Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCACGTATCAATGCCTAAATTTTCTTCTCTGCTTCCCCGGTTAGCAATATCTCGAATGTAGCCCAAAATGATAACACCAGTTACACCACTACTAGAAGCCCAAACAATAGAATGTTCACAGTTTATCAACCCTTACTCTCTCCGGGTTTTAGCTACACAACTGCGCAACTTCGGCATTTCCCTTCTTTCCAGTTCTCCGCCTTTCAACCACCATGGTAAGCTACTAAGCTCTCTCTCTCTTTCTCTCTCGTCTTTCTCCGCACTGATTTGTTCTTAATTTCATTCGCGTTATTGGGATTTGATATCTATTAATCTGTTTTCTTTTTCTGCGAATTTATCTGCTGCAATTTTTAACTTCAACTTGCCTTTTTCCTTTTTGATTTTCTTGTTAAGGTTTAGTTTTTGCTCATAGAATTTCTCTGAATTTGCGAATAGTGATATATGATGTCTGTAGAATCATTTGTTCAGAATCGAGCATTGATGTAATTTATCTTAATAATTACATTTTGTATGATTAATTTAGATTTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTATTAGGGGTAGTTCTTCATATGCATCCTCAAGATATGTTGATTTCAAACCCTTAATTTTCAATTAGGTAGGTCAAGCCAGATGTGCTACTTGGTTTCTGTAGTTGGTGGTCTCTTGAATGAAGAGGTGAGTGTATCATGAGGTCTCTTTACATTTTTATGCAGGACTGAAATGGAGTGATGACTAATGAGTAAATACTAATTTATATGGATTATGTATACTATTTGAAAGATTATGAAACCGTTTGTTGGGGATCTTGATTCTTTGATTAGTATACCGTTTTAAAAAGGGGCTTGAATTTGGGACTTACCAGTTTCATGTGTGGAATATTTAGATTATCTTTAGTTATATGATTATGCTTCATGTTAATCAGATGACCTTTTAATTACTTATGTTACATCTGATAGTTAGGAAGGCATTTCCCCTCTCGAAAATATATTTTATCATCCTGTGTATATTTAAAATACTAAGCGTATTTTTTTAGGTGGTAAAATACAAGTTTTAATTTTTAGGTGGTAATAATTTTTCAAATTTTTTAGGCGGTAAAAAACAATTTGACTATAAATTTAATTGAGCTCTTCAAACAATGTCTGAAAATGGATATCCGAACTATTTGGATTGGGATTTGGGAAATAACATTGGACTGGGTCGGATTTCCGGTTTGGCCAGCCCAACGCAAAGCTTAGGTTATTGCCTTGTTGGACACGATATCCCAAAAGGGGTTTGGAAGGATTCTGCGGGTATATGGAAATGACCCAGAAAGAGATTTCTGAAGGGTTTCCGATAATTGGCCATCAAAGTGTTTTCATTGAACTTTCTAGCAAATACTCGAAACTTCACGACGGAAACAAAGAACATCATTTCAAGCTAACTCTGAAGACAAATCCAAAGCTGAATTTCTTTGTCATAAATTCTTCATAAAAATGGTCAGTTTCCCCTCTTCGTTCACCCCTTCTTTTGGTTTTAATTTTGTTCTTGTTTTTGTCACACTTTGAATTGTTCTCAATTTTTTTGAATTATGATTGATAATATTGCAAATGTTTGCTTAATTGTTGTGATATTGCATTAAAAGTTATGAAAATTTCGTGATTTCAGCTTCTGTAGAAGATTTGGGTAAATTTTAATCTTTAGTTGCTTCGTTTAATCGGGTTTTTGTCTAGGATGTTTTTAATTTTATTTGGGGGAGATTAGGGTTTGAGTGATTTATTTGTTTAAAACTACAGAAAATATTAAACTTGTCTATTTTTATTTTCTTGTTTTTGATATATCTGTTAGGGATTAAATCGGTGTTTTCTTTAGAGGATTCAATCGGTGTTAATTTGATCTGTTTTTCGCCAAATGATGAATTTCCCTTCCCATTATGTGTTCAATTCGGATTAATGAGTTGTTTGTCTGCAATTCATGTTTAATTTCATGAGAAAATTATGTGATTGCTACGTTTATTTCAGTATTATGAATAATAAGCTAAATCTATAAACTGGGAATTTCTTGTTGAACTGGTTCAAATTTGAGGTGACTTGTGACTGTCTGCTCAATAGCATCAAACAGAAAAGCACAATCTCCGCCTCACCACTACCATATGGTAGTGAGGGGTGTGCCACAATCGGCTCGGGCATCCTTCTGTAAGGGTGGCTTGGTGGGGGATACAGCCATTAGTGGGTTATGGGCTCAGATTGGCCTTTGAATGTCCCACATACGTTGATACAACTATACCTATAAGTCTATAGCCAATCCCTAAAAATACGTGGGAGAGAAAAAGAGAGAGGGCATGTCTTCTGTAAGGCAATAGAGGTAGTTGGCTTTTCCGAATGCAGCGGCTTTTTTTCCATTTTAATTCGTCTTTGGGAGCAACCCTGTGCTTGTTTTGAGTAGCCGAGTACATTTTGAGGCGATCGGTTCATTGTAAAGAAACCAAAAACTTTGATCTCGAAGTATATATCGCATGAAGTGCTTTTGGATAAAGTTGTTTATTGTTGGTACTTGATCACATATTGTTATCAGTCTATGATTGCGAAACATCTTTGTGTTAAATTTCTTATCTTGTGATGGAAATGATAATTTTTACTTGAAAACCATGTCTACGAAATAGAGTGTTGATTATATTGTTTAAGTGATCCTAAAATATAACAGTTTTCACTGCTAGATGGAAGTAAGGATTGTTTTGATCTATAATCTAGTTATATCAGTTTTCACATGTAATGTTTCCCTTTTTTGTTCTTTAATTATGTTATTAGCATTTTGATTCAAATTTTTACCCTCATATGTGAAGAGTCCAAGGATGCACCAAATTTGCTGTATTTTATGTATGTTTTGAAGTTTGAACAGTTTAAAGATACTTGCTGAGCGTCTATGTGGGTTAGGATTTATTTGCCAGTTTTGGACTAACCGGTTGTGCTCTCTTGGATCTTGATACTTGCATTGTAATGTGGACCTTTCCCGCATTTGATTGTTTGTGATTTGAATTTATCATCCCGGTGAAGAACTCATATTATGACATGTGAATGTTGAAACTTGGAATTAAATATTTAAATTATCATCCAGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTTCAACCCAATATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGTAGTTATGAGTCGTATGATAACTTCTCAATTCTTGTGCATTTGAAGGTTTGCTGGTATGCCAAGAAGTTTCTCTATATCATAATTCTTGACCAAGCAAACGTCCTAATGTCTGTGCACGGCTAATTACCTGGAGAACTAGTATAAGTTAAAAATTAACTACTAAAGAGTAAAGACAAAAAGGTACCTGTAAGCTAGGTTATTATAAAAGTTGTCTTAAAAGGTGAACTAACCTAAAATGAAGGGCACAACCAGAATAATAAATTGATTTGAAGCTAGCTTAATCTAGTAGAGCTTAATTCAAGCTTTTTTATCTCTTGAATCTAGCTATGTCATTGTTTCACTTCATTTTACTGAATTCTACGACATAGTGAATTATATTTCATCAGTTCTCATCATGTTGATCTGGAAGAAATTTTTATCAATGTGTAGAAAATACTACTACTTTCATGTGATTATTTTTCTTGTCCTTGTTAATGTTGGCCTTTTTTTGGTCAAATTCTTGTTTTACTTTAGGCAGGGAACGGTTTCTTATATTTGAACCTACCGAACTTGTGTGCAATCTCAGTCTCGCAGAGACTATGGGTAGCTGAAATTTGCAATGTCCCAAAGATGAATTAAAATTTCTTACTCCGTATTCATTTTATAAGGCTTTTTGTCATGTTTATCTTTTTCATTATTTCTTTATAAGTGTTAATGTTCAACATATTTGTATGAACCTTACAATGGCAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGTAAGCCCAAAGACAGCAGCTCTGCCTTCTAATGTCGCGGAGGAGATATAAAAGATTATTGTCTGTTCCTCTTCACCAAAACCATGGTTAAATGCCTATCCCTTTATGTTTAAAGTGAACTAAGGAACTCAGATGCCCTTCTCTTTAGATAAGGAAAGGTGATTGAGTATACACAGGTTTCAGTTGGCTGCAATTTTAGAACGTCTACACTATTTGATTGGTATAAGACTATAAACACCAAAGCTATTGGATTTAAATGACACTTTTGTCTTGTCATGTTACTGTTATTTTAAGCTACTTGTATTTGGAATATAAGCCTTAGGGAATTTTCAACTTGTACTCCCGAGGTTTCCATGAACGTAGCATGTAAATAAAGCCAACGTTTGACAAGTTTAAAATACAACTAAAATATTTAGAATGCTCTACGTACTTATTTTATTTTATGCTGTTTTAAATTATCAATAAAACTAGATTTTAG GCACGTATCAATGCCTAAATTTTCTTCTCTGCTTCCCCGGTTAGCAATATCTCGAATGTAGCCCAAAATGATAACACCAGTTACACCACTACTAGAAGCCCAAACAATAGAATGTTCACAGTTTATCAACCCTTACTCTCTCCGGGTTTTAGCTACACAACTGCGCAACTTCGGCATTTCCCTTCTTTCCAGTTCTCCGCCTTTCAACCACCATGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTTCAACCCAATATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGTAAGCCCAAAGACAGCAGCTCTGCCTTCTAATGTCGCGGAGGAGATATAAAAGATTATTGTCTGTTCCTCTTCACCAAAACCATGGTTAAATGCCTATCCCTTTATGTTTAAAGTGAACTAAGGAACTCAGATGCCCTTCTCTTTAGATAAGGAAAGGTGATTGAGTATACACAGGTTTCAGTTGGCTGCAATTTTAGAACGTCTACACTATTTGATTGGTATAAGACTATAAACACCAAAGCTATTGGATTTAAATGACACTTTTGTCTTGTCATGTTACTGTTATTTTAAGCTACTTGTATTTGGAATATAAGCCTTAGGGAATTTTCAACTTGTACTCCCGAGGTTTCCATGAACGTAGCATGTAAATAAAGCCAACGTTTGACAAGTTTAAAATACAACTAAAATATTTAGAATGCTCTACGTACTTATTTTATTTTATGCTGTTTTAAATTATCAATAAAACTAGATTTTAG ATGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTTCAACCCAATATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGTAAGCCCAAAGACAGCAGCTCTGCCTTCTAA MATPLFAGITVAAAALAGRYGIQAWQAFKARPPRPKKFFVGGFQPNMTKREAALILGVRESAVAEKVKEAHRRVMIANHPDAGGSHYLASKINEAKDMMVGKPKDSSSAF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03051.1 vs. NCBI nr
Match: gi|902229373|gb|KNA21482.1| (hypothetical protein SOVF_042630, partial [Spinacia oleracea]) HSP 1 Score: 213.0 bits (541), Expect = 2.600e-52 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 1
BLAST of Spo03051.1 vs. NCBI nr
Match: gi|731318349|ref|XP_010669671.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 188.3 bits (477), Expect = 6.900e-45 Identity = 91/110 (82.73%), Postives = 102/110 (92.73%), Query Frame = 1
BLAST of Spo03051.1 vs. NCBI nr
Match: gi|18403957|ref|NP_565824.1| (mitochondrial import inner membrane translocase subunit TIM14-1 [Arabidopsis thaliana]) HSP 1 Score: 183.0 bits (463), Expect = 2.900e-43 Identity = 92/112 (82.14%), Postives = 100/112 (89.29%), Query Frame = 1
BLAST of Spo03051.1 vs. NCBI nr
Match: gi|255577663|ref|XP_002529708.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Ricinus communis]) HSP 1 Score: 182.6 bits (462), Expect = 3.800e-43 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo03051.1 vs. NCBI nr
Match: gi|727447037|ref|XP_010505104.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1-like [Camelina sativa]) HSP 1 Score: 182.2 bits (461), Expect = 5.000e-43 Identity = 91/112 (81.25%), Postives = 99/112 (88.39%), Query Frame = 1
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRM9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_042630 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.800e-52 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 1
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVC2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036500 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 4.800e-45 Identity = 91/110 (82.73%), Postives = 102/110 (92.73%), Query Frame = 1
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Match: B9SUN9_RICCO (Mitochondrial import inner membrane translocase subunit TIM14, putative OS=Ricinus communis GN=RCOM_0713680 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 2.700e-43 Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VXH1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G094000 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.500e-43 Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Match: D7LIK8_ARALL (DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482551 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.700e-43 Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 1
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Match: TI141_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-1 OS=Arabidopsis thaliana GN=TIM14-1 PE=1 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.800e-45 Identity = 92/112 (82.14%), Postives = 100/112 (89.29%), Query Frame = 1
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Match: TI143_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-3 OS=Arabidopsis thaliana GN=TIM14-3 PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 1.900e-42 Identity = 88/112 (78.57%), Postives = 99/112 (88.39%), Query Frame = 1
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Match: TI142_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-2 OS=Arabidopsis thaliana GN=TIM14-2 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 6.700e-40 Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = 1
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Match: TIM14_BOVIN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3) HSP 1 Score: 105.5 bits (262), Expect = 3.700e-22 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 1
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Match: TIM14_PONAB (Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN=DNAJC19 PE=3 SV=3) HSP 1 Score: 104.0 bits (258), Expect = 1.100e-21 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 1
BLAST of Spo03051.1 vs. TAIR (Arabidopsis)
Match: AT2G35795.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 183.0 bits (463), Expect = 1.000e-46 Identity = 92/112 (82.14%), Postives = 100/112 (89.29%), Query Frame = 1
BLAST of Spo03051.1 vs. TAIR (Arabidopsis)
Match: AT5G03030.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 172.9 bits (437), Expect = 1.100e-43 Identity = 88/112 (78.57%), Postives = 99/112 (88.39%), Query Frame = 1
BLAST of Spo03051.1 vs. TAIR (Arabidopsis)
Match: AT3G09700.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 164.5 bits (415), Expect = 3.800e-41 Identity = 84/112 (75.00%), Postives = 93/112 (83.04%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03051.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03051.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03051.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03051.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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