = 136/204 (66.67%), Postives = 148/204 (72.55%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     + LTE     E+P   SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEF
Sbjct: 199 SAMDFDYAHFMLTEGKKGKENPAMSSPSKEAYQKQLREVFNMNRTRILAFKNKPPAPVEF 258

Query: 62  MPQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYF 121
           MPQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y 
Sbjct: 259 MPQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYL 318

Query: 122 WDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGH 179
           WDASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDST+NRQLRTLKGGH
Sbjct: 319 WDASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSTANRQLRTLKGGH 378

[Close]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1D1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_005510 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.600e-66
Identity = 135/195 (69.23%), Postives = 144/195 (73.85%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFM 61
           S M+     Y LTE    E+P + SP+KEAYQKQL EVFNMNRTRILAFKNKPP PVEFM
Sbjct: 29  SAMDFDYAHYMLTEKKGKENPASSSPSKEAYQKQLREVFNMNRTRILAFKNKPPTPVEFM 88

Query: 62  PQEYTSVHQPKSVKPHRHIPQDS----------------------NNVLAIALGTAMYFW 121
           PQEY SV Q K VKP RHIPQ S                      +NVLAIALGT +Y W
Sbjct: 89  PQEYASVQQSKPVKPRRHIPQTSERTLDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYLW 148

Query: 122 DASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHR 171
           DASTGSTSELV VDDDKGPVT+VNWAPDGRH+ V LNDSEVQLWDS SN+QLRTLKG HR
Sbjct: 149 DASTGSTSELVTVDDDKGPVTSVNWAPDGRHIAVGLNDSEVQLWDSASNKQLRTLKGAHR 208

[Close]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Match: B9I5Q9_POPTR (WD-40 repeat family protein OS=Populus trichocarpa GN=POPTR_0013s04640g PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.700e-59
Identity = 119/197 (60.41%), Postives = 141/197 (71.57%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M++    + LTE     E+PT  SP++EAY+KQL E  NMNRTRILAFKNKPP PVE 
Sbjct: 42  SAMDMDYAHFMLTEGRKGKENPTVNSPSREAYRKQLAESLNMNRTRILAFKNKPPAPVEL 101

Query: 62  MPQEYTSVH-QPKSVKPHRHIPQDS----------------------NNVLAIALGTAMY 121
           MPQ+++  H QPK+ KP RHIPQ S                      +NVLAIALG+ +Y
Sbjct: 102 MPQDHSHHHHQPKTAKPRRHIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVY 161

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS GSTSELV VDD+ GP+T+VNWAPDGRH+ + LN+S +QLWDS SNRQLRTLKGG
Sbjct: 162 LWDASDGSTSELVTVDDEDGPITSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGG 221

[Close]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Match: B9IPC6_POPTR (WD-40 repeat family protein OS=Populus trichocarpa GN=POPTR_0019s03850g PE=4 SV=2)

HSP 1 Score: 233.4 bits (594), Expect = 2.200e-58
Identity = 118/197 (59.90%), Postives = 141/197 (71.57%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTE-----EDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M++    + LTE     E+PT  SP++EAY+KQL +  NMNRTRILAFKNKPP PVE 
Sbjct: 37  SAMDMDYARFMLTEGRKGKENPTVNSPSREAYRKQLADSLNMNRTRILAFKNKPPAPVEL 96

Query: 62  MPQEYTSVH-QPKSVKPHRHIPQDS----------------------NNVLAIALGTAMY 121
           MPQ+++  H QPK+ KP RHIPQ S                      +NVLAIALG+ +Y
Sbjct: 97  MPQDHSHHHHQPKTAKPRRHIPQTSERTLDAPDLVDDFYLNLLDWGSSNVLAIALGSTVY 156

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS GSTSELV VDD+ GPVT+VNWAPDGRH+ + LN+S +QLWDS SNRQLRTLKGG
Sbjct: 157 LWDASDGSTSELVTVDDEDGPVTSVNWAPDGRHIAIGLNNSHIQLWDSASNRQLRTLKGG 216

[Close]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Match: CDC22_ARATH (Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-2 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.800e-56
Identity = 117/199 (58.79%), Postives = 136/199 (68.34%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTEE------DPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVE 61
           S M      + LTEE        T  SP+KEAY+KQL E  N+N TRILAF+NKP  PVE
Sbjct: 32  SAMNFDYAHFALTEERKGKDQSATVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVE 91

Query: 62  FMPQEYT-SVHQ-PKSVKPHRHIPQDSN----------------------NVLAIALGTA 121
            +P  ++ S+HQ PKSVKP R+IPQ S                       NVLAIAL   
Sbjct: 92  LLPSNHSASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHT 151

Query: 122 MYFWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLK 171
           +Y WDASTGSTSELV +D++KGPVT++NWAPDGRHV V LN+SEVQLWDS SNRQLRTLK
Sbjct: 152 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 211

[Close]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Match: CDC21_ARATH (Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-1 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.200e-55
Identity = 110/180 (61.11%), Postives = 130/180 (72.22%), Query Frame = 1


		  
Query: 15  EEDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYT-SVHQ-PKSVKP 74
           ++     SP+KEAY+KQL E  N+N TRILAF+NKP  PVE +P  ++ S+HQ PKSVKP
Sbjct: 61  DQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKP 120

Query: 75  HRHIPQDSN----------------------NVLAIALGTAMYFWDASTGSTSELVAVDD 134
            R+IPQ S                       NVLAIAL   +Y WDASTGSTSELV +D+
Sbjct: 121 RRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDE 180

Query: 135 DKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTT 171
           +KGPVT++NWAPDGRHV V LN+SEVQLWDS SNRQLRTLKGGH++RVGSL WNNHILTT
Sbjct: 181 EKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTT 240

[Close]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Match: CD203_ARATH (Cell division cycle 20.3, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-3 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.200e-43
Identity = 102/197 (51.78%), Postives = 121/197 (61.42%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTEE-----DPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     Y LT+      D  T S +++AY  QL  V N NRTRILAF+NKP      
Sbjct: 30  SAMDFDFANYALTQGRKRNVDEIT-SASRKAYMTQLAVVMNQNRTRILAFRNKP--KALL 89

Query: 62  MPQEYTSVHQ-PKSVKPHRHIPQDSN----------------------NVLAIALGTAMY 121
                 S HQ PKSVKP R+IPQ+S                       NVLAIALG  +Y
Sbjct: 90  SSNHSDSPHQNPKSVKPRRYIPQNSERVLDAPGLMDDFYLNLLDWGSANVLAIALGDTVY 149

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS+GSTSELV +D+DKGPVT++NW  DG  + V L++SEVQLWD  SNRQ+RTL GG
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGG 209

[Close]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Match: CDC24_ARATH (Cell division cycle 20.4, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-4 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.300e-43
Identity = 93/172 (54.07%), Postives = 115/172 (66.86%), Query Frame = 1


		  
Query: 22  SPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYTSVHQ-PKSVKPHRHIPQDS 81
           S +++AY  QL  V N NRTRILAF+NKP + +     +  S HQ PK VKP R+IPQ+S
Sbjct: 57  SASRKAYMTQLAVVMNQNRTRILAFRNKPKSLLSTNHSD--SPHQNPKPVKPRRYIPQNS 116

Query: 82  N----------------------NVLAIALGTAMYFWDASTGSTSELVAVDDDKGPVTTV 141
                                  NVLAIALG  +Y WDAS+GSTSELV +D+DKGPVT++
Sbjct: 117 ERVLDAPGLRDDFSLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSI 176

Query: 142 NWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTT 171
           NW  DG  + V L++SEVQLWD  SNRQ+RTL+GGH +RVGSL W+NHILTT
Sbjct: 177 NWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNHILTT 226

[Close]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Match: CD205_ARATH (Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-5 PE=1 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 2.600e-41
Identity = 94/196 (47.96%), Postives = 121/196 (61.73%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTEE-----DPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     Y LT+      D  T S +++AY  QL E  N NRTRILAF+NKP   +  
Sbjct: 37  SAMDFDFANYALTQGRKRNVDEVT-SASRKAYMTQLAEAMNQNRTRILAFRNKPKALLSS 96

Query: 62  MPQEYTSVHQPKSVKPHRHIPQD----------------------SNNVLAIALGTAMYF 121
              +     QP SVKP R+IPQ+                      S+NVLAIALG  +Y 
Sbjct: 97  NHSD-PPHQQPISVKPRRYIPQNSERVLDAPGIADDFYLNLLDWGSSNVLAIALGDTVYL 156

Query: 122 WDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGH 171
           WDAS+GST +LV +D+++GPVT++NW  DG  + + L++SEVQLWD  SNRQ+RTL+GGH
Sbjct: 157 WDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGH 216

[Close]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Match: AT4G33260.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.100e-57
Identity = 117/199 (58.79%), Postives = 136/199 (68.34%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTEE------DPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVE 61
           S M      + LTEE        T  SP+KEAY+KQL E  N+N TRILAF+NKP  PVE
Sbjct: 32  SAMNFDYAHFALTEERKGKDQSATVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVE 91

Query: 62  FMPQEYT-SVHQ-PKSVKPHRHIPQDSN----------------------NVLAIALGTA 121
            +P  ++ S+HQ PKSVKP R+IPQ S                       NVLAIAL   
Sbjct: 92  LLPSNHSASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHT 151

Query: 122 MYFWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLK 171
           +Y WDASTGSTSELV +D++KGPVT++NWAPDGRHV V LN+SEVQLWDS SNRQLRTLK
Sbjct: 152 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 211

[Close]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Match: AT4G33270.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 215.7 bits (548), Expect = 2.400e-56
Identity = 110/180 (61.11%), Postives = 130/180 (72.22%), Query Frame = 1


		  
Query: 15  EEDPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYT-SVHQ-PKSVKP 74
           ++     SP+KEAY+KQL E  N+N TRILAF+NKP  PVE +P  ++ S+HQ PKSVKP
Sbjct: 61  DQTAAVSSPSKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKP 120

Query: 75  HRHIPQDSN----------------------NVLAIALGTAMYFWDASTGSTSELVAVDD 134
            R+IPQ S                       NVLAIAL   +Y WDASTGSTSELV +D+
Sbjct: 121 RRYIPQTSERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDE 180

Query: 135 DKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTT 171
           +KGPVT++NWAPDGRHV V LN+SEVQLWDS SNRQLRTLKGGH++RVGSL WNNHILTT
Sbjct: 181 EKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHILTT 240

[Close]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Match: AT5G27080.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.200e-44
Identity = 102/197 (51.78%), Postives = 121/197 (61.42%), Query Frame = 1


		  
Query: 2   SGMELFIDTYELTEE-----DPTTRSPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEF 61
           S M+     Y LT+      D  T S +++AY  QL  V N NRTRILAF+NKP      
Sbjct: 30  SAMDFDFANYALTQGRKRNVDEIT-SASRKAYMTQLAVVMNQNRTRILAFRNKP--KALL 89

Query: 62  MPQEYTSVHQ-PKSVKPHRHIPQDSN----------------------NVLAIALGTAMY 121
                 S HQ PKSVKP R+IPQ+S                       NVLAIALG  +Y
Sbjct: 90  SSNHSDSPHQNPKSVKPRRYIPQNSERVLDAPGLMDDFYLNLLDWGSANVLAIALGDTVY 149

Query: 122 FWDASTGSTSELVAVDDDKGPVTTVNWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGG 171
            WDAS+GSTSELV +D+DKGPVT++NW  DG  + V L++SEVQLWD  SNRQ+RTL GG
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGG 209

[Close]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Match: AT5G26900.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 175.3 bits (443), Expect = 3.500e-44
Identity = 93/172 (54.07%), Postives = 115/172 (66.86%), Query Frame = 1


		  
Query: 22  SPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYTSVHQ-PKSVKPHRHIPQDS 81
           S +++AY  QL  V N NRTRILAF+NKP + +     +  S HQ PK VKP R+IPQ+S
Sbjct: 57  SASRKAYMTQLAVVMNQNRTRILAFRNKPKSLLSTNHSD--SPHQNPKPVKPRRYIPQNS 116

Query: 82  N----------------------NVLAIALGTAMYFWDASTGSTSELVAVDDDKGPVTTV 141
                                  NVLAIALG  +Y WDAS+GSTSELV +D+DKGPVT++
Sbjct: 117 ERVLDAPGLRDDFSLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSI 176

Query: 142 NWAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTT 171
           NW  DG  + V L++SEVQLWD  SNRQ+RTL+GGH +RVGSL W+NHILTT
Sbjct: 177 NWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNHILTT 226

[Close]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Match: AT5G27570.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 168.7 bits (426), Expect = 3.300e-42
Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 1


