Spo22550 (gene)

Overview
NameSpo22550
Typegene
OrganismSpinacia oleracea (Spinach)
Description24 kDa RNA binding protein
LocationSpoScf_01922 : 67801 .. 83024 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGGTATGATTCTCTCTTCTGTGTTTTTATTAAAATTAGGGTTATGTTTTTCGCTTGTAATTGTTGAATTAATTAGGGTTGATTTTAGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGGTGAGTTTACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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GAAAGATAAATCCCAAATCTTTTGCTGGGTTACTTCATTTTCTGTAATTAGGCATTTACCACCCATGCTTGGCTCAGGTTCTCAGGAATGACAGTAAGGTTCTTGTCTCCGATCTCATTAGATATTTCCGACACATTTCCGGATTCCTCATTTTCTTCAGTTGTTACCTTTGCTGGACTTTTTTTTTTCTGACCATTTTTATCCTCATCCCTCATTTTCTCAACCAATCCTGTTTTCTCTCTTCTTAGTTCGTCCTCGTCTAAGCTAGCAACATTTCCCCTGTACTCATCCTCTTCTGCTACATGTCCTGGTGGTACAAAGGCAGTGTGTTCCATTACTTGTTCAATATTGTACACGTTCTCCCTATCCACTTGAGTTTCTAATACAGTTGCCCTTAGTGAATTGGAAGAATTGGGTATGTTGTATTTTTTTTTGGCGTAATGTATTTCTATCATAGATTTTTACGTAAATCACGTTTATTAAAGCATTATCATTGTCATTTGTGGTTGGTTAAGCTATTATACCACCAATAGTTACTATTTCTGTTTATTGTTTCAATGATGGTTCAATAGTTCGTCTTTTTTCCGAGATGTGGTTGCTGGTTATAATGTTTGATTTAGAGGTGGAGAACTATATAGGGCGAATACGATTAGCTTAGAGCCTTCAAGTGTTGGCGGTGATTTGGAATGAATTGTAAGTTTTGGTGTTCGATATGTTATACTTCATTTTGCATGCAATAGCATGGAAGTTGTAGTAGTCAAGTTTTAAATAGGATGTAGGATGTAGGATGGAGAGCTTAACGTTATGAATCAGTCAGTACTTTCAAGGTGAGTTTCAAGAAGGCTTTTACCTGTTGTGGGTTATTTACTCCAATTGGGCCCTAGATAATTTGTGTGTGTTGGTCTTCTCTTTGGTGTAAAGTATTCCAAACATCTATTTGTTTGGTCAAGGAGGAAACAGTAGTTCAATTGTTGTGTACACAGAGTTACATTAGTTGATTTTAACCATAGAAACAAGCTGACCTACCATGTTTCTTATGCTTTTAGGTTCATTTTTGTCTTAGAAGTCTTACAAACATTTTACTTTGTCATTTAACCGTGTTAATCATCTTGTGTAACAGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGTTCGAAAAGAAAGAAAGGCATCTTCCATCCAAATCAGGTTACGAAAAAGGATACTTATCTTCTGAATTAGGGCATGTTAATGTTTCTTTTAAGTATCTGGAGTTCATCCTCTTTTCAAGACACTCCATTGCCTATGAGGCGAGAAGTGTGATGTTAGGATAAATATACCTAAATTGAAATGTGGAGAAGCCGATAATTTTGAGTGCAATAATTTTCTAATATTTAAGTAGTTTTAGATGAAAATTTGAAAATAAGTTTTTTGATTTACAAGTCATATATATATATTAGCTACGGAAATTGAAAGCAAGTAGTGGAAAGTTAAGGATTTTACGGATTATACAAAGTTGACAATTTCAAGTGCTAAAGAAGTTCATTTTGAGAGTAAATACAATTCTATTCCGTCTGAATATAGTATAGATATAATTTGGTGTAGTGTGAACAATATTTTCAATGAGAAATTTTATGAAATGGTTGATGCAGAAAATTATTTCAAAAGATTATGTATATTTTTTTGCCAAAGCATTAGATTTGATATACTATTGAAATTCATGGTCAAAATATTGACCAAAGAAAAAGGAGGATATACTATTGAATTGGGTATGCATTTTCTGATCATCTTTTCTCTTGGTCAATAGTATATCTCCTTTTTTTTTTGGTCAATATTTTGACCAAGAACTTCAATAGTATATCAAATCTAATGCTCTCGCAAAAAAATACACATAATATTTTGAAATGATCTTCTGTATAACCATTTCATTAAATTTTCCATTGAAAATATTGCTCACACTATCCCAAATTATGTCTATACTATATGCAGACGTAATAGAATTGTATTTGTTCTCAAAATGAACTTCTTTAACACTTGGAAATGTCAACTTGTATGGTCCGTAAAATCCTTAACTTTTCATCACTTGCCTTCAACTCTAACATATATATATATATATTTGACTTGTAAATCAAAAAGCTTATTTTCAAATTTTCATCTAAAACTACTGTGAATATTAGAAAATCATTGCCCTCATAATCATCGGCTTCTCCACATTTCAATTTAGGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGGTAATTTCTGTCACATTATTTCAATTTCATAATTCTAGGGTTCTATTGTTGAGAAAGAAGGCGAATCTCTGAAATTGGTAATTTCTGTCACATTATTTCAATATCATAATTCTAGGGTTTCCATCTTCCTCCTATTCATGAAATGAACAACCGCTTTTGAATTGCTAAATGTAATCCAATTCTCTCGGGAGTTTCGTTTATATACTACTTTTGGGGAGTTTTATTTGTTTCTGGGTTTTGTTCTTTTGGTTTTTGCTTCGTGATTGTGTTTAATTGAGGAGTTAATGAAGTCGGCCCCATTATGTGTTTTCTTTAATTGTCTTTGTGTTAATTTTTTATGTTTTTTTTTTCAATGGTTAGCTTTTGAATTACGTTTTGTCTGTAATTGCTTCATGATGCTGAAATTTGTGAGTCCCGAAGTGTTGAGATATCTTTGAAAAATTAGAATTGATTTTTTAGATTACTTGTAGTTTCTATCTGAAATAGATGATTTTTATTCATTCCTGCCTCCACAATTATTTCTTTTTTTATGTATATTATTTGCGTCACTCTTAATTTGTAGGTGGACCTTAATCCATTCCGTTTCACCATGGCTTTCAAAATTACAAATCAAATGTGGGATTCGGTTTATAACAAACTCATTGTTTCTGAAAACGGGAAAGAGATTGAGAGACTATTTGCTGAATATGGCAGAGTTTGTTTAGAAGTCACAATAGAGAAGAGTAATTTTATTGCTCAGTTTTACTTGTTGTTATATCCCCAATCCAGTTTCAAAATCCTAAGGTTTCCACCTTCACCCAACTTCCCTAATTTCACTGAGTTTTGCAAATTATTTTCACTCACTGTGTATTTAGGCATCATATACATTTATAGTCATATAAATAGATGTTCATTTCTATTTCTGCAATTATTTCATTTTCCGTATGATTGTTTCAGCTCTGTGTGTTAGGGTGTGTAGTAATGACGGACAGATTTTAAATAGATGTTCATTTCTATTTCTGCAATTATTTCATTTTCCGTATGATTGTTTCAGCTCTGTGTGTTAGGGTGTGTAGTAATGAAGGACGGATTTTAAAATTTACTGTCTTTTTGAAAAATAATTTCTTGAGAAGATAAAGACTTTCCAAATCACAAATCTTTTGTCGGACTACTTTTATTTTGTGTAATGAGACATCGTTTATGCGAAGTATATACAAATGGATAGTAGTATTAATAGAGTAGTTTCTTGCTGTTAATTCAATCCTAATTGATTTTTTTAAGTTGACAAGGTGAGGTTGACAGCCATCGTGTGCTTATTAGATCTGAACCAGTTATTGAGGTACTATCTATTACTTTGCATAACCAAAACCTAAACGATTCCGCTTCGGATGACAGCAGCAAAGAAGCGTTGGAGCTCTATGGTACTGTTTATCTCCATGATAGTATGGCCCGTACGGGTGAAGGCTGCAACCGTATTGTTTTTTTCCAATGAGAGGAGGAATTTGATGACCCAGAGATCATCCCTTTTGTTGGTGGTGCCTTAACAACATCATCATCACTTCGAACAATTTCACAAACTTACTGTTCCCGGTATTGCCTTTAATGCTGAGGTAGAGTATCTTGCTCTAACATTTGGTGTTCATGCCAATGTCAACGTCCAACTCTTTAAGCAACAAGAGCAAGAAGAAGATGAAGATGAAGACGGAGACAAAGATATTAATATTTATGGCACAATATCTGCTGCGTATAATCCTAACACTTATAAAAGCAAGAAGTTGATATTACTATTCCCATAATAGTGAGGTTACGAAATTGCCCCCAGTTTTCTTCCTTCTTTTTTTGTCTTTTACCTTACTGACAGTATATTTACGTAATTACTGTCTCTTATTAGAGGCTGCCGCGTGTCCCTTTCACCTACAACCAAGCTCTCCTCCCTCATCCTCCTTACCCTGCTGCTTTGGGGCCGTTTTTCCCTCTCTAGCTTCCCTGTCCTCCTACCCTGCCACTTACTCTCCCCTCTGCCAGGGCTTACTCAAAGTGAGAATGATGAGTTTCTTTTCATCTCCATCAGTGTTTAAGAATCGTATTTAGGATATATGCAGAGGTTCATCATTGTCGACCTCAACATTAAGACTACGCAAACATCTGTCATCTCTTCAATAATTTGGTTATCTCCGCCTCTACCTCTTCTCTCTACGCTCAATTGTAGATTAATCTAGGATTTTCTTCGTTTAAATGCCGACTCATTTGGTGTATCATTTGCTTAAAATTTGATTAATTTAGGGTTTTCACTTCTCCCAAATTCATTTAGTCTATGTATATATTGCTTGAAATTTGATTAGTTTGGGTTAATGTTATGTTTCATTGATCAATTTTGGTTGGGATTGTGTGTGTTGATGCAGAAGGCTGACATTATTTCGTCCCATGAGTCTACCGACCATGTCGTGTTTTTGTTCTTTCAGTTGCTAAACCGGATATTATTGTTATATTCGCTTAAAATTCGAATAATTTAGATTTTTCTCCTCTCCCAAATTCATATAGTTTATGTATATGTTGCTTTAAGGTTGATTCATTTGGGTTAATGTTATTGTTCATTGATCAATTTTAGTTGGGGTTGTGTATGTTGATATCGTGTTTTTGTTCTTTCAGTTGCTAAACCGAGTATTATTGCTATATATATTTGCTTAAAGTTCGATTAATTCAGGGTTTTATTCTCTCCCAAATCCCAATTCTTTGATACACTATTTGATGAAATTATTTTTGGAATTCGAATTGGTTTGATTTGTGAATTGTTGATTTTATTGTATGTGTCTTGATAATGAGCAGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

mRNA sequence

ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGCACGCCGGCGGTACACAAGCAGAGAGTCAATACACCCATCTGAATTTGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

Coding sequence (CDS)

ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGCACGCCGGCGGTACACAAGCAGAGAGTCAATACACCCATCTGAATTTGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

Protein sequence

MEDGIRNFRVLKLLTLTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVEHAGGTQAESQYTHLNLVMGLGKGNEGETSRSICVITSTSRQYLKETLTCPKFIMSKTLQNKRSPKLFQFHNSRVLRSRKKANHLNLFKRRSMYITLI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22550.1Spo22550.1mRNA


Homology
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|902181167|gb|KNA09687.1| (hypothetical protein SOVF_151300 [Spinacia oleracea])

HSP 1 Score: 72.8 bits (177), Expect = 6.400e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29  DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 80  DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 121
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|1015370|gb|AAA79045.1| (24 kDa RNA binding protein, partial [Spinacia oleracea])

HSP 1 Score: 72.8 bits (177), Expect = 6.400e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 27 DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 68
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|731345735|ref|XP_010684074.1| (PREDICTED: ribonucleoprotein At2g37220, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 64.3 bits (155), Expect = 2.300e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           QQP+F PDLK+ V NLPFNVDS++  GLFG+AGTVEMVE
Sbjct: 82  QQPNFSPDLKLFVGNLPFNVDSSDLAGLFGSAGTVEMVE 120
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|527188721|gb|EPS60671.1| (hypothetical protein M569_14131, partial [Genlisea aurea])

HSP 1 Score: 60.1 bits (144), Expect = 4.300e-6
Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D G +P F PDLK+ V NLPFNVDSA   GLF  AG VEMVE
Sbjct: 24 DQGDEPRFSPDLKLYVGNLPFNVDSATLAGLFEQAGNVEMVE 65
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQY7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151300 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.500e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29  DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 80  DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 121
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: Q41367_SPIOL (24 kDa RNA binding protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.500e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 27 DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 68
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161820 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.600e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           QQP+F PDLK+ V NLPFNVDS++  GLFG+AGTVEMVE
Sbjct: 82  QQPNFSPDLKLFVGNLPFNVDSSDLAGLFGSAGTVEMVE 120
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: S8C8F4_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_14131 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.000e-6
Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D G +P F PDLK+ V NLPFNVDSA   GLF  AG VEMVE
Sbjct: 24 DQGDEPRFSPDLKLYVGNLPFNVDSATLAGLFEQAGNVEMVE 65
[Close]
BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-7
Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 1 

		  

Query: 16  LTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           + LS F  L   ++  +QP F  DLK+ V NLPF+VDSA   GLF  AG VEMVE
Sbjct: 63  VALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 117
[Close]
BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.900e-7
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 1 

		  

Query: 16  LTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           + LS F  L   ++  +QP F  DLK+ V NLPF+VDSA   GLF  AG VE+VE
Sbjct: 64  VALSDFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVE 118
[Close]
BLAST of Spo22550.1 vs. TAIR (Arabidopsis)
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.800e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           ++  F  DLK+ V NLPFNVDSA+   LF +AG VEMVE
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVE 121
The following BLAST results are available for this feature:
BLAST of Spo22550.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 4
Match NameE-valueIdentityDescription
gi|902181167|gb|KNA09687.1|6.4e-1080.9hypothetical protein SOVF_1513... [more]
gi|1015370|gb|AAA79045.1|6.4e-1080.924 kDa RNA binding protein, pa... [more]
gi|731345735|ref|XP_010684074.1|2.3e-774.3PREDICTED: ribonucleoprotein A... [more]
gi|527188721|gb|EPS60671.1|4.3e-666.6hypothetical protein M569_1413... [more]
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BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
A0A0K9QQY7_SPIOL4.5e-1080.9Uncharacterized protein OS=Spi... [more]
Q41367_SPIOL4.5e-1080.924 kDa RNA binding protein (Fr... [more]
A0A0J8BYC6_BETVU1.6e-774.3Uncharacterized protein OS=Bet... [more]
S8C8F4_9LAMI3.0e-666.6Uncharacterized protein (Fragm... [more]
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BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ROC2_NICSY1.3e-752.729 kDa ribonucleoprotein B, ch... [more]
ROC2_NICPL3.9e-750.931 kDa ribonucleoprotein, chlo... [more]
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BLAST of Spo22550.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G37220.17.8e-658.9RNA-binding (RRM/RBD/RNP motif... [more]
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010167 response to nitrate
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0007584 response to nutrient
biological_process GO:0009723 response to ethylene
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006970 response to osmotic stress
biological_process GO:0006281 DNA repair
biological_process GO:0010107 potassium ion import
biological_process GO:0080178 5-carbamoylmethyl uridine residue modification
biological_process GO:0048366 leaf development
biological_process GO:0009987 cellular process
biological_process GO:0009933 meristem structural organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0048316 seed development
biological_process GO:0080110 sporopollenin biosynthetic process
biological_process GO:0006400 tRNA modification
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010118 stomatal movement
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0015706 nitrate transport
biological_process GO:0009651 response to salt stress
biological_process GO:0009269 response to desiccation
biological_process GO:0009409 response to cold
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006826 iron ion transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0009738 abscisic acid-activated signaling pathway
cellular_component GO:0005829 cytosol
cellular_component GO:0009536 plastid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0044464 cell part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005267 potassium channel activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0016879 ligase activity, forming carbon-nitrogen bonds
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0045552 dihydrokaempferol 4-reductase activity
molecular_function GO:0017076 purine nucleotide binding
molecular_function GO:0004519 endonuclease activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo142400.75Barchart | Table
Spo238560.73Barchart | Table
Spo092140.73Barchart | Table
Spo166800.72Barchart | Table
Spo214220.72Barchart | Table
Spo027490.71Barchart | Table
Spo172200.71Barchart | Table
Spo031630.70Barchart | Table
Spo185420.70Barchart | Table
Spo103290.70Barchart | Table
Spo020650.70Barchart | Table
Spo090080.69Barchart | Table
Spo024780.69Barchart | Table
Spo049850.69Barchart | Table
Spo070790.69Barchart | Table
Spo145890.68Barchart | Table
Spo269950.68Barchart | Table
Spo049990.68Barchart | Table
Spo052690.68Barchart | Table
Spo054440.68Barchart | Table
Spo028850.68Barchart | Table
Spo109650.68Barchart | Table
Spo018220.68Barchart | Table
Spo048730.68Barchart | Table
Spo111600.67Barchart | Table
Spo152970.67Barchart | Table
Spo046390.67Barchart | Table
Spo181160.67Barchart | Table
Spo085410.67Barchart | Table
Spo158420.67Barchart | Table
Spo161610.66Barchart | Table
Spo022300.66Barchart | Table
Spo036650.66Barchart | Table
Spo056270.66Barchart | Table
Spo114820.66Barchart | Table
Spo149420.66Barchart | Table
Spo189970.66Barchart | Table
Spo199360.66Barchart | Table
Spo200450.66Barchart | Table
Spo237710.66Barchart | Table
Spo250130.66Barchart | Table
Spo265660.66Barchart | Table
Spo269900.66Barchart | Table
Spo048850.65Barchart | Table
Spo038650.65Barchart | Table
Spo013440.65Barchart | Table
Spo018410.65Barchart | Table
Spo270040.65Barchart | Table
Spo206390.65Barchart | Table
Spo023400.65Barchart | Table
Spo216000.65Barchart | Table
Spo218230.65Barchart | Table
Spo234020.65Barchart | Table
Spo112850.65Barchart | Table
Spo001730.65Barchart | Table
Spo162180.65Barchart | Table
Spo091620.65Barchart | Table
Spo065740.65Barchart | Table
Spo172250.65Barchart | Table
Spo176770.65Barchart | Table