Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGAATGACAAACACAACAAGTTCATTAGCAAGACAACAAATAATGAAATGGAATTCACCAATCCCATATTTATTTGGTGGGTTGGCTCTAATACTAGCTGTTATTGCCATAGCACTAGTCATACTAGCTTGCTCCTATCTTTGTAAAAGGAAGCCTCTACCGGCCGGAAAACAAACGACCATGGATGACGTGGTGGTTGTCGACGATGATGTGCCAAAGTTCGTCGTGATCATGGCCGGAGACGATAAGCCCACTTATTTAGCCATGCCTACTATCAACATCGTCTTGCCCACCGCTCACCACGGTTCCGTAACTCCTCCTCCTCCGGCGGCTGTTGCTGACGAGCAGGTCTAG ATGTCAAGAATGACAAACACAACAAGTTCATTAGCAAGACAACAAATAATGAAATGGAATTCACCAATCCCATATTTATTTGGTGGGTTGGCTCTAATACTAGCTGTTATTGCCATAGCACTAGTCATACTAGCTTGCTCCTATCTTTGTAAAAGGAAGCCTCTACCGGCCGGAAAACAAACGACCATGGATGACGTGGTGGTTGTCGACGATGATGTGCCAAAGTTCGTCGTGATCATGGCCGGAGACGATAAGCCCACTTATTTAGCCATGCCTACTATCAACATCGTCTTGCCCACCGCTCACCACGGTTCCGTAACTCCTCCTCCTCCGGCGGCTGTTGCTGACGAGCAGGTCTAG ATGTCAAGAATGACAAACACAACAAGTTCATTAGCAAGACAACAAATAATGAAATGGAATTCACCAATCCCATATTTATTTGGTGGGTTGGCTCTAATACTAGCTGTTATTGCCATAGCACTAGTCATACTAGCTTGCTCCTATCTTTGTAAAAGGAAGCCTCTACCGGCCGGAAAACAAACGACCATGGATGACGTGGTGGTTGTCGACGATGATGTGCCAAAGTTCGTCGTGATCATGGCCGGAGACGATAAGCCCACTTATTTAGCCATGCCTACTATCAACATCGTCTTGCCCACCGCTCACCACGGTTCCGTAACTCCTCCTCCTCCGGCGGCTGTTGCTGACGAGCAGGTCTAG MSRMTNTTSSLARQQIMKWNSPIPYLFGGLALILAVIAIALVILACSYLCKRKPLPAGKQTTMDDVVVVDDDVPKFVVIMAGDDKPTYLAMPTINIVLPTAHHGSVTPPPPAAVADEQV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12298.1 vs. NCBI nr
Match: gi|902107149|gb|KNA03670.1| (hypothetical protein SOVF_206910 [Spinacia oleracea]) HSP 1 Score: 232.3 bits (591), Expect = 4.500e-58 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Spo12298.1 vs. NCBI nr
Match: gi|870867870|gb|KMT18739.1| (hypothetical protein BVRB_2g028610 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 112.1 bits (279), Expect = 6.800e-22 Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 1
BLAST of Spo12298.1 vs. NCBI nr
Match: gi|255579956|ref|XP_002530813.1| (PREDICTED: protein GLUTAMINE DUMPER 5 [Ricinus communis]) HSP 1 Score: 84.7 bits (208), Expect = 1.200e-13 Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Spo12298.1 vs. NCBI nr
Match: gi|731418186|ref|XP_010660581.1| (PREDICTED: protein GLUTAMINE DUMPER 3-like [Vitis vinifera]) HSP 1 Score: 83.6 bits (205), Expect = 2.600e-13 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 1
BLAST of Spo12298.1 vs. NCBI nr
Match: gi|703115454|ref|XP_010100897.1| (hypothetical protein L484_009667 [Morus notabilis]) HSP 1 Score: 83.2 bits (204), Expect = 3.400e-13 Identity = 54/99 (54.55%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8S5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_206910 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 3.200e-58 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D357_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g028610 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.800e-22 Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 1
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Match: B9SXU4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0877440 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.100e-14 Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Match: W9RDY4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000167 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-13 Identity = 54/99 (54.55%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Match: B9SXU5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0877550 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.200e-12 Identity = 50/101 (49.50%), Postives = 59/101 (58.42%), Query Frame = 1
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Match: GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 9.300e-11 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Match: GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 1.600e-10 Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Match: GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.500e-10 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Match: GDU6_ARATH (Protein GLUTAMINE DUMPER 6 OS=Arabidopsis thaliana GN=GDU6 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.600e-10 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Match: GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.000e-9 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 1
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Match: AT4G25760.1 (glutamine dumper 2) HSP 1 Score: 67.8 bits (164), Expect = 5.200e-12 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Match: AT5G24920.1 (glutamine dumper 5) HSP 1 Score: 67.0 bits (162), Expect = 8.900e-12 Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Match: AT5G57685.1 (glutamine dumper 3) HSP 1 Score: 65.9 bits (159), Expect = 2.000e-11 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Match: AT3G30725.1 (glutamine dumper 6) HSP 1 Score: 65.5 bits (158), Expect = 2.600e-11 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Match: AT4G31730.1 (glutamine dumper 1) HSP 1 Score: 64.3 bits (155), Expect = 5.800e-11 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12298.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12298.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12298.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12298.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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