		  
Query: 22  SPAKEAYQKQLGEVFNMNRTRILAFKNKPPNPVEFMPQEYTSVHQPKSVKPHRHIPQDS- 81
           S +++AY  QL E  N NRTRILAF+NKP   +     +     QP SVKP R+IPQ+S 
Sbjct: 23  SASRKAYMTQLAEAMNQNRTRILAFRNKPKALLSSNHSDPPH-QQPISVKPRRYIPQNSE 82

Query: 82  ---------------------NNVLAIALGTAMYFWDASTGSTSELVAVDDDKGPVTTVN 141
                                +NVLAIALG  +Y WDAS+GST +LV +D+++GPVT++N
Sbjct: 83  RVLDAPGIADDFYLNLLDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSIN 142

Query: 142 WAPDGRHVGVDLNDSEVQLWDSTSNRQLRTLKGGHRARVGSLTWNNHILTT 171
           W  DG  + + L++SEVQLWD  SNRQ+RTL+GGH +RVGSL WNNHILTT
Sbjct: 143 WTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWNNHILTT 192

The following BLAST results are available for this feature:

BLAST of Spo13565.1 vs. NCBI nr
BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
BLAST of Spo13565.1 vs. TAIR (Arabidopsis)

BLAST of Spo13565.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|410129740\|dbj\|BAM64819.1\|	1.1e-66	66.6	hypothetical protein [Beta vul...	[more]
gi\|731321084\|ref\|XP_010671158.1\|	1.1e-66	66.6	PREDICTED: cell division cycle...	[more]
gi\|902239326\|gb\|KNA25556.1\|	2.4e-66	69.2	hypothetical protein SOVF_0055...	[more]
gi\|743888488\|ref\|XP_011038460.1\|	1.1e-58	60.9	PREDICTED: cell division cycle...	[more]
gi\|224123602\|ref\|XP_002319120.1\|	1.4e-58	60.4	WD-40 repeat family protein [P...	[more]

BLAST of Spo13565.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8CXQ6_BETVU	7.4e-67	66.6	Uncharacterized protein OS=Bet...	[more]
K4Q458_BETVU	7.4e-67	66.6	Uncharacterized protein OS=Bet...	[more]
A0A0K9S1D1_SPIOL	1.6e-66	69.2	Uncharacterized protein OS=Spi...	[more]
B9I5Q9_POPTR	9.7e-59	60.4	WD-40 repeat family protein OS...	[more]
B9IPC6_POPTR	2.2e-58	59.9	WD-40 repeat family protein OS...	[more]

BLAST of Spo13565.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CDC22_ARATH	3.8e-56	58.7	Cell division cycle 20.2, cofa...	[more]
CDC21_ARATH	4.2e-55	61.1	Cell division cycle 20.1, cofa...	[more]
CD203_ARATH	2.2e-43	51.7	Cell division cycle 20.3, cofa...	[more]
CDC24_ARATH	6.3e-43	54.0	Cell division cycle 20.4, cofa...	[more]
CD205_ARATH	2.6e-41	47.9	Cell division cycle 20.5, cofa...	[more]

BLAST of Spo13565.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G33260.1	2.1e-57	58.7	Transducin family protein / WD...	[more]
AT4G33270.1	2.4e-56	61.1	Transducin family protein / WD...	[more]
AT5G27080.1	1.2e-44	51.7	Transducin family protein / WD...	[more]
AT5G26900.1	3.5e-44	54.0	Transducin family protein / WD...	[more]
AT5G27570.1	3.3e-42	50.8	Transducin/WD40 repeat-like su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 108..149 score: 11
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 87..166 score: 7.9
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 92..149 score: 10
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 109..165 score: 9.
None	No IPR available	PANTHER	PTHR19918:SF8	FI02843P	coord: 2..170 score: 4.5
None	No IPR available	unknown	SSF117289	Nucleoporin domain	coord: 79..169 score: 2.41

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904668	positive regulation of ubiquitin protein ligase activity
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0005515	protein binding
molecular_function	GO:0010997	anaphase-promoting complex binding
molecular_function	GO:0097027	ubiquitin-protein transferase activator activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22882	0.73	Barchart \| Table
Spo21330	0.67	Barchart \| Table
Spo04648	0.66	Barchart \| Table
Spo08546	0.65	Barchart \| Table