Spo13950 (gene) | SpinachBase

Overview


Name	Spo13950
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaC04g30840D protein
Location	SpoScf_02153 : 83389 .. 85607 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAAGCATTGCGGTCTGGGGAGGAGGACTCTCCATGAATGCAGGAGTGGAAGAACAAAGAATCATTGCAGAGTCAAGAAGAACAAAAGAAATCCTCCTGATGGAAGGAATTGCGATCTTAAGGTGTGAGAGTAATCGTCGGAATTTTTAATTATGGTTGGAGTGCTTGTTGCTGGAAGGAAGGAAGGAAGAAGGCGAAATTTGCTCGAGTGTTTTCTTCGTTTACAAAAACATAAAATAGTAGAACCGCAAATGTGGTTAGCGGTTTTCTTATCAACAAATAAAAAAATAAAAAATTCAATTCCGATCCTACGTGAACAGTATGATGGGAATTAGTTTTCAAAACAATGCAAACGAGGAATATATTTCCATTTAAACAATATTTACGGAAATCGTTCAATAATTCAAAATCATCTCAAAAAAAAAAATTAAATTGGAGACCATAATAGAAGAGGATTTTTATTCGACGCCCTATTCAGTTAAAAGCGCCCCAAATTTTTACGTGAAAGTACGATCTTACCCTTTAAAATTAAATGGACCCCCTCCCTCATCACCCTTTCCTCCTTCTCTGCTCCTTCCCTCTCTCCCTTCCTTCTTCCTCCGGCAGCCTAGCAGTTGCGCCGGCACCACCTCAACCGATCTTCGGTCGGGTTTGTTCAACCTTTTTCTCGCTGCCCACCTTCTTTTTTTTTATTATTATTATTGTTGTACTATTTTTGTTTATATTATTTAATTTTTGTAGATTTTATATTTTTCGATTTAATTTGTTTTATTTTTATTATTTAATTTTCTGTTTTTATTTTGATTGTTCAATATAATTATTTTAGTTGATTATAATTTATTATGTTAACGAAAAATCGAATATAATCCGCATATTTATTTTTCACGAAAATTTTAAATATACATCATAATTTCTAGAAATTTCTAAAATAAATAAAAATTAAATTAACAAATTATAATATAAATTTGAATAAACTTTACGTTAAAAAAAAAAAAAATTGAATTTCAAATATGCTTCCCGCGCACAGAATTTGCATGGTGGTCATGGAAGTGGCGCACGGACTTTGCATGGTGGACATGGGAGCACGGAATTTGCATAGCTCCCATGTCCACGACGCAAATTATGTGCGCCACTTCCATGTCTTCCGTGCACAGAATTTGCGCCATGGACATGGGAGCCATGCAAATTCCGTGCACCACTCCCATGTCCACCATGCAAAGTCCGTGCTCCACTTCCATGACCACCATGCAAAGTCCGTGCTCGAGAAATGAATAGTAAAAATAAATTAAAAAAAACTCCATTTTTACCTCCTCCATTGATGCTTGTTCACGATATTCCGGCGAACTACTTCCACGACTTACACCATTATGTGAGCTCCCCCTCCAGCTTCTTTGATGAATTATGAATAAAGTAACGTTGTCAACAACTTTTTTCGGCGAGATTACGAGTTCGATACCATAATGAGTTAAAGAGAAAAAAAATTGCTCGCCGAAATTTAATTTTTCGGTAAGTACCGAGACACCGGGCTGGAGGGGAGGGGGGTTGAGAGAAAGGTGAGGTAAAAAGGGTAAAAAAAATGAATGGAGGGGGTAAGTTTTTATAAGGGCAATTTTGTATTTTCACTATAAATAATAAGACGATTTTAGCGTAGGCGGACGTCAAATAACGATACAGTGATAGAAACATCAACGAATACAATGTGACACAGACTCTGGCCCCACCCGAGTCCCAAATAATCTTGGTGGATAGACCACAAAGGAGGAGGACGATTAACCTAAGACCAAGGAACACCCGAAGTGGTGGCGGACGGCGGACGGCGGACGGCAAGGAAGCTCGAGACGGAGGAGAGATGTCGGATAACCCATACGAGCGAGTGAAAGGAGGACGCTTAAGTTTCAAAGGCGGAGAATTAGCAAGCCGAAGCAAAGCCATCGACAAAAAGAAAAAGAAGAAGAAAAGCAAACATGAAGAAATTCAACAACAACAACAAGCTGGTATTATTCTCGAAGAACAACAACAGCCCACAACTACTCTTGATACTGATTCTGGAGAAGTTGTTTATACGATTGATGCTGCGAGGAAGATGAAATATGATGATCTTTTTCCTGTCGAGGCTAAAAAATTTGGGTATGATCCTGTTGCTGCTAAATCCAAATCTATTGAAGAAGCTCTTGATGATCGTGTCAAGAAGAAGGCTGATCGCTATTGTAAATAG

