Spo06054.1 (mRNA) | SpinachBase

Overview


Name	Spo06054.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	40S ribosomal protein S10-1
Location	SpoScf_00962 : 143656 .. 155345 (-)
Sequence length	3576

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGGTCAGTTGGCTAGGAAGCAAAAGGGCCTATAAGAGGATGAGGAGGGCGGTCTGATTTTATTTGATTTATTTTAGGAAGTTCCTAATGTAGACATGAAGACATGCATCTTTTGTTGCAAGTTTAATATAACCGGGTAAACAACTACATGTTAAAGGTTTAGGGTGAGTGCATTGATGATAAAGGTGTTACCTAGATTTCTAAAAGCTATTTTACATAGACATTCATGAAAGAGGTGTTGGAGGAGATCCTTTTACAACTAGGGTTTTGGAGAAGATCCTTTTACAACTTCTGGTAGCTGCTGTTTGAGTCTCTTCATGCCTCTGCAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGGTTCGTCTTCATCCTCTCCCTCCCTCCTCCCTTTCTCAACCTTCTGTCATTTCCATCGTGTAATTTTAATCATTTTCTTTCTCTTTTATTTTCTGTAGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGGTCTGTTGCTATCTCCTAATCTCAATATCAAATCTGGTCATCTGTGAATTTTAATATTTTCTGCTATGTTTTGCTGGTTTTCTGTATCATTGTATTAGGTTTTTATGAATTCATGATATACAATTATGCTATGAATTTTATTGCTTTTTTTTCCTGGGAAATATACTGTTAAGAGATTATTGTTTTTTCCGGGAAATATATTGGTGCGAGATTGCAATTTGAAGATACGCAACACGTGTGCATATGATTTGTTGATTGGATATAGTTTATGTGTCGTAGTTAGAAAGTAATACCCTTTTTGTTTGATTTGTATGGATTCAATTTTCTTAACTATTTGCAATTTTCAATTTAAGATTCTGTTCTTGTTGTCTAAAGTTTGTCCAAATTATTGACTTGGTGTTGTGCCTTTGAGAAACCTTTTGCTAATTTTGAACAACACAAATTGTTTTCTACCACCATGTGAGAGTATGCTATTATTGATGGATTCCATGAAGATTTGTTTGACAATCAAATGTTGGAGTTGCATATCATATATGTTCCAAAGTACTCGACCGGTCAGTAAATAAAGCTACGATGTTAAAACTTACAACTTGTCCATCTAAAGGAGTAATAATGATAATCTGATTCTTAAAAGTGACCTTTAGTAAAGGGTATTGCAGTAGATTCCGTAGTATTCAGGAACGGGGGAGTAAGTGTGTTTATGTGTTCTGTTTGATTCTGAATGAGTGCAACTGAGACGTGGTGTGGTACTCTGGTGCGTGTCTTAATTGAACAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTGTAAGTGATTAAGCTCATGCAGATCTTTAAGTCGAAGGAGTATGTCCGTGAGAGCTTTGCCTGGATGCACTACTGCTGGTACTTGACAAACGATGGTATTGAATTCTTGAGGACTTACCTCAACCTCCCTTCGGAAATTGTTCCTGCTACCCTTAAGAAGCAGATGAATTAAGGTTGTTGTTCGTCCCATGGGTCCCGGTGGTAATCGCCCACGGTATATTTTTGCTTGTTACTTGTGTGTGTTGTGTCTTCTCAGCTAACTGATCTTTTTTTCTGTGATTATTTGCTTGTTAAATGGTTTGTCTTGTCTATTTACAGTATCCCACCTAGGTTTGGGGGTAAGCGACCAAGGTCGGTGACCGTGAGGGTTACCGCTCAGGACCTCGTGGACCACCTGGTGAATTCAGTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGTAAGTAATTCGATACAAATGGTTTTATAGTACTTGCAAAGTCCTAGGTGTTTGAGATGGCTATTTAAAACCTTTAGTTTCCTTCTGTGTTTTGTGTGAACAAAATCCCCCCCTTGCCCCCAAGTTGGGATTACTGAAAAGTGTTGTGGTTTATTGTGCTCCAAGTTGAAGTAAATATTGTACAAGTTTGTAATTACGTTTGAAGTAAATAATGTACAAGTTTGTAATTACGAAGTAGGTATTATTCTTGCTGAATTGCATGAGATATTTATATCTTCCCAGGATCTGTCTTTCTTATATCTCTCTAGGATCTATCTTTCTTTCTCACTCTTATTTTTAATAAATAAATCATGATTTTACTTGCAACGTGATAAAAGTTTCTCAAATTATATATTTATGTATGATTTCACGACCTTCGTCGTATACTGATCTAAGTTATGGGCTCGGGTCATCAACGACCGTGTTCTCACTAGAAAGTAAGAATCTGAGAGGGGGGGGGNGGGGGGGGGGGGGGGGGGTTGTGTAGTTTGTTTTATAAGCTATGGGTTGTCAACGAATGGGTTCTCATAGAAAGTACTTCGTAAGAATTTGAGGTTTTTCTTTCATTATAAATATAGTTTGTTTGAAAGTTATAAGAGTTTGAATAACTTTGAATTGCGGTATCCAGATACCTGATTGTTCTTCAATTACTGTTCTGAAGTCCGGGTGTATGTTATTGTTGTATGTTTATCTCTTGTAAAAGATACTTAACTGGATGAATGGTCTGTTTTTTGACAGGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGGTCATGCTCATTGATGGATTATGTTCCTTGAAGTTGCTTTGATTTCAATGTTGAATAGTTTAACTTACCGTGTGTACCTTCTTCTTGTCTGTAGTGAGGACAATTAAGTCTGTAGTGAGGACAATTAAGAACACAGAGGTGGCTTTTGCATCGATTTCCTCGGTTTCTTTATAAAGGATGGGTCTGATAATACTTCTTGAAAGGACTCCTCAGGTTCTAAGCAGACTACTTTCATGAAACAATGTAATAACTCCCAATTCCCTTAAAGTTGAAGTTTTTTTCTATATTATACTCCAGGCTCCCTAATTACGAGTTTGCTCGTTGACGATAGCAGGGCCTAAGTGTTATTTAATTGTATGCGTATCTATCCCAAGTTCAAGTTTGATCATTAATAATAATTTTGCATTTGCTATTAAGTGTTTTGCGCCGATCTTTTCCGTAATCCTATTTAACATAACAATTTTTTATACCTTGGGGGACCGTGCGCGCTAGCGCACGGGCCAACAACTAGTTTTCACAAGTTTGAGAAGTCTTGAATGAGTATGACGGGTGAAGTGAAGAAATTAAGTAAGTCTGAAAAGATCTCAACAAGAATTTGAGAAATTGAAAATAAATAAAAAGCTGATGTGGAAGTCTGAGCTCATACTAGCGCTAATCTTACTCTAAGGGGAAAATGGAAATTTAATCACAACGTTGACACTTTTTTTTTAATTATTATTTTGAAGGAAGTTCATTATGTTTATTTCTATTTTTTTTATAGAAAAGTTCACATGAAACTTGGATCAAAAACTCATAAATAAAACGGACGTACTTTACCTTAAACTAATCAAAGTTACCGATGTTCAAAAAATTATCTTTTTAATTGGTAAATTTTCCTCTTTACAAAAAAAAAAACCCCGGAAAAATCACTCAATAACCTACCTTTTTTAAGTGGAACTCGTAATGTATAAAATTATTGAATCCTTTAATGAAAATTATCCATGAAAAATCACTAATTGTTTAAAAATTATCCCAATATATTATACACACGAGACAATGACACATACTAAGCTTTTACTTCAATACGACTAGAAAGTAGCAAATGAAAATCATGTACGTTTTCATTTCCTTTTTCTTTGTCCCAAAACTAACACGTACTCGAGTTTCTAAACACAAAGTATAACCTCATATTATTTAAGTAATTTTAACATGTTAGATATAATACGCCGAGTTGTCTGATATATGCGAGGTGTCGATATAGTAGCATCATTCTCCTTACCAATTGGAGTAAAATGAAGGTACTTCGTATATGACTTCATCTTAAAATCGCGATACTACCCCGTAATTAACTAATTAGTAAATGCTTGTTTGGTTTCTTTTTTGAAATGATGAGTTGAAAAACGGAAATTTCCAAATAAGTTAGTTATTTGGTTGACAACAAATTAAAGAATTTCAACTTGTGGAATTTCCAAACTCCCGCGGAACCAAGGAAATTATTAACCTGGCTTCTCCTATGTCACCCAAATTTTTAATGTACTCCCTCCGTTCCATATTAGTTGTTACACTTTCTTTTTTCGTCCGTCCCAGATTAGTTGTTCACTTCTAAATTAGGAATGACCCCATAATTATTATATTGTCTCTCTCCTCCCACTAATTTTTTTTTGTCCCCACACCTTATCTCATTCAATCAAAAAAATACCTTACTAACTTCTATAGTGTAACGACTATTTTGGAAGGGAGGGAGTATTAAAATTTTGTTAATTTCAACCAAACAAGTTAAATACACATTTTAAAATTTTGACGTGAAAGTAATTTCGCACGAAATAAAAATCCCTATCAAATTACATTCCCATTTTAACTAAACAAACAATGAATAAACTAAACACAGAGTAAAAAGAATATTAACACCAAAATAGTACGGAGTAGATTTTAAATCCGGATAGATAGATAAGTAAAGTCGAGACGGCGAGACTCGAGTCTCTAAAACAAAGTCATTGATATGCTTTGGTGCCATTCGTGGTTATTTTCTACACAACGTTTCCGAAAATACCCCTAATATTTATTTCTGCTTTTTAGGCCGGCAATTTCAGTTAAATTAGCAAATTTCGTGTTTTTGGATTTTCAAACTGAAGTGTGAAAGAGAGAGAAGGAGAGAGAGAAGGTGAGGAGAGAGAAGGATTTGCGGTGACAAAAATATTATCCAAAATTGTTAAAAACAAATCAGTTTTTTCGGAGGATCTGATACTATTTGTTGGGGATTTTTCGGAGTTTTTCAAGAGGTACACTATCTTAAATTCTTAAACTTTACTTATATTTTACGAAATATCTTCAACTGTCAAATATTTAAACGGCATTGTTGTTTTAATTTTGAAACTAATTACTGTTTAATTTGCTCATTAATGCAAAAAGTTTCGATCTTGATTACAATTTCAGGGTAATCTTAAACTCATAACCTTAAATTTTCGATAATTTTAAGAGTTTTGGGTGCTGTTTCATTGACTTTTCCTATTTTTTTTAACGTTAGAAAAAATCTTAGAAATTTATTAAGGTTGTTGAATGTGGAAGACGTTTAAGGAAGAAAAAAAATCAGTGATTTCTAGAGAGAGAGCTTCTGAAGGTTGCTTTAGAGTAAAGGGAGAAGCTTTACTATTAAGATTGCTAGATTTCTTTCTTTTTATGGAAGCTTAAGAGGAAAGATCAAGCAAACTTTTTTTTGTTTTTGTTTTTGATTTATGATTAACAACCTAATCCCATGATTGTAACTTGTAAACCCCCATGTTTTCTTCTCTCTTAATTGTTTAATTTTGTTGTTTAGTCCAGTTAATTAAATTAATCCCAGTTAAGAAAAGTGTGGAAAAATGCTATAATTAGCTTTTAAAAAAAAATATATGTTAATTTTATTTGCTTGGGGTGTTATTTTTACAGGGAATAAGGTAGAAAGGTAGTACATTTGCTTTTGTGAGCTGTTGAGACATCCAATTTTCATGATGACAATGCTTTTGCTGGTGTGACTAAAATTAACTGACTTCGTTGATTTTGTGGGAATCACAGGAAACTGCAGTGAGTTGTTAAAGTTTATTATGGTTCTTTCCTAATTTTAGGGTGTTTTTGTGTACAATGAATGTTGTTGATTGTGGTAAGGACACGTTTTTCAGGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAAGTCTGATAAGATAACGGGAGCTATGGCGGAGCGAGAGGAGAAGATCTTGGTGTTGGTTAGATTAAGGCCCTTGAATGACAAGGAGATTTCCAAGAATGAGGTAGCTGATTGGGAATGTATCAATGAAAGCTCCATTTTGTATAGAAATAGTCTTCAGGAACGATCTGGACTTCCCACGGCCTATTCATTTGGTAAGCCTATATTTTAGCTATAAGATCATTTTTAAACTCCATGATTTATTATTGTTATTACCGATACTTTGTTTTTTTAGAGGATTGTAAGGATATTGTGATTGATGGAATATGTAGATAAGTAAATATTGTAACATGTCAAGGTCTTTGTGTTTTCCCCCAAACTTATTGCTCATGCAAATAACGATGTATTTCTCGAGTATTAGACCATTATGAGATGCCATGTTAAATATATGAAATTGCACAAGAGAAGTGAAGAACCTTTGATTTAGGTAACTTTTTGACAATGCTATGTTGGTTCTGAAGGGGAGCATTGATTCTTGATTATGTATTTATGTTCCAACGAAATGCAAAATCTTGTTTTTACTTTATCTTTGTACTGGTTGGTAGACAGGGTATATTCAGGCGATTGCTCCTCCAAGCAGGTCTATGAGGAGGGAACTAAGGAAATTGCTCTTTCTGTTGTTAGTGGGATTAATTGTAAGTACAATATCAGTATTTTTATTTCTAATCATTACAATTTACAGGGTATTTTTTTTTTACAAAGATACAGCGTATGAAGTGTATTCATCGAAACTATTTTTTTCTCCTTAGCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAATGCAATAACTGAGTATACGGTTGCAGATATATATGACTATGTACAAAGGGTAATAAAAAAATTGGAGTTCTTTCTATCTAGTTTGGTTTCTAACTCAAACATAATGTTACTAAAATAAGCTCATGTGGCCCTTCAGCATGAGGAACGAGCGTTTGCTCTCAAGTTCTCTGCCATGGAGATCTACAATGAAAATGTTAGGGATCTTCTTAGCACGGACAATACTCCTCTGCGGCTTATGGATGACCCTGAGGTACATTTAATTCCCCTGAACTAGAATATTGTGGGATTGCACATTTACTGACGTGACTGTATTTCACCAGAAAGGAACTATTGTGGAAAAGCTGACAGAGGAAAAGATAAATGATTGGAACCATTTAAGAAAGCTGCTATCAATTTGTGAAGGTAAAAATTAGAGAGTATTGGTTTGGATATAAACTTCTCATTCATTATGTTCTTGTTTATTCACTTTAATCATGACATTGCAGCTCAAAGGAAAGTAGGAGAGACCTCCTTGAATGAACAAAGCTCAAGGTCACATCAAATTCTTAAGCTGGTAAAATTCTTCCTTCAATTTTCGTTCAACCCCTTATTCCATCATTTGTGTATTCATCTCCTTATGCTTTTCTTGATATTTGCAGACAATCGAGAGTTCTGCGCGTGAGTTCATAGGCAAGGGAAACTCAAGTACCCTTTCAGCTAGTGTGGTAAGCAACCTAGAACTTAAGTACCTCTTGCTCCATTTTGTTTAATACAACATTTTACTTGCTGATACAGTGTGCACACGATACAATTGCTGACAAGTTGATGTGTATCAATTGCTCAGTTCTATTCTATTTGTTTACATATTCTCCTTCAGGTTGTCAAACCAACATGACTTCATTGATGTTCTTCTACAGTTTTTTATTGATCTGGCTGGAAGTGAGCGTGCATCTCAGGCAATGTCAGCTGGAACACGGCTAAAGGAAGGCTGCCACATAAACCGGAGTCTGCTGACACTAGGGAATGTTATCCGCAAGCTAAGGTTTCTTCTTGAATTCCAGTTCTATATCTTCTTTTTCTTGGAATACTTCTGACATATTGCTACCGTTATATATTATGTTTCAAAAAAATCACGACTTTTAGTGTATTCCATGGTAGTCTGGTCTTCTGCTTGTCACAATAAAGAAAAAAAGTGTAACATTAGGCATTCTCTATTTTCTGCATAACTTGTAATGATCATATGCTGAAACACTAGTGATCTTTGACAGCTCACCAATCTTACTCTGTCTTGCTGCAGCAAGGGTAGACAAGGACACATCAATTATAGGGACTCTAAACTGACCCGTATCCTGCAACCCTGCTTGGGAGGCAATGCTAGGACCACCATCATTTGCACTCTGAGCCCTGCACGTAGTCATGTGGAGCAGTCAAGGAACACTTTGTTGTTTGCTAGTTGTGCTAAACAGGTGACAACAAATGCACAGGTGAATGTTGTCATGTCAGACAAAGCCTTGGTCAAACACTTGCAGAAAGAATTGGCCAGACTGGAAAACGAGCTAAAAAGTCCAGCCCCTACATCATCGTCTTGCAATTGTTCAGTGACCATAAGAAAGAAAGATATTCAACTGGAAAAGGTACTGTTTTTCTTTCTGAGCTGTTCTAAGAAAGTGGCTGAGGTGCTATCTGCATTTAGTATACTTTAACATACAAGACTCTGACTCAGTTGATTGGCTGGCTTCTGGGATATCTGTACGGTCAGTTTCCAGGGGTAGTCACCTAGCTGTTTTGTTCAGTTTGCGACTTCTAGGGAGACTATGTAATCATCACCCGAAATACTGAGTCTTTACGTAGTCCTGCTAAATATTTGGTCCATTTGTCCTACATAATAGCTACAGATACTATTTTGGGTAATATGGATAAAGCCGTCACCTTTACTTCGACTTTGTGATTGGATTTCTAAGGGACTACCTACTTAGATTGAGAAATAGAGAGTTTGTGGGGGGTAGTCCAAATACTTAACGGGTCTTTGAATAAGATTATGTCATATGCTTATTGATAAATGTCCTTCGAAAGTTTCCTATTTTGATCCTGCTATCTGGACCATATTAGCTAAATTATCTTTATTCTTAATTAGTGTTCTGCTGCATGTGAGATTTTTGGAGGTGATGAAGGCTGAAATTTATTTTGTCTTGTCTGGAAGGAATACATATGTGTCTCAGAAATAGCTATAGCTCAGGGTTAGAAAACATTTACCACGATGCACATGCTTATACAGTGCTAAACATTATATTCGGTTCGGTTCATCACCCATAGCTGCTTATACAACTACCTCACTAGTGGGAGGGAAGAGTCGGATGCACTGAATGCCTACAATGTCTTTATTTTTATGTACAGATGGATAAGCAGATAAGGGAACTGACTAAGCAACGAGATCTTGCTCAATCTAGGGTTGAGGATTTATTGCAAATTATTGGAAATGATCAATCATCTAATAAACAGGTATTTAGAATGTAACATATTAATTTCTCCTTTCATTTTTTTTTTCAACACCTGTTGCAAGGTGAGAATGCTTTAATTTCTGTGGGTTAGTAACAAATCTCCAGAACAAATAGTAAACAAAATGCACCTTGAAAATTGCTTCTTCGGTTACTGATTTGTTTATTTTTTCTCCCATCAGCAACGGCAAAAACCCCATGCAAAGTGGAAAGTACAGAACAAATGGGAAGATGAAGGTTCTATTTCAGACTCTAGTGTGAATGGTCATCATCGCCTGGATGGTGTCCTAGCTGAAGATGGAGAAAGTTATATTGAGGATCCATCTTCAAGGGGAGTTTCTGATGACCAGTGTAAAGAAGTTCGATGCATTGAGATGGAAGGATCTGAAGCTTCTATTGGGTTTGGAAACGGGCATGCTGCTAATCATGGTAGCATAGGTAGGAGCTCCCATCAAAATGGTTTCTTCTATGGTTCATTGGAACAAAGGATCCAGGAAGTGCAAAGGTCAATCGATTCCCTTACTAGTCCTCAACCCGAAAATCCATCCGTATGGGATGATGCTGCGGATGCATCAAGTTCCAGGAGCCTGAATTTCAGCAAGACTCGGGTTTCAAAGGAAAATTATACAAATAAGGAAGAACATTCAGAAACAACCCCTCCTTGTGAAGTGGAGACGGACTTCAACGGCAGACCAGGAGGATTTAGAAAGTTTGCTGTACTAGATTATGGTGCGGACTCTGGAAAATTGTCACGCAACGGCTCTCAGTCATCTGTTGGGACAGAAGTTGTTGATGATGTAAGATCAGAGGGTGGGAGGAATATCACAGATGCGGAGATTACTAGCGTACAGACTTTTGTAGCTGGTCTCAAGGATGCTAAGCTTCAATATGAGAAACAACTTGGGGACGGCCAGGTTAGCATACTGTTATTCTTAGTTGTTGCATACTAACAATTGTGAAAAAGATATCAGCATTTACTTTGCAGTACTTTCTGGTATTTTATAATCCCCTGTCATTAATTTTTCTTAGAATGTTATCTTCGAATATTACTGTGCCATATTTGCTAATTTTGATATCTTACCTATGTGATTGTCCTGGCTAATTTTGGTGCAACTTTTAATTTTGTATTTTTTTTGTTGATATGATTAGGTACGTCCCGAGTTGAGAAAGACCTTGAGAGATGTGGGATTGGATCCTATGCTTGATGGAGAAGACAGTACATTGGATTGGAGTTTGCAATTTGAAAGGCTTCAGAAAGCTATAGTTGAGTTGTGGCAAATTTGCAATGTTTCATTGGTTCACAGGACCTACTTCTTCCTTCTCTTTAATGGCGAGCCTACAGATTCCATTTACCTGGAGGTAGAGTTAAGGAGGCTCACTTTCCTCAAGGATACATTACCCCATGGTAATCGTTCGGTAGATAGTGGACGTGCTCGGAAATTGGTTTCAAGGTTCGCTCTTTTCTCCCCATTTTTTTGTAATCAAATCTCATTTTAAGATATTTGGACACATGGCCAATGCAAGTATATTACAGAGCAGTCATGATTTTCTCAATTATGTTATGTTGAAATTTGACACAAACTGTAATAGACCAATTTAAGGTGGGCCAACTAAGTAAATTGTGTTTGGTGGTGAAACAGCGAGAAGGCACTTAGAAAAGAGAGGGAGACGTTGAGCAAGCTGATCAACAGAAGGTTCTCAAATGAGGAAAGGAAGAAACTATACACGAAGTGGGGTATCAGGCAGGATTCAAAGCGCAGACGTTTACAGCTTGTATCTCAGTTATGGACAGAGACAGGAGACATGGATCATATTGTGGAGAGTGCAACCATCATAGGAAAACTAGTAAAGTTCTCAGAGCAAGGACGAGCTCTGAAAGGGATGTTTGGGGTTAGCTTCTCACCTCCAAGCTTGAAGAGGAGTTCATATGGCTGGATGAACGGCATGTCATCCCTTGTATGAGAGATTAGTGTTTGACTTGTGTTAGTCTGTTAGCCTGTAGGTATCTATCTATATATTAATATAGTTGAAGTTAGCCACACATACAGACAGTTCAGTTTAACTAAAGTATCACCCATTCTTTCCATATTTGTAGGTGAATCATAAAATTGTGTCTGATTCACGTAAACACAGATTAGGAAAGTTGTATGTTGGTGTCTGGTTTTGTGCTGCTGGTGATTGTATTTAACTGTGAGTTTAGGAATGGGTACTTTTTACCAGGTATTTTAGTACTGTAGCTAATTGTGAGTTGATGAGCTCTTCTAGAGTTCTAGCTGCTTGGCGCGATTATCAAGTTTTATTCAAGTCTATACTGTATGTATACTTCATCTGCAATTTTTATTATGCAGTATTCCGAGCTTTATGTATTGCTCCAGTTGTTCATATATTTAGATTTACCAACTCTACATTTGTAAATCACATGATATTTATGTGGGTCTCGTGGATTTCGAGGGCCT

mRNA sequence

ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGTGAGGACAATTAATTTTTCAAGAGGGAATAAGGAAACTGCAGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAAGTCTGATAAGATAACGGGAGCTATGGCGGAGCGAGAGGAGAAGATCTTGGTGTTGGTTAGATTAAGGCCCTTGAATGACAAGGAGATTTCCAAGAATGAGGTAGCTGATTGGGAATGTATCAATGAAAGCTCCATTTTGTATAGAAATAGTCTTCAGGAACGATCTGGACTTCCCACGGCCTATTCATTTGACAGGGTATATTCAGGCGATTGCTCCTCCAAGCAGGTCTATGAGGAGGGAACTAAGGAAATTGCTCTTTCTGTTGTTAGTGGGATTAATTCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAATGCAATAACTGAGTATACGGTTGCAGATATATATGACTATGTACAAAGGCATGAGGAACGAGCGTTTGCTCTCAAGTTCTCTGCCATGGAGATCTACAATGAAAATGTTAGGGATCTTCTTAGCACGGACAATACTCCTCTGCGGCTTATGGATGACCCTGAGAAAGGAACTATTGTGGAAAAGCTGACAGAGGAAAAGATAAATGATTGGAACCATTTAAGAAAGCTGCTATCAATTTGTGAAGCTCAAAGGAAAGTAGGAGAGACCTCCTTGAATGAACAAAGCTCAAGGTCACATCAAATTCTTAAGCTGACAATCGAGAGTTCTGCGCGTGAGTTCATAGGCAAGGGAAACTCAAGTACCCTTTCAGCTAGTGTGTTTTTTATTGATCTGGCTGGAAGTGAGCGTGCATCTCAGGCAATGTCAGCTGGAACACGGCTAAAGGAAGGCTGCCACATAAACCGGAGTCTGCTGACACTAGGGAATGTTATCCGCAAGCTAAGCAAGGGTAGACAAGGACACATCAATTATAGGGACTCTAAACTGACCCGTATCCTGCAACCCTGCTTGGGAGGCAATGCTAGGACCACCATCATTTGCACTCTGAGCCCTGCACGTAGTCATGTGGAGCAGTCAAGGAACACTTTGTTGTTTGCTAGTTGTGCTAAACAGGTGACAACAAATGCACAGGTGAATGTTGTCATGTCAGACAAAGCCTTGGTCAAACACTTGCAGAAAGAATTGGCCAGACTGGAAAACGAGCTAAAAAGTCCAGCCCCTACATCATCGTCTTGCAATTGTTCAGTGACCATAAGAAAGAAAGATATTCAACTGGAAAAGATGGATAAGCAGATAAGGGAACTGACTAAGCAACGAGATCTTGCTCAATCTAGGGTTGAGGATTTATTGCAAATTATTGGAAATGATCAATCATCTAATAAACAGCAACGGCAAAAACCCCATGCAAAGTGGAAAGTACAGAACAAATGGGAAGATGAAGGTTCTATTTCAGACTCTAGTGTGAATGGTCATCATCGCCTGGATGGTGTCCTAGCTGAAGATGGAGAAAGTTATATTGAGGATCCATCTTCAAGGGGAGTTTCTGATGACCAGTGTAAAGAAGTTCGATGCATTGAGATGGAAGGATCTGAAGCTTCTATTGGGTTTGGAAACGGGCATGCTGCTAATCATGGTAGCATAGGTAGGAGCTCCCATCAAAATGGTTTCTTCTATGGTTCATTGGAACAAAGGATCCAGGAAGTGCAAAGGTCAATCGATTCCCTTACTAGTCCTCAACCCGAAAATCCATCCGTATGGGATGATGCTGCGGATGCATCAAGTTCCAGGAGCCTGAATTTCAGCAAGACTCGGGTTTCAAAGGAAAATTATACAAATAAGGAAGAACATTCAGAAACAACCCCTCCTTGTGAAGTGGAGACGGACTTCAACGGCAGACCAGGAGGATTTAGAAAGTTTGCTGTACTAGATTATGGTGCGGACTCTGGAAAATTGTCACGCAACGGCTCTCAGTCATCTGTTGGGACAGAAGTTGTTGATGATGTAAGATCAGAGGGTGGGAGGAATATCACAGATGCGGAGATTACTAGCGTACAGACTTTTGTAGCTGGTCTCAAGGATGCTAAGCTTCAATATGAGAAACAACTTGGGGACGGCCAGGTACGTCCCGAGTTGAGAAAGACCTTGAGAGATGTGGGATTGGATCCTATGCTTGATGGAGAAGACAGTACATTGGATTGGAGTTTGCAATTTGAAAGGCTTCAGAAAGCTATAGTTGAGTTGTGGCAAATTTGCAATGTTTCATTGGTTCACAGGACCTACTTCTTCCTTCTCTTTAATGGCGAGCCTACAGATTCCATTTACCTGGAGGTAGAGTTAAGGAGGCTCACTTTCCTCAAGGATACATTACCCCATGGTAATCGTTCGGTAGATAGTGGACGTGCTCGGAAATTGGTTTCAAGCGAGAAGGCACTTAGAAAAGAGAGGGAGACGTTGAGCAAGCTGATCAACAGAAGGTTCTCAAATGAGGAAAGGAAGAAACTATACACGAAGTGGGGTATCAGGCAGGATTCAAAGCGCAGACGTTTACAGCTTGTATCTCAGTTATGGACAGAGACAGGAGACATGGATCATATTGTGGAGAGTGCAACCATCATAGGAAAACTAGTAAAGTTCTCAGAGCAAGGACGAGCTCTGAAAGGGATGTTTGGGGTTAGCTTCTCACCTCCAAGCTTGAAGAGGAGTTCATATGGCTGGATGAACGGCATGTCATCCCTTGTATGAGAGATTAGTGTTTGACTTGTGTTAGTCTGTTAGCCTGTAGGTATCTATCTATATATTAATATAGTTGAAGTTAGCCACACATACAGACAGTTCAGTTTAACTAAAGTATCACCCATTCTTTCCATATTTGTAGGTGAATCATAAAATTGTGTCTGATTCACGTAAACACAGATTAGGAAAGTTGTATGTTGGTGTCTGGTTTTGTGCTGCTGGTGATTGTATTTAACTGTGAGTTTAGGAATGGGTACTTTTTACCAGGTATTTTAGTACTGTAGCTAATTGTGAGTTGATGAGCTCTTCTAGAGTTCTAGCTGCTTGGCGCGATTATCAAGTTTTATTCAAGTCTATACTGTATGTATACTTCATCTGCAATTTTTATTATGCAGTATTCCGAGCTTTATGTATTGCTCCAGTTGTTCATATATTTAGATTTACCAACTCTACATTTGTAAATCACATGATATTTATGTGGGTCTCGTGGATTTCGAGGGCCT

Coding sequence (CDS)

ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGTGAGGACAATTAATTTTTCAAGAGGGAATAAGGAAACTGCAGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAA

Protein sequence

MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTLGEKGGAPTYYQPSFGGRSLISVYDSPKVLAVYINLKVRTINFSRGNKETAVWVLNGGDCHRGVE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06054	Spo06054	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06054.1	Spo06054.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06054.1.CDS.11	Spo06054.1.CDS.11	CDS
Spo06054.1.CDS.10	Spo06054.1.CDS.10	CDS
Spo06054.1.CDS.9	Spo06054.1.CDS.9	CDS
Spo06054.1.CDS.8	Spo06054.1.CDS.8	CDS
Spo06054.1.CDS.7	Spo06054.1.CDS.7	CDS
Spo06054.1.CDS.6	Spo06054.1.CDS.6	CDS
Spo06054.1.CDS.5	Spo06054.1.CDS.5	CDS
Spo06054.1.CDS.4	Spo06054.1.CDS.4	CDS
Spo06054.1.CDS.3	Spo06054.1.CDS.3	CDS
Spo06054.1.CDS.2	Spo06054.1.CDS.2	CDS
Spo06054.1.CDS.1	Spo06054.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06054.1.utr3p.13	Spo06054.1.utr3p.13	three_prime_UTR
Spo06054.1.utr3p.12	Spo06054.1.utr3p.12	three_prime_UTR
Spo06054.1.utr3p.11	Spo06054.1.utr3p.11	three_prime_UTR
Spo06054.1.utr3p.10	Spo06054.1.utr3p.10	three_prime_UTR
Spo06054.1.utr3p.9	Spo06054.1.utr3p.9	three_prime_UTR
Spo06054.1.utr3p.8	Spo06054.1.utr3p.8	three_prime_UTR
Spo06054.1.utr3p.7	Spo06054.1.utr3p.7	three_prime_UTR
Spo06054.1.utr3p.6	Spo06054.1.utr3p.6	three_prime_UTR
Spo06054.1.utr3p.5	Spo06054.1.utr3p.5	three_prime_UTR
Spo06054.1.utr3p.4	Spo06054.1.utr3p.4	three_prime_UTR
Spo06054.1.utr3p.3	Spo06054.1.utr3p.3	three_prime_UTR
Spo06054.1.utr3p.2	Spo06054.1.utr3p.2	three_prime_UTR
Spo06054.1.utr3p.1	Spo06054.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06054.1.exon.23	Spo06054.1.exon.23	exon
Spo06054.1.exon.22	Spo06054.1.exon.22	exon
Spo06054.1.exon.21	Spo06054.1.exon.21	exon
Spo06054.1.exon.20	Spo06054.1.exon.20	exon
Spo06054.1.exon.19	Spo06054.1.exon.19	exon
Spo06054.1.exon.18	Spo06054.1.exon.18	exon
Spo06054.1.exon.17	Spo06054.1.exon.17	exon
Spo06054.1.exon.16	Spo06054.1.exon.16	exon
Spo06054.1.exon.15	Spo06054.1.exon.15	exon
Spo06054.1.exon.14	Spo06054.1.exon.14	exon
Spo06054.1.exon.13	Spo06054.1.exon.13	exon
Spo06054.1.exon.12	Spo06054.1.exon.12	exon
Spo06054.1.exon.11	Spo06054.1.exon.11	exon
Spo06054.1.exon.10	Spo06054.1.exon.10	exon
Spo06054.1.exon.9	Spo06054.1.exon.9	exon
Spo06054.1.exon.8	Spo06054.1.exon.8	exon
Spo06054.1.exon.7	Spo06054.1.exon.7	exon
Spo06054.1.exon.6	Spo06054.1.exon.6	exon
Spo06054.1.exon.5	Spo06054.1.exon.5	exon
Spo06054.1.exon.4	Spo06054.1.exon.4	exon
Spo06054.1.exon.3	Spo06054.1.exon.3	exon
Spo06054.1.exon.2	Spo06054.1.exon.2	exon
Spo06054.1.exon.1	Spo06054.1.exon.1	exon

Homology

[Close]

BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902233952|gb|KNA23267.1| (hypothetical protein SOVF_026480 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 96.3 bits (238), Expect = 4.800e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1

		  
Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135

[Close]

BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902233951|gb|KNA23266.1| (hypothetical protein SOVF_026480 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 96.3 bits (238), Expect = 4.800e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1

		  
Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135

[Close]

BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902217602|gb|KNA17791.1| (hypothetical protein SOVF_076880 [Spinacia oleracea])

HSP 1 Score: 68.6 bits (166), Expect = 1.100e-8
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEISKYLFQ +GV + K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEISKYLFQ-EGVCYAKKDYNLAKHPDIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. NCBI nr
Match: gi|828330699|ref|XP_012574477.1| (PREDICTED: myb-like protein Q [Cicer arietinum])

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-8
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 1

		  
Query: 13  PTAGLSRSGVLERHLSSHHLSPPISS--ATMIISEKNRKEISKYLFQAKGVYFDKEDYNL 72
           P +  S  G+      ++ LSP  SS  ATMIISEKNR+EI KYLFQ +GV + K+D+NL
Sbjct: 320 PNSSSSNMGI------TNSLSPFPSSYIATMIISEKNRREICKYLFQ-EGVCYAKKDFNL 379

Query: 73  AKHPDIDVPTLPTL 85
           AKHP+IDVP L  +
Sbjct: 380 AKHPEIDVPNLQVI 386

[Close]

BLAST of Spo06054.1 vs. NCBI nr
Match: gi|388521299|gb|AFK48711.1| (unknown [Lotus japonicus])

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-8
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEI KYLFQ +GV F K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEICKYLFQ-EGVCFAKKDYNLAKHPDIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWP8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_026480 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1

		  
Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135

[Close]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUQ8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_026480 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1

		  
Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135

[Close]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076880 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.500e-9
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEISKYLFQ +GV + K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEISKYLFQ-EGVCYAKKDYNLAKHPDIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: I3T869_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.300e-8
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEI KYLFQ +GV F K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEICKYLFQ-EGVCFAKKDYNLAKHPDIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A068U9A3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020087001 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.700e-8
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1

		  
Query: 33  SPP---ISSATMIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
           SPP    S+A MII EKNR+EISKYLFQ +GV + K+D+NLAKHP+IDVP L  +
Sbjct: 52  SPPSSQFSTAAMIIPEKNRREISKYLFQ-EGVCYAKKDFNLAKHPEIDVPNLQVI 105

[Close]

BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS10A_ORYSJ (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.100e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MII +KNR EI KYLFQ +GV + K+DYNLAKHP IDVP L  +
Sbjct: 1  MIIPKKNRNEICKYLFQ-EGVLYAKKDYNLAKHPQIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS10B_ORYSJ (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.100e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MII +KNR EI KYLFQ +GV + K+DYNLAKHP IDVP L  +
Sbjct: 1  MIIPKKNRNEICKYLFQ-EGVLYAKKDYNLAKHPQIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 7.000e-8
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NRKEI KYLF+ +GV F K+D+NLAKHP IDVP L  +
Sbjct: 1  MIISEANRKEICKYLFK-EGVCFAKKDFNLAKHPLIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.500e-7
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NR+EI KYLF+ +GV F K+D+NL KHP IDVP L  +
Sbjct: 1  MIISENNRREICKYLFK-EGVCFAKKDFNLPKHPLIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.900e-9
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NRKEI KYLF+ +GV F K+D+NLAKHP IDVP L  +
Sbjct: 1  MIISEANRKEICKYLFK-EGVCFAKKDFNLAKHPLIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.500e-8
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NR+EI KYLF+ +GV F K+D+NL KHP IDVP L  +
Sbjct: 1  MIISENNRREICKYLFK-EGVCFAKKDFNLPKHPLIDVPNLQVI 43

[Close]

BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.400e-6
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1

		  
Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDID-VPTLPTL 85
          MIISE NR+EISKYLF+ +GV F K+D+NL +HP I+ VP L  +
Sbjct: 1  MIISETNRREISKYLFK-EGVLFAKKDFNLPQHPLIESVPNLQVI 44

The following BLAST results are available for this feature:

BLAST of Spo06054.1 vs. NCBI nr
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
BLAST of Spo06054.1 vs. TAIR (Arabidopsis)

BLAST of Spo06054.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902233952\|gb\|KNA23267.1\|	4.8e-17	85.9	hypothetical protein SOVF_0264...	[more]
gi\|902233951\|gb\|KNA23266.1\|	4.8e-17	85.9	hypothetical protein SOVF_0264...	[more]
gi\|902217602\|gb\|KNA17791.1\|	1.1e-8	77.2	hypothetical protein SOVF_0768...	[more]
gi\|828330699\|ref\|XP_012574477.1\|	1.8e-8	54.0	PREDICTED: myb-like protein Q ...	[more]
gi\|388521299\|gb\|AFK48711.1\|	1.8e-8	77.2	unknown [Lotus japonicus]	[more]

BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RWP8_SPIOL	3.4e-17	85.9	Uncharacterized protein (Fragm...	[more]
A0A0K9RUQ8_SPIOL	3.4e-17	85.9	Uncharacterized protein (Fragm...	[more]
A0A0K9RE56_SPIOL	7.5e-9	77.2	Uncharacterized protein OS=Spi...	[more]
I3T869_LOTJA	1.3e-8	77.2	Uncharacterized protein OS=Lot...	[more]
A0A068U9A3_COFCA	1.7e-8	63.6	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
RS10A_ORYSJ	4.1e-8	65.9	40S ribosomal protein S10-1 OS...	[more]
RS10B_ORYSJ	4.1e-8	65.9	40S ribosomal protein S10-2 OS...	[more]
RS103_ARATH	7.0e-8	68.1	40S ribosomal protein S10-3 OS...	[more]
RS101_ARATH	4.5e-7	63.6	40S ribosomal protein S10-1 OS...	[more]

BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G52650.1	3.9e-9	68.1	RNA binding Plectin/S10 domain...	[more]
AT4G25740.1	2.5e-8	63.6	RNA binding Plectin/S10 domain...	[more]
AT5G41520.1	1.4e-6	60.0	RNA binding Plectin/S10 domain...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 42..81 score: 5.9
None	No IPR available	PANTHER	PTHR12146:SF7	SUBFAMILY NOT NAMED	coord: 42..81 score: 5.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome