Spo17397 (gene)

Overview
NameSpo17397
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02496 : 18326 .. 22644 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCAGGGAGAGGCTTTGGGAGTTTCCCGAGGACCGTTTTGCCACTCTCCCTTGAAGACCACCTTCTACGGTGGTCTTCTTCAGCCGATGAGTTCTCCGACCACCGTCAAAACGGTCCTCATCCCGCGGGAAAGATTAACGGCTTCTCTTTCTTACTACTACTACGTACTGTACTCCGTATTAATTTCTATTCTACTACTACAACTACTACCGTTTCATCATGATCTTTATTTTCACCCTTCAAAATAAATAATAAAAAAAATATTGGGACCCTTTGAGGCAGTGATGAATGCGAACCGTTCAAAGAAATCAAATTCAATTTGGATTTGTGGGGATTTTTAAGAAGTGGGGTAATTTTCCATTTGGCCTGGCAGCAACCTTAGTGTTCAGTTTGCCGCTAAATGGGTAGATTTTGCTCCCCTTGAAATTCTCCCCCGAATTGTTTTGATTAAATGCAGATCTGAGCCTCCTTTCCTTCCACCCTTTCTGGGGAATTTTAGTTGCGAAGCTTGAAATGCTGTTATGGTAACGTTAGCTCTCGTGATTTTTTTCTCTGGGTAAGTACTTTTTTTCATATTGTGAAATTAGATTCTTGATCCATTTGCATGTAATTTCATGTCATTGATATGGGTAAAAGTTTGTTTTTTTCAATTTTGGGGTGTGGGAATTTCTTGCAGATTATTCAGAAGATTGTATGAAGTTTAATTCTAAGTTTGTTTTGTCAATGAATTGCTAGGGTTTGAAATTATTGATTTTAGATGGTAAATGTTGATTCTTTTATGGTAAAATTTGTTCATGTCAGTCTTAGTCAGGTGTTAAATTAGAGTTTTGATATTGCATGTTATAATTTATCACTTAATTTTGTATTTTTGTTTGCCTTTAAACAATGGATTGCTTAAAGTTTTGCAATGCTCTTGGGTGATTGCAGATGTTAGGTATATATCAACTAAAGAGGGGGCTTCACATCGATTATCTGATGATAAGTATGTTCCCTGCCATGTAAATTTTCATGGTGAGGTATTTATCCTGATTTTCGTCCTCCATGTGGCAAATTTCGAGTCTTTGTGTATTGCTGTTTTAGTATATTCTCTTTGCTCTACATGAAAATGTGTGAATTATTAGTCATCAAACTGTTAGACTGCAAAGAACTACTTGATGAAATGGTTATTTAGTTTGATTAGACATCAAAGAACTACTTGATGAAATGGTTATTTAGTACTTTAACGTTAAGGTTTTGGGATGCTACAGGTACTCAATACATCCACAAGCAATTTTTTCATTGTTCTTAATATACTTTTCTTACTTAAAGTGATTGAGGCTGTGTTAATGCACACTGATTATTAAGCTATTGCTTTCATATGGGTGATCCGGCGTTGAAGTGTTGATGGTTTGTTAGTTAAATGTACCAGGATCTCAGGGGAAAAAAGACTAGACAGTTCTTTACATTTTCTAAAATATTTCTGGCTTGAATTTTGAGAGGATGTTATGTGAATATTATTGCTAAAAAGACATTAAATATTTGTTTGTATTGGATTTTGAAATTTTGATTTGAGAACATCTTGGTTTTGGTTGACAGTTTTAAGTTTGCAGCGACAATAGTACATTTTTTGCCTAATAGAACTAAACTATTATAGTGACCGGTTGAATAATGGTAGTGATGGTTTTGATAATTGTTGCTTTTGTATTTCAGGGTCTTTGTTCGGCAACACAGAAGGGGTTTATGATTTATCAAAAACATGATGAGTTTAAGAATGAGGCTGGGAGAGGCTATGGGAGTTTCCTAAGACCATTTTGTTCCTCTCTTCTGATGACCAACTCTACTGGCAGTCATCAATAGCCCATGATTTCTCCAAACACTCAGAAAATGGTCATCAGAGAAAAGGCTGCTGAGCCAGTTTCTTTTATTTGAGCATTCTTCTTCTCTTATGCAACTTCTCCGGAATCTTATATTGCTCTGTCTTTTCCAGTTCCATCTAAAGAGGTTGTCCTTCCTCCATCCAAATTGAGGATTGAGGATCAAAGTTTTCCAGAAATCCAATTTCGTAGTTACTCGCTCTGTCTTTGGTGAATCTTGTCTCAATTTCTTTCATTGCTAACTCTTTCAATTTGGATTGATTATTAGAAAAAAAAAAAATCAGACCCCCCTTGGTTAGGAACTTATGACAGAGGCTGGAGAGGCTATGGGAGTTTCTGTGGACCGTTTTGCCCCTCTCCTTTGATGACCACTTTTACCAGCGGTCATCTATATTGCAAATGATTTCTCCAGAACCAGAAAATGGTCCTTCAACTTGAATAGGGAGTTCCCAGTTGAGAAAGATGAATACGAAGCATGTGGAGTCTAGTGTCGTTTTTAAACTAATTGGAGGCAGTGATGATCATAGACCAAGGGCCTGTTCTTTTCACCTGTGAAACTTTTACTTATCTGAGCTTTCTGAACTGAACTTATGTATCTGAAGTTTCTGAACTGAACTTATATATCTGAAGTTTCTGAACTGAACTTATATATCTGAACTTTTTGAACTGAACTTATATATCTGAACTTTCTGAACTGAACTGTATGAACCTATTGAACATGGAACTTTTTAAGGTGAAAAGAACAGGGCTGCAGTAATCAGGCTCTTGAGAAACGGCCTAGAGGGTCTTGCATGTGCTTGGCAGGGCAGCAAATGGAACTCTTAGTTTATGAGTTTTGCCTGCTTTGCCGCCATTGCTTAACCTTAAGGCCCCTTTCTATGCCTGATGAAAGCGAATCTGAGCCTTGTTTTTCTCACAAAAAAATTTGTGGGGGATGGTTTCATTGGTTTAGTGGGGGCATAGAGGTAGAGGTTGTTTTTTCTCTTTTCACAAGTTTTGTGTCTTCATGAAATTTTCATGAAATGTTCCAACTGTCAGCCAAAGTGCTAACCACGGAACTAACCAGTGTCTAATTCTGATAAGGGGAATTCAGGTGAAAATAAGGAAGCCTCTCTTTGTGCATGTTTGTATTGGTTCTAATTATTTCCTGCCCTTGTTATGATTTCATCATGTATGAAAAGCTTATCTGAAAATCTTCCCTTCTCATCTCTCTTCCCTTACACTCATGTCTCACCCTTTCATTGCGCTGATTTCTGAGTTTTTGAAGGCGAACTGCAAACCACATCAAGGATTGTGAGTTTTATAGTCGGGACATCTGAATGTAGAGGGGAAAGATGACACTAGACACAAAAGAACAGGTGAATGTTTGCTAGGTTCTCAAATTTTGACTTTAGATGGTAATGGTTGATTTTCAGGGATGTTAATTAACAAGTTACATATGCATTTTTGCAGGTGGATAATTATTGGATACATATTTGGTTGTAGCTCACTCAAAAATCGTACAAAAGGGAGTTTCTGTTAGAGCTCTTAACCCTAATTCTGGAATGCTTGGCTCCAGTGGTTGAAAAAGGGCTTCCACCTCCTGCAAGTCTACTTCCTCCTTAGCCCATGCATATACTCCGTAGAAAGAATGATGATGATTAGCAAGAGAGATAGGGAGCTTACAGAAGGCGGCGTGTGTGCTGTTTTGGTTGAAACCGTGTCCGTGATGTATAATGAAGATTGACATCTTAGCAGCACTTACCAGCACAGAATGAACGAGGTATAATACTGTGGATTAAAACATATTTCACTCTTGGATCATTTTCCCATTGATCAAGAAAGCTTTTGTACTTAACCTGCATTTCTGCAACAAATTAAATACACACGAAGGTGGTAAATCAAGTGGCATAAGTCGCGGTTAGCGTTTTTACTTGTAACTGTCCAAGTCCATATAATTCAACTGCAAACGTTGAATCCATGGCATTGAGACCTTTGGGACGATGAAGATTCAAGAGTAACGCCATTTGGGTAAATGGTTGTCCTTGATGAATTCTTCCGCAGCAGAAGCGGAAGCCATGTGCAAAAATGAGCTAAATAAAGATGATTTTTAGAGACAAATTATAATAACTGCTAAATTTCCACTTTTTTACCATCTTTAACATAATCACAAATTTAACAAAATCTTATTTCATACATCTTAATAACTCTTTTTATATATGTATTAATTATAATAAGTTACATGCTTACATTGAAAGTTTATAAATTTTGTTCTTTGAAAGTTTGAACTAATTTTGTAATTTTAGTGAAACGGATGAAGTTTATGTCAAGACTCAAGTCAAGAGACTAGCAAATGAAAATTAGCCGTTTGCATAAAGTTCGTGTCGAGTCATAGGATGAACTAATTACAAGACACATTGGTAGGAAGGCCAAAATTGCTATGATTTTTTCAGGCAGAGTTTAAGTTTCAAGTTAGGTATGTG

mRNA sequence

ATGAGGCAGGGAGAGGCTTTGGGAGTTTCCCGAGGACCGTTTTGCCACTCTCCCTTGAAGACCACCTTCTACGGTGGTCTTCTTCAGCCGATGAGTTCTCCGACCACCGTCAAAACGGTCCTCATCCCGCGGGAAAGATTAACGGCTTCTCTTTCTTACTACTACTACGTACTGTACTCCGTATTAATTTCTATTCTACTACTACAACTACTACCCAACCTTAGTGTTCAGTTTGCCGCTAAATGGGTAGATTTTGCTCCCCTTGAAATTCTCCCCCGAATTGTTTTGATTAAATGCAGATCTGAGCCTCCTTTCCTTCCACCCTTTCTGGGGAATTTTAATGTTAGGTATATATCAACTAAAGAGGGGGCTTCACATCGATTATCTGATGATAAGTATGTTCCCTGCCATGTAAATTTTCATGGTGAGGGTCTTTGTTCGGCAACACAGAAGGGGTTTATGATTTATCAAAAACATGATGAGTTTAAGAATGAGGCTGGGAGAGGCTATGGGAGTTTCCTAAGACCATTTTGTTCCTCTCTTCTGATGACCAACTCTACTGGCAGTCATCAATAGCCCATGATTTCTCCAAACACTCAGAAAATGGTCATCAGAGAAAAGGCTGCTGAGCCAGTTTCTTTTATTTGAGCATTCTTCTTCTCTTATGCAACTTCTCCGGAATCTTATATTGCTCTGTCTTTTCCAGTTCCATCTAAAGAGGTTGTCCTTCCTCCATCCAAATTGAGGATTGAGGATCAAAGTTTTCCAGAAATCCAATTTCGTAGTTACTCGCTCTGTCTTTGGTGAATCTTGTCTCAATTTCTTTCATTGCTAACTCTTTCAATTTGGATTGATTATTAGAAAAAAAAAAAATCAGACCCCCCTTGGTTAGGAACTTATGACAGAGGCTGGAGAGGCTATGGGAGTTTCTGTGGACCGTTTTGCCCCTCTCCTTTGATGACCACTTTTACCAGCGGTCATCTATATTGCAAATGATTTCTCCAGAACCAGAAAATGGTCCTTCAACTTGAATAGGGAGTTCCCAGTTGAGAAAGATGAATACGAAGCATGTGGAGTCTAGTGTCGTTTTTAAACTAATTGGAGGCAGTGATGATCATAGACCAAGGGCCTGTTCTTTTCACCTGTGAAACTTTTACTTATCTGAGCTTTCTGAACTGAACTTATGTATCTGAAGTTTCTGAACTGAACTTATATATCTGAAGTTTCTGAACTGAACTTATATATCTGAACTTTTTGAACTGAACTTATATATCTGAACTTTCTGAACTGAACTGTATGAACCTATTGAACATGGAACTTTTTAAGGTGAAAAGAACAGGGCTGCAGTAATCAGGCTCTTGAGAAACGGCCTAGAGGGTCTTGCATGTGCTTGGCAGGGCAGCAAATGGAACTCTTAGTTTATGAGTTTTGCCTGCTTTGCCGCCATTGCTTAACCTTAAGGCCCCTTTCTATGCCTGATGAAAGCGAATCTGAGCCTTGTTTTTCTCACAAAAAAATTTGTGGGGGATGGTTTCATTGGTTTAGTGGGGGCATAGAGGTAGAGGTTGTTTTTTCTCTTTTCACAAGTTTTGTGTCTTCATGAAATTTTCATGAAATGTTCCAACTGTCAGCCAAAGTGCTAACCACGGAACTAACCAGTGTCTAATTCTGATAAGGGGAATTCAGGTGAAAATAAGGAAGCCTCTCTTTGTGCATGTTTGTATTGGTTCTAATTATTTCCTGCCCTTGTTATGATTTCATCATGTATGAAAAGCTTATCTGAAAATCTTCCCTTCTCATCTCTCTTCCCTTACACTCATGTCTCACCCTTTCATTGCGCTGATTTCTGAGTTTTTGAAGGCGAACTGCAAACCACATCAAGGATTGTGAGTTTTATAGTCGGGACATCTGAATGTAGAGGGGAAAGATGACACTAGACACAAAAGAACAGGTGGATAATTATTGGATACATATTTGGTTGTAGCTCACTCAAAAATCGTACAAAAGGGAGTTTCTGTTAGAGCTCTTAACCCTAATTCTGGAATGCTTGGCTCCAGTGGTTGAAAAAGGGCTTCCACCTCCTGCAAGTCTACTTCCTCCTTAGCCCATGCATATACTCCGTAGAAAGAATGATGATGATTAGCAAGAGAGATAGGGAGCTTACAGAAGGCGGCGTGTGTGCTGTTTTGGTTGAAACCGTGTCCGTGATGTATAATGAAGATTGACATCTTAGCAGCACTTACCAGCACAGAATGAACGAGGTATAATACTGTGGATTAAAACATATTTCACTCTTGGATCATTTTCCCATTGATCAAGAAAGCTTTTGTACTTAACCTGCATTTCTGCAACAAATTAAATACACACGAAGGTGGTAAATCAAGTGGCATAAGTCGCGGTTAGCGTTTTTACTTGTAACTGTCCAAGTCCATATAATTCAACTGCAAACGTTGAATCCATGGCATTGAGACCTTTGGGACGATGAAGATTCAAGAGTAACGCCATTTGGGTAAATGGTTGTCCTTGATGAATTCTTCCGCAGCAGAAGCGGAAGCCATGTGCAAAAATGAGCTAAATAAAGATGATTTTTAGAGACAAATTATAATAACTGCTAAATTTCCACTTTTTTACCATCTTTAACATAATCACAAATTTAACAAAATCTTATTTCATACATCTTAATAACTCTTTTTATATATGTATTAATTATAATAAGTTACATGCTTACATTGAAAGTTTATAAATTTTGTTCTTTGAAAGTTTGAACTAATTTTGTAATTTTAGTGAAACGGATGAAGTTTATGTCAAGACTCAAGTCAAGAGACTAGCAAATGAAAATTAGCCGTTTGCATAAAGTTCGTGTCGAGTCATAGGATGAACTAATTACAAGACACATTGGTAGGAAGGCCAAAATTGCTATGATTTTTTCAGGCAGAGTTTAAGTTTCAAGTTAGGTATGTG

