Spo07090 (gene) | SpinachBase

Overview


Name	Spo07090
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	30S ribosomal protein S1
Location	SpoScf_01739 : 12790 .. 17284 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACGATCTTTTAACTAACTTTAGGTGTATGTGAAAACAAGATAGAATTGTTACCATGAAACACAATCACCGCACTTGCCGAGCCATTGGACCATTGCCGCAACAAGTCTATTACTCTTTTCAAGCAAGCAATCGGACCCTCTTACACAACACACACCACTACACCATCAGCCATCAACCAAATCTTGTGCATATTGTTGGGCCAACCAATCTCAAGTTTAACAACCTCTCTCTACCGTATCATCAAACCAACCTCTCTCTCTCCACTCTACTCATCCCCTTATCTGCGTATCTCAACAAACAACAACATAGGAAGAAGATCAAAGAGTAGCAACAATGGCGTCTTTGGCACAGCAACTAGCAGGAGGATTAAGATGCCCACCACTCTCAAACTCCAACCTTTCAAAACCCTTTTCACCCAAACACACCCTTAAGCCTAGATTCTCCCCAATTGTTTCTGCTGTTGCTGTTTCAAATGCACAAACCAGAGAAAGGCAGAAGCTTAAACAGCTTTTTGAAGACGCTTATGAACGCTGTCGTAATGCTCCCATGGAAGGTGTTTCCTTCACCATTGATGATTTTCATACTGCTCTTGATAAGTATGACTTCAATTCCGAAATGGGTTCCAGGGTAATTCTTATTTTTCTTCTTCTTTTGCAAGTTTTTTTAATGGATTTTTGGGTGATTATGTTGGTTTTATGTGATGGGTATTTCTATTTATTCATGATTTTAATTATGTATGTTTTGAGACTATTTATTCTTTAATTTGGGTTGGGATTGAAATTAGACAAATAAAGGTTTAATGCTAGAACTTTGGAATTAGAATTTCAGTATGCGTCTGGTTATTCTAATTTGTTAATTTTATTGGTTGTGGACTTTAATGTTGAAAATGGAAGCTTATATTTGTATAATGGAGTATTGTGGCTTTGATGGTGAATAAGGTGTTGTAGCGTATTGTTTTTGACTTTCGCCTTATTCACCATCAAAGCAAAAAATAACATTCTCCGCAAAAATGATTAAAACTCATATCGCGTTGTGTTGCATCTGGAGGTGGGGGTCTCTGCTGATATCTACTTCACTGACAAAGCTTATCTGCAAGCTTGAAATATAAGAGGCATCTTCTATCATATGCTGCCTTTCGTAATAGAAGAATGCTCTGCTTCCGATTGAGGAGACATATGGACTAGAATCGTTGTGTATTAGGCTCTGTTTGGTGGTAGGGTGTAAAATGTTTTCATGGAAAACGATTTTCCCCATTTCAATCCTTTTATGTTGTTTGGTTTGGCAAAGGATGGAAATTATTTTCTATTACTCCCTCGAGGTGGAAAAAGTTTTTCCATTTGAAAGGGAGGGAAACCACTTTTCCACCTTTCCTCCTTACCTCCCTCTCCCTTCTTCCCCTCAATCTTCACCATCTTCTCCCATTTTCTTTTAAGGAACCAAACAAATGAAAACTAGTTTGGAATTGTATTTTCCCTTGGAAAATATTGTCCATGAGAAATTATTTTACACTGAAAACGTTTTACACCATACCAAATAGAGCCTTAATGTCTTATGGCCATGTCTAAACATGCTCATTTGCTCTTCCTCCCAGACTTTACACTTCTGATTACAACTCTCAAATTTTAGAGCTTTGCTGATAAAGCTGGACCTTTAGTCTACCCCTTTTTAGGAAATATGGTTATTTTTTGGGGTCACGACTTGTATGATGACATTTTTAGTCTTTGCATAGCATTCAATTCATACTTTTCTCTTCTTTTAAGAACATATCAGCTGACAAGGTGGTTTATCAGTAATTGACTAATTGTTGGTCACCTGACTTGCATTAGGAACAGATATAACCCATCTTTTGTCTGCTTATGTATTTCTTTTAGCTTTTCATATGCCATTTTCCATTTCTTTCGGCTCTTTAGAGATGAACTCATTTGCTTTCTTTGCTTTTCCTCAGGTCAAGGGTACAGTATTCTGCACAGATGCCAATGGGGCATTAGTCGATATAACTGCAAAATCTTCGGCATACTTGCCTCTCGCAGAGGCATGTATTTACAGAATAAAAAACGTGGAGGAAGCTGGTATAATCCCAGGTGTACGTGAAGAATTTGTAATCATTGGTGAAAATGAAGCTGATGATAGCTTAATCTTGAGTTTGCGCCAAATCCAGTATGAGCTTGCGTGGGAAAGGTGTAGGCAGTTGCAAGCTGAGGATGTTGTAGTTAAGGGGAAGGTTGGTATTATCTTTCTGACTTTTAATTGCTATTCTTCTTCTGCTATTTGTGTATCACCTATGGTTGGATTGGATGAAATGAACCCTGCGCATCCCATTGAAGTTCTCTTAGCCTGATAACTCACAGTGCTTCAGATCATTTCACGTGCTATTTTCTTTGATTGACTTTTCATGCTGTTGTCCAAACACAATTAGACACTTGAGAGTTTTATTGTGCTGAATATTGGAAGAGATTATATATTTGTTGACCTGTTTAATAATTGATTAATTGATCTTACTTTGTTTTCTTTCTGTCAGATTGTTGGGGCGAACAAAGGTGGTGTGGTGGCTCTAGTGGAAGGCCTTCGTGGTTTTGTTCCCTTTTCGCAAATATCATCTGTTAGTTTCTTCATCTTGCTTGCTTTTTGCGTAAAGCTATATTTATTTGTTCCAATAATGTATTAATGTTATTTTACACATACCTAGGGCCTAATAATATGTTGTCATGTTTCTGTATCAGAAATCCTCTGCAGAAGAACTTCTTGAGAAAGAGATCCCTCTAAAGTTTGTTGAGGTTGATGAGGAACAATCCAGGTTGGTAATGAGTAACCGCAAGGCCATGGCTGACAGCCAGGCACAGCTTGGTATTGGATCAGTTGTCACAGGAACTGTTCAATCTCTTAAACCTTACGGTGCCTTTATTGATATTGGTGGAATTAATGGGCTTCTTCATGTTAGTCAAATCAGTCATGATCGTGTCTCGGATATTGCAACTGTCCTACAACCTGGTGACACTTTGAAGGTATTCCTTGATATAATTGCTGTAGAAAATGAATTAACCTTTTAATACTGAAATATGATTAAATGCTTGAAATATGCAGGTCATGATTTTGAGCCATGACCGTGAAAGAGGTAGGGTGAGTCTGTCGACAAAGAAGTTGGAACCTACTCCTGGTGACATGATTCGTAATCCGAAGCTTGTCTTTGAGAAGGTACTTTACCCCCTTTATTTCTCCTATTTGATAGTCGAGGTCTTCCTTTTGAAAGTACTTCCTCCATTTTTATTTAGTTGCAACACTTCATTTCATCTATCCATGGATAGTTTTCCACATCATCATCTCAGAGTACGTGCTCCCTCAGTCACTTTGAGTACTATTTTGCTATGGGTACCTACGTGACTGGGTATGAAGGTTTACTATATGCTGATCTTGAACTTTGCTGTCTTTTCACTTAAGAGGTCCTCTCTTATGTATCTTCAAGGAAGGAAGGGAGGAGGAAATTCTTGATGTGCTTTCAGTTAATTTTATGAATTATGTTCGCAATTTAAAGTTTCATGATCGAAGCCAAAGTAGGAACATTAAGAAACTAGACAAAAGATAGTTCCTTAGTTTCTTCTGAGTAATGTAAGACATCCATCAAACTAACCATTTATGTCATGATAACCAGGCTGAGGAGATGGCTCAAACATTCAGACAAAGGATTGCACAAGCAGAGGCCATGGCTCGTGCTGACATGCTCAGATTCCAGCCTGAGGTATTAGCATGCATTTTGTTAGCTTAGAATGATTACTTGCAATGTTCTGTTCAGAACTACATTTATATAAGATACATATCTGTAACGATAAGTTGCCTTGTGAAAAATATTGGTGATCTTATTTTTTCTTTCAACCTGTTGAACTTGCAGAGCGGTCTCACTCTCAGCTCAGATGGAATCTTAGGTCCACTAACTTCAGATTTACCAGCAGAGGGTCTAGATTTAAGTGTTGTTCCACCCGCAGTTGAATCTTAAAAATAGTTGCGCTTGTTAGTTTTTGGTTATGTATGTTAGCTTGTAACGAAATCCGTCCAATTCTGTCTGGTAATCTTGTGTTATTGTCCTGCAAAATATACGTATTGTTTGTATTATTATAGTATAAATGCAGTCAGATATATTTGTGAGAGGCAATAGATTAACTGGTGCCTACCCATCATTACATGTTTACATTAAAGACCATTCCTTGGCCATCTTCATATTGCAGTTCTTGTACAATGTCAACCACTTCAACTGTACGGCATTCTGAAGCAGATACTTCAGCAAAATGAAGTCTGATTCGTTGCCATAAAAATGATAAACTTCAATAACCTCCGCGTGCAGTGAGAAAGGAACCTGATCTCCTATATCTGGAAGCCACTTTTTTAGCTCTTGAGCGTTGTAATGATTCTTGATCAAGCCCTAATGAAGGAAGTATTTGCCAGGAAGGTGAGTAGAATCACCAAGATATTAAGCAGTCTACGTTACAATAGAAGTTACTCC

mRNA sequence

TAACGATCTTTTAACTAACTTTAGGTGTATGTGAAAACAAGATAGAATTGTTACCATGAAACACAATCACCGCACTTGCCGAGCCATTGGACCATTGCCGCAACAAGTCTATTACTCTTTTCAAGCAAGCAATCGGACCCTCTTACACAACACACACCACTACACCATCAGCCATCAACCAAATCTTGTGCATATTGTTGGGCCAACCAATCTCAAGTTTAACAACCTCTCTCTACCGTATCATCAAACCAACCTCTCTCTCTCCACTCTACTCATCCCCTTATCTGCGTATCTCAACAAACAACAACATAGGAAGAAGATCAAAGAGTAGCAACAATGGCGTCTTTGGCACAGCAACTAGCAGGAGGATTAAGATGCCCACCACTCTCAAACTCCAACCTTTCAAAACCCTTTTCACCCAAACACACCCTTAAGCCTAGATTCTCCCCAATTGTTTCTGCTGTTGCTGTTTCAAATGCACAAACCAGAGAAAGGCAGAAGCTTAAACAGCTTTTTGAAGACGCTTATGAACGCTGTCGTAATGCTCCCATGGAAGGTGTTTCCTTCACCATTGATGATTTTCATACTGCTCTTGATAAGTATGACTTCAATTCCGAAATGGGTTCCAGGGTCAAGGGTACAGTATTCTGCACAGATGCCAATGGGGCATTAGTCGATATAACTGCAAAATCTTCGGCATACTTGCCTCTCGCAGAGGCATGTATTTACAGAATAAAAAACGTGGAGGAAGCTGGTATAATCCCAGGTGTACGTGAAGAATTTGTAATCATTGGTGAAAATGAAGCTGATGATAGCTTAATCTTGAGTTTGCGCCAAATCCAGTATGAGCTTGCGTGGGAAAGGTGTAGGCAGTTGCAAGCTGAGGATGTTGTAGTTAAGGGGAAGATTGTTGGGGCGAACAAAGGTGGTGTGGTGGCTCTAGTGGAAGGCCTTCGTGGTTTTGTTCCCTTTTCGCAAATATCATCTAAATCCTCTGCAGAAGAACTTCTTGAGAAAGAGATCCCTCTAAAGTTTGTTGAGGTTGATGAGGAACAATCCAGGTTGGTAATGAGTAACCGCAAGGCCATGGCTGACAGCCAGGCACAGCTTGGTATTGGATCAGTTGTCACAGGAACTGTTCAATCTCTTAAACCTTACGGTGCCTTTATTGATATTGGTGGAATTAATGGGCTTCTTCATGTTAGTCAAATCAGTCATGATCGTGTCTCGGATATTGCAACTGTCCTACAACCTGGTGACACTTTGAAGGTCATGATTTTGAGCCATGACCGTGAAAGAGGTAGGGTGAGTCTGTCGACAAAGAAGTTGGAACCTACTCCTGGTGACATGATTCGTAATCCGAAGCTTGTCTTTGAGAAGGCTGAGGAGATGGCTCAAACATTCAGACAAAGGATTGCACAAGCAGAGGCCATGGCTCGTGCTGACATGCTCAGATTCCAGCCTGAGAGCGGTCTCACTCTCAGCTCAGATGGAATCTTAGGTCCACTAACTTCAGATTTACCAGCAGAGGGTCTAGATTTAAGTGTTGTTCCACCCGCAGTTGAATCTTAAAAATAGTTGCGCTTGTTAGTTTTTGGTTATGTATGTTAGCTTGTAACGAAATCCGTCCAATTCTGTCTGGTAATCTTGTGTTATTGTCCTGCAAAATATACGTATTGTTTGTATTATTATAGTATAAATGCAGTCAGATATATTTGTGAGAGGCAATAGATTAACTGGTGCCTACCCATCATTACATGTTTACATTAAAGACCATTCCTTGGCCATCTTCATATTGCAGTTCTTGTACAATGTCAACCACTTCAACTGTACGGCATTCTGAAGCAGATACTTCAGCAAAATGAAGTCTGATTCGTTGCCATAAAAATGATAAACTTCAATAACCTCCGCGTGCAGTGAGAAAGGAACCTGATCTCCTATATCTGGAAGCCACTTTTTTAGCTCTTGAGCGTTGTAATGATTCTTGATCAAGCCCTAATGAAGGAAGTATTTGCCAGGAAGGTGAGTAGAATCACCAAGATATTAAGCAGTCTACGTTACAATAGAAGTTACTCC

Coding sequence (CDS)

ATGGCGTCTTTGGCACAGCAACTAGCAGGAGGATTAAGATGCCCACCACTCTCAAACTCCAACCTTTCAAAACCCTTTTCACCCAAACACACCCTTAAGCCTAGATTCTCCCCAATTGTTTCTGCTGTTGCTGTTTCAAATGCACAAACCAGAGAAAGGCAGAAGCTTAAACAGCTTTTTGAAGACGCTTATGAACGCTGTCGTAATGCTCCCATGGAAGGTGTTTCCTTCACCATTGATGATTTTCATACTGCTCTTGATAAGTATGACTTCAATTCCGAAATGGGTTCCAGGGTCAAGGGTACAGTATTCTGCACAGATGCCAATGGGGCATTAGTCGATATAACTGCAAAATCTTCGGCATACTTGCCTCTCGCAGAGGCATGTATTTACAGAATAAAAAACGTGGAGGAAGCTGGTATAATCCCAGGTGTACGTGAAGAATTTGTAATCATTGGTGAAAATGAAGCTGATGATAGCTTAATCTTGAGTTTGCGCCAAATCCAGTATGAGCTTGCGTGGGAAAGGTGTAGGCAGTTGCAAGCTGAGGATGTTGTAGTTAAGGGGAAGATTGTTGGGGCGAACAAAGGTGGTGTGGTGGCTCTAGTGGAAGGCCTTCGTGGTTTTGTTCCCTTTTCGCAAATATCATCTAAATCCTCTGCAGAAGAACTTCTTGAGAAAGAGATCCCTCTAAAGTTTGTTGAGGTTGATGAGGAACAATCCAGGTTGGTAATGAGTAACCGCAAGGCCATGGCTGACAGCCAGGCACAGCTTGGTATTGGATCAGTTGTCACAGGAACTGTTCAATCTCTTAAACCTTACGGTGCCTTTATTGATATTGGTGGAATTAATGGGCTTCTTCATGTTAGTCAAATCAGTCATGATCGTGTCTCGGATATTGCAACTGTCCTACAACCTGGTGACACTTTGAAGGTCATGATTTTGAGCCATGACCGTGAAAGAGGTAGGGTGAGTCTGTCGACAAAGAAGTTGGAACCTACTCCTGGTGACATGATTCGTAATCCGAAGCTTGTCTTTGAGAAGGCTGAGGAGATGGCTCAAACATTCAGACAAAGGATTGCACAAGCAGAGGCCATGGCTCGTGCTGACATGCTCAGATTCCAGCCTGAGAGCGGTCTCACTCTCAGCTCAGATGGAATCTTAGGTCCACTAACTTCAGATTTACCAGCAGAGGGTCTAGATTTAAGTGTTGTTCCACCCGCAGTTGAATCTTAA

Protein sequence

MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo07090.1	Spo07090.1	mRNA

Homology

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BLAST of Spo07090.1 vs. NCBI nr
Match: gi|133872|sp|P29344.1|RR1_SPIOL (RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor)

HSP 1 Score: 788.5 bits (2035), Expect = 5.700e-225
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS
Sbjct: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL
Sbjct: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ
Sbjct: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES
Sbjct: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 411

[Close]

BLAST of Spo07090.1 vs. NCBI nr
Match: gi|731323749|ref|XP_010672600.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 726.1 bits (1873), Expect = 3.500e-206
Identity = 377/413 (91.28%), Postives = 397/413 (96.13%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGL--RCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQ 60
           MASLAQQLAGGL  RCPPLSNS+LSKPFS KH LKPR SPIVSAVAVSNAQTRER KLKQ
Sbjct: 1   MASLAQQLAGGLSLRCPPLSNSHLSKPFSSKHALKPRASPIVSAVAVSNAQTRERAKLKQ 60

Query: 61  LFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAK 120
           LFEDAYERCR AP +GV+FT++DFHTALDKYDFNSE+G+RVKGTVFCTD NGALVDITAK
Sbjct: 61  LFEDAYERCRIAPTQGVAFTLEDFHTALDKYDFNSELGTRVKGTVFCTDNNGALVDITAK 120

Query: 121 SSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCR 180
           SSAYLPL EACI+RIK+VEEAGI+PG+R+EFVIIGENEADDSLILSLR IQYELAWERCR
Sbjct: 121 SSAYLPLQEACIHRIKHVEEAGIVPGLRDEFVIIGENEADDSLILSLRSIQYELAWERCR 180

Query: 181 QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDE 240
           QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQ+S+KS+AEELLEKE+PLKFVEVDE
Sbjct: 181 QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQVSTKSTAEELLEKELPLKFVEVDE 240

Query: 241 EQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 300
           EQSRLV+SNRKAMADSQAQLGIGSVVTG+VQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 241 EQSRLVLSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 300

Query: 301 DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 360
           DIATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ
Sbjct: 301 DIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 360

Query: 361 RIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           RIAQAEAMARADMLRFQPESGLTLSSDGILGP+TSDLP EGLDLS VP A +S
Sbjct: 361 RIAQAEAMARADMLRFQPESGLTLSSDGILGPVTSDLPPEGLDLSAVPAAEQS 413

[Close]

BLAST of Spo07090.1 vs. NCBI nr
Match: gi|225432062|ref|XP_002280604.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera])

HSP 1 Score: 699.9 bits (1805), Expect = 2.600e-198
Identity = 360/411 (87.59%), Postives = 390/411 (94.89%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MA LAQQ  G LRCPP+S+S LSKPFSPK   KP F  IVSAVA+SNAQT+ER KLK++F
Sbjct: 1   MACLAQQFTG-LRCPPISSSRLSKPFSPKQPQKPSFVRIVSAVAISNAQTKERLKLKEMF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           EDAYERCR AP EGVSF+ DDF++ALDKYDFNSE+G++VKGTVFCTD NGALVDITAKSS
Sbjct: 61  EDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLP+ EACI++IK+VEEAGI+PGVREEFVIIGENEADDSLILSLR IQY+LAWERCRQL
Sbjct: 121 AYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGK+VGANKGGVVALVEGLRGFVPFSQISSK++AEELL+KE+P+KFVEVDEEQ
Sbjct: 181 QAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 241 SRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           ATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 ATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           AQAEAMARADMLRFQPESGLTL+SDGILGP+++DLPAEGLDLS VPPA +S
Sbjct: 361 AQAEAMARADMLRFQPESGLTLNSDGILGPVSADLPAEGLDLSDVPPAEDS 410

[Close]

BLAST of Spo07090.1 vs. NCBI nr
Match: gi|720047604|ref|XP_010270863.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 687.2 bits (1772), Expect = 1.800e-194
Identity = 355/408 (87.01%), Postives = 382/408 (93.63%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MASLAQQ  GGLRCPPL +S  SKP S K   K  FS +VSAVA+SNAQT+ERQKLK +F
Sbjct: 1   MASLAQQF-GGLRCPPLPSSRFSKPISQKPQ-KATFSRVVSAVAISNAQTKERQKLKDMF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           E+AYERCR AP EGVSFT++DFH ALDKYDFNSE+G++VKGTVFCTD NGALVDITAKSS
Sbjct: 61  EEAYERCRTAPTEGVSFTLEDFHNALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLP+ E CI++IK+VEEAGI+PG+REEFVIIGENEADDSLILSLR IQYELAWERCRQL
Sbjct: 121 AYLPVQETCIHKIKHVEEAGIVPGLREEFVIIGENEADDSLILSLRSIQYELAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGKIVG N+GGVVA+VEGLRGFVPFSQIS+KS+AEELL+KE+PLKFVEVDEEQ
Sbjct: 181 QAEDVVVKGKIVGGNRGGVVAIVEGLRGFVPFSQISTKSTAEELLDKELPLKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLH+SQISHDRVSDI
Sbjct: 241 SRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHISQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           +TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 STVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPA 409
           AQAEAMARADMLRFQPESGLTLSSDGILGPLT +LP EGLDLS VP A
Sbjct: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTQELPVEGLDLSDVPSA 406

[Close]

BLAST of Spo07090.1 vs. NCBI nr
Match: gi|702447127|ref|XP_010024828.1| (PREDICTED: 30S ribosomal protein S1, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 684.1 bits (1764), Expect = 1.500e-193
Identity = 357/415 (86.02%), Postives = 386/415 (93.01%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKP---RFSP---IVSAVAVSNAQTRERQ 60
           MASLAQQ  G LRCPPLS S LS PF+P H  +    R  P   +VSAVA+SNA+TR+R 
Sbjct: 1   MASLAQQFTG-LRCPPLSRSRLSDPFAPPHRRRQAPARPGPSKTVVSAVAISNARTRDRN 60

Query: 61  KLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVD 120
           +LK LF+DAYERCR APMEGV+FT++DFHTALDKYDFNSE+G++VKGTVFCTD NGALVD
Sbjct: 61  ELKHLFDDAYERCRTAPMEGVAFTLEDFHTALDKYDFNSELGTKVKGTVFCTDGNGALVD 120

Query: 121 ITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAW 180
           ITAKSSA LP+ EACI+RIK+VEEAGI+PG++EEFVIIGENEADDSLILSLR IQY+LAW
Sbjct: 121 ITAKSSALLPVQEACIHRIKHVEEAGIVPGMKEEFVIIGENEADDSLILSLRTIQYDLAW 180

Query: 181 ERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFV 240
           ERCRQLQAEDVVVKGK+VGANKGGVVA+VEGLRGFVPFSQIS+K+ AEEL+EKE+PLKFV
Sbjct: 181 ERCRQLQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKTIAEELIEKELPLKFV 240

Query: 241 EVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300
           EVDEEQSRLV+SNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360
           DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAV 410
           TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPL+SDLPAEGLDLS VP AV
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLSSDLPAEGLDLSDVPAAV 414

[Close]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6V0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099990 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 3.900e-225
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS
Sbjct: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL
Sbjct: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ
Sbjct: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES
Sbjct: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 411

[Close]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTT9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059770 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 2.400e-206
Identity = 377/413 (91.28%), Postives = 397/413 (96.13%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGL--RCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQ 60
           MASLAQQLAGGL  RCPPLSNS+LSKPFS KH LKPR SPIVSAVAVSNAQTRER KLKQ
Sbjct: 1   MASLAQQLAGGLSLRCPPLSNSHLSKPFSSKHALKPRASPIVSAVAVSNAQTRERAKLKQ 60

Query: 61  LFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAK 120
           LFEDAYERCR AP +GV+FT++DFHTALDKYDFNSE+G+RVKGTVFCTD NGALVDITAK
Sbjct: 61  LFEDAYERCRIAPTQGVAFTLEDFHTALDKYDFNSELGTRVKGTVFCTDNNGALVDITAK 120

Query: 121 SSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCR 180
           SSAYLPL EACI+RIK+VEEAGI+PG+R+EFVIIGENEADDSLILSLR IQYELAWERCR
Sbjct: 121 SSAYLPLQEACIHRIKHVEEAGIVPGLRDEFVIIGENEADDSLILSLRSIQYELAWERCR 180

Query: 181 QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDE 240
           QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQ+S+KS+AEELLEKE+PLKFVEVDE
Sbjct: 181 QLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQVSTKSTAEELLEKELPLKFVEVDE 240

Query: 241 EQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 300
           EQSRLV+SNRKAMADSQAQLGIGSVVTG+VQSLKPYGAFIDIGGINGLLHVSQISHDRVS
Sbjct: 241 EQSRLVLSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVS 300

Query: 301 DIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 360
           DIATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ
Sbjct: 301 DIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ 360

Query: 361 RIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           RIAQAEAMARADMLRFQPESGLTLSSDGILGP+TSDLP EGLDLS VP A +S
Sbjct: 361 RIAQAEAMARADMLRFQPESGLTLSSDGILGPVTSDLPPEGLDLSAVPAAEQS 413

[Close]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Match: D7SYG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00450 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 1.800e-198
Identity = 360/411 (87.59%), Postives = 390/411 (94.89%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MA LAQQ  G LRCPP+S+S LSKPFSPK   KP F  IVSAVA+SNAQT+ER KLK++F
Sbjct: 1   MACLAQQFTG-LRCPPISSSRLSKPFSPKQPQKPSFVRIVSAVAISNAQTKERLKLKEMF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           EDAYERCR AP EGVSF+ DDF++ALDKYDFNSE+G++VKGTVFCTD NGALVDITAKSS
Sbjct: 61  EDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLP+ EACI++IK+VEEAGI+PGVREEFVIIGENEADDSLILSLR IQY+LAWERCRQL
Sbjct: 121 AYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGK+VGANKGGVVALVEGLRGFVPFSQISSK++AEELL+KE+P+KFVEVDEEQ
Sbjct: 181 QAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEELLDKELPVKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 241 SRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           ATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 ATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           AQAEAMARADMLRFQPESGLTL+SDGILGP+++DLPAEGLDLS VPPA +S
Sbjct: 361 AQAEAMARADMLRFQPESGLTLNSDGILGPVSADLPAEGLDLSDVPPAEDS 410

[Close]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Match: A0A059B550_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04084 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.000e-193
Identity = 357/415 (86.02%), Postives = 386/415 (93.01%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKP---RFSP---IVSAVAVSNAQTRERQ 60
           MASLAQQ  G LRCPPLS S LS PF+P H  +    R  P   +VSAVA+SNA+TR+R 
Sbjct: 1   MASLAQQFTG-LRCPPLSRSRLSDPFAPPHRRRQAPARPGPSKTVVSAVAISNARTRDRN 60

Query: 61  KLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVD 120
           +LK LF+DAYERCR APMEGV+FT++DFHTALDKYDFNSE+G++VKGTVFCTD NGALVD
Sbjct: 61  ELKHLFDDAYERCRTAPMEGVAFTLEDFHTALDKYDFNSELGTKVKGTVFCTDGNGALVD 120

Query: 121 ITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAW 180
           ITAKSSA LP+ EACI+RIK+VEEAGI+PG++EEFVIIGENEADDSLILSLR IQY+LAW
Sbjct: 121 ITAKSSALLPVQEACIHRIKHVEEAGIVPGMKEEFVIIGENEADDSLILSLRTIQYDLAW 180

Query: 181 ERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFV 240
           ERCRQLQAEDVVVKGK+VGANKGGVVA+VEGLRGFVPFSQIS+K+ AEEL+EKE+PLKFV
Sbjct: 181 ERCRQLQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKTIAEELIEKELPLKFV 240

Query: 241 EVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISH 300
           EVDEEQSRLV+SNRKAMADSQAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISH
Sbjct: 241 EVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISH 300

Query: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360
           DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
Sbjct: 301 DRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ 360

Query: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAV 410
           TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPL+SDLPAEGLDLS VP AV
Sbjct: 361 TFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLSSDLPAEGLDLSDVPAAV 414

[Close]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Match: M5XQU6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006438mg PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.300e-191
Identity = 353/409 (86.31%), Postives = 379/409 (92.67%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKP-FSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQL 60
           MASLAQQ  G LRCPPLS S LSKP   PK        P+VSAVA+SNAQT+ER KLK+L
Sbjct: 1   MASLAQQFTG-LRCPPLSTSRLSKPSVFPKQNKMAGLLPVVSAVAISNAQTKERLKLKEL 60

Query: 61  FEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKS 120
           FEDA+ERCR APMEGVSF +D F++AL+KYDFNSE+G++VKGTVF  D  GALVDITAKS
Sbjct: 61  FEDAHERCRTAPMEGVSFNLDSFYSALEKYDFNSEIGTKVKGTVFNIDNYGALVDITAKS 120

Query: 121 SAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQ 180
           SAYLP+ EACI++IK+VEE GI+PGVREEFVIIGENEADDSLILSL+ IQY+LAWERCRQ
Sbjct: 121 SAYLPVQEACIHKIKSVEEVGIVPGVREEFVIIGENEADDSLILSLKSIQYDLAWERCRQ 180

Query: 181 LQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEE 240
           LQAEDVVVKGK+VGANKGGVVA+VEGLRGFVPFSQIS+KS+AEELL+KEIPLKFVEVDEE
Sbjct: 181 LQAEDVVVKGKVVGANKGGVVAVVEGLRGFVPFSQISTKSTAEELLDKEIPLKFVEVDEE 240

Query: 241 QSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 300
           QSRLV+SNRKAMAD+QAQLGIGSVV GTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD
Sbjct: 241 QSRLVLSNRKAMADNQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSD 300

Query: 301 IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQR 360
           IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQR
Sbjct: 301 IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQR 360

Query: 361 IAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPA 409
           IAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLP EGLDLS VPPA
Sbjct: 361 IAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPVEGLDLSDVPPA 408

[Close]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 3.500e-227
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60
           MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF
Sbjct: 1   MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLF 60

Query: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120
           EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS
Sbjct: 61  EDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSS 120

Query: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180
           AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL
Sbjct: 121 AYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQL 180

Query: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240
           QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ
Sbjct: 181 QAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQ 240

Query: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300
           SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
Sbjct: 241 SRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI 300

Query: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360
           ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
Sbjct: 301 ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 360

Query: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 412
           AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES
Sbjct: 361 AQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPAVES 411

[Close]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Match: RPS1_ARATH (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 1.500e-180
Identity = 334/416 (80.29%), Postives = 381/416 (91.59%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSN-LSKPFS---PKHTLKPRFSPIVSAVAVSNAQTRERQKL 60
           MASLAQQ +G LRC PLS+S+ LS+  S   P++        IV+AVA+S+ QT+ER +L
Sbjct: 1   MASLAQQFSG-LRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLEL 60

Query: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120
           K++FEDAYERCR +PMEGV+FT+DDF  A+++YDFNSE+G+RVKGTVF TDANGALVDI+
Sbjct: 61  KKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDIS 120

Query: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180
           AKSSAYL + +ACI+RIK+VEEAGI+PG+ EEFVIIGENE+DDSL+LSLR IQYELAWER
Sbjct: 121 AKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240
           CRQLQAEDV+VK K++GANKGG+VALVEGLRGFVPFSQISSK++AEELLEKEIPLKFVEV
Sbjct: 181 CRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300
           DEEQ++LV+SNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 241 DEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           VSDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSV--VPPAVE 411
           RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPL S+LP +G+DL+V  +P AV+
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSAVD 415

[Close]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4)

HSP 1 Score: 294.7 bits (753), Expect = 1.600e-78
Identity = 144/296 (48.65%), Postives = 212/296 (71.62%), Query Frame = 1


		  
Query: 68  RNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAE 127
           ++ P   + FT +DF   LD+YD++   G  V GTVF  +  GAL+DI AK++A+LP+ E
Sbjct: 4   QDIPAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQE 63

Query: 128 ACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVV 187
             I R+++ EE  + P    EF I+ +   D  L LS+R+I+Y  AWER RQLQ ED  V
Sbjct: 64  MSINRVESPEEV-LQPSEMREFFILSDENEDGQLTLSIRRIEYMRAWERVRQLQTEDATV 123

Query: 188 KGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRLVMSN 247
           + ++   N+GG +  +EGLRGF+P S IS++ + E+L+ +E+PLKF+EVDE+++RLV+S+
Sbjct: 124 RSEVFATNRGGALVRIEGLRGFIPGSHISTRKAKEDLVGEELPLKFLEVDEDRNRLVLSH 183

Query: 248 RKAMADSQA-QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQP 307
           R+A+ + +  +L +G VV G V+ +KPYGAFIDIGG++GLLH+S+ISHD +    +V   
Sbjct: 184 RRALVERKMNRLEVGEVVVGAVRGIKPYGAFIDIGGVSGLLHISEISHDHIETPHSVFNV 243

Query: 308 GDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQ 363
            D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++ Q
Sbjct: 244 NDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVRNPEVVYEKAEEMAAQYREKLKQ 298

[Close]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Match: RS1A_SYNY3 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1A PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.800e-75
Identity = 145/294 (49.32%), Postives = 210/294 (71.43%), Query Frame = 1


		  
Query: 75  VSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIK 134
           + FT++DF   LDKYD++   G  V GTVF  ++ GAL+DI AK++AY+P+ E  I R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 135 NVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGA 194
           + EE       RE F++  ENE D  L LS+R+I+Y  AWER RQLQAED  V+  +   
Sbjct: 70  DPEEVLQPNETREFFILTDENE-DGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFAT 129

Query: 195 NKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADS 254
           N+GG +  +EGLRGF+P S IS++ + E+L+ +++PLKF+EVDEE++RLV+S+R+A+ + 
Sbjct: 130 NRGGALVRIEGLRGFIPGSHISAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVER 189

Query: 255 QAQ-LGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVM 314
           +   L +  VV G+V+ +KPYGAFIDIGG++GLLH+S+ISHD +    +V    D +KVM
Sbjct: 190 KMNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 249

Query: 315 ILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQ-RIAQAEAM 367
           I+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ R+A+A+ +
Sbjct: 250 IIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMADEMAEIFRQKRLAEAQGI 302

[Close]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Match: RS1_SYNE7 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.500e-44
Identity = 98/282 (34.75%), Postives = 166/282 (58.87%), Query Frame = 1


		  
Query: 80  DDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEA 139
           DDF  AL+    +S+ G  V+G V     +GA +DI  K+ A+LP  EA ++ + ++E A
Sbjct: 12  DDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLE-A 71

Query: 140 GIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGV 199
            +      EF++I +   D  + +SLR +  E AW R  +LQ     V+ K+ G+NKGGV
Sbjct: 72  HLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGV 131

Query: 200 VALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQA-QL 259
            A +EGLR F+P S ++ K   + L  K + + F+EV+    +LV+S R+A   +   ++
Sbjct: 132 TADLEGLRAFIPRSHLNEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREI 191

Query: 260 GIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHD 319
            +G ++ G V  LKP+G F+D+GG   LL ++QIS   V+D+  + + GD ++ ++++ D
Sbjct: 192 EVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAID 251

Query: 320 RERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI 361
             +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Sbjct: 252 NTKGRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Match: AT5G30510.1 (ribosomal protein S1)

HSP 1 Score: 633.6 bits (1633), Expect = 8.200e-182
Identity = 334/416 (80.29%), Postives = 381/416 (91.59%), Query Frame = 1


		  
Query: 1   MASLAQQLAGGLRCPPLSNSN-LSKPFS---PKHTLKPRFSPIVSAVAVSNAQTRERQKL 60
           MASLAQQ +G LRC PLS+S+ LS+  S   P++        IV+AVA+S+ QT+ER +L
Sbjct: 1   MASLAQQFSG-LRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLEL 60

Query: 61  KQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDIT 120
           K++FEDAYERCR +PMEGV+FT+DDF  A+++YDFNSE+G+RVKGTVF TDANGALVDI+
Sbjct: 61  KKMFEDAYERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDIS 120

Query: 121 AKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWER 180
           AKSSAYL + +ACI+RIK+VEEAGI+PG+ EEFVIIGENE+DDSL+LSLR IQYELAWER
Sbjct: 121 AKSSAYLSVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWER 180

Query: 181 CRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEELLEKEIPLKFVEV 240
           CRQLQAEDV+VK K++GANKGG+VALVEGLRGFVPFSQISSK++AEELLEKEIPLKFVEV
Sbjct: 181 CRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEELLEKEIPLKFVEV 240

Query: 241 DEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDR 300
           DEEQ++LV+SNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQISHDR
Sbjct: 241 DEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAFIDIGGINGLLHVSQISHDR 300

Query: 301 VSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360
           VSDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF
Sbjct: 301 VSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 360

Query: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSV--VPPAVE 411
           RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPL S+LP +G+DL+V  +P AV+
Sbjct: 361 RQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSELPDDGVDLTVDDIPSAVD 415

[Close]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Match: AT1G71720.1 (Nucleic acid-binding proteins superfamily)

HSP 1 Score: 103.2 bits (256), Expect = 3.900e-22
Identity = 64/205 (31.22%), Postives = 122/205 (59.51%), Query Frame = 1


		  
Query: 162 ILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSA 221
           +LS R+    +AW R RQ++  +  ++ KI   N GG++  +EGLR F+P  ++  K + 
Sbjct: 261 LLSSRRYFRRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNT 320

Query: 222 EELLEKEIPLKFV----EVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 281
              L++ +  +F+     ++E+++ L++S +  +A  +  L  G+++ GTV  + PYGA 
Sbjct: 321 FTELKENVGRRFLVQITRLNEDKNDLILSEK--VAWEKLYLREGTLLEGTVVKILPYGAQ 380

Query: 282 IDIG--GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 341
           + +G    +GLLH+S I+  R+  ++ VLQ  +++KV+++       ++SLS   LE  P
Sbjct: 381 VKLGDSSRSGLLHISNITRRRIGSVSDVLQVDESVKVLVVK-SLFPDKISLSIADLESEP 440

Query: 342 GDMIRNPKLVFEKAEEMAQTFRQRI 361
           G  I + + VF +AEEMA+ +R+++
Sbjct: 441 GLFISDREKVFTEAEEMAKKYREKM 462

[Close]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily)

HSP 1 Score: 101.7 bits (252), Expect = 1.100e-21
Identity = 58/180 (32.22%), Postives = 101/180 (56.11%), Query Frame = 1


		  
Query: 174 WERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEE---------- 233
           W+  +         +G++ G N GG++     L GF+P+ Q+S   S +E          
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 234 -LLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQ-LGIGSVVTGTVQSLKPYGAFIDIG 293
            L+  ++P+K V+ DEE  +L++S + A+    +Q + +G V  G V S++ YGAFI + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 294 ------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 336
                  + GL+HVS++S D V D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Match: AT5G14580.1 (polyribonucleotide nucleotidyltransferase, putative)

HSP 1 Score: 68.9 bits (167), Expect = 8.100e-12
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 1


		  
Query: 234 VEVDEEQSRLVMSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGIN 293
           + +D     +V  N+  M  +Q Q        L +G V  GTV S+K YGAF++  GG  
Sbjct: 643 LSIDNGTLTIVAKNQDVMEKAQEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQ 702

Query: 294 GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 336
           GLLH+S++SH+ VS ++ VL  G  +  M +  D  RG + LS K L P P
Sbjct: 703 GLLHMSELSHEPVSKVSDVLDIGQCITTMCIETD-VRGNIKLSRKALLPKP 752

[Close]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Match: AT4G29060.1 (elongation factor Ts family protein)

HSP 1 Score: 62.4 bits (150), Expect = 7.600e-10
Identity = 29/76 (38.16%), Postives = 52/76 (68.42%), Query Frame = 1


		  
Query: 261 GSVVTGTVQSLKPYGAFIDIGGI-NGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDR 320
           G+  TG V++++P+GAF+D G   +GL+HVSQ+S + V D+++V+  G  +KV ++  D 
Sbjct: 136 GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADI 195

Query: 321 ERGRVSLSTKKLEPTP 336
           E  R+SL+ ++ +  P
Sbjct: 196 ESKRISLTMRENDDPP 211

The following BLAST results are available for this feature:

BLAST of Spo07090.1 vs. NCBI nr
BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
BLAST of Spo07090.1 vs. TAIR (Arabidopsis)

BLAST of Spo07090.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|133872\|sp\|P29344.1\|RR1_SPIOL	5.7e-225	100.	RecName: Full=30S ribosomal pr...	[more]
gi\|731323749\|ref\|XP_010672600.1\|	3.5e-206	91.2	PREDICTED: 30S ribosomal prote...	[more]
gi\|225432062\|ref\|XP_002280604.1\|	2.6e-198	87.5	PREDICTED: 30S ribosomal prote...	[more]
gi\|720047604\|ref\|XP_010270863.1\|	1.8e-194	87.0	PREDICTED: 30S ribosomal prote...	[more]
gi\|702447127\|ref\|XP_010024828.1\|	1.5e-193	86.0	PREDICTED: 30S ribosomal prote...	[more]

BLAST of Spo07090.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6V0_SPIOL	3.9e-225	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CTT9_BETVU	2.4e-206	91.2	Uncharacterized protein OS=Bet...	[more]
D7SYG9_VITVI	1.8e-198	87.5	Putative uncharacterized prote...	[more]
A0A059B550_EUCGR	1.0e-193	86.0	Uncharacterized protein OS=Euc...	[more]
M5XQU6_PRUPE	8.3e-191	86.3	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo07090.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RR1_SPIOL	3.5e-227	100.	30S ribosomal protein S1, chlo...	[more]
RPS1_ARATH	1.5e-180	80.2	30S ribosomal protein S1, chlo...	[more]
RS1_SYNP6	1.6e-78	48.6	30S ribosomal protein S1 OS=Sy...	[more]
RS1A_SYNY3	2.8e-75	49.3	30S ribosomal protein S1 homol...	[more]
RS1_SYNE7	1.5e-44	34.7	30S ribosomal protein S1 OS=Sy...	[more]

BLAST of Spo07090.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G30510.1	8.2e-182	80.2	ribosomal protein S1	[more]
AT1G71720.1	3.9e-22	31.2	Nucleic acid-binding proteins ...	[more]
AT3G23700.1	1.1e-21	32.2	Nucleic acid-binding proteins ...	[more]
AT5G14580.1	8.1e-12	37.8	polyribonucleotide nucleotidyl...	[more]
AT4G29060.1	7.6e-10	38.1	elongation factor Ts family pr...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000110	Ribosomal protein S1	PRINTS	PR00681	RIBOSOMALS1	coord: 163..182 score: 8.5E-12coord: 114..128 score: 8.5E-12coord: 96..114 score: 8.5E-12coord: 232..252 score: 8.5E-12coord: 187..203 score: 8.5
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 182..246 score: 6.7E-8coord: 259..329 score: 3.7
IPR003029	S1 domain	PROFILE	PS50126	S1	coord: 184..248 score: 13.677coord: 96..166 score: 12.597coord: 261..329 score: 22
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 173..249 score: 2.3E-9coord: 94..167 score: 1.8E-5coord: 255..331 score: 9.1
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 92..191 score: 5.45E-12coord: 260..339 score: 3.88E-22coord: 179..252 score: 1.4
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 182..248 score: 3.9E-6coord: 259..329 score: 6.6E-26coord: 94..166 score: 3.
None	No IPR available	unknown	Coil	Coil	coord: 346..366 scor
None	No IPR available	PANTHER	PTHR10724	S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1	coord: 40..410 score: 1.8E
None	No IPR available	PANTHER	PTHR10724:SF7	RIBOSOMAL PROTEIN S1-RELATED	coord: 40..410 score: 1.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006412	translation
biological_process	GO:0009156	ribonucleoside monophosphate biosynthetic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0009902	chloroplast relocation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016020	membrane
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004749	ribose phosphate diphosphokinase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17001	0.72	Barchart \| Table
Spo00027	0.71	Barchart \| Table
Spo18398	0.68	Barchart \| Table
Spo13374	0.68	Barchart \| Table
Spo11221	0.68	Barchart \| Table
Spo14483	0.67	Barchart \| Table
Spo03972	0.67	Barchart \| Table
Spo13836	0.67	Barchart \| Table
Spo15793	0.66	Barchart \| Table
Spo15025	0.66	Barchart \| Table
Spo26671	0.65	Barchart \| Table