Spo18644 (gene) | SpinachBase

Overview


Name	Spo18644
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Polypyrimidine tract-binding protein 3
Location	SpoScf_02285 : 36818 .. 46679 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATGTGAGTCTCTGACAATCAACTAATTTAGCACCAAGCCACCAATCTACTAGTATACAAAACGTTCAACAACCAATTACTAAATGAGACCTATTTTTCTTTATTCACATACTAGAGGCGGATCTTGGGTGTATCTTAAAGAGACTAGACCCCACTACAAATTTTATCAAAGCATTTTCAATTCCAACCCTTAATAAATTTTGAGTAAAATTGTACAAATCTCATACTGAATTGTCTAACTCTTGTACTACGGATCTTATTAACGTTATATTAAAAAAAAGTAAAATTATTTGACATCCGTCATAACTATTTATCTTCTCTCTAACTACCGTACTACATCCGTTTCGAAATAATGAGAATGGTTTCCATAGGTAGGTGTTTCAAAATAATAAAGACACTCTACTTTAATCTATTTTTGGTTAGGTGACTCGTCATATTTAATGTATTCACACCCATCTTTTTCCCACTTTACTTACAACATTCCACTCAATTTATTTTTATATAATTTTTTACTCATAACTTTTCACACAACCTATTTTTTTTATTTTTTTTTACACCATTTCACTCAACCTAATTTTTATTATTATTTTATTACAAAATTCCATTTTTCCATATTTATTTCTTACTTTTCAATCATTTATCATAATTTTTGTAATTTGTGTAAGTTTTCTCATTATTTCGAACGGAAGGAGCATAAGATTATAAGACAAAGTATGCGTCAAATTGAAATTACAATCTGATAGGTGGAGACAGAATGAAGTGTTTGAGCAGCTTTTCTTTGTGCCCTTTATGACGTTTTGTTGGATCATGAGTGCTTAATTAGGTTAAATTAGTACGAGTACTTCAAAATTGGAGGAAAATACCAAAAAAATTAACAAAAAGAAAAATTAAAAAAAATAAATCATTTCACTTTTTTTTTTTAACAAACTCTCGATTCGTATCGTAGGGCTTCCATCCCTTTCTTGTTCTTCTGCTTCTTCACCCTCGCATCCTCCTTTCTTTTAACATCTCTTTCAATCTTCTCCATTTTTCTCTCTCCTATTAAGCTTCACTGTGAGTCCTTTCTCCTAATTATTATCACTTTCTTCATTATTTTTTATTTTTAGGGTGGTTGTTTTATGGGTTCTTGTTAATTTGATTAATTTTTTAATCCTTCTGGTGTTTTGGGTTTGTTGCTAATGCATCTGATTTCAATTTTTTTTTGGTGGGTTGCTTTTATGACGTTATTTATGGGGAATGATTCAATTTTATTTTATTTTTCTCCTTTTCGTGTATGTGGGTTTTACAAATGTGATGTTTTGTGTGATTGCAGGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGGTAACACTCATTGGTTGTTTTACTTATTTATTTGATTAATTTTATGGAGGTTAGTGTATGTTGATTGCATATTAATGGAATTTTACAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGTTTTCCTCTTATTTTACCCTCATTGTTATGTTATGGGGTATGTTATCTATGTGTTGAAATTTAGGTAGACAATATAGTCACTTACCGAGACTGTCTTACAGTAATTTATTGCGATACATTAAATATTTTGTCACTGTCCTTTAATACCGGATTTTGTCATACTTAGTATGATATTGATTCTCCTCGAGTGTCAATTTAGTTACTTGAATGATCAAGGATGACCACCTACCTTCTCAGGTTCCCTTATATGTGGGTGGTGGGTGGTGGCTGGTGGGTTTCATTCACAGTATTCACACTTTCTTTCAAGGCACTAAGAATTTGAAAGTATATTCTTTGTGTTGTAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGTATTGTCCTTGTTGGCTCATATCTGTTGATTTCCTTCTTTTTACCCCCACCTATTCACTCATTTTGTTGTGATTTCTGAGGCGTTACCATTTGGTGAACCTTTGATGATCCATAAGTTTAATTATTTGGTTAACTTCTTGATGGTTGCTAACTACTGCTAGTTGAGTAAAATGTTTCAGTAATTGGTTGCAATAGGCCATGTTGTTCATTAATGCTAGTACTATAGGTGTATTGCCTGCAGTTCCTTTTGATTTTGATTACTTCGGTTTTCCAATTTGCAGACAATTTTCTGGTTTTTGCAACGTAGAGTCCTAAAGTTATTATTTTGCTTAATATTTGCATTGGGAATGGTTTAATTCTGCATAAAGATGTTGATAAAAGTAACTCAAAAGCAAGATGACTAAATAAGAAACATAGAAGGCTTAGTAAACTGTATAGATTTTCTTTTTATTGCGAAGTAGCAAAATGGCCATAACTTTAATCAAAAGTCTATTCAAAACAGCTTCTATATTAAGTAGTTGTAAGGTTGCATACACTTAACTCACCCCACCATTTCCGAGAGGCTCAAGTCAACAAGTTGTTGATATTGTTGCCTGTGTAATATATTCTGTGGTGGTTGTGTTTTGTTGAGCTTGAGCTTGAGCTTGTTTTCTGAGTAAGCAGAAGAAACTGGACAGAGGCTTCTATGACTCTGGGATTTCATCAATGCAAAAATTGGGTTAACAGCTATTTGAAGTTGTTTTTGTCCTGATGAACAAAAGAAAGTGATACAGAATGCCAAGTGTAATAGCCATTGTTGATTGTTCCAAAAGGAAAACTTTAGTTCTTCTAACAGTCATGTGGCTTTAAAAACTAAAAATCAATATACATAGAAGTTCACTATGATTTGTTTCTCAGTGTTAAATAGACATTGGGCTGATGTGATGTTGCTGATGTGCCGAGCTTGGGTATGTTCTCTGAAGCACCACAAAGAGGCTTGAGCACTCTCTTCTCTCTGTTTTAAGAAATCTTTCTTACTTACAAAGGCAGAACCTATTTTGTTTCCTGTTGTTACTGTCTTCTACATTTCCTACTTTCAGCATTAAATTTTCCATCTGCTGTCCTTGAGTTTGCCCTCTTTTGTTTGCTACCTTGTGGAGTCTAGTTTTCTAATTTACCATATCCTTCTTTCTTAGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGTTAGTACCTAACATATGAATCTAGTCAGATTTAATTAGTGTGGCAAAATTAATGCTACAACAATGTCACTTTGGATTACTTGGTTGGTTATAACTAGCGTTTTTATGATCACACAATCATGCTAGAAACTGTTAAGATGTTGTGCATCCGGTGATACATGTGATTTTCAAGCCCTAGCGTGACCACCGCTATTTATTCCACCTCTTGCGAGGCTTGTGGCAAATTGTGTGAATCGAATAATTGTTGCCAGTGTTTGAAAAGGACATAGGGCTTGTATATCAAGTACGTAACAGTAATAAAACTTCATGATTATGTGTAGATAATCCCGGTCTGCCTCGGTACCTTCCAGTGTATAAAAAGGCTAGGCTCTGAGGCGCAAGGCGATTGGAACCAGCGCCTTTTATTGTCTAGGCGAGGCGATTTCGATGAGGCGCACCTAAGGCGCAAAAAGGCGCACCAAGGCGCACAAAGGCGCACTTTGAGGCGCAAAAAAGGCGCACTTACGAAGGCACACACCATTTTTTCACTTTTTTTTAACTTTTTATTAGGGCGCCTCACTTCAATGAGGCGCACCGAGGCGCACCGAGGCGCGCCTAAGGCGCTGGGAACTCCAAATCGCCTTGTTGCGCCTTGAGCCTTTTTATACATTGGTACCTTCTGACATTGTAAGATTCATATGGACACAACTTTTCACACTTTTCGTCAAACAGAGATGCGCAGAGTTTGCAAGAAACTTCTTATATCTTCCCAACAAACTGCCTTACATCAATTTTTTGTCCACTGATTTTATTGCAAATATCCAGGGATATGTGTGTCCTGTTCTTGTTTCTGCATCCTGTGATAGATTGGAGCTGTATATTGTTTAATCACTCTTTAAGTAAGCAATCGGAACCAATAGTAGTTGTAATAGTTGATGCAATTAAATCATCTACGTTGGAATACAGCTTAGGTAGAGAAAGTAAATGGAGATGACAGAATAATCAACATACTTTATCTTTCCCTAAACCCTTTATTTATAGACTAACGAACTACCCTCTTGTTGAATAAGGTATCCATAACAACATTGTTACCACACTTCCTAATGTGCCCTTCTCCTATGGTGCTATACTCGATGCATTTCACTTCCTTCTTCATTTGAGGTGTGGAGGGCTGGATTTAGGAGAGATTATAGGAAGGGTGATGAAAACTGGTAGGGGGAAAAAAGGGAAGAAGACTTTCCATTTAGTTTTTCCAATAAGGCTCTCATTCTCATATGAGGATTCAATCCACTTTCTTGCAAGGAGCACAAGGTGTCCACAGGCAGATGGATCAACTTAAGATGGTCATCGTAGCTTTTGAGAGGTTCTCTAGCAAAGTTGGGTGGATTTAAGTTTATCTTTGGTCGTTCATCAACAACAAACAACTTTTTTTCTACTGAAAAGCATTATCTTTATACTAATAATTCAGAAGCATATCAAAAAACAGAAGGGATTTGTTAAGCATAATACGTCTTACGTGTCAGTCACCTCTGTTTTTTCTTTTTTGTGGCAGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGTTAGTTTCTTCCACCACGCTTGCCTTTTGTAGTTTCCCTGATCAGTCTTCCAGTTGACATGATTTATTAAAGTGGCAAATGAGTATTAACTTCAACTTATTTTATTAATATTCCACTGCCACATTTTGTGCAAAATCCTAAAGTTGTAATTGTAATTATTCATTTTCCTTCTTATTTTTGTGTAGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGTCCGTTCCATTATCTCTGTGAATTATTAGAACAAAATTATGTATCTTGCTCTCTGGATTATCTGAAACTGTGCATTTTGCAGGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAAGTAGGTTTTATTCTTCTTCCCCTGTCAAAATTGGATTCCATAAAAGCATTATTATTATTACGAAAGCTATCTTATTATATATCTATCGTTTCCTTATGTTGCAGCCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGGTAAGGTTTGAATAGTTCAGGGAAATATGCTGTGTTACCATGAGATTTAGGGTATATGAATTTTGTTACTTGAGTTTCTTTTAATTAGTGCTCGTTAAGGTTTGGTCTTACCTCTATAGCTTTCTTTTAGGCTCTGCTAGTTGTGATTTAGAGTTTTTCTGTTCAGCTCAAAACAATATGTTTTAGCTCTTTTGTTGTTTTCTATAGTGACTCCACGAGTCCATGTACACACTGTGTATACTAACAAGGAAAATTTGACATGAATAATCCAAATTTTCACTCATTTTCTATAATAATCCCAACTTTGGAATATTTTAGAATAAACCAAACTTTTGGGGTTACCTTCTCAAAATAATATGAAGTCTTCATTTTTTTGTCATTACTAAACCATTTTGGGTCTATTGTACATAGGCAATTGATAGTTTGGCTTATTTTAAGAAGATATACCGGAAAGTTGGGATTATTCCAGAATAATCCAAAGTTGGGATTATTTTCAGAAGATGAGTGAAAGTTGAGATTATTTATGTCAATTTTTCCTACTAACAATGCATTCCCTTTCTTCTGATTTGTTTTTCAGCAACTTTTTGAAACCAACTTGTCAATATTTTAATATCAAATTTGTTAATGGCAAAAAAATTTGGTAGATGGGTGAGAGGCTAAGAGGTATTAGGGATTTATTTAGCGCTTTGTAAATTAAAGAAATGTCTTTACATGTGCGTGGGTTGCCATTGTGAGACAAACAGTAGACTGCGCAAATGCGCATAGTTTAATTTAAAAACTTGAAGCATTTTTGAGACCTAGACTATGAAACAGTGTTTTTTCCCTGTAAAATGCACCCCTCGTCTCATCTTCCCTTTTCCTTCCATCTTCAGATTATCCCCAGTCCCCTCCTTAATCTGCCGTAACAGCCTACTCTTTTTGTCTAATGTTGGTTGCCTTACCCATCAGCAGTTCCTCTATCCGCCTAATTAAGAGCCTCTTGACAGCTTTGTTCTTTGGAGTTGCAAACTTCATCTTGTTCTTGATGGTCATGTGTGTCGGTGGTGTTTTCTTCAATCTCCATCTTTTTCTTAGCTTTAATTTGAGCCCATGCTCACTCTTGTCCCTAAAGGGGGAATGGTGTTCATGACCTGGATAGCATTTATCAATGTGATCAAATAATAAAATCAGTACTGCTAAAAATTGGTTGTTATGATTCAATTTCAAGATATGGTGAGAATCCCGTCAAAAAAATAATAATAATGGTGAGAGTGAGTTGCTGATAAGGAGATAAACGAATCGTATTTGTGGCAGACTCATACAGTCATACTTTGTGAACGAAATCACCAGTTTGAGTTTTTCACTAGTTTCAAGAATCCAGTTCTTCTATGTTAATTTTTGTGGAAATCAGAATCTTAGTGATAGCATGCATGTTACACATTTACGTATAAGAAGATTCAGAACATAGGATACCACTAATTAATTTTCCTTAAATCTTGAGATAAGGTGTCGAATTTGTTGAACACAGGATGTGCGTTCATTGATTGTTCTAGCTGACACTGTGTTTCCTTAATTGGGCAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAAGTGTGTATTTTCTTTTGCTTGTTTCACATTTGGTCTATCTTGATTTTGGCGTCTCTCCTAGTAATCTAGAACAAAGAAGGAAAGCTACTCAGTCTTATCCCTCTTGGTTCAGTGACTAAGAATGATGCTCGAGTTTTATCCGCTGATGATTTTTGCGAATGGTTTTGTTGGCAACAGTCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGGTGCGTATTATATGATTAACTTTAGATCCACTTGTATTATCTTTTGGATCTTGATTGTGGAGTTGATTCTAATCAGGTTTTCTTTCTCTATGTTGCAGTTGCATATGGCCAGGTATGCATCTCTTGTGCTTGAGTCTTGAATAAATGCTATTTATTATTATGTTCCTTGTTTCTAAAATAAAGGCAGCACATTACTTTCCAGATCAAATCTTATTTACAATGGCCATTATCTTCCATCATAATATCATGATAAAACCTATAAAACCTTAACCTTACAATAGTACTTTTTATGATAAATTTAGCGATGATAATTTCTCATCATAAATAAGTGCAATGTTTTATAAATTGATAGTAAAAGTTCTTATTTTCTTTTATTTTTTCTTGGGTGTTTGTTTTATGGTAATGGGAGGAACCCAACCCTCATTATGGTAAGTTATGTTTAGAAAATTAATTTCCATGTTTTCTGACATTGATATTTTCATGTGAAAATTTTCACCTTCCTTTTGTATGTTTGCTTGGATTTCAATGGCATTACGGTCACCTACTTTCTCATGTTTCAAAAAAAATTGGGTGATACATTTCAAGAATTTTGAAATAGGGGGATTTTGTGTGTGGGTTCAAGCCTTTGTTTCACCAAGGGGTTGTGTGACTTGTGTCTGTTGTTTCTTTCCTTTGTTAAAGAACTTCTAGTCCTAAATTACGTAAATTAATTACTCTTAAATAACTCTTTGTTGCTTCTTCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATGTGAGTTATTTTCCCTTTCCACCTAAAATGATCCTCAATATTTTGCCTCTGCTTTTCCTAATGGTATGGCCAATTCATTTTTCAGAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGTTTGATTCGAATATGAACTTCAAGTGTTTTCATTGCACCTCTCTAGATAGCTTTTTTAAGTTGTGGAGTTCGTTGTTCCTTTGCTGATTAGAGCAAGTTTTGGGTAAATCTGTGAATCTACATTGACATAAAAAAATTGGCGTGTTTTTTTCCATTCTTTATATTTATAAGCTTGTATATTAGTTATTTTCATCAGTCGATTACTCAAACTACTTTATGAAGCTAATCTGGAGTTCAAAACAGCTTAAATCTAATGTAAGAACCAGTTATTCTTTGCCATAAATTCTTTTGGCAAAGTCTGTTGATTGTCTACCAAGTTCTTCTGCACGAGTTTACAGTGAGCTGTATGCCCGTGCCCAGTAACTAGATTTCATAATTGATACTGGTAATTGTTAACCTCAAGTCTGTGCTTTGTACTAATCGCTGTTGCTACTTTTTCCTGAGTTATATTGACCTCACTCCAGATACCTGTATAGCTGTATTCTGAAAATTCTTGAATTACTTCCAAAATTATGTCTTTAAAAAATCGATCCTCTCGGAAGTTATAGCAGTTTAGCACCTGTTGAGAGTAAGCAATTTTCTTCCATCTCCTGCCTGAGTAATTTCGAGAATTTATGACAAGTTTGATTACAAAATTTTGTGTTCAGACTTCAGAAGGCAATTTTTTTGCTGTAACTTTCTAACATTTTGCTTGTTATCCTTGAAACTTCAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

mRNA sequence

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGAAAGATATTGGTGGCTGCTTGCTTAGGTTTGAATTTTACTCTTCAAAGGTTTTGCTTGTTAACTTACAATTATCAAGTTTTCTGTTTTGTAAAAACTTCCCAATTCTTTTCCTCTCTTTGCCTTCCCATTAGTCTCTATAGCTTGTAGCATTGAGTAACTTTTACATACATATTCATTTTATAAGGCTTATTGTTTGGATTAGTGGTATTTTTTGTGTTTTTGGGCATCTTTTTCACTTTTACACTCATTTTGGTAAGATTCCAACATCTGACCTTTGAGATTTGAGATGAGAACCTTA

Coding sequence (CDS)

ATGAAGATGATGTGTACTGCTGAGGTGGTGCTGACAAGCATTACAGCTGTAGTTAACAATTTAGGACCTAGACAAATTACAATGTCAAATTCTGGATATCTTTCAAGTAGAACATCTTCACTGTTTATAAACAGTTTCTTGATTAAAATGTCTGAAACTTCCAAGGTTATTCATGTCCGCAATGTGGGCCATGAAATCACTGAGAATGATTTGCTTCAATTGGTTCAACCATTTGGGTCTGTCACCAAGCTTGTGATGCTACGTACCAAGAACCAGGCACTTTTGCAAATGCAGGATATGGCATCAGCAATTAATTTAGTGGATTACTACACAAATGTTCAGCCCAATGTGCGGGGTCGAAATGTTTACATGCAATTTTCTTCCCATCAAGAACTGACAACAGATCAGACTCAAGGACGCAAAAGTGACACGGATGGACAGCCAAATCGTATTCTTTTGGTCAGTATACATCAAGTCATTTATCCTATGACTGTTGATGTTCTCAATCAAGTGTTTTCTCCATATGGGTTTGTGGAAAAAGTTGTTACATTTCAAAAGTCAGCTGGCTATCAAGCTCTCATCCAGTTTCAAACACGTCAGAGTGCTGCTTCTGCAATGAGTGCCCTCCATGGGCGGAATGTGTACGATGGTTGCTGTCAGTTAGATGTACAATACTCAAACCTTACAGAGCTACAAGTGAATTTTAATAATGATCGATCGAGAGATTTCACAAACCCAAATCTTCCTTCAGAACAGAGAGGCAGAAGTTCACAATCTGGTTATGGTGATGCCGGGGGAATGTATCCGTTTCAAGCTACCGGGAGTGGCGCAGTTGCATATGGCCAGTTGGGAAATAATGCAGCAATGACTGCTTTTCCTGGTGGCCTCCCTCCAGGTGTTAGTGGCACCAATGAGAGATGTACTGTCATAGTATCTAATTTAAATCCCGATAAAATAGATGAAGACAAGTTGTTCAACTTATTTTCGCTGTATGGCAACATTGTAAGGATTAAGCTTCTCCGAGGCAAACCTGATCATGCCCTCGTCGAAATGTCTGATGGTTTTCAAGCTGAATTGGCTGTTAACTTCTTAAAGGGAGCACTACTGTTTGGGAAACGGATAGAAGTGAACTACTCCAAGTATTCGAACATTACACCATCTACAGACACCCGAGATTACCAGAATTCAAACCTGAATCGTTTTAACCATAATGCAGCAAAACACTACAAATATTGTTGCTCTCCAACAAAAATGATTCACCTATCAAGTGTCCCCGAAGATGTAAGTCAAGAGGAGATTGTAGACTTGATGGAGGAACACGGCAAGGTCGTCAGCACTAAGATTTTCGAGGCAAATGGAAAGAAACAAGTTTTAGTTTTATTCGAGTCTGAAGAAGAGGCGACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTTTGTGGATCAATCATCCGCATCTCTTTCTCCCAATCGCAAAACACTTGA

Protein sequence

MKMMCTAEVVLTSITAVVNNLGPRQITMSNSGYLSSRTSSLFINSFLIKMSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVCGSIIRISFSQSQNT

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo18644.1	Spo18644.1	mRNA

Homology

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|902213059|gb|KNA17164.1| (hypothetical protein SOVF_082600 [Spinacia oleracea])

HSP 1 Score: 872.5 bits (2253), Expect = 3.600e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|731338381|ref|XP_010680298.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 821.6 bits (2121), Expect = 7.300e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|359480735|ref|XP_002277938.2| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X1 [Vitis vinifera])

HSP 1 Score: 686.0 bits (1769), Expect = 4.800e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|720015939|ref|XP_010260994.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 681.8 bits (1758), Expect = 9.000e-193
Identity = 340/446 (76.23%), Postives = 404/446 (90.58%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQLVQPFG VTKLVMLR KNQALLQM D+ASA+N + Y
Sbjct: 1   MTEPSKVIHIRNVGHEISENDLLQLVQPFGVVTKLVMLRAKNQALLQMHDVASAVNALHY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQT-QGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           YTNVQP+VRGRNVY+QFSSHQELTT DQ  QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YTNVQPSVRGRNVYIQFSSHQELTTMDQNAQGRKGDQDTQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L+ELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGDAGGMY  Q  G+ AVA+ Q+GN A
Sbjct: 181 LSELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDAGGMYSLQ-PGARAVAFPQMGNAA 240

Query: 290 AM-TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+  AF GGLPPG+SGTN+RCT++VSNLN DKIDEDKLFNLFS+YGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTILVSNLNSDKIDEDKLFNLFSIYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NIT + DTR+Y NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHLNITAAPDTREYLNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+D+++EEI+  +EEHG +V+TK+FE NGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDITEEEIIAHLEEHGNIVNTKLFEVNGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+++  S+IRISFSQ Q
Sbjct: 421 ATEALVCKHASTIDRSVIRISFSQLQ 445

[Close]

BLAST of Spo18644.1 vs. NCBI nr
Match: gi|702382324|ref|XP_010063840.1| (PREDICTED: polypyrimidine tract-binding protein homolog 3-like [Eucalyptus grandis])

HSP 1 Score: 680.6 bits (1755), Expect = 2.000e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082600 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 2.500e-250
Identity = 444/445 (99.78%), Postives = 444/445 (99.78%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           Y NVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN
Sbjct: 61  YANVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM
Sbjct: 181 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
           TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALVCKHATSVCGSIIRISFSQSQNT
Sbjct: 421 ALVCKHATSVCGSIIRISFSQSQNT 445

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133380 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 5.100e-235
Identity = 411/445 (92.36%), Postives = 435/445 (97.75%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQD+A+AINLVDY
Sbjct: 1   MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVATAINLVDY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVLN 169
           YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIH VIYPMTVDVLN
Sbjct: 61  YTNVQPNVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHHVIYPMTVDVLN 120

Query: 170 QVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNLT 229
           QVFSPYGFVEKVVTFQKSAGYQAL+Q+QTRQSAASAMSALHGRN+YDGCCQLDVQYSNLT
Sbjct: 121 QVFSPYGFVEKVVTFQKSAGYQALVQYQTRQSAASAMSALHGRNIYDGCCQLDVQYSNLT 180

Query: 230 ELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAAM 289
           ELQVN NNDRSRDFTNPNLPSEQRGRSSQSGYGDAGG++PFQ TGSGAVAYGQ+GN AAM
Sbjct: 181 ELQVNSNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGLFPFQPTGSGAVAYGQMGNAAAM 240

Query: 290 TAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 349
            AF GGLPPGVSGTN+RCTVIVSNLNPD+IDEDKLFNLFSLYGNIVRIKLLRGKPDHALV
Sbjct: 241 AAFSGGLPPGVSGTNDRCTVIVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRGKPDHALV 300

Query: 350 EMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAKHY 409
           EMSDGFQAELAV+FLKGA+LFGK+IEVN+SKYSNITPS DTRDYQNSNLNRFNHNAAKHY
Sbjct: 301 EMSDGFQAELAVHFLKGAILFGKKIEVNFSKYSNITPSPDTRDYQNSNLNRFNHNAAKHY 360

Query: 410 KYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATE 469
           KYCCSPTKMIHLSSVPEDVS+EEIV+L+EEHG+VV+TK+FEANGKKQ LV FE+EE+ATE
Sbjct: 361 KYCCSPTKMIHLSSVPEDVSEEEIVELIEEHGQVVNTKVFEANGKKQALVQFETEEQATE 420

Query: 470 ALVCKHATSVCGSIIRISFSQSQNT 495
           ALV KHATSVCGSI+RISFSQSQ+T
Sbjct: 421 ALVSKHATSVCGSIVRISFSQSQST 445

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: F6H4C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g02030 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 3.300e-194
Identity = 341/446 (76.46%), Postives = 402/446 (90.13%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVG EI+ENDLLQLV PFG VTKLVMLR KNQALLQMQD+ASA++ + Y
Sbjct: 1   MTEPSKVIHVRNVGPEISENDLLQLVHPFGVVTKLVMLRAKNQALLQMQDVASAVSALQY 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y NVQP+VRGRNVY+QFSSHQELTT DQ +QGRK D D QPNRILLV+IH ++YP+TV+V
Sbjct: 61  YANVQPSVRGRNVYVQFSSHQELTTMDQNSQGRKGDQDAQPNRILLVTIHHLLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSP+GFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVSAINALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           LTELQVN+NN+RSRDFTNP+LPSEQ+GRSSQSGYGD GGMY  Q  G+  VA+ Q+GN  
Sbjct: 181 LTELQVNYNNERSRDFTNPSLPSEQKGRSSQSGYGDGGGMYALQPPGARPVAFPQMGNAT 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG+SGTN+RCTV+VSNLNPD+IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGISGTNDRCTVLVSNLNPDEIDEDKLFNLFSLYGNIVRIKLLRSKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SKY NITP+ DT DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPAPDTHDYSNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIH+S++P+D+++EEIV  +E+HG +V+TK+FEANGKKQ LVLFE+EE+
Sbjct: 361 KNYRYCCSPTKMIHVSTLPQDITEEEIVTHLEKHGSIVNTKLFEANGKKQALVLFETEEQ 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           ATEALVCKHA+ + GS IRISFSQ Q
Sbjct: 421 ATEALVCKHASLIDGSTIRISFSQLQ 446

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BYT0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04205 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.400e-192
Identity = 342/447 (76.51%), Postives = 401/447 (89.71%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIH+RNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN +  
Sbjct: 1   MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQ-TQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           Y+NVQP +RGRNVY+QFSSHQELTT DQ TQGR  +    PNRI+LV+IH ++YP+TV+V
Sbjct: 61  YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDE----PNRIVLVTIHHMLYPITVEV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQSA SA++AL GRN+YDGCCQLD+QYSN
Sbjct: 121 LHQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQ-SGYGDAGGMYPFQATGSGAVAYGQLGNN 289
           L ELQVNFNN+RSRDFTNPNLP+EQRGRSSQ +GYGDAGGMYPF A+G+  VA+ Q+ N 
Sbjct: 181 LDELQVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNA 240

Query: 290 AAMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPD 349
           AA+ A F GGLPPGVSGTN+RCTV+VSNLNPD IDEDKLFNLFSLYGNIVRIKLLR KPD
Sbjct: 241 AAIAAAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPD 300

Query: 350 HALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNA 409
           HALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP  +T +Y NSNLNRFN NA
Sbjct: 301 HALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNA 360

Query: 410 AKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEE 469
           AK+Y+YCCSPTKMIHLS++P+++++EEIV L+EEHG +VSTK+FE NGKKQ LV+FE+EE
Sbjct: 361 AKNYRYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEE 420

Query: 470 EATEALVCKHATSVCGSIIRISFSQSQ 493
           +ATEALVCKHA+SV GSIIRISFSQ Q
Sbjct: 421 QATEALVCKHASSVAGSIIRISFSQLQ 443

[Close]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Match: A0A059BT87_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02695 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.600e-188
Identity = 334/445 (75.06%), Postives = 391/445 (87.87%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E SKVIHVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD+ SAIN + +
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT-DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDVL 169
           Y NVQP++RGRNVY+QFSSHQELTT DQ    + D   +PNRILLV+IH ++YP+TV+VL
Sbjct: 61  YANVQPSIRGRNVYVQFSSHQELTTVDQNAQARGD---EPNRILLVTIHHMLYPITVEVL 120

Query: 170 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSNL 229
            QVFSPYGFVEK+VTFQKSAG+QALIQ+Q+RQ A +A ++L GRN+YDGCCQLD+Q+SNL
Sbjct: 121 QQVFSPYGFVEKIVTFQKSAGFQALIQYQSRQCAIAARTSLQGRNIYDGCCQLDIQFSNL 180

Query: 230 TELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNAA 289
            ELQVN+NN+RSRDFTNPNLPSEQ+GRSSQ GYGDAG +Y  QA G+ AV + Q+ N AA
Sbjct: 181 DELQVNYNNERSRDFTNPNLPSEQKGRSSQPGYGDAGSIYALQAGGARAVPFPQMANAAA 240

Query: 290 MTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHA 349
           + A F GGLPPG+SGTN+RCTV+VSNLNPDKIDEDKLFNLFSLYGNIVRIKLLR KPDHA
Sbjct: 241 IAAAFGGGLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRNKPDHA 300

Query: 350 LVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAAK 409
           LVEM DGFQAELAV+FLKGA LFGKR+EVN+SK+ +IT   DT DY NSNLNRFN NAAK
Sbjct: 301 LVEMGDGFQAELAVHFLKGAALFGKRLEVNFSKHPSITQGADTHDYMNSNLNRFNRNAAK 360

Query: 410 HYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEA 469
           +Y+YCCSPTKMIHLSS+P++V++EEIV  +EEHG +V+TK+FE NGKKQ LVLFE+EE+A
Sbjct: 361 NYRYCCSPTKMIHLSSLPQEVTEEEIVKHLEEHGPIVNTKVFEMNGKKQALVLFENEEQA 420

Query: 470 TEALVCKHATSVCGSIIRISFSQSQ 493
           TEALVCKHA+S+ GSIIRISFSQ Q
Sbjct: 421 TEALVCKHASSLAGSIIRISFSQLQ 442

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP3_ARATH (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 1.100e-182
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_HUMAN (Polypyrimidine tract-binding protein 1 OS=Homo sapiens GN=PTBP1 PE=1 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.200e-73
Identity = 172/475 (36.21%), Postives = 271/475 (57.05%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK I +  SK+ N+
Sbjct: 358 FILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  VS+E++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G VV    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 529

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_BOVIN (Polypyrimidine tract-binding protein 1 OS=Bos taurus GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.900e-72
Identity = 167/475 (35.16%), Postives = 271/475 (57.05%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAG 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS     S       A 
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 297

Query: 294 GMYPFQATGSGAVAYGQLGNNAAMTAFPGGLP-PGVSGTNERCTVIVSNLNPDKIDEDKL 353
           G+        GA+A   + + AA  A  G +  PG++G      ++VSNLNP+++    L
Sbjct: 298 GLSVPNV--HGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS-VLLVSNLNPERVTPQSL 357

Query: 354 FNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNI 413
           F LF +YG++ R+K+L  K ++ALV+M+DG QA+LA++ L G  L GK + +  SK+ ++
Sbjct: 358 FILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQSV 417

Query: 414 TPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCSPTKMIHLSSVPEDVSQEEIVDLM 473
               +       T+DY NS L+RF    +K+++    P+  +HLS++P  +S++++  L 
Sbjct: 418 QLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILF 477

Query: 474 EEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCKHATSVC-GSIIRISFSQS 492
             +G +V    F    +K  L+   S EEA +AL+  H   +     +R+SFS+S
Sbjct: 478 SSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKS 529

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_PIG (Polypyrimidine tract-binding protein 1 OS=Sus scrofa GN=PTBP1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.000e-71
Identity = 175/499 (35.07%), Postives = 276/499 (55.31%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIH+R +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 58  SRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSV 117

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 118 TPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 177

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 178 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 237

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR------------ 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS               
Sbjct: 238 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDNQPSLDQTMAAAF 297

Query: 294 ---GRSSQSGYGDAGG----MYPFQATGS-----GAVAYGQLGNNAAMTAFPGGLP-PGV 353
              G  S S Y  AG       P  AT S     GA+A   + + AA  A  G +  PG+
Sbjct: 298 GAPGIMSASPYAGAGFPPTFAIPQAATVSVPNVHGALAPLAIPSAAARAAAAGRIAIPGL 357

Query: 354 SGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELA 413
           +G      ++VSNLNP+++    LF LF +Y ++ R+K+L  K ++ALV+M+DG QA+LA
Sbjct: 358 AGAGNS-VLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNKKENALVQMADGSQAQLA 417

Query: 414 VNFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCC 473
           ++ L G  L GK + +  SK+ N+    +       T+DY NS L+RF    +K+++   
Sbjct: 418 MSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF 477

Query: 474 SPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVC 492
            P+  +HLS++P  +S+E++  L   +G +V    F    +K  L+   S EEA +AL+ 
Sbjct: 478 PPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALID 537

[Close]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Match: PTBP1_RAT (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus GN=Ptbp1 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.100e-71
Identity = 171/498 (34.34%), Postives = 276/498 (55.42%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDYYTNV 113
           S+VIHVR +  ++TE +++ L  PFG VT L+ML+ KNQA ++M    +A  +V+YYT+V
Sbjct: 57  SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTSV 116

Query: 114 QPNVRGRNVYMQFSSHQELTTDQT----------QGRKSDTDGQ---------------- 173
            P +RG+ +Y+QFS+H+EL TD +          Q   S   G                 
Sbjct: 117 APVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAM 176

Query: 174 --PNRILLVSIHQVIYPMTVDVLNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASA 233
              + +L + +  + YP+T+DVL+Q+FS +G V K++TF K+  +QAL+Q+    SA  A
Sbjct: 177 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHA 236

Query: 234 MSALHGRNVYDGCCQLDVQYSNLTELQVNFNNDRSRDFTNPNLPSEQR----GRSSQSGY 293
             +L G+N+Y+ CC L + +S LT L V +NND+SRD+T P+LPS        ++  + +
Sbjct: 237 KLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF 296

Query: 294 GDAGGMYPFQATGS-------------------GAVAYGQLGNNAAMTAFPGGLP-PGVS 353
           G  G M      G+                   GA+A   + + AA  A  G +  PG++
Sbjct: 297 GAPGIMSASPYAGAVPSHLCHPSRAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLA 356

Query: 354 GTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDHALVEMSDGFQAELAV 413
           G      ++VSNLNP+++    LF LF +YG++ R+K+L  K ++ALVEM+DG QA+LA+
Sbjct: 357 GAGNS-VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVEMADGSQAQLAM 416

Query: 414 NFLKGALLFGKRIEVNYSKYSNITPSTD-------TRDYQNSNLNRFNHNAAKHYKYCCS 473
           + L G  L GK + +  SK+ ++    +       T+DY +S L+RF    +K+++    
Sbjct: 417 SHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFP 476

Query: 474 PTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEEATEALVCK 492
           P+  +HLS++P  VS++++  L   +G VV    F    +K  L+   S EEA +AL+  
Sbjct: 477 PSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIEL 536

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3)

HSP 1 Score: 641.0 bits (1652), Expect = 6.200e-184
Identity = 321/446 (71.97%), Postives = 384/446 (86.10%), Query Frame = 1

		  
Query: 50  MSETSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDMASAINLVDY 109
           M+E+SKV+HVRNVGHEI+ENDLLQL QPFG +TKLVMLR KNQALLQMQD++SA++ + +
Sbjct: 1   MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60

Query: 110 YTNVQPNVRGRNVYMQFSSHQELTT--DQTQGRKSDTDGQPNRILLVSIHQVIYPMTVDV 169
           +TNVQP +RGRNVY+QFSSHQELTT      GR+ +    PNRILLV+IH ++YP+TVDV
Sbjct: 61  FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDE----PNRILLVTIHHMLYPITVDV 120

Query: 170 LNQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNVYDGCCQLDVQYSN 229
           L+QVFSPYGFVEK+VTFQKSAG+QALIQ+Q +Q AASA +AL GRN+YDGCCQLD+Q+SN
Sbjct: 121 LHQVFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSN 180

Query: 230 LTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYGQLGNNA 289
           L ELQVN+NNDRSRD+TNPNLP+EQ+GRSS   YGD G            VAY Q+ N +
Sbjct: 181 LEELQVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTG------------VAYPQMANTS 240

Query: 290 AMTA-FPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRGKPDH 349
           A+ A F GGLPPG++GTN+RCTV+VSNLN D IDEDKLFNLFSLYGNIVRIKLLR KPDH
Sbjct: 241 AIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDH 300

Query: 350 ALVEMSDGFQAELAVNFLKGALLFGKRIEVNYSKYSNITPSTDTRDYQNSNLNRFNHNAA 409
           ALV+M DGFQAELAV+FLKGA+LFGKR+EVN+SK+ NITP TD+ DY NSNLNRFN NAA
Sbjct: 301 ALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAA 360

Query: 410 KHYKYCCSPTKMIHLSSVPEDVSQEEIVDLMEEHGKVVSTKIFEANGKKQVLVLFESEEE 469
           K+Y+YCCSPTKMIHLS++P+DV++EE+++ ++EHG VV+TK+FE NGKKQ LV FE+EEE
Sbjct: 361 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 420

Query: 470 ATEALVCKHATSVCGSIIRISFSQSQ 493
           A EALVCKHATS+ GSIIRISFSQ Q
Sbjct: 421 AAEALVCKHATSLGGSIIRISFSQLQ 430

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2)

HSP 1 Score: 146.0 bits (367), Expect = 6.300e-35
Identity = 115/363 (31.68%), Postives = 187/363 (51.52%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E TE +L++L +PFG+V  TK  +   +NQA ++ +D+  AI ++ YY 
Sbjct: 17  SKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYYA 76

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQVIYPM-TVDVL 173
           +      VRG+ VY+Q+S+ QE+  ++T    +D  G    +LLV+I      M ++DVL
Sbjct: 77  SSSEPAQVRGKTVYLQYSNRQEIVNNKTT---ADVVGN---VLLVTIEGDDARMVSIDVL 136

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AGYQAL+QF   ++A +A  AL GR++         G C L
Sbjct: 137 HLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSL 196

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQRGRSSQSGYGDAGGMYPFQATGSGAVAYG 293
            + YS  T+L V F + RSRD+TNP LP                 + P     +G VA G
Sbjct: 197 KITYSAHTDLTVKFQSHRSRDYTNPYLP-----------------VAPSAIDSTGQVAVG 256

Query: 294 QLGNNAAMTAFPGGLPPGVSGTNERCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLL- 353
             G    M      L   +       T+            D L  +F+ +G + +I +  
Sbjct: 257 VDGKK--MEPESNVLLASIENMQYAVTL------------DVLHMVFAAFGEVQKIAMFD 316

Query: 354 RGKPDHALVEMSDGFQAELAVNFLKGALLFGK---RIEVNYSKYSNITPSTD---TRDYQ 398
           +     AL++ SD   A +A   L+G  ++     ++ + YS++++++   +   +RDY 
Sbjct: 317 KNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYT 342

[Close]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1)

HSP 1 Score: 141.4 bits (355), Expect = 1.500e-33
Identity = 81/211 (38.39%), Postives = 130/211 (61.61%), Query Frame = 1

		  
Query: 54  SKVIHVRNVGHEITENDLLQLVQPFGSV--TKLVMLRTKNQALLQMQDMASAINLVDYYT 113
           SKV+H+RN+  E  E +L+ L + FG +  TK  +   +NQA ++  D+  AI++V YY 
Sbjct: 16  SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFADLNQAISMVSYYA 75

Query: 114 NVQP--NVRGRNVYMQFSSHQELTTDQTQGRKSDTDGQPNRILLVSIHQV-IYPMTVDVL 173
           +      +RG+ VY+Q+S+  E+  +Q+ G        P  +LLV+   V  + +++DV+
Sbjct: 76  SSSEPAQIRGKTVYIQYSNRHEIVNNQSPG------DVPGNVLLVTFEGVESHEVSIDVI 135

Query: 174 NQVFSPYGFVEKVVTFQKSAGYQALIQFQTRQSAASAMSALHGRNV-------YDGCCQL 233
           + VFS +GFV K+ TF+K+AG+QAL+QF   ++A++A SAL GR++       + G C L
Sbjct: 136 HLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSL 195

Query: 234 DVQYSNLTELQVNFNNDRSRDFTNPNLPSEQ 253
            + YS  T+L + F + RSRD+TNP LP  Q
Sbjct: 196 RMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQ 220

The following BLAST results are available for this feature:

BLAST of Spo18644.1 vs. NCBI nr
BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
BLAST of Spo18644.1 vs. TAIR (Arabidopsis)

BLAST of Spo18644.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902213059\|gb\|KNA17164.1\|	3.6e-250	99.7	hypothetical protein SOVF_0826...	[more]
gi\|731338381\|ref\|XP_010680298.1\|	7.3e-235	92.3	PREDICTED: polypyrimidine trac...	[more]
gi\|359480735\|ref\|XP_002277938.2\|	4.8e-194	76.4	PREDICTED: polypyrimidine trac...	[more]
gi\|720015939\|ref\|XP_010260994.1\|	9.0e-193	76.2	PREDICTED: polypyrimidine trac...	[more]
gi\|702382324\|ref\|XP_010063840.1\|	2.0e-192	76.5	PREDICTED: polypyrimidine trac...	[more]

BLAST of Spo18644.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RDV7_SPIOL	2.5e-250	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8CB36_BETVU	5.1e-235	92.3	Uncharacterized protein OS=Bet...	[more]
F6H4C6_VITVI	3.3e-194	76.4	Putative uncharacterized prote...	[more]
A0A059BYT0_EUCGR	1.4e-192	76.5	Uncharacterized protein OS=Euc...	[more]
A0A059BT87_EUCGR	1.6e-188	75.0	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo18644.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
PTBP3_ARATH	1.1e-182	71.9	Polypyrimidine tract-binding p...	[more]
PTBP1_HUMAN	4.2e-73	36.2	Polypyrimidine tract-binding p...	[more]
PTBP1_BOVIN	7.9e-72	35.1	Polypyrimidine tract-binding p...	[more]
PTBP1_PIG	3.0e-71	35.0	Polypyrimidine tract-binding p...	[more]
PTBP1_RAT	5.1e-71	34.3	Polypyrimidine tract-binding p...	[more]

BLAST of Spo18644.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G43190.1	6.2e-184	71.9	polypyrimidine tract-binding p...	[more]
AT5G53180.1	6.3e-35	31.6	polypyrimidine tract-binding p...	[more]
AT3G01150.1	1.5e-33	38.3	polypyrimidine tract-binding p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 58..108 score: 1.5E-4coord: 422..484 score: 6.7E-7coord: 161..215 score: 6.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 56..125 score: 7.5E-6coord: 308..377 score: 3.1E-13coord: 418..487 score: 1.4E-7coord: 153..222 score:
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 417..491 score: 11.179coord: 307..381 score: 13.089coord: 149..228 score: 9.183coord: 55..129 score: 9
IPR006536	HnRNP-L/PTB	TIGRFAMs	TIGR01649	TIGR01649	coord: 54..492 score: 6.0E
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 304..401 score: 3.9E-23coord: 154..249 score: 9.6E-28coord: 52..138 score: 1.6E-21coord: 406..492 score: 3.5
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 152..249 score: 6.38E-17coord: 51..139 score: 1.33E-17coord: 306..492 score: 4.26
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 151..376 score: 3.1E-71coord: 54..135 score: 3.1
None	No IPR available	PFAM	PF13893	RRM_5	coord: 309..385 score: 2.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0009987	cellular process
biological_process	GO:0006893	Golgi to plasma membrane transport
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0022414	reproductive process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0048765	root hair cell differentiation
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0050826	response to freezing
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0045694	regulation of embryo sac egg cell differentiation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0043484	regulation of RNA splicing
biological_process	GO:0045010	actin nucleation
biological_process	GO:0007155	cell adhesion
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0006996	organelle organization
biological_process	GO:0034654	nucleobase-containing compound biosynthetic process
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0006260	DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0071555	cell wall organization
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0048589	developmental growth
biological_process	GO:0048449	floral organ formation
biological_process	GO:0010014	meristem initiation
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0008152	metabolic process
biological_process	GO:0003002	regionalization
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0010048	vernalization response
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0006769	nicotinamide metabolic process
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0009630	gravitropism
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0046497	nicotinate nucleotide metabolic process
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048575	short-day photoperiodism, flowering
biological_process	GO:0051571	positive regulation of histone H3-K4 methylation
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0019915	lipid storage
biological_process	GO:0000741	karyogamy
biological_process	GO:0016571	histone methylation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006396	RNA processing
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006075	(1->3)-beta-D-glucan biosynthetic process
biological_process	GO:0006306	DNA methylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0016572	histone phosphorylation
biological_process	GO:0061087	positive regulation of histone H3-K27 methylation
biological_process	GO:0080090	regulation of primary metabolic process
cellular_component	GO:0031209	SCAR complex
cellular_component	GO:0000145	exocyst
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0005677	chromatin silencing complex
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0016020	membrane
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0045254	pyruvate dehydrogenase complex
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0000148	1,3-beta-D-glucan synthase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0000932	P-body
cellular_component	GO:0005634	nucleus
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity
molecular_function	GO:0004143	diacylglycerol kinase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0008171	O-methyltransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0008378	galactosyltransferase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0035091	phosphatidylinositol binding
molecular_function	GO:0003843	1,3-beta-D-glucan synthase activity
molecular_function	GO:0003689	DNA clamp loader activity
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0003951	NAD+ kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo07884	0.72	Barchart \| Table
Spo20745	0.71	Barchart \| Table
Spo19506	0.70	Barchart \| Table
Spo10319	0.70	Barchart \| Table
Spo10563	0.70	Barchart \| Table
Spo11308	0.69	Barchart \| Table
Spo15938	0.69	Barchart \| Table
Spo14398	0.68	Barchart \| Table
Spo07876	0.68	Barchart \| Table
Spo03825	0.68	Barchart \| Table
Spo22972	0.68	Barchart \| Table
Spo05948	0.67	Barchart \| Table
Spo22780	0.67	Barchart \| Table
Spo01502	0.67	Barchart \| Table
Spo02483	0.67	Barchart \| Table
Spo09847	0.67	Barchart \| Table
Spo13174	0.67	Barchart \| Table
Spo15431	0.67	Barchart \| Table
Spo17067	0.67	Barchart \| Table
Spo23479	0.66	Barchart \| Table
Spo00137	0.66	Barchart \| Table
Spo17616	0.66	Barchart \| Table
Spo23669	0.66	Barchart \| Table
Spo16355	0.66	Barchart \| Table
Spo10793	0.66	Barchart \| Table
Spo03077	0.66	Barchart \| Table
Spo02190	0.66	Barchart \| Table
Spo27057	0.65	Barchart \| Table
Spo07441	0.65	Barchart \| Table
Spo08342	0.65	Barchart \| Table
Spo08779	0.65	Barchart \| Table
Spo09662	0.65	Barchart \| Table
Spo10986	0.65	Barchart \| Table
Spo18614	0.65	Barchart \| Table