mRNA sequence

ATGCCGAAGCATTGCGGTCTGGGGAGGAGGACTCTCCATGAATGCAGGAGTGGAAGAACAAAGAATCATTGCAGAGTCAAGAAGAACAAAAGAAATCCTCCTGATGGAAGGAATTGCGATCTTAAGACTCTGGCCCCACCCGAGTCCCAAATAATCTTGGTGGATAGACCACAAAGGAGGAGGACGATTAACCTAAGACCAAGGAACACCCGAAGTGGTGGCGGACGGCGGACGGCGGACGGCAAGGAAGCTCGAGACGGAGGAGAGATGTCGGATAACCCATACGAGCGAGTGAAAGGAGGACGCTTAAGTTTCAAAGGCGGAGAATTAGCAAGCCGAAGCAAAGCCATCGACAAAAAGAAAAAGAAGAAGAAAAGCAAACATGAAGAAATTCAACAACAACAACAAGCTGGTATTATTCTCGAAGAACAACAACAGCCCACAACTACTCTTGATACTGATTCTGGAGAAGTTGTTTATACGATTGATGCTGCGAGGAAGATGAAATATGATGATCTTTTTCCTGTCGAGGCTAAAAAATTTGGGTATGATCCTGTTGCTGCTAAATCCAAATCTATTGAAGAAGCTCTTGATGATCGTGTCAAGAAGAAGGCTGATCGCTATTGTAAATAG

Coding sequence (CDS)

ATGCCGAAGCATTGCGGTCTGGGGAGGAGGACTCTCCATGAATGCAGGAGTGGAAGAACAAAGAATCATTGCAGAGTCAAGAAGAACAAAAGAAATCCTCCTGATGGAAGGAATTGCGATCTTAAGACTCTGGCCCCACCCGAGTCCCAAATAATCTTGGTGGATAGACCACAAAGGAGGAGGACGATTAACCTAAGACCAAGGAACACCCGAAGTGGTGGCGGACGGCGGACGGCGGACGGCAAGGAAGCTCGAGACGGAGGAGAGATGTCGGATAACCCATACGAGCGAGTGAAAGGAGGACGCTTAAGTTTCAAAGGCGGAGAATTAGCAAGCCGAAGCAAAGCCATCGACAAAAAGAAAAAGAAGAAGAAAAGCAAACATGAAGAAATTCAACAACAACAACAAGCTGGTATTATTCTCGAAGAACAACAACAGCCCACAACTACTCTTGATACTGATTCTGGAGAAGTTGTTTATACGATTGATGCTGCGAGGAAGATGAAATATGATGATCTTTTTCCTGTCGAGGCTAAAAAATTTGGGTATGATCCTGTTGCTGCTAAATCCAAATCTATTGAAGAAGCTCTTGATGATCGTGTCAAGAAGAAGGCTGATCGCTATTGTAAATAG

Protein sequence

MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRNCDLKTLAPPESQIILVDRPQRRRTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKADRYCK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13950.1	Spo13950.1	mRNA

Homology

[Close]

BLAST of Spo13950.1 vs. NCBI nr
Match: gi|902159838|gb|KNA06357.1| (hypothetical protein SOVF_181740 [Spinacia oleracea])

HSP 1 Score: 405.2 bits (1040), Expect = 6.900e-110
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 1


		  
Query: 1   MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRNCDLKTLAPPESQIILVDRPQRR 60
           MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRN DLKTLAPPESQIILVDRPQRR
Sbjct: 1   MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRNGDLKTLAPPESQIILVDRPQRR 60

Query: 61  RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK 120
           RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK
Sbjct: 61  RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK 120

Query: 121 KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK 180
           KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK
Sbjct: 121 KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK 180

Query: 181 FGYDPVAAKSKSIEEALDDRVKKKADRYCK 211
           FGYDPVAAKSKSIEEALDDRVKKKADRYCK
Sbjct: 181 FGYDPVAAKSKSIEEALDDRVKKKADRYCK 210

[Close]

BLAST of Spo13950.1 vs. NCBI nr
Match: gi|731351806|ref|XP_010687221.1| (PREDICTED: uncharacterized protein LOC104901356 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 151.4 bits (381), Expect = 1.800e-33
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSK---HEEIQQQQQAGIILEEQQQ 149
           MSDNPYERVKGGRL+FKGG LAS SK+IDKK++KKK+K    E     QQ   +L+E  Q
Sbjct: 1   MSDNPYERVKGGRLTFKGGVLASSSKSIDKKRRKKKNKDKNKESDDNHQQEADVLDE--Q 60

Query: 150 PTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKAD 209
           P T   T+SG+ VYTIDAA+KMKY+DLFPVEAKKFGYDP   KSKS++EALDDRVKKKAD
Sbjct: 61  PITL--TESGDPVYTIDAAKKMKYEDLFPVEAKKFGYDP-KVKSKSVQEALDDRVKKKAD 119

Query: 210 RYCK 211
           RYCK
Sbjct: 121 RYCK 119

[Close]

BLAST of Spo13950.1 vs. NCBI nr
Match: gi|848915755|ref|XP_012855569.1| (PREDICTED: uncharacterized protein LOC105974953 [Erythranthe guttata])

HSP 1 Score: 135.2 bits (339), Expect = 1.300e-28
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 1


		  
Query: 95  YERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTD 154
           YERV+GGRL+FKGGELA+R KAIDK KKKKK K+ + +    A +     + P+ ++  +
Sbjct: 5   YERVRGGRLAFKGGELATREKAIDKNKKKKKKKNNKNKLADDAVLA----EDPSVSVVEE 64

Query: 155 SGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKADRYCK 211
           SG  VYTIDAA+KMKYD+LFPVE KKF YDP  AK KS+EEALDDRVKKKADRYCK
Sbjct: 65  SGSDVYTIDAAKKMKYDELFPVECKKFAYDP-NAKKKSVEEALDDRVKKKADRYCK 115

[Close]

BLAST of Spo13950.1 vs. NCBI nr
Match: gi|460379283|ref|XP_004235393.1| (PREDICTED: uncharacterized protein LOC101256751 [Solanum lycopersicum])

HSP 1 Score: 134.0 bits (336), Expect = 3.000e-28
Identity = 83/126 (65.87%), Postives = 95/126 (75.40%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKH-EEIQQQQ----QAGIILEEQ 149
           MSD PYERV GGRL FKGG +ASRSKAIDKKKKKKK+K  E+I   +     A +   EQ
Sbjct: 1   MSD-PYERVTGGRLMFKGGAVASRSKAIDKKKKKKKNKSAEDIVSDEPLTGDAALAATEQ 60

Query: 150 QQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKK 209
           Q        D+ E ++TIDAA++ KYDDLFPVEAKKFGYDP  AK+KS+EEALDDRVKKK
Sbjct: 61  Q-------ADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDP-NAKAKSVEEALDDRVKKK 117

Query: 210 ADRYCK 211
           ADRYCK
Sbjct: 121 ADRYCK 117

[Close]

BLAST of Spo13950.1 vs. NCBI nr
Match: gi|53749476|gb|AAU90329.1| (hypothetical protein SDM1_56t00007 [Solanum demissum])

HSP 1 Score: 134.0 bits (336), Expect = 3.000e-28
Identity = 81/126 (64.29%), Postives = 94/126 (74.60%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQ-----AGIILEEQ 149
           MSD PYERV GGRL FKGG +ASRSKAIDKKKKKKK+K  E     +     A ++  EQ
Sbjct: 1   MSD-PYERVTGGRLMFKGGAVASRSKAIDKKKKKKKNKSAEDVVSDEPLTGDAALVATEQ 60

Query: 150 QQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKK 209
           Q        D+ E ++TIDAA++ KYDDLFPVEAKKFGYDP  AK+KS+E+ALDDRVKKK
Sbjct: 61  Q-------ADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDP-NAKAKSVEDALDDRVKKK 117

Query: 210 ADRYCK 211
           ADRYCK
Sbjct: 121 ADRYCK 117

[Close]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGF6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181740 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 4.800e-110
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 1


		  
Query: 1   MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRNCDLKTLAPPESQIILVDRPQRR 60
           MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRN DLKTLAPPESQIILVDRPQRR
Sbjct: 1   MPKHCGLGRRTLHECRSGRTKNHCRVKKNKRNPPDGRNGDLKTLAPPESQIILVDRPQRR 60

Query: 61  RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK 120
           RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK
Sbjct: 61  RTINLRPRNTRSGGGRRTADGKEARDGGEMSDNPYERVKGGRLSFKGGELASRSKAIDKK 120

Query: 121 KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK 180
           KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK
Sbjct: 121 KKKKKSKHEEIQQQQQAGIILEEQQQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKK 180

Query: 181 FGYDPVAAKSKSIEEALDDRVKKKADRYCK 211
           FGYDPVAAKSKSIEEALDDRVKKKADRYCK
Sbjct: 181 FGYDPVAAKSKSIEEALDDRVKKKADRYCK 210

[Close]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BR80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g188480 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.200e-33
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSK---HEEIQQQQQAGIILEEQQQ 149
           MSDNPYERVKGGRL+FKGG LAS SK+IDKK++KKK+K    E     QQ   +L+E  Q
Sbjct: 1   MSDNPYERVKGGRLTFKGGVLASSSKSIDKKRRKKKNKDKNKESDDNHQQEADVLDE--Q 60

Query: 150 PTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKAD 209
           P T   T+SG+ VYTIDAA+KMKY+DLFPVEAKKFGYDP   KSKS++EALDDRVKKKAD
Sbjct: 61  PITL--TESGDPVYTIDAAKKMKYEDLFPVEAKKFGYDP-KVKSKSVQEALDDRVKKKAD 119

Query: 210 RYCK 211
           RYCK
Sbjct: 121 RYCK 119

[Close]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Match: Q60D17_SOLDE (Putative uncharacterized protein OS=Solanum demissum GN=SDM1_56t00007 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.100e-28
Identity = 81/126 (64.29%), Postives = 94/126 (74.60%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQ-----AGIILEEQ 149
           MSD PYERV GGRL FKGG +ASRSKAIDKKKKKKK+K  E     +     A ++  EQ
Sbjct: 1   MSD-PYERVTGGRLMFKGGAVASRSKAIDKKKKKKKNKSAEDVVSDEPLTGDAALVATEQ 60

Query: 150 QQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKK 209
           Q        D+ E ++TIDAA++ KYDDLFPVEAKKFGYDP  AK+KS+E+ALDDRVKKK
Sbjct: 61  Q-------ADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDP-NAKAKSVEDALDDRVKKK 117

Query: 210 ADRYCK 211
           ADRYCK
Sbjct: 121 ADRYCK 117

[Close]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Match: K4BJQ6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.100e-28
Identity = 83/126 (65.87%), Postives = 95/126 (75.40%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKH-EEIQQQQ----QAGIILEEQ 149
           MSD PYERV GGRL FKGG +ASRSKAIDKKKKKKK+K  E+I   +     A +   EQ
Sbjct: 1   MSD-PYERVTGGRLMFKGGAVASRSKAIDKKKKKKKNKSAEDIVSDEPLTGDAALAATEQ 60

Query: 150 QQPTTTLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKK 209
           Q        D+ E ++TIDAA++ KYDDLFPVEAKKFGYDP  AK+KS+EEALDDRVKKK
Sbjct: 61  Q-------ADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDP-NAKAKSVEEALDDRVKKK 117

Query: 210 ADRYCK 211
           ADRYCK
Sbjct: 121 ADRYCK 117

[Close]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Match: M1AN11_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010159 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.300e-27
Identity = 78/121 (64.46%), Postives = 91/121 (75.21%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQAGIILEEQQQPTT 149
           MSD PYERV GGRL FKGG +ASRSKAIDKKKKKKK+K  E     +   +  +     T
Sbjct: 1   MSD-PYERVTGGRLMFKGGAVASRSKAIDKKKKKKKNKSAEDVVSDEP--LTGDAALAAT 60

Query: 150 TLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKADRYC 209
               D+ E ++TIDAA++ KYDDLFPVEAKKFGYDP  AK+KS+E+ALDDRVKKKADRYC
Sbjct: 61  EQQADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDP-NAKAKSVEDALDDRVKKKADRYC 117

Query: 210 K 211
           K
Sbjct: 121 K 117

[Close]

BLAST of Spo13950.1 vs. TAIR (Arabidopsis)
Match: AT2G25720.1 (unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.600e-26
Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 1


		  
Query: 90  MSDNPYERVKGGRLSFKGGELASRSKAIDKKKKKKKSKHEEIQQQQQAGIILEEQQQPTT 149
           MSD PYERV GGRL+FKGG+LA+R K+I+KKKKKK+ K++E     + G        P  
Sbjct: 1   MSD-PYERVNGGRLAFKGGDLATR-KSIEKKKKKKQKKNKEKLDGVEDGAKTAPDGSPPP 60

Query: 150 TLDTDSGEVVYTIDAARKMKYDDLFPVEAKKFGYDPVAAKSKSIEEALDDRVKKKADRYC 209
                  E +Y+IDAA+K KYDDLFPVEAKKFGY P  A  +S E+ALDDRVKKKADRYC
Sbjct: 61  AA-AAGDEDIYSIDAAKKKKYDDLFPVEAKKFGYIP-KANFESREDALDDRVKKKADRYC 117

Query: 210 K 211
           K
Sbjct: 121 K 117

The following BLAST results are available for this feature:

BLAST of Spo13950.1 vs. NCBI nr
BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
BLAST of Spo13950.1 vs. ExPASy Swiss-Prot
BLAST of Spo13950.1 vs. TAIR (Arabidopsis)

BLAST of Spo13950.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902159838\|gb\|KNA06357.1\|	6.9e-110	99.5	hypothetical protein SOVF_1817...	[more]
gi\|731351806\|ref\|XP_010687221.1\|	1.8e-33	70.1	PREDICTED: uncharacterized pro...	[more]
gi\|848915755\|ref\|XP_012855569.1\|	1.3e-28	64.6	PREDICTED: uncharacterized pro...	[more]
gi\|460379283\|ref\|XP_004235393.1\|	3.0e-28	65.8	PREDICTED: uncharacterized pro...	[more]
gi\|53749476\|gb\|AAU90329.1\|	3.0e-28	64.2	hypothetical protein SDM1_56t0...	[more]

BLAST of Spo13950.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QGF6_SPIOL	4.8e-110	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8BR80_BETVU	1.2e-33	70.1	Uncharacterized protein OS=Bet...	[more]
Q60D17_SOLDE	2.1e-28	64.2	Putative uncharacterized prote...	[more]
K4BJQ6_SOLLC	2.1e-28	65.8	Uncharacterized protein OS=Sol...	[more]
M1AN11_SOLTU	1.3e-27	64.4	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo13950.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13950.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G25720.1	8.6e-26	59.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013865	Protein of unknown function DUF1754, eukaryotic	PANTHER	PTHR13282	UNCHARACTERIZED	coord: 90..209 score: 5.9
None	No IPR available	unknown	Coil	Coil	coord: 117..137 scor
None	No IPR available	PANTHER	PTHR13282:SF7	SUBFAMILY NOT NAMED	coord: 90..209 score: 5.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016020	membrane
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14403	0.68	Barchart \| Table
Spo21833	0.68	Barchart \| Table
Spo11688	0.67	Barchart \| Table
Spo02648	0.66	Barchart \| Table
Spo07913	0.66	Barchart \| Table
Spo23382	0.65	Barchart \| Table