Spo13119 (gene) | SpinachBase

Overview


Name	Spo13119
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing family protein
Location	SpoScf_02101 : 39158 .. 43040 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGCATATTTTGATATAAAACGAAGCCAAAAAAGATGTATTCTAGCTGAACAATGCTTGCAAGTTGCAAGATATAATTAGTTGTACCATGCATGAGCCGCAATTAGTTATACGCTCATTCGTTAATTCCTTTAACGATTTCCCGTAATTTGTAGGAAATGTTATCATTTGGTTGTGAATTCGGTGCTAGGCCCAATTCACAAAGTGAGTATTTCAGCAACTACAAGTCTACAAGCAGCAAATTTGGAAGTAAAAACAAAACAAACAAAAAAATAAAATCTTGGGCAGAAATGAGGTTTACCGCCAGTACGAGTCAAGTACAACAAGCACCGCCAATTCTCCCTTGGAATTCGACACCAACTTCACCACTAACCCAGAATGTTTCTCCTAACACATGGGTCGCATCCACTGCAAAGCATAACATCTCTCTTAAGCAATTCCACAACCAGGTTGACCCCATTGTTCCATGGACTTCTGCCATTGCTCGCCACTGCAAAAATGGCAATATTTCTCATGCATTCAAGGAATTCACCCGTATGCGATTCTCTGATATTCACCCTAATCATATTACATTCATCACTCTTCTCTCTGGCATTGCCCATTATCCTTCTCAAGGTAGACTTTTTGCTGCTCCTTTACATGCATATGTTTGTAAAATGGGGTTAGATAGGCCTAATGTCAAAGTGGGTACCGCCCTCGTTGACATGTACTCTAAATGTGGCTTCGTGGATTCTGCAAGACTCTGTTTTGATGATATTTCTGAGAAGAATTCCGTGTCTTGGAATACTATGATTGATGGCTATATGAGGAATGGTAAGGTTGATCATGCACTCCAACTGTTTGATGAAATGCCTGTGAAAGACGCAATTTCTTGGACCGCATTGATTGGTGGATTTGTGAAGAAGGGTCTTGATGAGGAAGCTTTGGAATGTTTCTTTGAGATGCAACTTTCTGGGGTGGAGTCGGATTATGTAACCATCATTGCTGTGCTTTCTGCGTGTGCTAATTTAGGAGCGCTTAGTTTAGGGTTGTGGATTAATAGGTTTGTCATGGGAAAATATTTTAGGGATAATATCCGTCTTTGTAACACATTGTTAGAGATGTATTCACGGTGTGGTCGTGTAGATTTTGCTCGTGAAATTTTCGAGAAGATGCCAAGTCGTACTTTGGTATCATGGAACACAATGATTGGTGGATTTGCAATGAATGGGCTTGTTGAAGAGGCATTAATTCTTTTTGATAGGATGCAGAGGGAAGGCTTCAAACCAGATGGTGTCAGTTTTACCGGAGCTCTTACTGCCTGCAGTCACGCTGGTTTGGTAGATCAAGGGCTCGAGTACTTTGATGGCATGCAAAATGTTCACAATCTTTCTCCTCGTATTGAGCATTATGGTTGCTTAGTTGATCTCTACAGCCGTGCAGGGAGGTTAGAAGATGCATTAAGTGTGATAAAAAACATGCCGATGAAGCCTAATGAAGTTGTATTAGGATCACTGCTGGCAGCATGCAGAAATTGTGGGGACATTAACTTAGCAGAGGTTGTCATGAAATTTTTGGTGGAGTTGGATCCAAGCTCTGATTCAAACTATGTGATGCTTGCAAACATGTATGCTGCTGTTGGAAGTTGGGAGGGTGCAGGTAAGGTTCGAAGGAATATGAGAACTCGTGGGATACAAAAGAGACCCGGTATAAGCTCAATTGAGATAGAGGGTGGCATTCATGAATTCATGGCCGGTGATAAATCTCATTCTCAGACAGATTCTATCTATGAAATTCTAGAGCTTCTGTCATATGAACTGGAGAATTATGGATATATTCGAGAAGCTGCAGTACCAGAATTATAAGGTATTCTCAACTTCAATGTCATGCTGTGAATTTATTTTGTAACTAGAGGAAGTAAATTTCATATAGCAATTCCTTTATTTTACCGGTACAGTGAATTTCCGCATCAGATAGAGGTTCTGACAGAGAATTCGAGCCTTTATCCCAAATTCAACATTGTTGTATCTTTCGTTTACCATGAAGTGTTCTGCAATTATTTTGATTGATTATTGCCCAAACTGAAACTTGCTAATTTTCACATAACAGTAAAGCTGTCTAAAAGTTCCCTCTGCATCTTGAAAACAAGAAGAACAGGACTTCAAAATTTTATGTATTCCAGCAGCAACAAAGTATGGTAAACGAAATAATCTTTTGGTGATGCAAAAACTGAACTATTAATTTGACACCCTGTATCATAAAATCCAGAATGTATTGATAACTTAGTTTTAGTTTTGGACAAGCTTAATAATATTTTACTAACATAATCTTCAGCATTCGAGAAGTCTAGCGAATTTCACACTTGAAATTTACACAGCAACAGAAAATTGTCTAGCATCTTCCCTAACAATAATAAATAATACTACGTACTTGGTATAGTAGTATTACTTAACTACTTATCCACTAATCTGTTAGCCTCCAAAGTTTTCCTCTCACAATTATCTCAGACTTCCCTTGAATTTTGCAGGCCCCGAGAAATGCCCTCCACAAACACGCATCGGGCTCCATCTCCATGCTCTCAATAATTCCTCTAGCTTCTTCTATTTTGCCAGCTCTACCCAACATATCAACCATACAACTACAATGTTCCTTGGTTGGCCGTATATGAAATATCTCAACCATCATCTCAAAATATTCCTCCCCCTCCTTTACCCTTCCTCCATGACTACAAGCTGTGAGAATTGTGGTAAACATCACCTCGTCTGGCCAAACACCCGCAACCAACATCTTATCAAACAAACAAAATACCTCATCAGCGTTCCCATGCATTCCATAACCACCCATCATGGCACTCCATGTAATCAAGTTTCTTCTAGGCATTTTATCGAACACTTTACGTGCAGACTCCAACTCACCGCACTTACAGTACATTGTGATCAAGGCGTTGCAATGTGCAATATCAAAACCAAACCCATGTACCAAAACGAAACTGTGGATTCGCCGCCCAATTCTTAAGTACGAAAGTGCGGCGACAGATTTAAGAACTGCGGGAAGGGTGTTGAGGTCAATCGGTTTGCGATCTTGGAGCAATTGATGGAAAGAAGAAAGAGAAAGATGAAACTGCTTGGTAGAAGCGTAGCCCCTGATAAAGGTGTTGTAGAGAAAGGTGAATTTACGGTTAGTGAAAGAGAACATAAGCTCAGCATCGGAAAATTCAGCACAAGCGGTGTAGGAAGAGACGAGCTTTGCTCGGATGAAGTCATTGCATGAAAACCCCAGTTTAATAGTTTGGGAATGGAGTATCCGCAGGTTTTGGAGGTTCTTGGTTCCGCAACAGAGCTCCAGAAGTGAAGCGCAAGCAAGCATGTTTCGAGGTAGACTCATCTCAAATTCTCATTGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTTTTAATTCTTCAAACAAAGTTTTAGCCCGCTTCACCCATGTGACTGTCTAGCTTCTCGCCATTTCTATTCCCACTCTCGCGGAGCAGGGAGTAATATTTCAATATCCTTTGTTACTTAAACATGAATGTAACTAGGTCCACGATATAATTAGTTTTGTTTTTTTCCAAAACGGTAGTCACTAATGTACTTGGAAAATGGCTGGTTGTAACTTTTTTTTTGGTCCGAATGGCTATTTTAAAAACTCTAGAGAGAAGACGGTTACCCATATGGCCCTGAACTGTCTGGGTAGTAAACTGTTATGGCGAATGTCTCCATTGAGGTTGGACATGAACGAGTGGAAGCATAGTTTCTTTGAATGGTGTGTGTTCTTCGCAAAGTCTAGCAACACTGACAGAGTGTGGGAGTTCGCAATGCTTATTATATGGAAGACATGGAACATGAGGAACAAATGGGTGTTTGAGAAGAAGAG

mRNA sequence

GTAGCATATTTTGATATAAAACGAAGCCAAAAAAGATGTATTCTAGCTGAACAATGCTTGCAAGTTGCAAGATATAATTAGTTGTACCATGCATGAGCCGCAATTAGTTATACGCTCATTCGTTAATTCCTTTAACGATTTCCCGTAATTTGTAGGAAATGTTATCATTTGGTTGTGAATTCGGTGCTAGGCCCAATTCACAAAGTGAGTATTTCAGCAACTACAAGTCTACAAGCAGCAAATTTGGAAGTAAAAACAAAACAAACAAAAAAATAAAATCTTGGGCAGAAATGAGGTTTACCGCCAGTACGAGTCAAGTACAACAAGCACCGCCAATTCTCCCTTGGAATTCGACACCAACTTCACCACTAACCCAGAATGTTTCTCCTAACACATGGGTCGCATCCACTGCAAAGCATAACATCTCTCTTAAGCAATTCCACAACCAGGTTGACCCCATTGTTCCATGGACTTCTGCCATTGCTCGCCACTGCAAAAATGGCAATATTTCTCATGCATTCAAGGAATTCACCCGTATGCGATTCTCTGATATTCACCCTAATCATATTACATTCATCACTCTTCTCTCTGGCATTGCCCATTATCCTTCTCAAGGTAGACTTTTTGCTGCTCCTTTACATGCATATGTTTGTAAAATGGGGTTAGATAGGCCTAATGTCAAAGTGGGTACCGCCCTCGTTGACATGTACTCTAAATGTGGCTTCGTGGATTCTGCAAGACTCTGTTTTGATGATATTTCTGAGAAGAATTCCGTGTCTTGGAATACTATGATTGATGGCTATATGAGGAATGGTAAGGTTGATCATGCACTCCAACTGTTTGATGAAATGCCTGTGAAAGACGCAATTTCTTGGACCGCATTGATTGGTGGATTTGTGAAGAAGGGTCTTGATGAGGAAGCTTTGGAATGTTTCTTTGAGATGCAACTTTCTGGGGTGGAGTCGGATTATGTAACCATCATTGCTGTGCTTTCTGCGTGTGCTAATTTAGGAGCGCTTAGTTTAGGGTTGTGGATTAATAGGTTTGTCATGGGAAAATATTTTAGGGATAATATCCGTCTTTGTAACACATTGTTAGAGATGTATTCACGGTGTGGTCGTGTAGATTTTGCTCGTGAAATTTTCGAGAAGATGCCAAGTCGTACTTTGGTATCATGGAACACAATGATTGGTGGATTTGCAATGAATGGGCTTGTTGAAGAGGCATTAATTCTTTTTGATAGGATGCAGAGGGAAGGCTTCAAACCAGATGGTGTCAGTTTTACCGGAGCTCTTACTGCCTGCAGTCACGCTGGTTTGGTAGATCAAGGGCTCGAGTACTTTGATGGCATGCAAAATGTTCACAATCTTTCTCCTCGTATTGAGCATTATGGTTGCTTAGTTGATCTCTACAGCCGTGCAGGGAGGTTAGAAGATGCATTAAGTGTGATAAAAAACATGCCGATGAAGCCTAATGAAGTTGTATTAGGATCACTGCTGGCAGCATGCAGAAATTGTGGGGACATTAACTTAGCAGAGGTTGTCATGAAATTTTTGGTGGAGTTGGATCCAAGCTCTGATTCAAACTATGTGATGCTTGCAAACATGTATGCTGCTGTTGGAAGTTGGGAGGGTGCAGGTAAGGTTCGAAGGAATATGAGAACTCGTGGGATACAAAAGAGACCCGGTATAAGCTCAATTGAGATAGAGGGTGGCATTCATGAATTCATGGCCGGTGATAAATCTCATTCTCAGACAGATTCTATCTATGAAATTCTAGAGCTTCTGTCATATGAACTGGAGAATTATGGATATATTCGAGAAGCTGCAGTACCAGAATTATAAGCCCCGAGAAATGCCCTCCACAAACACGCATCGGGCTCCATCTCCATGCTCTCAATAATTCCTCTAGCTTCTTCTATTTTGCCAGCTCTACCCAACATATCAACCATACAACTACAATGTTCCTTGGTTGGCCGTATATGAAATATCTCAACCATCATCTCAAAATATTCCTCCCCCTCCTTTACCCTTCCTCCATGACTACAAGCTGTGAGAATTGTGGTAAACATCACCTCGTCTGGCCAAACACCCGCAACCAACATCTTATCAAACAAACAAAATACCTCATCAGCGTTCCCATGCATTCCATAACCACCCATCATGGCACTCCATGTAATCAAGTTTCTTCTAGGCATTTTATCGAACACTTTACGTGCAGACTCCAACTCACCGCACTTACAGTACATTGTGATCAAGGCGTTGCAATGTGCAATATCAAAACCAAACCCATGTACCAAAACGAAACTGTGGATTCGCCGCCCAATTCTTAAGTACGAAAGTGCGGCGACAGATTTAAGAACTGCGGGAAGGGTGTTGAGGTCAATCGGTTTGCGATCTTGGAGCAATTGATGGAAAGAAGAAAGAGAAAGATGAAACTGCTTGGTAGAAGCGTAGCCCCTGATAAAGGTGTTGTAGAGAAAGGTGAATTTACGGTTAGTGAAAGAGAACATAAGCTCAGCATCGGAAAATTCAGCACAAGCGGTGTAGGAAGAGACGAGCTTTGCTCGGATGAAGTCATTGCATGAAAACCCCAGTTTAATAGTTTGGGAATGGAGTATCCGCAGGTTTTGGAGGTTCTTGGTTCCGCAACAGAGCTCCAGAAGTGAAGCGCAAGCAAGCATGTTTCGAGGTAGACTCATCTCAAATTCTCATTGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTTTTAATTCTTCAAACAAAGTTTTAGCCCGCTTCACCCATGTGACTGTCTAGCTTCTCGCCATTTCTATTCCCACTCTCGCGGAGCAGGGAGTAATATTTCAATATCCTTTGTTACTTAAACATGAATGTAACTAGGTCCACGATATAATTAGTTTTGTTTTTTTCCAAAACGGTAGTCACTAATGTACTTGGAAAATGGCTGGTTGTAACTTTTTTTTTGGTCCGAATGGCTATTTTAAAAACTCTAGAGAGAAGACGGTTACCCATATGGCCCTGAACTGTCTGGGTAGTAAACTGTTATGGCGAATGTCTCCATTGAGGTTGGACATGAACGAGTGGAAGCATAGTTTCTTTGAATGGTGTGTGTTCTTCGCAAAGTCTAGCAACACTGACAGAGTGTGGGAGTTCGCAATGCTTATTATATGGAAGACATGGAACATGAGGAACAAATGGGTGTTTGAGAAGAAGAG

Coding sequence (CDS)

ATGTTATCATTTGGTTGTGAATTCGGTGCTAGGCCCAATTCACAAAGTGAGTATTTCAGCAACTACAAGTCTACAAGCAGCAAATTTGGAAGTAAAAACAAAACAAACAAAAAAATAAAATCTTGGGCAGAAATGAGGTTTACCGCCAGTACGAGTCAAGTACAACAAGCACCGCCAATTCTCCCTTGGAATTCGACACCAACTTCACCACTAACCCAGAATGTTTCTCCTAACACATGGGTCGCATCCACTGCAAAGCATAACATCTCTCTTAAGCAATTCCACAACCAGGTTGACCCCATTGTTCCATGGACTTCTGCCATTGCTCGCCACTGCAAAAATGGCAATATTTCTCATGCATTCAAGGAATTCACCCGTATGCGATTCTCTGATATTCACCCTAATCATATTACATTCATCACTCTTCTCTCTGGCATTGCCCATTATCCTTCTCAAGGTAGACTTTTTGCTGCTCCTTTACATGCATATGTTTGTAAAATGGGGTTAGATAGGCCTAATGTCAAAGTGGGTACCGCCCTCGTTGACATGTACTCTAAATGTGGCTTCGTGGATTCTGCAAGACTCTGTTTTGATGATATTTCTGAGAAGAATTCCGTGTCTTGGAATACTATGATTGATGGCTATATGAGGAATGGTAAGGTTGATCATGCACTCCAACTGTTTGATGAAATGCCTGTGAAAGACGCAATTTCTTGGACCGCATTGATTGGTGGATTTGTGAAGAAGGGTCTTGATGAGGAAGCTTTGGAATGTTTCTTTGAGATGCAACTTTCTGGGGTGGAGTCGGATTATGTAACCATCATTGCTGTGCTTTCTGCGTGTGCTAATTTAGGAGCGCTTAGTTTAGGGTTGTGGATTAATAGGTTTGTCATGGGAAAATATTTTAGGGATAATATCCGTCTTTGTAACACATTGTTAGAGATGTATTCACGGTGTGGTCGTGTAGATTTTGCTCGTGAAATTTTCGAGAAGATGCCAAGTCGTACTTTGGTATCATGGAACACAATGATTGGTGGATTTGCAATGAATGGGCTTGTTGAAGAGGCATTAATTCTTTTTGATAGGATGCAGAGGGAAGGCTTCAAACCAGATGGTGTCAGTTTTACCGGAGCTCTTACTGCCTGCAGTCACGCTGGTTTGGTAGATCAAGGGCTCGAGTACTTTGATGGCATGCAAAATGTTCACAATCTTTCTCCTCGTATTGAGCATTATGGTTGCTTAGTTGATCTCTACAGCCGTGCAGGGAGGTTAGAAGATGCATTAAGTGTGATAAAAAACATGCCGATGAAGCCTAATGAAGTTGTATTAGGATCACTGCTGGCAGCATGCAGAAATTGTGGGGACATTAACTTAGCAGAGGTTGTCATGAAATTTTTGGTGGAGTTGGATCCAAGCTCTGATTCAAACTATGTGATGCTTGCAAACATGTATGCTGCTGTTGGAAGTTGGGAGGGTGCAGGTAAGGTTCGAAGGAATATGAGAACTCGTGGGATACAAAAGAGACCCGGTATAAGCTCAATTGAGATAGAGGGTGGCATTCATGAATTCATGGCCGGTGATAAATCTCATTCTCAGACAGATTCTATCTATGAAATTCTAGAGCTTCTGTCATATGAACTGGAGAATTATGGATATATTCGAGAAGCTGCAGTACCAGAATTATAA

Protein sequence

MLSFGCEFGARPNSQSEYFSNYKSTSSKFGSKNKTNKKIKSWAEMRFTASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13119.1	Spo13119.1	mRNA

Homology

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BLAST of Spo13119.1 vs. NCBI nr
Match: gi|902085173|gb|KNA03178.1| (hypothetical protein SOVF_211680 [Spinacia oleracea])

HSP 1 Score: 1058.5 bits (2736), Expect = 4.000e-306
Identity = 516/517 (99.81%), Postives = 517/517 (100.00%), Query Frame = 1

		  
Query: 45  MRFTASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW 104
           MRFTAS+SQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW
Sbjct: 1   MRFTASSSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW 60

Query: 105 TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV 164
           TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV
Sbjct: 61  TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV 120

Query: 165 CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA 224
           CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA
Sbjct: 121 CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA 180

Query: 225 LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL 284
           LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL
Sbjct: 181 LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL 240

Query: 285 GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI 344
           GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI
Sbjct: 241 GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI 300

Query: 345 GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL 404
           GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL
Sbjct: 301 GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL 360

Query: 405 SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK 464
           SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK
Sbjct: 361 SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK 420

Query: 465 FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM 524
           FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM
Sbjct: 421 FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM 480

Query: 525 AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 562
           AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL
Sbjct: 481 AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 517

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BLAST of Spo13119.1 vs. NCBI nr
Match: gi|731348308|ref|XP_010685430.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 818.9 bits (2114), Expect = 5.300e-234
Identity = 406/514 (78.99%), Postives = 441/514 (85.80%), Query Frame = 1

		  
Query: 48  TASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQV-DPIVPWTS 107
           TA+ SQVQQ                 N+SPN+       +NISLKQFH QV DPIVPWTS
Sbjct: 8   TATLSQVQQQ---------------HNISPNS-------NNISLKQFHKQVVDPIVPWTS 67

Query: 108 AIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCK 167
           +IAR CKNG +S A  EFTRMR S I PNHITFITLLSGIAHYPSQG  FAA +HAYV K
Sbjct: 68  SIARLCKNGKLSAAVNEFTRMRISGIEPNHITFITLLSGIAHYPSQGHHFAASMHAYVLK 127

Query: 168 MGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQ 227
           +GLDRPNVKVGTA+VDMYSKCG V+ ARL FD I  KNSVSWNTMIDGYMRN K+D+ALQ
Sbjct: 128 LGLDRPNVKVGTAIVDMYSKCGLVELARLTFDHIFHKNSVSWNTMIDGYMRNDKIDNALQ 187

Query: 228 LFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGA 287
           LFDEMP +DAISWTALIGGFVKKGL ++AL+CF EMQL GVE DYVT+IAVLSACANLGA
Sbjct: 188 LFDEMPKRDAISWTALIGGFVKKGLYKKALQCFCEMQLDGVEPDYVTVIAVLSACANLGA 247

Query: 288 LSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGG 347
           LSLGLW NRFVMGK F+DNIRLCNT ++MYSRCGRVDFAR IFEKMP+R+LVSWN+M+GG
Sbjct: 248 LSLGLWTNRFVMGKDFQDNIRLCNTFIDMYSRCGRVDFARYIFEKMPTRSLVSWNSMLGG 307

Query: 348 FAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSP 407
           FA NG VEEAL LFDRMQREGF PDGVSFTGALTACSHAG VD+GL+YFD M+ VHNL P
Sbjct: 308 FAANGHVEEALTLFDRMQREGFSPDGVSFTGALTACSHAGFVDKGLKYFDDMKRVHNLPP 367

Query: 408 RIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFL 467
           RIEHYGCLVDLYSRAGRLEDAL V+KNMPMKPNEVVLGSLLAACRNCGDI LAE+VMKFL
Sbjct: 368 RIEHYGCLVDLYSRAGRLEDALHVVKNMPMKPNEVVLGSLLAACRNCGDIGLAEMVMKFL 427

Query: 468 VELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAG 527
           VELDPSSDSNYVMLANMYAAVGSWEGAGKVRR M+TRGIQK+PGISSIEIEGG+H FMAG
Sbjct: 428 VELDPSSDSNYVMLANMYAAVGSWEGAGKVRRKMKTRGIQKKPGISSIEIEGGVHVFMAG 487

Query: 528 DKSHSQTDSIYEILELLSYELENYGYIREAAVPE 561
           DKSHS TDSIYEI+ELLSY+L  YGYI E  +PE
Sbjct: 488 DKSHSGTDSIYEIMELLSYDLGIYGYIPETLLPE 499

[Close]

BLAST of Spo13119.1 vs. NCBI nr
Match: gi|1009113399|ref|XP_015873124.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 674.9 bits (1740), Expect = 1.200e-190
Identity = 322/511 (63.01%), Postives = 400/511 (78.28%), Query Frame = 1

		  
Query: 45  MRFTASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW 104
           M   A+T       P  P    P++P  +  SPNT      K ++SLKQ H Q+DP V W
Sbjct: 1   MSVPANTLPPTLPQPAKPLTLPPSNPTIRPTSPNT--PRREKRSVSLKQTHKQIDPTVSW 60

Query: 105 TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV 164
           TS+IARHC+NG +S A  EF RMR + + PNHIT ITLLSG A +P     F A +H Y 
Sbjct: 61  TSSIARHCRNGRLSEAAAEFARMRLTGVEPNHITLITLLSGCADFPLDILCFGASVHGYA 120

Query: 165 CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA 224
            K GLDR NV VGTA+VDMY+KCG +D +RL FDD+  KN+V+WNT+IDGYMRNG+V+ A
Sbjct: 121 RKSGLDRDNVMVGTAIVDMYAKCGRMDFSRLAFDDLGVKNTVTWNTLIDGYMRNGEVECA 180

Query: 225 LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL 284
           +++F+EMP +DAISWTALIGGF+K+G  EE+L+ F +MQ+SGV+ DYVT+IAVL ACA L
Sbjct: 181 VEMFEEMPDRDAISWTALIGGFIKRGRLEESLKWFRQMQISGVKPDYVTMIAVLDACAEL 240

Query: 285 GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI 344
           G L LGLW N+++M K ++DNIR+ N+L++MYSRCG + FAR++FEKMP RTLVSWN++I
Sbjct: 241 GTLGLGLWTNKYIMNKDYKDNIRMNNSLIDMYSRCGCIQFARQVFEKMPERTLVSWNSII 300

Query: 345 GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL 404
            GFA+NG  EEAL  FD MQ+EGFKPDGVSFTGALTACSH+GLVD+GL +F+ M+ VH +
Sbjct: 301 VGFAINGHAEEALEFFDLMQKEGFKPDGVSFTGALTACSHSGLVDEGLSFFNNMKRVHKI 360

Query: 405 SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK 464
            PRIEHYGC+VDLYSRAGRLEDAL VI+ MPMKPNEVV+GSLLAACR  GD++LAE +MK
Sbjct: 361 KPRIEHYGCMVDLYSRAGRLEDALHVIEKMPMKPNEVVVGSLLAACRTHGDVSLAERLMK 420

Query: 465 FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM 524
           +L ELDP  DSNYV+LAN+YAAVG W+GAGKVR+ M+  G+QK PG+SSIEI+  IHEF+
Sbjct: 421 YLFELDPGGDSNYVLLANIYAAVGRWDGAGKVRKTMKALGVQKTPGLSSIEIDCNIHEFV 480

Query: 525 AGDKSHSQTDSIYEILELLSYELENYGYIRE 556
           AGDKSH  T+ IYE+LELLS EL+  GYI E
Sbjct: 481 AGDKSHVDTECIYEMLELLSLELKACGYIPE 509

[Close]

BLAST of Spo13119.1 vs. NCBI nr
Match: gi|694399333|ref|XP_009374796.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 664.1 bits (1712), Expect = 2.200e-187
Identity = 319/518 (61.58%), Postives = 403/518 (77.80%), Query Frame = 1

		  
Query: 47  FTASTSQV----QQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIV 106
           +TA+  Q+    +Q PP LP    P    + + +PN +     KH++SL++    +DP V
Sbjct: 6   YTATPIQLPQLPKQPPPFLP---LPNPSQSTSPNPNQY----RKHSVSLERTKTPIDPTV 65

Query: 107 PWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHA 166
            WTS+I+  C+NG+++ A   F +MR + + PNH+TF+TLLSG AH+P++G LF   LHA
Sbjct: 66  SWTSSISHRCRNGHLAEALAHFIQMRRAGVEPNHVTFVTLLSGCAHFPAKGVLFGPSLHA 125

Query: 167 YVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVD 226
           Y  K+GLD  NV VGTA++DMY+KCG VD ARL FD +  KNS+SWNTMIDGYM+NGKV 
Sbjct: 126 YARKLGLDTNNVMVGTAVIDMYAKCGGVDFARLVFDGLDVKNSMSWNTMIDGYMKNGKVR 185

Query: 227 HALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACA 286
            A++LF++MP +DA+SWT LIGGFVKKG  E+ALE F EMQL+GVE DYVTIIAV++ACA
Sbjct: 186 DAVELFEKMPKRDAVSWTVLIGGFVKKGQFEQALEWFREMQLAGVEPDYVTIIAVIAACA 245

Query: 287 NLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNT 346
           +LG L LGLW+N FVM + F+DN+R+ N+L++MYSRCG + FAR++FE MP RTLVSWN+
Sbjct: 246 DLGTLGLGLWLNCFVMKRDFKDNVRISNSLVDMYSRCGCIGFARQVFENMPERTLVSWNS 305

Query: 347 MIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVH 406
           MI GFA+NG  EEAL  F+ MQ++G KPDGVSFTGALTACSHAGLVD+GL YFD M+ VH
Sbjct: 306 MIVGFAVNGHAEEALEFFNLMQKKGLKPDGVSFTGALTACSHAGLVDEGLHYFDNMKGVH 365

Query: 407 NLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVV 466
            ++PRIEHYGC+VDLYSRAGRLEDAL VI+NMPMKPNEVVLGSLLAACR  G+I+LAE +
Sbjct: 366 RITPRIEHYGCIVDLYSRAGRLEDALGVIENMPMKPNEVVLGSLLAACRTIGNISLAERL 425

Query: 467 MKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHE 526
           MK+L E+DP  DSNYV+LAN+YAA G W+GA KVR+ M+  G+QK PG SS+E++  IHE
Sbjct: 426 MKYLSEVDPGVDSNYVLLANIYAAAGRWDGANKVRKKMKDLGVQKTPGCSSVEVDCNIHE 485

Query: 527 FMAGDKSHSQTDSIYEILELLSYELENYGYIREAAVPE 561
           F+AGDKSH  TD IY  LELLS+EL   GY+ E  V E
Sbjct: 486 FVAGDKSHVDTDCIYSTLELLSFELILCGYVPENIVRE 516

[Close]

BLAST of Spo13119.1 vs. NCBI nr
Match: gi|694391988|ref|XP_009371490.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 663.7 bits (1711), Expect = 2.900e-187
Identity = 319/518 (61.58%), Postives = 402/518 (77.61%), Query Frame = 1

		  
Query: 47  FTASTSQV----QQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIV 106
           +TA+  Q+    +Q PP LP    P    + + +PN +     KH++SL++    +DP V
Sbjct: 6   YTATPIQLPQLPKQPPPFLP---LPNPSQSTSPNPNQY----RKHSVSLERTKTPIDPTV 65

Query: 107 PWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHA 166
            WTS+I+  C+NG+++ A   F +MR + + PNH+TF+TLLSG AH+P++G LF   LHA
Sbjct: 66  SWTSSISHRCRNGHLAEALAHFIQMRRAGVEPNHVTFVTLLSGCAHFPAKGVLFGPSLHA 125

Query: 167 YVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVD 226
           Y  K+GLD  NV VGTA++DMY+KCG VD ARL FD +  KNS+SWNTMIDGYM+NGKV 
Sbjct: 126 YARKLGLDTNNVMVGTAVIDMYAKCGGVDFARLVFDGLDVKNSMSWNTMIDGYMKNGKVR 185

Query: 227 HALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACA 286
            A++LF++MP +DA+SWT LIGGFVKKG  E+ALE F EMQL+GVE DYVTIIAV++ACA
Sbjct: 186 DAVELFEKMPKRDAVSWTVLIGGFVKKGQFEQALEWFREMQLAGVEPDYVTIIAVIAACA 245

Query: 287 NLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNT 346
            LG L LGLW+N FVM + F+DN+R+ N+L++MYSRCG + FAR++FE MP RTLVSWN+
Sbjct: 246 ELGTLGLGLWLNCFVMKRDFKDNVRISNSLVDMYSRCGCIGFARQVFENMPERTLVSWNS 305

Query: 347 MIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVH 406
           MI GFA+NG  EEAL  F+ MQ++G KPDGVSFTGALTACSHAGLVD+GL YFD M+ VH
Sbjct: 306 MIVGFAVNGHAEEALEFFNLMQKKGLKPDGVSFTGALTACSHAGLVDEGLHYFDNMKGVH 365

Query: 407 NLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVV 466
            ++PRIEHYGC+VDLYSRAGRLEDAL VI+NMPMKPNEVVLGSLLAACR  G+I+LAE +
Sbjct: 366 RITPRIEHYGCMVDLYSRAGRLEDALGVIENMPMKPNEVVLGSLLAACRTIGNISLAERL 425

Query: 467 MKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHE 526
           MK+L E+DP  DSNYV+LAN+YAA G W+GA KVR+ M+  G+QK PG SS+E++  IHE
Sbjct: 426 MKYLSEVDPGVDSNYVLLANIYAAAGRWDGANKVRKKMKDLGVQKTPGCSSVEVDCNIHE 485

Query: 527 FMAGDKSHSQTDSIYEILELLSYELENYGYIREAAVPE 561
           F+AGDKSH  TD IY  LELLS+EL   GY+ E  V E
Sbjct: 486 FVAGDKSHVDTDCIYSTLELLSFELILCGYVPENIVRE 516

[Close]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q919_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_211680 PE=4 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 2.800e-306
Identity = 516/517 (99.81%), Postives = 517/517 (100.00%), Query Frame = 1

		  
Query: 45  MRFTASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW 104
           MRFTAS+SQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW
Sbjct: 1   MRFTASSSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPW 60

Query: 105 TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV 164
           TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV
Sbjct: 61  TSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYV 120

Query: 165 CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA 224
           CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA
Sbjct: 121 CKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHA 180

Query: 225 LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL 284
           LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL
Sbjct: 181 LQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANL 240

Query: 285 GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI 344
           GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI
Sbjct: 241 GALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMI 300

Query: 345 GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL 404
           GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL
Sbjct: 301 GGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNL 360

Query: 405 SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK 464
           SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK
Sbjct: 361 SPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMK 420

Query: 465 FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM 524
           FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM
Sbjct: 421 FLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFM 480

Query: 525 AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 562
           AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL
Sbjct: 481 AGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 517

[Close]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY94_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171040 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 3.700e-234
Identity = 406/514 (78.99%), Postives = 441/514 (85.80%), Query Frame = 1

		  
Query: 48  TASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQV-DPIVPWTS 107
           TA+ SQVQQ                 N+SPN+       +NISLKQFH QV DPIVPWTS
Sbjct: 8   TATLSQVQQQ---------------HNISPNS-------NNISLKQFHKQVVDPIVPWTS 67

Query: 108 AIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCK 167
           +IAR CKNG +S A  EFTRMR S I PNHITFITLLSGIAHYPSQG  FAA +HAYV K
Sbjct: 68  SIARLCKNGKLSAAVNEFTRMRISGIEPNHITFITLLSGIAHYPSQGHHFAASMHAYVLK 127

Query: 168 MGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQ 227
           +GLDRPNVKVGTA+VDMYSKCG V+ ARL FD I  KNSVSWNTMIDGYMRN K+D+ALQ
Sbjct: 128 LGLDRPNVKVGTAIVDMYSKCGLVELARLTFDHIFHKNSVSWNTMIDGYMRNDKIDNALQ 187

Query: 228 LFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGA 287
           LFDEMP +DAISWTALIGGFVKKGL ++AL+CF EMQL GVE DYVT+IAVLSACANLGA
Sbjct: 188 LFDEMPKRDAISWTALIGGFVKKGLYKKALQCFCEMQLDGVEPDYVTVIAVLSACANLGA 247

Query: 288 LSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGG 347
           LSLGLW NRFVMGK F+DNIRLCNT ++MYSRCGRVDFAR IFEKMP+R+LVSWN+M+GG
Sbjct: 248 LSLGLWTNRFVMGKDFQDNIRLCNTFIDMYSRCGRVDFARYIFEKMPTRSLVSWNSMLGG 307

Query: 348 FAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSP 407
           FA NG VEEAL LFDRMQREGF PDGVSFTGALTACSHAG VD+GL+YFD M+ VHNL P
Sbjct: 308 FAANGHVEEALTLFDRMQREGFSPDGVSFTGALTACSHAGFVDKGLKYFDDMKRVHNLPP 367

Query: 408 RIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFL 467
           RIEHYGCLVDLYSRAGRLEDAL V+KNMPMKPNEVVLGSLLAACRNCGDI LAE+VMKFL
Sbjct: 368 RIEHYGCLVDLYSRAGRLEDALHVVKNMPMKPNEVVLGSLLAACRNCGDIGLAEMVMKFL 427

Query: 468 VELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAG 527
           VELDPSSDSNYVMLANMYAAVGSWEGAGKVRR M+TRGIQK+PGISSIEIEGG+H FMAG
Sbjct: 428 VELDPSSDSNYVMLANMYAAVGSWEGAGKVRRKMKTRGIQKKPGISSIEIEGGVHVFMAG 487

Query: 528 DKSHSQTDSIYEILELLSYELENYGYIREAAVPE 561
           DKSHS TDSIYEI+ELLSY+L  YGYI E  +PE
Sbjct: 488 DKSHSGTDSIYEIMELLSYDLGIYGYIPETLLPE 499

[Close]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Match: A0A067F459_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010496mg PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 2.200e-186
Identity = 312/495 (63.03%), Postives = 397/495 (80.20%), Query Frame = 1

		  
Query: 67  PTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPWTSAIARHCKNGNISHAFKEFTR 126
           P  P  QN  PN  + +T + +I      + V+P V WTS+I+RHC++G I+ A  EFTR
Sbjct: 13  PFLPHQQN--PNQNLTTTPQISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTR 72

Query: 127 MRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSK 186
           M     +PNHITFITLLSG A +PSQ     A +H  VCK+GLDR NV VGTAL+DMY+K
Sbjct: 73  MTLHGTNPNHITFITLLSGCADFPSQCLFLGAMIHGLVCKLGLDRNNVMVGTALLDMYAK 132

Query: 187 CGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGF 246
            G +D A + FD +  K+S +WN MIDGYMR G ++ A+++FDEMPV+DAISWTAL+ GF
Sbjct: 133 FGRMDLATVVFDAMRVKSSFTWNAMIDGYMRRGDIESAVRMFDEMPVRDAISWTALLNGF 192

Query: 247 VKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNI 306
           VK+G  EEALECF EMQ+SGVE DYVTII+VL+ACAN+G L +GLWI+R+V+ + F+DN+
Sbjct: 193 VKRGYFEEALECFREMQISGVEPDYVTIISVLNACANVGTLGIGLWIHRYVLKQDFKDNV 252

Query: 307 RLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQRE 366
           ++CNTL+++YSRCG ++FAR++F++M  RTLVSWN++I GFA+NG V EAL  F+ MQ+E
Sbjct: 253 KVCNTLIDLYSRCGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNSMQKE 312

Query: 367 GFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLED 426
           GFKPDGVSFTGALTACSHAGL++ GL YFD M+ ++ +SPRIEHYGC+VDLYSRAGRLED
Sbjct: 313 GFKPDGVSFTGALTACSHAGLIEDGLRYFDIMKKIYRVSPRIEHYGCIVDLYSRAGRLED 372

Query: 427 ALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNYVMLANMYAA 486
           AL+V++NMPMKPNEVVLGSLLAACR  GDI LAE +MK+LV+LDP  DSNYV+LANMYAA
Sbjct: 373 ALNVVENMPMKPNEVVLGSLLAACRTKGDIILAERLMKYLVDLDPGVDSNYVLLANMYAA 432

Query: 487 VGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYE 546
           VG W+GAGK+RR M+ RGIQK+PG+SSIEI  GIHEFMAGD+SH +++ IY +LELLS++
Sbjct: 433 VGKWDGAGKIRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFD 492

Query: 547 LENYGYIREAAVPEL 562
           L+  GY+ E    EL
Sbjct: 493 LKLCGYVPETVAGEL 505

[Close]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Match: A0A061GV80_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_041269 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 4.200e-185
Identity = 317/504 (62.90%), Postives = 394/504 (78.17%), Query Frame = 1

		  
Query: 58  PPILPWNSTPTSPLTQNVSPNTW-VASTAKHNISLKQFHNQVDPIVPWTSAIARHCKNGN 117
           P + P ++T  + L    +P T  + S   H ISLK     +D IV WTS+I+RHC+ G 
Sbjct: 5   PALTPTSATQPNHLVSRQTPKTQPIFSNPNHQISLKP----LDHIVSWTSSISRHCRAGQ 64

Query: 118 ISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCKMGLDRPNVKV 177
           IS A  EFTRMR S++ PNHITF+TLLSG A +P +  +    +H YVCK+GLD+ NV V
Sbjct: 65  ISEAASEFTRMRLSEVEPNHITFVTLLSGCADFPLKSGVLGVLIHGYVCKLGLDKENVMV 124

Query: 178 GTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPVKDA 237
           GTALV+MY+KCG V  A+L FD +  KN VSWNTM+DGYMRNG+ + A+++FDEMP +D 
Sbjct: 125 GTALVEMYAKCGHVKVAKLVFDVMRVKNLVSWNTMVDGYMRNGEYEKAVEIFDEMPQRDV 184

Query: 238 ISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGALSLGLWINRF 297
           ISWTALI GF ++G  EEAL+ F EM + GV+ DYV IIAVL+ACANLGAL +GLWI+RF
Sbjct: 185 ISWTALINGFARRGFHEEALDWFREMMIFGVKPDYVVIIAVLTACANLGALGVGLWIHRF 244

Query: 298 VMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEA 357
           V+ + FRDN+R+ N+L++MYSRCG ++ ARE+F+KM  RTLVSWN++I GFA+NG  EEA
Sbjct: 245 VLKQSFRDNVRVNNSLIDMYSRCGCIELAREVFDKMQKRTLVSWNSIIVGFAVNGFAEEA 304

Query: 358 LILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVD 417
           L  FD MQ+EGFKPDGVSFTGALTACSHAGLVD+GL YF  M+ V+ +SPRIEH+GC+VD
Sbjct: 305 LKYFDSMQKEGFKPDGVSFTGALTACSHAGLVDEGLRYFGIMKRVYRISPRIEHFGCIVD 364

Query: 418 LYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSN 477
           LYSRAG+LE+AL VI+NMPMKPNEVVLGSLLAACRN GDI+LAE ++K LV LDP SDSN
Sbjct: 365 LYSRAGKLEEALDVIENMPMKPNEVVLGSLLAACRNHGDISLAERIVKNLVALDPGSDSN 424

Query: 478 YVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSI 537
           YV+LAN+YAAVG WEGA KVRR M+  GIQK+PG SSIEI G +HEF+AGDKSH +T+ I
Sbjct: 425 YVLLANIYAAVGRWEGASKVRRRMKALGIQKKPGFSSIEISGCVHEFVAGDKSHLETECI 484

Query: 538 YEILELLSYELENYGYIREAAVPE 561
           Y++LELL ++L   GY  E  V E
Sbjct: 485 YKMLELLCFDLLLSGYAPEIVVGE 504

[Close]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Match: F6HAB7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g00650 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 2.500e-182
Identity = 314/512 (61.33%), Postives = 396/512 (77.34%), Query Frame = 1

		  
Query: 47  FTASTSQVQQAPPILPWNSTPTSPLTQNVSPNTWVASTAKHNISLKQFHNQVDPIVPWTS 106
           +TA+T       P    NS+P S   Q   P+     + K++++    H+ +DPIV WTS
Sbjct: 6   YTATTPSSLVTHP----NSSPNSKPNQPTFPSR--PHSTKYHLTRSHTHSPIDPIVSWTS 65

Query: 107 AIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCK 166
           +IA HC+NG +  A  EF+RM+ + + PNHITF+TLLS    +P +G  F   +HAYV K
Sbjct: 66  SIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRK 125

Query: 167 MGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQ 226
           +GLD  NV VGTALVDMYSKCG +D A L FD++  +NSVSWNTMIDG MRNG+V  A+ 
Sbjct: 126 LGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIV 185

Query: 227 LFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGA 286
           LFD+M  +DAISWT++IGGFVKKG  E+ALE F EMQL+GVE DYVTII+VL+ACANLGA
Sbjct: 186 LFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGA 245

Query: 287 LSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGG 346
           L LGLWINRFVM + F+DNI++ N+L++MYSRCG +  AR++FE+MP R+LVSWN+MI G
Sbjct: 246 LGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVG 305

Query: 347 FAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSP 406
           FA+NG  EEAL  F+ M++EGF+PDGVSFTGALTACSH+GLVD+GL++FD M+    +SP
Sbjct: 306 FALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISP 365

Query: 407 RIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFL 466
           RIEHYGCLVDLYSRAGRLEDAL+VI NMPMKPNEVVLGSLLAACR  GD+ LAE +MK+L
Sbjct: 366 RIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYL 425

Query: 467 VELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAG 526
            E+DP SDSNYV+L+N+YAAVG W+GA KVR+ M+  GI K+PG SSIE++G IHEF+AG
Sbjct: 426 CEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAG 485

Query: 527 DKSHSQTDSIYEILELLSYELENYGYIREAAV 559
           DK+H +T +IY +L+ L  EL   GY+ E  V
Sbjct: 486 DKTHVETQNIYAMLDHLFLELRICGYVPEIEV 511

[Close]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 2.400e-157
Identity = 271/472 (57.42%), Postives = 351/472 (74.36%), Query Frame = 1

		  
Query: 93  QFHNQV--DPIVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYP 152
           Q HNQ   +  V WTS I    +NG ++ A KEF+ M  + + PNHITFI LLSG   + 
Sbjct: 26  QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85

Query: 153 SQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNT 212
           S        LH Y CK+GLDR +V VGTA++ MYSK G    ARL FD + +KNSV+WNT
Sbjct: 86  SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145

Query: 213 MIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESD 272
           MIDGYMR+G+VD+A ++FD+MP +D ISWTA+I GFVKKG  EEAL  F EMQ+SGV+ D
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205

Query: 273 YVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFE 332
           YV IIA L+AC NLGALS GLW++R+V+ + F++N+R+ N+L+++Y RCG V+FAR++F 
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265

Query: 333 KMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQ 392
            M  RT+VSWN++I GFA NG   E+L+ F +MQ +GFKPD V+FTGALTACSH GLV++
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325

Query: 393 GLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAAC 452
           GL YF  M+  + +SPRIEHYGCLVDLYSRAGRLEDAL ++++MPMKPNEVV+GSLLAAC
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385

Query: 453 RNCG-DINLAEVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRP 512
            N G +I LAE +MK L +L+  S SNYV+L+NMYAA G WEGA K+RR M+  G++K+P
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445

Query: 513 GISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 562
           G SSIEI+  +H FMAGD +H +T  I E+LEL+S +L   G + E    +L
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497

[Close]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.000e-100
Identity = 192/475 (40.42%), Postives = 291/475 (61.26%), Query Frame = 1

		  
Query: 82  ASTAKHNISLKQFHNQVDP-IVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFI 141
           AS  K   SL  FH  +DP +  +T+AI     NG    AF  + ++  S+I+PN  TF 
Sbjct: 75  ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134

Query: 142 TLLSGIAHYPSQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDI 201
           +LL   +     G+L    +H +V K GL   +  V T LVD+Y+K G V SA+  FD +
Sbjct: 135 SLLKSCS--TKSGKL----IHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRM 194

Query: 202 SEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFF 261
            E++ VS   MI  Y + G V+ A  LFD M  +D +SW  +I G+ + G   +AL  F 
Sbjct: 195 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 254

Query: 262 EMQLSGV-ESDYVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRC 321
           ++   G  + D +T++A LSAC+ +GAL  G WI+ FV     R N+++C  L++MYS+C
Sbjct: 255 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 314

Query: 322 GRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQR-EGFKPDGVSFTGA 381
           G ++ A  +F   P + +V+WN MI G+AM+G  ++AL LF+ MQ   G +P  ++F G 
Sbjct: 315 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 374

Query: 382 LTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKP 441
           L AC+HAGLV++G+  F+ M   + + P+IEHYGCLV L  RAG+L+ A   IKNM M  
Sbjct: 375 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 434

Query: 442 NEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRR 501
           + V+  S+L +C+  GD  L + + ++L+ L+  +   YV+L+N+YA+VG +EG  KVR 
Sbjct: 435 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 494

Query: 502 NMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYELENYGYI 554
            M+ +GI K PGIS+IEIE  +HEF AGD+ HS++  IY +L  +S  ++++GY+
Sbjct: 495 LMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542

[Close]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 3.800e-99
Identity = 182/446 (40.81%), Postives = 273/446 (61.21%), Query Frame = 1

		  
Query: 109 ARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCKMG 168
           + + + G    A   F  M  S + P+ I+ ++ +S  +    +  L+    H YV + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369

Query: 169 LDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLF 228
            +  +  +  AL+DMY KC   D+A   FD +S K  V+WN+++ GY+ NG+VD A + F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429

Query: 229 DEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLS-GVESDYVTIIAVLSACANLGAL 288
           + MP K+ +SW  +I G V+  L EEA+E F  MQ   GV +D VT++++ SAC +LGAL
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489

Query: 289 SLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGF 348
            L  WI  ++     + ++RL  TL++M+SRCG  + A  IF  + +R + +W   IG  
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549

Query: 349 AMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPR 408
           AM G  E A+ LFD M  +G KPDGV+F GALTACSH GLV QG E F  M  +H +SP 
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609

Query: 409 IEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLV 468
             HYGC+VDL  RAG LE+A+ +I++MPM+PN+V+  SLLAACR  G++ +A    + + 
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669

Query: 469 ELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGD 528
            L P    +YV+L+N+YA+ G W    KVR +M+ +G++K PG SSI+I G  HEF +GD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729

Query: 529 KSHSQTDSIYEILELLSYELENYGYI 554
           +SH +  +I  +L+ +S    + G++
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHV 752

[Close]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 1.600e-97
Identity = 170/453 (37.53%), Postives = 281/453 (62.03%), Query Frame = 1

		  
Query: 101 IVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPL 160
           +V W S I    + G+   A + F +M   D+  +H+T + +LS  A    +   F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 161 HAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGK 220
            +Y+ +  ++  N+ +  A++DMY+KCG ++ A+  FD + EK++V+W TM+DGY  +  
Sbjct: 257 CSYIEENRVN-VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 221 VDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLS-GVESDYVTIIAVLS 280
            + A ++ + MP KD ++W ALI  + + G   EAL  F E+QL   ++ + +T+++ LS
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 281 ACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVS 340
           ACA +GAL LG WI+ ++     R N  + + L+ MYS+CG ++ +RE+F  +  R +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 341 WNTMIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQ 400
           W+ MIGG AM+G   EA+ +F +MQ    KP+GV+FT    ACSH GLVD+    F  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 401 NVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLA 460
           + + + P  +HY C+VD+  R+G LE A+  I+ MP+ P+  V G+LL AC+   ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 461 EVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGG 520
           E+    L+EL+P +D  +V+L+N+YA +G WE   ++R++MR  G++K PG SSIEI+G 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 521 IHEFMAGDKSHSQTDSIYEILELLSYELENYGY 553
           IHEF++GD +H  ++ +Y  L  +  +L++ GY
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646

[Close]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.300e-94
Identity = 157/363 (43.25%), Postives = 248/363 (68.32%), Query Frame = 1

		  
Query: 180 LVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPV--KDAI 239
           ++D Y++C  +  A   F+ + E+N+VSW+TM+ GY + G ++ A  +FD+MP+  K+ +
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281

Query: 240 SWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGALSLGLWINRFV 299
           +WT +I G+ +KGL +EA     +M  SG++ D   +I++L+AC   G LSLG+ I+  +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341

Query: 300 MGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEAL 359
                  N  + N LL+MY++CG +  A ++F  +P + LVSWNTM+ G  ++G  +EA+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401

Query: 360 ILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDL 419
            LF RM+REG +PD V+F   L +C+HAGL+D+G++YF  M+ V++L P++EHYGCLVDL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461

Query: 420 YSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNY 479
             R GRL++A+ V++ MPM+PN V+ G+LL ACR   ++++A+ V+  LV+LDP    NY
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521

Query: 480 VMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIY 539
            +L+N+YAA   WEG   +R  M++ G++K  G SS+E+E GIHEF   DKSH ++D IY
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581

Query: 540 EIL 541
           ++L
Sbjct: 582 QML 584

[Close]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Match: AT1G05750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 557.0 bits (1434), Expect = 1.300e-158
Identity = 271/472 (57.42%), Postives = 351/472 (74.36%), Query Frame = 1

		  
Query: 93  QFHNQV--DPIVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYP 152
           Q HNQ   +  V WTS I    +NG ++ A KEF+ M  + + PNHITFI LLSG   + 
Sbjct: 26  QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85

Query: 153 SQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNT 212
           S        LH Y CK+GLDR +V VGTA++ MYSK G    ARL FD + +KNSV+WNT
Sbjct: 86  SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145

Query: 213 MIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLSGVESD 272
           MIDGYMR+G+VD+A ++FD+MP +D ISWTA+I GFVKKG  EEAL  F EMQ+SGV+ D
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205

Query: 273 YVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFE 332
           YV IIA L+AC NLGALS GLW++R+V+ + F++N+R+ N+L+++Y RCG V+FAR++F 
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265

Query: 333 KMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQ 392
            M  RT+VSWN++I GFA NG   E+L+ F +MQ +GFKPD V+FTGALTACSH GLV++
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325

Query: 393 GLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAAC 452
           GL YF  M+  + +SPRIEHYGCLVDLYSRAGRLEDAL ++++MPMKPNEVV+GSLLAAC
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385

Query: 453 RNCG-DINLAEVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRP 512
            N G +I LAE +MK L +L+  S SNYV+L+NMYAA G WEGA K+RR M+  G++K+P
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445

Query: 513 GISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYELENYGYIREAAVPEL 562
           G SSIEI+  +H FMAGD +H +T  I E+LEL+S +L   G + E    +L
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETLAGDL 497

[Close]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 367.9 bits (943), Expect = 1.100e-101
Identity = 192/475 (40.42%), Postives = 291/475 (61.26%), Query Frame = 1

		  
Query: 82  ASTAKHNISLKQFHNQVDP-IVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFI 141
           AS  K   SL  FH  +DP +  +T+AI     NG    AF  + ++  S+I+PN  TF 
Sbjct: 75  ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134

Query: 142 TLLSGIAHYPSQGRLFAAPLHAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDI 201
           +LL   +     G+L    +H +V K GL   +  V T LVD+Y+K G V SA+  FD +
Sbjct: 135 SLLKSCS--TKSGKL----IHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRM 194

Query: 202 SEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFF 261
            E++ VS   MI  Y + G V+ A  LFD M  +D +SW  +I G+ + G   +AL  F 
Sbjct: 195 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 254

Query: 262 EMQLSGV-ESDYVTIIAVLSACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRC 321
           ++   G  + D +T++A LSAC+ +GAL  G WI+ FV     R N+++C  L++MYS+C
Sbjct: 255 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 314

Query: 322 GRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEALILFDRMQR-EGFKPDGVSFTGA 381
           G ++ A  +F   P + +V+WN MI G+AM+G  ++AL LF+ MQ   G +P  ++F G 
Sbjct: 315 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 374

Query: 382 LTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKP 441
           L AC+HAGLV++G+  F+ M   + + P+IEHYGCLV L  RAG+L+ A   IKNM M  
Sbjct: 375 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 434

Query: 442 NEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRR 501
           + V+  S+L +C+  GD  L + + ++L+ L+  +   YV+L+N+YA+VG +EG  KVR 
Sbjct: 435 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 494

Query: 502 NMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIYEILELLSYELENYGYI 554
            M+ +GI K PGIS+IEIE  +HEF AGD+ HS++  IY +L  +S  ++++GY+
Sbjct: 495 LMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYV 542

[Close]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Match: AT3G22690.1 (Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 363.6 bits (932), Expect = 2.200e-100
Identity = 182/446 (40.81%), Postives = 273/446 (61.21%), Query Frame = 1

		  
Query: 109 ARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPLHAYVCKMG 168
           + + + G    A   F  M  S + P+ I+ ++ +S  +    +  L+    H YV + G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNG 369

Query: 169 LDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLF 228
            +  +  +  AL+DMY KC   D+A   FD +S K  V+WN+++ GY+ NG+VD A + F
Sbjct: 370 FESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 429

Query: 229 DEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLS-GVESDYVTIIAVLSACANLGAL 288
           + MP K+ +SW  +I G V+  L EEA+E F  MQ   GV +D VT++++ SAC +LGAL
Sbjct: 430 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 489

Query: 289 SLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGF 348
            L  WI  ++     + ++RL  TL++M+SRCG  + A  IF  + +R + +W   IG  
Sbjct: 490 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 549

Query: 349 AMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPR 408
           AM G  E A+ LFD M  +G KPDGV+F GALTACSH GLV QG E F  M  +H +SP 
Sbjct: 550 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 609

Query: 409 IEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLV 468
             HYGC+VDL  RAG LE+A+ +I++MPM+PN+V+  SLLAACR  G++ +A    + + 
Sbjct: 610 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQ 669

Query: 469 ELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGD 528
            L P    +YV+L+N+YA+ G W    KVR +M+ +G++K PG SSI+I G  HEF +GD
Sbjct: 670 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGD 729

Query: 529 KSHSQTDSIYEILELLSYELENYGYI 554
           +SH +  +I  +L+ +S    + G++
Sbjct: 730 ESHPEMPNIEAMLDEVSQRASHLGHV 752

[Close]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 358.2 bits (918), Expect = 9.100e-99
Identity = 170/453 (37.53%), Postives = 281/453 (62.03%), Query Frame = 1

		  
Query: 101 IVPWTSAIARHCKNGNISHAFKEFTRMRFSDIHPNHITFITLLSGIAHYPSQGRLFAAPL 160
           +V W S I    + G+   A + F +M   D+  +H+T + +LS  A    +   F   +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI--RNLEFGRQV 256

Query: 161 HAYVCKMGLDRPNVKVGTALVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGK 220
            +Y+ +  ++  N+ +  A++DMY+KCG ++ A+  FD + EK++V+W TM+DGY  +  
Sbjct: 257 CSYIEENRVN-VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 316

Query: 221 VDHALQLFDEMPVKDAISWTALIGGFVKKGLDEEALECFFEMQLS-GVESDYVTIIAVLS 280
            + A ++ + MP KD ++W ALI  + + G   EAL  F E+QL   ++ + +T+++ LS
Sbjct: 317 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 376

Query: 281 ACANLGALSLGLWINRFVMGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVS 340
           ACA +GAL LG WI+ ++     R N  + + L+ MYS+CG ++ +RE+F  +  R +  
Sbjct: 377 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 436

Query: 341 WNTMIGGFAMNGLVEEALILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQ 400
           W+ MIGG AM+G   EA+ +F +MQ    KP+GV+FT    ACSH GLVD+    F  M+
Sbjct: 437 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 496

Query: 401 NVHNLSPRIEHYGCLVDLYSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLA 460
           + + + P  +HY C+VD+  R+G LE A+  I+ MP+ P+  V G+LL AC+   ++NLA
Sbjct: 497 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 556

Query: 461 EVVMKFLVELDPSSDSNYVMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGG 520
           E+    L+EL+P +D  +V+L+N+YA +G WE   ++R++MR  G++K PG SSIEI+G 
Sbjct: 557 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 616

Query: 521 IHEFMAGDKSHSQTDSIYEILELLSYELENYGY 553
           IHEF++GD +H  ++ +Y  L  +  +L++ GY
Sbjct: 617 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646

[Close]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 348.6 bits (893), Expect = 7.200e-96
Identity = 157/363 (43.25%), Postives = 248/363 (68.32%), Query Frame = 1

		  
Query: 180 LVDMYSKCGFVDSARLCFDDISEKNSVSWNTMIDGYMRNGKVDHALQLFDEMPV--KDAI 239
           ++D Y++C  +  A   F+ + E+N+VSW+TM+ GY + G ++ A  +FD+MP+  K+ +
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281

Query: 240 SWTALIGGFVKKGLDEEALECFFEMQLSGVESDYVTIIAVLSACANLGALSLGLWINRFV 299
           +WT +I G+ +KGL +EA     +M  SG++ D   +I++L+AC   G LSLG+ I+  +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341

Query: 300 MGKYFRDNIRLCNTLLEMYSRCGRVDFAREIFEKMPSRTLVSWNTMIGGFAMNGLVEEAL 359
                  N  + N LL+MY++CG +  A ++F  +P + LVSWNTM+ G  ++G  +EA+
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAI 401

Query: 360 ILFDRMQREGFKPDGVSFTGALTACSHAGLVDQGLEYFDGMQNVHNLSPRIEHYGCLVDL 419
            LF RM+REG +PD V+F   L +C+HAGL+D+G++YF  M+ V++L P++EHYGCLVDL
Sbjct: 402 ELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDL 461

Query: 420 YSRAGRLEDALSVIKNMPMKPNEVVLGSLLAACRNCGDINLAEVVMKFLVELDPSSDSNY 479
             R GRL++A+ V++ MPM+PN V+ G+LL ACR   ++++A+ V+  LV+LDP    NY
Sbjct: 462 LGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNY 521

Query: 480 VMLANMYAAVGSWEGAGKVRRNMRTRGIQKRPGISSIEIEGGIHEFMAGDKSHSQTDSIY 539
            +L+N+YAA   WEG   +R  M++ G++K  G SS+E+E GIHEF   DKSH ++D IY
Sbjct: 522 SLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581

Query: 540 EIL 541
           ++L
Sbjct: 582 QML 584

The following BLAST results are available for this feature:

BLAST of Spo13119.1 vs. NCBI nr
BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
BLAST of Spo13119.1 vs. TAIR (Arabidopsis)

BLAST of Spo13119.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902085173\|gb\|KNA03178.1\|	4.0e-306	99.8	hypothetical protein SOVF_2116...	[more]
gi\|731348308\|ref\|XP_010685430.1\|	5.3e-234	78.9	PREDICTED: pentatricopeptide r...	[more]
gi\|1009113399\|ref\|XP_015873124.1\|	1.2e-190	63.0	PREDICTED: pentatricopeptide r...	[more]
gi\|694399333\|ref\|XP_009374796.1\|	2.2e-187	61.5	PREDICTED: pentatricopeptide r...	[more]
gi\|694391988\|ref\|XP_009371490.1\|	2.9e-187	61.5	PREDICTED: pentatricopeptide r...	[more]

BLAST of Spo13119.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9Q919_SPIOL	2.8e-306	99.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8BY94_BETVU	3.7e-234	78.9	Uncharacterized protein OS=Bet...	[more]
A0A067F459_CITSI	2.2e-186	63.0	Uncharacterized protein OS=Cit...	[more]
A0A061GV80_THECC	4.2e-185	62.9	Tetratricopeptide repeat (TPR)...	[more]
F6HAB7_VITVI	2.5e-182	61.3	Putative uncharacterized prote...	[more]

BLAST of Spo13119.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
PPR13_ARATH	2.4e-157	57.4	Pentatricopeptide repeat-conta...	[more]
PP354_ARATH	2.0e-100	40.4	Pentatricopeptide repeat-conta...	[more]
PP249_ARATH	3.8e-99	40.8	Pentatricopeptide repeat-conta...	[more]
PP175_ARATH	1.6e-97	37.5	Pentatricopeptide repeat-conta...	[more]
PP261_ARATH	1.3e-94	43.2	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo13119.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G05750.1	1.3e-158	57.4	Tetratricopeptide repeat (TPR)...	[more]
AT4G37380.1	1.1e-101	40.4	Tetratricopeptide repeat (TPR)...	[more]
AT3G22690.1	2.2e-100	40.8	Protein of unknown function DU...	[more]
AT2G29760.1	9.1e-99	37.5	Tetratricopeptide repeat (TPR)...	[more]
AT3G29230.1	7.2e-96	43.2	Tetratricopeptide repeat (TPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 206..232 score: 4.7E-10coord: 410..435 score: 0.002coord: 237..267 score: 5.8E-7coord: 178..204 score: 0.24coord: 309..335 score: 2.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 337..382 score: 5.2E-12coord: 102..147 score: 1.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 206..232 score: 4.3E-9coord: 308..335 score: 2.2E-4coord: 237..269 score: 1.6E-5coord: 411..434 score: 0.0016coord: 338..371 score: 4.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 305..335 score: 9.821coord: 100..134 score: 8.407coord: 336..370 score: 13.044coord: 173..203 score: 6.588coord: 473..507 score: 7.585coord: 239..269 score: 7.3coord: 204..238 score: 12.057coord: 371..401 score: 6.807coord: 407..441 score: 8
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 402..493 score: 5.5E-8coord: 182..332 score: 5.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 379..496 score: 3.32E-6coord: 299..342 score: 3.32E-6coord: 178..231 score: 3.3
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 100..514 score: 1.2E
None	No IPR available	PANTHER	PTHR24015:SF778	SUBFAMILY NOT NAMED	coord: 100..514 score: 1.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0007049	cell cycle
biological_process	GO:0030154	cell differentiation
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0019877	diaminopimelate biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0048598	embryonic morphogenesis
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006412	translation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009651	response to salt stress
biological_process	GO:0010157	response to chlorate
biological_process	GO:0045037	protein import into chloroplast stroma
biological_process	GO:0006457	protein folding
biological_process	GO:0009250	glucan biosynthetic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009704	de-etiolation
biological_process	GO:0009553	embryo sac development
biological_process	GO:0051301	cell division
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009637	response to blue light
biological_process	GO:0034969	histone arginine methylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0051604	protein maturation
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0022618	ribonucleoprotein complex assembly
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006414	translational elongation
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0051258	protein polymerization
biological_process	GO:0034414	tRNA 3'-trailer cleavage, endonucleolytic
biological_process	GO:0016556	mRNA modification
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0006406	mRNA export from nucleus
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0010006	Toc complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031359	integral component of chloroplast outer membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009536	plastid
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0017177	glucosidase II complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0042781	3'-tRNA processing endoribonuclease activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase
molecular_function	GO:0070402	NADPH binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004558	alpha-1,4-glucosidase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0032450	maltose alpha-glucosidase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0043169	cation binding
molecular_function	GO:0008469	histone-arginine N-methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06162	0.77	Barchart \| Table
Spo21557	0.76	Barchart \| Table
Spo20515	0.75	Barchart \| Table
Spo07313	0.75	Barchart \| Table
Spo19799	0.73	Barchart \| Table
Spo21207	0.73	Barchart \| Table
Spo18860	0.72	Barchart \| Table
Spo27100	0.72	Barchart \| Table
Spo08998	0.72	Barchart \| Table
Spo15815	0.71	Barchart \| Table
Spo13241	0.71	Barchart \| Table
Spo00221	0.70	Barchart \| Table
Spo04497	0.70	Barchart \| Table
Spo08165	0.70	Barchart \| Table
Spo10702	0.70	Barchart \| Table
Spo14884	0.70	Barchart \| Table
Spo15235	0.70	Barchart \| Table
Spo15631	0.70	Barchart \| Table
Spo15841	0.70	Barchart \| Table
Spo25123	0.70	Barchart \| Table
Spo19650	0.69	Barchart \| Table
Spo18937	0.69	Barchart \| Table
Spo17513	0.69	Barchart \| Table
Spo23227	0.69	Barchart \| Table
Spo24750	0.69	Barchart \| Table
Spo22456	0.69	Barchart \| Table
Spo22912	0.69	Barchart \| Table
Spo02922	0.69	Barchart \| Table
Spo14323	0.68	Barchart \| Table
Spo22578	0.68	Barchart \| Table
Spo14858	0.68	Barchart \| Table
Spo23978	0.68	Barchart \| Table
Spo20896	0.68	Barchart \| Table
Spo12610	0.67	Barchart \| Table
Spo11184	0.67	Barchart \| Table
Spo09493	0.67	Barchart \| Table
Spo12861	0.67	Barchart \| Table
Spo13118	0.67	Barchart \| Table
Spo05190	0.67	Barchart \| Table
Spo13732	0.67	Barchart \| Table
Spo14451	0.67	Barchart \| Table
Spo14823	0.67	Barchart \| Table
Spo00504	0.67	Barchart \| Table
Spo25481	0.67	Barchart \| Table
Spo18479	0.67	Barchart \| Table
Spo03413	0.67	Barchart \| Table
Spo19098	0.67	Barchart \| Table
Spo19776	0.67	Barchart \| Table
Spo22610	0.67	Barchart \| Table
Spo05946	0.67	Barchart \| Table
Spo17065	0.66	Barchart \| Table
Spo19640	0.66	Barchart \| Table
Spo26249	0.66	Barchart \| Table
Spo24875	0.66	Barchart \| Table
Spo13061	0.66	Barchart \| Table
Spo11072	0.66	Barchart \| Table
Spo09959	0.66	Barchart \| Table
Spo09701	0.66	Barchart \| Table
Spo06493	0.66	Barchart \| Table
Spo09208	0.66	Barchart \| Table
Spo18598	0.66	Barchart \| Table
Spo02931	0.66	Barchart \| Table
Spo20699	0.66	Barchart \| Table
Spo15635	0.66	Barchart \| Table
Spo02271	0.66	Barchart \| Table
Spo08285	0.65	Barchart \| Table
Spo24415	0.65	Barchart \| Table
Spo04501	0.65	Barchart \| Table
Spo05577	0.65	Barchart \| Table
Spo17461	0.65	Barchart \| Table
Spo17114	0.65	Barchart \| Table
Spo00920	0.65	Barchart \| Table
Spo07734	0.65	Barchart \| Table