Coding sequence (CDS)

ATGAGGCAGGGAGAGGCTTTGGGAGTTTCCCGAGGACCGTTTTGCCACTCTCCCTTGAAGACCACCTTCTACGGTGGTCTTCTTCAGCCGATGAGTTCTCCGACCACCGTCAAAACGGTCCTCATCCCGCGGGAAAGATTAACGGCTTCTCTTTCTTACTACTACTACGTACTGTACTCCGTATTAATTTCTATTCTACTACTACAACTACTACCCAACCTTAGTGTTCAGTTTGCCGCTAAATGGGTAGATTTTGCTCCCCTTGAAATTCTCCCCCGAATTGTTTTGATTAAATGCAGATCTGAGCCTCCTTTCCTTCCACCCTTTCTGGGGAATTTTAATGTTAGGTATATATCAACTAAAGAGGGGGCTTCACATCGATTATCTGATGATAAGTATGTTCCCTGCCATGTAAATTTTCATGGTGAGGGTCTTTGTTCGGCAACACAGAAGGGGTTTATGATTTATCAAAAACATGATGAGTTTAAGAATGAGGCTGGGAGAGGCTATGGGAGTTTCCTAAGACCATTTTGTTCCTCTCTTCTGATGACCAACTCTACTGGCAGTCATCAATAG

Protein sequence

MRQGEALGVSRGPFCHSPLKTTFYGGLLQPMSSPTTVKTVLIPRERLTASLSYYYYVLYSVLISILLLQLLPNLSVQFAAKWVDFAPLEILPRIVLIKCRSEPPFLPPFLGNFNVRYISTKEGASHRLSDDKYVPCHVNFHGEGLCSATQKGFMIYQKHDEFKNEAGRGYGSFLRPFCSSLLMTNSTGSHQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17397.1Spo17397.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17397.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17397.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17397.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17397.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016311 dephosphorylation
biological_process GO:0006651 diacylglycerol biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0046520 sphingoid biosynthetic process
biological_process GO:0009860 pollen tube growth
biological_process GO:0009846 pollen germination
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0048868 pollen tube development
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0047874 dolichyldiphosphatase activity
molecular_function GO:0008195 phosphatidate phosphatase activity
molecular_function GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression