Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCACAAAATCAAACTCTAGACATTTTCTTCCATTCCCTCTCTAAATCTTCATCTATTACTTCTACCACGACCACGACCACAACCACAACCTCTACCTCTTCGTCCTCTGTATCATCGAGCCCTTTTTTGGGCGTCGATAAAAAGTGTAAAGGGTCCAAAAGAGTAAGATTAGACCCTAATGAGAATAATAACAATAACGATAACCATAACAATGATGATCATGATCATGATGATGATGGTAATAATCAGAAAGATGGTCATGACCTAATGTATAGAGGTGTACGGAAGAGGAGTTGGGGAAAATGGGTGTCCGAAATTAGAGAGCCAAAGAAGAAGTCAAGAATATGGCTTGGGACTTACCCAACGGCTCAGATGGCGGCTCGAGCTCATGATGTTGCGGCTTTAGCCATCAAGGGTGACAATGCATTCCTTAACTTCCCTGCACTTGCACATTTATTGCCTCGCCCTGCTTCCACGTGTCCTAAAGATATCCAAGCCGCGGCTGCTAAAGCGGCTGAAGCCGAGCTAATTAGCTGCCCTGCTGCTGCCAGCAGCTCCAGTTCTTGTTCAACCAATGTTAGCTCCTCTTCTTCGGAAGAAAGTAACGTTGAATGGTCTAGCTCTGTGGGACCCACAAGAGTCCATGATGACCATCATCATCATCATCATCATCATAATGTTGTTGATGATGATGAGTCTTTGTTTGACTTGCCTGACCTTGTCATTGAAGATAAAACTCAAAGAATTGGAGGCTATTTTAGTCATTCTACATGGCAATTAGCTCAAGGAGAACCCATGATATTCGGCCTTGATGATGATCAACAGCTAAATTGTTTATGGATGGGTTAA ATGGAACCACAAAATCAAACTCTAGACATTTTCTTCCATTCCCTCTCTAAATCTTCATCTATTACTTCTACCACGACCACGACCACAACCACAACCTCTACCTCTTCGTCCTCTGTATCATCGAGCCCTTTTTTGGGCGTCGATAAAAAGTGTAAAGGGTCCAAAAGAGTAAGATTAGACCCTAATGAGAATAATAACAATAACGATAACCATAACAATGATGATCATGATCATGATGATGATGGTAATAATCAGAAAGATGGTCATGACCTAATGTATAGAGGTGTACGGAAGAGGAGTTGGGGAAAATGGGTGTCCGAAATTAGAGAGCCAAAGAAGAAGTCAAGAATATGGCTTGGGACTTACCCAACGGCTCAGATGGCGGCTCGAGCTCATGATGTTGCGGCTTTAGCCATCAAGGGTGACAATGCATTCCTTAACTTCCCTGCACTTGCACATTTATTGCCTCGCCCTGCTTCCACGTGTCCTAAAGATATCCAAGCCGCGGCTGCTAAAGCGGCTGAAGCCGAGCTAATTAGCTGCCCTGCTGCTGCCAGCAGCTCCAGTTCTTGTTCAACCAATGTTAGCTCCTCTTCTTCGGAAGAAAGTAACGTTGAATGGTCTAGCTCTGTGGGACCCACAAGAGTCCATGATGACCATCATCATCATCATCATCATCATAATGTTGTTGATGATGATGAGTCTTTGTTTGACTTGCCTGACCTTGTCATTGAAGATAAAACTCAAAGAATTGGAGGCTATTTTAGTCATTCTACATGGCAATTAGCTCAAGGAGAACCCATGATATTCGGCCTTGATGATGATCAACAGCTAAATTGTTTATGGATGGGTTAA ATGGAACCACAAAATCAAACTCTAGACATTTTCTTCCATTCCCTCTCTAAATCTTCATCTATTACTTCTACCACGACCACGACCACAACCACAACCTCTACCTCTTCGTCCTCTGTATCATCGAGCCCTTTTTTGGGCGTCGATAAAAAGTGTAAAGGGTCCAAAAGAGTAAGATTAGACCCTAATGAGAATAATAACAATAACGATAACCATAACAATGATGATCATGATCATGATGATGATGGTAATAATCAGAAAGATGGTCATGACCTAATGTATAGAGGTGTACGGAAGAGGAGTTGGGGAAAATGGGTGTCCGAAATTAGAGAGCCAAAGAAGAAGTCAAGAATATGGCTTGGGACTTACCCAACGGCTCAGATGGCGGCTCGAGCTCATGATGTTGCGGCTTTAGCCATCAAGGGTGACAATGCATTCCTTAACTTCCCTGCACTTGCACATTTATTGCCTCGCCCTGCTTCCACGTGTCCTAAAGATATCCAAGCCGCGGCTGCTAAAGCGGCTGAAGCCGAGCTAATTAGCTGCCCTGCTGCTGCCAGCAGCTCCAGTTCTTGTTCAACCAATGTTAGCTCCTCTTCTTCGGAAGAAAGTAACGTTGAATGGTCTAGCTCTGTGGGACCCACAAGAGTCCATGATGACCATCATCATCATCATCATCATCATAATGTTGTTGATGATGATGAGTCTTTGTTTGACTTGCCTGACCTTGTCATTGAAGATAAAACTCAAAGAATTGGAGGCTATTTTAGTCATTCTACATGGCAATTAGCTCAAGGAGAACCCATGATATTCGGCCTTGATGATGATCAACAGCTAAATTGTTTATGGATGGGTTAA MEPQNQTLDIFFHSLSKSSSITSTTTTTTTTTSTSSSSVSSSPFLGVDKKCKGSKRVRLDPNENNNNNDNHNNDDHDHDDDGNNQKDGHDLMYRGVRKRSWGKWVSEIREPKKKSRIWLGTYPTAQMAARAHDVAALAIKGDNAFLNFPALAHLLPRPASTCPKDIQAAAAKAAEAELISCPAAASSSSSCSTNVSSSSSEESNVEWSSSVGPTRVHDDHHHHHHHHNVVDDDESLFDLPDLVIEDKTQRIGGYFSHSTWQLAQGEPMIFGLDDDQQLNCLWMG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13916.1 vs. NCBI nr
Match: gi|902234288|gb|KNA23396.1| (hypothetical protein SOVF_024670 [Spinacia oleracea]) HSP 1 Score: 540.0 bits (1390), Expect = 2.400e-150 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Spo13916.1 vs. NCBI nr
Match: gi|731360968|ref|XP_010692104.1| (PREDICTED: ethylene-responsive transcription factor ERF035 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 318.9 bits (816), Expect = 8.800e-84 Identity = 199/299 (66.56%), Postives = 228/299 (76.25%), Query Frame = 1
BLAST of Spo13916.1 vs. NCBI nr
Match: gi|698558508|ref|XP_009771308.1| (PREDICTED: ethylene-responsive transcription factor ERF039-like [Nicotiana sylvestris]) HSP 1 Score: 155.2 bits (391), Expect = 1.700e-34 Identity = 124/283 (43.82%), Postives = 160/283 (56.54%), Query Frame = 1
