Spo02897 (gene) | SpinachBase

Overview


Name	Spo02897
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ras-related protein Rab-2-A
Location	SpoScf_02035 : 63688 .. 65444 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGCCATACGATTACCTTTTCAAATACATCGTAATCGGAGATACAGGAGTCGGGAAATCATGTCTCAATCTACAGTTCACAGACAAGAGGTTTAAACCCGTACATGCGATTACAATCGGTGCCGAATTCGGGTCCAGAACGATTACAATTGATAATAACAAAAACAAAAAGGTAATAAAGTTACAAATATGGGATACGGGTGGTCAAGAAGCGTATAGATCAATCACAAGATCGTACTACCGGGGTGCTGCAGCTGCACTTCTGGTTTACGACATTACAAGAAGAGAGACGTTTAATCATCTCGAAACTTGGCTAAATGATGCACGACAACACGCTCTTAGCGAGAATATGACAGTTGTGCTTGTAGGGAATAAGTGTGATGTTCCTTGTCGTATGAGGGAAGTAAGCGTCGAAGAAGGGAAAGTGTTTGCCAAGGATCATGGGTTGATGGGATTTGTCGAGTGTTCTGCTAAAACTGGTGAAAATGTTGACGAGGTTTTTGTTAAAACTGCTGCTGTTATCTATAACAAGATTCAGGATGGTGTTTTTAATTTATTGAATGACTTTAATTGTGGGATTAAGGTTGGATATGGGGATGTTAAAGGAGATAATTATGTCACAACTTTTCAAACCGGAGCTTGTTGTGGTGGTTCAAATAGGTCTGATTTTAAATTTAAAGATTAGATTTGTTTATAGACTTTTGGCTTCTTGGTTTATTGAATTAGATTTATTTTAGTGTACGTATGTTTGAATTTATCAAATTAGAATAAGACTCCGTTTTATTCGACTTATTTTATTTGAAATTAACTTATTTATGTGTGAAACTGTATGAAAAAAATTTATTTTTTCTGAACTTGTATGAATTTATTTTGTCTAAATAAGATGAACATAACAGAGCCTAATTAAACCAAACTTGATCTAGCATCGTATACAATCTTATCTAACATATATTATAACTAGTCCTTAATTGTATAACAAAAAAGAAACGAAGGGAGTATAAAAAGATTTGGATACTGTTGTTGTTGCGGCGTGGTGATTGTTTGTGAGTTTATTAATTATCGGGTGATATTAATTTTTCGATGATTATTTATATATTTTAGTAAAACAACAATTTATATGCGTAGTACGGAGTAGCTAATTAACCAAAACAAATGTGGTGTGAAACAAGTTTAGTACATACATTAGTACAACAATGAGGGCCGATAAAGTAGCCTAGCCTATTTGAAATTTTGAACTACTTTCATCAACGAAGGTAACTTAAAAAGCCAATTCCCCCTCTTTGATCAAAGGCACGGACTTAATAAATTGACCTAGGGCGACCAAAAAATATTACCCTCTCTATTAAAGAGGGCGATTGTCTTGGTCGCCTCGTTGATTCGATTTGTTGTGAATGCATAAAACTTGGCGTTTAATTTAGTAACAATCATCATGGTGATGAGGATGGTGGTAGCCACCATGATGGTCATAGTGGTGGTAACCATCGTGATAGCGATGGTAATGATGATGATCACAAACGTAGTCATGGTCGTAACAATGATGGTGGTGTTGATGATGATGATGACCATGATCATGATCATGTCCTCCATGCCATCCATGATGATGATGATCGTCATAGTAGTAAGGGACACCATAACCCGATGGTTCATATTGCCATGGTGATGAATAATTGTGATTCCCGTAGTCCCACCCCCAACTCATATTTCATTAGCTGTTGCACACGGTTGTACGACTTGCACCCAACTACGTTCTGA