BLAST of Spo13916.1 vs. NCBI nr
Match: gi|590723607|ref|XP_007052232.1| (Integrase-type DNA-binding superfamily protein, putative [Theobroma cacao]) HSP 1 Score: 154.1 bits (388), Expect = 3.700e-34 Identity = 124/264 (46.97%), Postives = 163/264 (61.74%), Query Frame = 1
BLAST of Spo13916.1 vs. NCBI nr
Match: gi|604321341|gb|EYU31917.1| (hypothetical protein MIMGU_mgv1a014733mg [Erythranthe guttata]) HSP 1 Score: 153.7 bits (387), Expect = 4.900e-34 Identity = 101/186 (54.30%), Postives = 121/186 (65.05%), Query Frame = 1
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV34_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024670 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 1.700e-150 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EA96_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018210 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 6.100e-84 Identity = 199/299 (66.56%), Postives = 228/299 (76.25%), Query Frame = 1
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Match: A0A061DUB9_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_005639 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.600e-34 Identity = 124/264 (46.97%), Postives = 163/264 (61.74%), Query Frame = 1
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Match: A0A022QT51_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014733mg PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.400e-34 Identity = 101/186 (54.30%), Postives = 121/186 (65.05%), Query Frame = 1
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Match: A0A118JS68_CYNCS (AP2/ERF domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024492 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.400e-34 Identity = 118/260 (45.38%), Postives = 147/260 (56.54%), Query Frame = 1
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.700e-29 Identity = 114/266 (42.86%), Postives = 143/266 (53.76%), Query Frame = 1
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.100e-28 Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 1
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2) HSP 1 Score: 128.3 bits (321), Expect = 1.400e-28 Identity = 119/273 (43.59%), Postives = 152/273 (55.68%), Query Frame = 1
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.300e-28 Identity = 79/121 (65.29%), Postives = 85/121 (70.25%), Query Frame = 1
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.600e-27 Identity = 78/153 (50.98%), Postives = 103/153 (67.32%), Query Frame = 1
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 129.8 bits (325), Expect = 2.700e-30 Identity = 114/266 (42.86%), Postives = 143/266 (53.76%), Query Frame = 1
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 128.6 bits (322), Expect = 5.900e-30 Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 1
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 128.3 bits (321), Expect = 7.800e-30 Identity = 119/273 (43.59%), Postives = 152/273 (55.68%), Query Frame = 1
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Match: AT2G35700.1 (ERF family protein 38) HSP 1 Score: 127.5 bits (319), Expect = 1.300e-29 Identity = 79/121 (65.29%), Postives = 85/121 (70.25%), Query Frame = 1
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 124.0 bits (310), Expect = 1.500e-28 Identity = 78/153 (50.98%), Postives = 103/153 (67.32%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13916.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13916.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13916.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13916.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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