mRNA sequence

ATGTCATCGCCATACGATTACCTTTTCAAATACATCGTAATCGGAGATACAGGAGTCGGGAAATCATGTCTCAATCTACAGTTCACAGACAAGAGGTTTAAACCCGTACATGCGATTACAATCGGTGCCGAATTCGGGTCCAGAACGATTACAATTGATAATAACAAAAACAAAAAGGTAATAAAGTTACAAATATGGGATACGGGTGGTCAAGAAGCGTATAGATCAATCACAAGATCGTACTACCGGGGTGCTGCAGCTGCACTTCTGGTTTACGACATTACAAGAAGAGAGACGTTTAATCATCTCGAAACTTGGCTAAATGATGCACGACAACACGCTCTTAGCGAGAATATGACAGTTGTGCTTGTAGGGAATAAGTGTGATGTTCCTTGTCGTATGAGGGAAGTAAGCGTCGAAGAAGGGAAAGTGTTTGCCAAGGATCATGGGTTGATGGGATTTGTCGAGTGTTCTGCTAAAACTGGTGAAAATGTTGACGAGGTTTTTGTTAAAACTGCTGCTGTTATCTATAACAAGATTCAGGATGGTGTTTTTAATTTATTGAATGACTTTAATTGTGGGATTAAGGTTGGATATGGGGATGTTAAAGGAGATAATTATGTCACAACTTTTCAAACCGGAGCTTGTTGTGGTGGTTCAAATAGTAACAATCATCATGGTGATGAGGATGGTGGTAGCCACCATGATGGTCATAGTGGTGGTAACCATCGTGATAGCGATGGTAATGATGATGATCACAAACGTAGTCATGGTCGTAACAATGATGGTGGTGTTGATGATGATGATGACCATGATCATGATCATGTCCTCCATGCCATCCATGATGATGATGATCGTCATAGTAGTAAGGGACACCATAACCCGATGGTTCATATTGCCATGGTGATGAATAATTGTGATTCCCGTAGTCCCACCCCCAACTCATATTTCATTAGCTGTTGCACACGGTTGTACGACTTGCACCCAACTACGTTCTGA

Coding sequence (CDS)

ATGTCATCGCCATACGATTACCTTTTCAAATACATCGTAATCGGAGATACAGGAGTCGGGAAATCATGTCTCAATCTACAGTTCACAGACAAGAGGTTTAAACCCGTACATGCGATTACAATCGGTGCCGAATTCGGGTCCAGAACGATTACAATTGATAATAACAAAAACAAAAAGGTAATAAAGTTACAAATATGGGATACGGGTGGTCAAGAAGCGTATAGATCAATCACAAGATCGTACTACCGGGGTGCTGCAGCTGCACTTCTGGTTTACGACATTACAAGAAGAGAGACGTTTAATCATCTCGAAACTTGGCTAAATGATGCACGACAACACGCTCTTAGCGAGAATATGACAGTTGTGCTTGTAGGGAATAAGTGTGATGTTCCTTGTCGTATGAGGGAAGTAAGCGTCGAAGAAGGGAAAGTGTTTGCCAAGGATCATGGGTTGATGGGATTTGTCGAGTGTTCTGCTAAAACTGGTGAAAATGTTGACGAGGTTTTTGTTAAAACTGCTGCTGTTATCTATAACAAGATTCAGGATGGTGTTTTTAATTTATTGAATGACTTTAATTGTGGGATTAAGGTTGGATATGGGGATGTTAAAGGAGATAATTATGTCACAACTTTTCAAACCGGAGCTTGTTGTGGTGGTTCAAATAGTAACAATCATCATGGTGATGAGGATGGTGGTAGCCACCATGATGGTCATAGTGGTGGTAACCATCGTGATAGCGATGGTAATGATGATGATCACAAACGTAGTCATGGTCGTAACAATGATGGTGGTGTTGATGATGATGATGACCATGATCATGATCATGTCCTCCATGCCATCCATGATGATGATGATCGTCATAGTAGTAAGGGACACCATAACCCGATGGTTCATATTGCCATGGTGATGAATAATTGTGATTCCCGTAGTCCCACCCCCAACTCATATTTCATTAGCTGTTGCACACGGTTGTACGACTTGCACCCAACTACGTTCTGA

Protein sequence

MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSNSNNHHGDEDGGSHHDGHSGGNHRDSDGNDDDHKRSHGRNNDGGVDDDDDHDHDHVLHAIHDDDDRHSSKGHHNPMVHIAMVMNNCDSRSPTPNSYFISCCTRLYDLHPTTF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02897.1	Spo02897.1	mRNA

Homology

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BLAST of Spo02897.1 vs. NCBI nr
Match: gi|902178447|gb|KNA09147.1| (hypothetical protein SOVF_156230 [Spinacia oleracea])

HSP 1 Score: 459.5 bits (1181), Expect = 4.900e-126
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 1


		  
Query: 1   MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV 60
           MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV
Sbjct: 1   MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV 60

Query: 61  IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT 120
           IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT
Sbjct: 61  IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT 120

Query: 121 VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI 180
           VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI
Sbjct: 121 VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI 180

Query: 181 QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSNSNN 225
           QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSN ++
Sbjct: 181 QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSNRSD 224

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BLAST of Spo02897.1 vs. NCBI nr
Match: gi|902219139|gb|KNA18236.1| (hypothetical protein SOVF_072390 [Spinacia oleracea])

HSP 1 Score: 299.3 bits (765), Expect = 8.400e-78
Identity = 151/217 (69.59%), Postives = 179/217 (82.49%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+ECSAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMECSAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVKGD---NYVTTFQTGACCG 219
           F++ N+ + GIKVGYG ++G+      +T Q+GACCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIQGNATGRDASTSQSGACCG 211

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BLAST of Spo02897.1 vs. NCBI nr
Match: gi|731345078|ref|XP_010683735.1| (PREDICTED: ras-related protein RABB1c [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 298.9 bits (764), Expect = 1.100e-77
Identity = 151/217 (69.59%), Postives = 177/217 (81.57%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+ECSAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMECSAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVKGD---NYVTTFQTGACCG 219
           F++ N+ + GIKVGYG ++G+      TT Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIQGNAAGRDATTSQNGVCCG 211

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BLAST of Spo02897.1 vs. NCBI nr
Match: gi|567221272|ref|XP_006414265.1| (hypothetical protein EUTSA_v10025789mg [Eutrema salsugineum])

HSP 1 Score: 290.8 bits (743), Expect = 3.000e-75
Identity = 149/220 (67.73%), Postives = 175/220 (79.55%), Query Frame = 1


		  
Query: 2   SSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVI 61
           S  Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K I
Sbjct: 99  SMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPI 158

Query: 62  KLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTV 121
           KLQIWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT+
Sbjct: 159 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTI 218

Query: 122 VLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQ 181
           +L+GNKCD+  R R VS EEG+ FA++HGL+ F+E SAKT +NV+E F+KTAA IY KIQ
Sbjct: 219 MLIGNKCDLAHR-RAVSTEEGEQFAREHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQ 278

Query: 182 DGVFNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           DGVF++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 279 DGVFDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 310

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BLAST of Spo02897.1 vs. NCBI nr
Match: gi|15235981|ref|NP_193450.1| (RAB GTPase homolog B1C [Arabidopsis thaliana])

HSP 1 Score: 290.8 bits (743), Expect = 3.000e-75
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           F++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPI8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_156230 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 3.400e-126
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 1


		  
Query: 1   MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV 60
           MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV
Sbjct: 1   MSSPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKV 60

Query: 61  IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT 120
           IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT
Sbjct: 61  IKLQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMT 120

Query: 121 VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI 180
           VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI
Sbjct: 121 VVLVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKI 180

Query: 181 QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSNSNN 225
           QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSN ++
Sbjct: 181 QDGVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCGGSNRSD 224

[Close]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFG8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072390 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.900e-78
Identity = 151/217 (69.59%), Postives = 179/217 (82.49%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+ECSAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMECSAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVKGD---NYVTTFQTGACCG 219
           F++ N+ + GIKVGYG ++G+      +T Q+GACCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIQGNATGRDASTSQSGACCG 211

[Close]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C401_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g159510 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.700e-78
Identity = 151/217 (69.59%), Postives = 177/217 (81.57%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+ECSAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMECSAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVKGD---NYVTTFQTGACCG 219
           F++ N+ + GIKVGYG ++G+      TT Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIQGNAAGRDATTSQNGVCCG 211

[Close]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Match: A0A087GQP7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G210200 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.100e-75
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           F++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Match: D7MC22_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493160 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.100e-75
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           F++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Match: RAB1C_ARATH (Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.900e-77
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           F++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 8.700e-75
Identity = 147/215 (68.37%), Postives = 170/215 (79.07%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++LV
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLV 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E FVKTA  IY KIQDGV
Sbjct: 123 GNKCDLSHR-RAVSYEEGEQFAKEHGLI-FMEASAKTAQNVEEAFVKTAGAIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYG--DVKGDNYVTTFQTGACC 218
           F++ N+ + GIKVGY      G    ++ Q G CC
Sbjct: 183 FDVSNE-SYGIKVGYAIPGQSGGAGSSSSQGGGCC 209

[Close]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 9.600e-74
Identity = 147/216 (68.06%), Postives = 170/216 (78.70%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R I IDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++LV
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLV 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E FVKTA  IY KIQDGV
Sbjct: 123 GNKCDLSHR-RAVSYEEGEQFAKEHGLI-FMEASAKTAQNVEEAFVKTAGAIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGY---GDVKGDNYVTTFQTGACC 218
           F++ N+ + GIKVGY   G   G    ++ Q G CC
Sbjct: 183 FDVSNE-SYGIKVGYVVPGQSGGAG--SSSQGGGCC 208

[Close]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Match: RAB1B_ARATH (Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.800e-73
Identity = 139/217 (64.06%), Postives = 170/217 (78.34%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           YDYLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R +T+D     + IKLQ
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDG----RPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NM+++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NPNMSIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+    R VS EEG+ FAK+HGL+ F+E SA+T +NV+E F++TAA I   IQDGV
Sbjct: 123 GNKCDL-AHKRAVSKEEGQQFAKEHGLL-FLEASARTAQNVEEAFIETAAKILQNIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVK---GDNYVTTFQTGACCG 219
           F++ N+ + GIK+GYG  +   G    T  Q G CCG
Sbjct: 183 FDVSNE-SSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.800e-71
Identity = 136/196 (69.39%), Postives = 160/196 (81.63%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R I ID     K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDG----KQIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NPNMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R V+ EEG+ FAK+HGL+ F+E SA+T  NV+E F+ TA  IY KIQDGV
Sbjct: 123 GNKCDLTHR-RAVTTEEGEQFAKEHGLI-FLETSARTAHNVEEAFINTAKEIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYG 201
           F++ N+ + GIKVGYG
Sbjct: 183 FDVSNE-SYGIKVGYG 190

[Close]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Match: AT4G17170.1 (RAB GTPase homolog B1C)

HSP 1 Score: 290.8 bits (743), Expect = 1.100e-78
Identity = 149/217 (68.66%), Postives = 174/217 (80.18%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y YLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R ITIDN    K IKLQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NMT++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NANMTIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  R R VS EEG+ FAK+HGL+ F+E SAKT +NV+E F+KTAA IY KIQDGV
Sbjct: 123 GNKCDLAHR-RAVSTEEGEQFAKEHGLI-FMEASAKTAQNVEEAFIKTAATIYKKIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDV---KGDNYVTTFQTGACCG 219
           F++ N+ + GIKVGYG +    G    +T Q G CCG
Sbjct: 183 FDVSNE-SYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Match: AT4G35860.1 (GTP-binding 2)

HSP 1 Score: 276.2 bits (705), Expect = 2.700e-74
Identity = 139/217 (64.06%), Postives = 170/217 (78.34%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           YDYLFKYI+IGDTGVGKSCL LQFTDKRF+PVH +TIG EFG+R +T+D     + IKLQ
Sbjct: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDG----RPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RSITRSYYRGAA ALLVYDITRRETFNHL +WL DARQHA + NM+++L+
Sbjct: 63  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHA-NPNMSIMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+    R VS EEG+ FAK+HGL+ F+E SA+T +NV+E F++TAA I   IQDGV
Sbjct: 123 GNKCDL-AHKRAVSKEEGQQFAKEHGLL-FLEASARTAQNVEEAFIETAAKILQNIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVK---GDNYVTTFQTGACCG 219
           F++ N+ + GIK+GYG  +   G    T  Q G CCG
Sbjct: 183 FDVSNE-SSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Match: AT4G17160.1 (RAB GTPase homolog B1A)

HSP 1 Score: 256.5 bits (654), Expect = 2.200e-68
Identity = 132/214 (61.68%), Postives = 161/214 (75.23%), Query Frame = 1


		  
Query: 5   YDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIKLQ 64
           Y Y FKYI+IGDTGVGKSCL L+FTDKRF+ VH +TIG EFG++TITIDN    K IKLQ
Sbjct: 3   YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDN----KPIKLQ 62

Query: 65  IWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVVLV 124
           IWDT GQE++RS+TRSYYRG A  LLVYDITRRETFNHL +WL +ARQHA SENMT +L+
Sbjct: 63  IWDTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHA-SENMTTMLI 122

Query: 125 GNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQDGV 184
           GNKCD+  + R VS EEG+ FA++HGL+ F+E SAKT  NV+E FV+TAA IY +IQDGV
Sbjct: 123 GNKCDLEDK-RTVSTEEGEQFAREHGLI-FMEASAKTAHNVEEAFVETAATIYKRIQDGV 182

Query: 185 FNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACCG 219
            +  N+      +  G   G +  ++ Q   CCG
Sbjct: 183 VDEANEPG----ITPGPFGGKDASSSQQRRGCCG 205

[Close]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Match: AT3G09900.1 (RAB GTPase homolog E1E)

HSP 1 Score: 171.4 bits (433), Expect = 9.300e-43
Identity = 90/215 (41.86%), Postives = 129/215 (60.00%), Query Frame = 1


		  
Query: 3   SPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIK 62
           S YDYL K ++IGD+GVGKSCL L+F+D  F      TIG +F  RT+ +D  +    IK
Sbjct: 10  SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKR----IK 69

Query: 63  LQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVV 122
           LQIWDT GQE +R+IT +YYRGA   LLVYD+T   +FN++  W+ +  QHA S+++  +
Sbjct: 70  LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHA-SDSVNKI 129

Query: 123 LVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQD 182
           LVGNK D+    R V   +G+  A ++G+  F E SAKT +NV++VF+  A  I  ++ +
Sbjct: 130 LVGNKADMDESKRAVPTSKGQALADEYGIK-FFETSAKTNQNVEQVFLSIAKDIKQRLTE 189

Query: 183 GVFNLLNDFNCGIKVGYGDVKGDNYVTTFQTGACC 218
                      GIK+   D    +  +T +  ACC
Sbjct: 190 SDTKAEPQ---GIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Match: AT5G03520.1 (RAB GTPase homolog 8C)

HSP 1 Score: 167.2 bits (422), Expect = 1.800e-41
Identity = 92/218 (42.20%), Postives = 128/218 (58.72%), Query Frame = 1


		  
Query: 3   SPYDYLFKYIVIGDTGVGKSCLNLQFTDKRFKPVHAITIGAEFGSRTITIDNNKNKKVIK 62
           S YDYL K ++IGD+GVGKSCL L+F+D  F      TIG +F  RT+ +D  +    IK
Sbjct: 10  SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKR----IK 69

Query: 63  LQIWDTGGQEAYRSITRSYYRGAAAALLVYDITRRETFNHLETWLNDARQHALSENMTVV 122
           LQIWDT GQE +R+IT +YYRGA   LLVYD+T   +FN++  W+ +  QHA S+N+  +
Sbjct: 70  LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHA-SDNVNKI 129

Query: 123 LVGNKCDVPCRMREVSVEEGKVFAKDHGLMGFVECSAKTGENVDEVFVKTAAVIYNKIQD 182
           LVGNK D+    R V   +G+  A ++G+  F E SAKT  NV+ VF+  A  I  ++ +
Sbjct: 130 LVGNKADMDESKRAVPTAKGQALADEYGIK-FFETSAKTNLNVENVFMSIAKDIKQRLTE 189

Query: 183 GVFNLLNDFNC---GIKVGYGDVKGDNYVTTFQTGACC 218
                  D      GIK+   D    +  +T +  ACC
Sbjct: 190 ------TDTKAEPQGIKITKQDTAASS--STAEKSACC 213

The following BLAST results are available for this feature:

BLAST of Spo02897.1 vs. NCBI nr
BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
BLAST of Spo02897.1 vs. TAIR (Arabidopsis)

BLAST of Spo02897.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902178447\|gb\|KNA09147.1\|	4.9e-126	98.6	hypothetical protein SOVF_1562...	[more]
gi\|902219139\|gb\|KNA18236.1\|	8.4e-78	69.5	hypothetical protein SOVF_0723...	[more]
gi\|731345078\|ref\|XP_010683735.1\|	1.1e-77	69.5	PREDICTED: ras-related protein...	[more]
gi\|567221272\|ref\|XP_006414265.1\|	3.0e-75	67.7	hypothetical protein EUTSA_v10...	[more]
gi\|15235981\|ref\|NP_193450.1\|	3.0e-75	68.6	RAB GTPase homolog B1C [Arabid...	[more]

BLAST of Spo02897.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPI8_SPIOL	3.4e-126	98.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9RFG8_SPIOL	5.9e-78	69.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8C401_BETVU	7.7e-78	69.5	Uncharacterized protein OS=Bet...	[more]
A0A087GQP7_ARAAL	2.1e-75	68.6	Uncharacterized protein OS=Ara...	[more]
D7MC22_ARALL	2.1e-75	68.6	Putative uncharacterized prote...	[more]

BLAST of Spo02897.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RAB1C_ARATH	1.9e-77	68.6	Ras-related protein RABB1c OS=...	[more]
RAB2B_MAIZE	8.7e-75	68.3	Ras-related protein Rab-2-B OS...	[more]
RAB2A_MAIZE	9.6e-74	68.0	Ras-related protein Rab-2-A OS...	[more]
RAB1B_ARATH	4.8e-73	64.0	Ras-related protein RABB1b OS=...	[more]
YPTV4_VOLCA	5.8e-71	69.3	GTP-binding protein yptV4 OS=V...	[more]

BLAST of Spo02897.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G17170.1	1.1e-78	68.6	RAB GTPase homolog B1C	[more]
AT4G35860.1	2.7e-74	64.0	GTP-binding 2	[more]
AT4G17160.1	2.2e-68	61.6	RAB GTPase homolog B1A	[more]
AT3G09900.1	9.3e-43	41.8	RAB GTPase homolog E1E	[more]
AT5G03520.1	1.8e-41	42.2	RAB GTPase homolog 8C	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 10..176 score: 4.1
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 9..170 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..183 score: 5.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..190 score: 1.28
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 32..48 score: 1.5E-35coord: 154..176 score: 1.5E-35coord: 9..30 score: 1.5E-35coord: 54..76 score: 1.5E-35coord: 117..130 score: 1.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..219 score: 2.1E
None	No IPR available	PANTHER	PTHR24073:SF545	RAS-RELATED PROTEIN RABB1C	coord: 1..219 score: 2.1E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..179 score: 2.2
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 11..179 score: 6.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..179 score: 2.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..233 score: 6.
None	No IPR available	PROFILE	PS51419	RAB	coord: 4..217 score: 33

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005773	vacuole
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo03786	0.65	Barchart \| Table
Spo24783	0.65	Barchart \| Table