Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTTCTGTTTTTGTCTTACCTAAAACTTATAATTAGGTAGAGAATTGTTCTTGGAAGTAGTTGAGAGGAAGTAGGATTTATACTGCAGAGTATTATTGGGAAAAAATTGATTCTTGTAGAATTCAGAGGTTTGATTTTTTGGTGGGTGGAGTTGATTTGGAGCTCTTGATTTAGCTGTGTGAATTATGTCTGGTGGGAGTGGAACTCCTGTTGGAGCTAATTTCATGAGGCAGAGGCATAGCTGGGGTTATGCCTCCGGCGGGGATGATCTCGAAGATGATGCATGTTCGAAACCAATGCCTTCAACGCCTTCGATTCCTAGAGCTAAGACATGGATTGAGATCATGGAGAATGTTCTTTGGATCGGTTCAGCAGTATTTATCATATATTTTGGTGATTGGCATTCAAATCTTGTGTATGTCCTGTGGCACGATGATCGGATTAGGAGGTAAATTCATCTGCCTGAGATCTCATGCTTACTAGTAATTCTTGATTTTCGATATTTTAATACATCGCTTTTGGCTTGTGATGTTCTTGTACTCTTAATCCACTTTACTTTAGGTCCTTATATCTAGATTCACTTTACTTTTGAGCTTTTTGGCTTCACAAGCATGATTATGGATTTGGCATTTATGTATGGAACTGTGGATAGAAAAGCTCCAAATTTGATTTGTCTCACAGCTGTCTTGTGATTAAGGCTCTTGGAGTTGCTTTAAGTTCTTCTAATACATAAGATGCCTTGAGTGGCTTTATAAGCATTGACTTGTTGCCTTTTTTTTTTGTGCCAAAAAAACTATCATGGACAAATAGTATTTTTCCTGTGTAGATGCAAAAAAGGAGAATTAGGGGAACAATACCATGTTTATAGCTTATTGGCCTAGCATTCACTGTATCTAATGCTTTGGCATCTCCTCTACACTTTAAACATAGAGTGAACTTAGAATTTTTGTTCGCTTTCAGTATTTCTCAAACCTTAATTAACTAATTCTAAGTTATCATGGGCGGGCATGCCTGGACGAGCATGCAGACACAGTTTTTGGGTGGTTTTATCAACCAGCCGGTTTTTGTGGTGAGCTTAATACAAGTCCTTCTAGCTTCCTTTGACAGGCCTGTTTTCATCCTACATGGTGTAAGGTGTAACTTATCATCAAATTGCCTTGAAAATTTTGACCCATGAATGCAATATGTTGATTTTGCATAGGCCGCCTACCATGTTCCTAGAAGAGAAAGTAATTGGGCGATGTATGGTAAATCTAAATTAGATGTATGTGAAGTTGAGTTGTGTGACTGTCAGAGAATTGTACCTGTTCTTGACAATTGATTTATAACCTCCGTGTCCTTACCAACAATGTTGTAGCATGTCCTACAATTTTGTGATGATATGCTGCATATATCCAACTGAAAATTGGTGGGAAAAACATTTTTTTGCAGAGAGGAGTAATTAAAAACTGTTCTCACTCTTGAATATCTACAATTCATCGTATTTTTTGTTTTGGGAAAATAGATGAGGATGGATTCTCAGCAATTTAATTACAGTCGTGTTGCCAGGGTTTGTTTTACTACCCAGCAAAGAGTTGTGAACCCCATGTGCTTTTTCTAGTAGGATTAATCTACATTCAACTAATCAACTTGACTTATGACTTGGCCAAATGGGCTTCTGTGCCCCTTTTTAATAATAATAATCAATATTTTGTGCAGGCAGTAGTCTCTGACCCTCTATGTTGGCCAAAGTTCATAAGGGATATCGTGTTGAAATAACTTTATGCACTTTTGTTCATTGTTTTTCTCTTTATCAAAGTGGTCCAAAAGCATCCTCCATTCTCAGTTTGCATTTCTGTTTTACATTGAACTATTGAAGACATCCGTCAGTAAACCAACTTTACTTTCCTTCTTCTAACTTGGATTTAGTTTTCTCCAGAGCATAAAAATATTAACTAAATACAATGCTACAGTTAGTTGTATTCGAGTTACATCCTAGAAACAATATATCAGTGTTCAAGGTGTCAATACAACCTGGTGCAGGACTAGCAGGAGACAATTCATACTTATAAGGGCCAAGTTTTAGACCAATTGGTTGCCTGGTACTGTCCTTTCCTTCCACGATCCTTGTCCCAGTAATTTTTCTAGTGGTAGCATCCCAGCTCATGTGACAGAGGCTTTTCCTTTCTCTATAGAATTCTTTCATCCCACAAGTATATTGCAACATTAGGCTTGTTTTATTTGGAGCAGCCTATACCGTAGTTGAAGGATATCATTGTTTTACGATACTTGGTAGGCTGAATTGATCCCTTCCTTGGCTAGAGGCCTAGAGTTCCATACAGGCTGCCTCCACAGCTCCCTAATTCTGAAGGCAAATTCAATTGCACAACAGATAGAGACACTTTGTTTTCTTATTGCAGAGATTGATTAAAACAAGGGATGGAGAGATGATAATAAGAAATTGTCCTATAGAGGAATGAGCAGACATACTTCCTTAGCCCTTGGGCATTCCCTCAAATAGTGCAAGGTATATTCTTTATCATGGGGAAAACGTTAGATGATAGGGCCTTCCTTCTTTCTTCTAGGTCATTAGTGATCAGTGGGTAATTTTTCTTAACTACTCCCTTCATCCCTAAAAGATTGCCCCAAATGCTTTTATTCACTTTATGGAACTGGGCATTCCCAAAAAGCAAGTTGGTAAATATATTTGTCTTTAACTTAAATTAAATAATTGTGTGTGAGGAGAGACATGTAAGGACCACAACCCATATAAGGTATGGGGCTAACAAATAAGGATATCCATTTATTGTATGCGGTGCAATCTTTTAGGGACGGAGGGAGTATCAAGCAAGGACATGATAATTTGATTTGGGAGGACAATTAAACTCCTAGATCCTATCATGACTATCAGAGGAAATTGTAGGTTTTTTAAACCTCAAAGTATTGGCCTAAAGCTAAAATACAGACACGTAATCATGCCCAAACGGGGGGGGGGGGGGGNNNNNGGGGGGGGGGGGGGGGGGGTATTGGAATAAAAGAGATAAGAGAGTTTTAGGGGGAAGGGTATCCTTTTTCTTTACGGCTTAGTCGTGCCTCATTATTGTTTATGTTCGCTACTCTTGGAGCTTTCCTAATCTATTATCTTCATAATTAAGATAGTCTAAGCCCCCCTCTATGTTGAACCAAGTATGTGGTTTCATAAGAAATCATTTTCTGGCTTGAAAGTGTTGGTGTAACTCCATCTGTTCCTCCCCCCTCAAAAAATAAAAAGTTCCATCCGTTTCTAGCCATTTTTCCTGATGTTAGGTGACATCATGTTTAGTTAAAATGTAATCCCTCCGTCCTCTTTTTTTTTGCCCAATGAGGGTCTTGTTACTTTTTTTAATTTGGTTGGATGGAGTTGGTGAGAGATAAAATCCCACCTAGACATTTTAGAACATGTTCATTGAGGGTCAAAGAGGGAGAAAATCAAAATTCAACTCTACCGCAACAGTGGGGATCTTGAATGGCTCTTGAGTTTCAGGACGGCTCTTGGCTAAGCAGCACTTTCTATTTCTTGAGAACTAGCTCTATCTCTAATTGTGTGACAAGTGTCCAAGAAGGACCATGACTCTACAATATTTTTTCGGCGGTAAATTTACATGGAGAAACACTCACCATTTTTGGGATTATTTGTATATGTATCTTGAGGATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAGATCAGATCAGATCAGATCTCTTCTCTCTCTACAAGATATATATCCTAAAAACCCTAACAATTGTGACTTCGTGAGTTCCATGTAGATCTACCGGTGTGTGGGCCAAAAAAATATATTTCGTTGTCACGTAACTAGAGATAAAGCTAGATCCCAAAAACAAAAAAAGAGACTCTTTACGAAGAGCTACTCAAAATCAATTCAAGATCCTAGATCCCTTTTGTTGTGGTAGTGTTGGTTCTTGATTTTCTCTCTTCCTGTGGTCTTGGAAAGCTACTTCAAGAGCCCTGATAAACATACTTTACAGCATGTCTGATTTTGTATATATTGTATGGAGCCCATATTTAAGACGTACCTCTAAATACTCCTAATCTATAACTATCTCAATATTCTTAATTTGGTTGCACCAGTAGGAACTTGGAGTAGATGTGTCACCTCTCTACAAAGCTGTAGGAAAGAAAAAGGCTATCCTTCCTCTTTGTTCGATCTTCACATTTGCTCCATCCCTAATAATCTCCATGCTTGAATATGGCTTGGAGATTAGATGTGGACATGTGGTTTTTACAATTTAAGATAAGAAAATTCGAAGTTGATAAATAGGTAATACGAAAGTCTTGGAGGAAGAGAGAAGAAATGTTGATGGATGAAGAGGGAAAAGTGGATGTTGTTATTTCACATTTAGACTTTAACTTGAAATGAAAGTGTGAAATTTATGTTGGGTTATCCTTGTAATAATAAGAGTAAAGTGTTTTATTGAATCATAACAACTTAGAACTATATTTCTGGTGAAGTGGTGATTTTTTATGTGCTCCCCTCTATATTCCCGTAATGGGGCTGGCTTCTAGACTACAATCACTTTCAGAGAGAAGCAAAGTTGAGTACTGGAAACTGGAAAGTGCATAGTTAGTGCATTACTTGAATTGGAGAGTAGATCCCTGGCCAGTCTTGGTTAGTGCATTTATGAAATGACTAGATCTTGACGAAGACAAGACATGCGAGGTCTTTGTATGTTGTAACTTTTCAAGATCTGATTTTTCCCTTTTCCTTTTGCAAATCAAGAGAGCAAAAGTTCTTTTTCTTTTACTAACACAGAGGCTGTATGTTAGTGATGGGTGAAAGATTGTTTTCTGGACTGTTCAAGTTGCTGTCAGAGTCATTGTTTATTGAAAATATGGAGTCATTCTTTCAACATATATATCACTTTCTTCACTATATCTCTTTCGATGTGATCATCTAACAAGTACTCCCTGAACCTGAACCAATACCTTGATCATGATTTTTTATGTTATTGCTTTAATACTTGTGCTGGATGGAGGTGATGTGGAATTCATATGCCCTGAGTTAAACTGGCTAGAATATTTACATACACTACGGTTCCAGCTTCTGGATTAGTCCTGCAATGAGCGCAACCCTCGTGTATAGTTGCCTCATATTCTCTAGGCCGATCCTGACTGTTATAAGTACTTCATCCATTGTCATGATGTCATGGCCTGTATAGACAACAACTTATAACCACCATCGATGTTATTTGGAAGGTAGACATGTTTTGGAGGTCCTATACCCTAATTTTGCCTGCATTGCAGTAGTTCGTCTAAGTTTATATAGGTATAATTTTAGGTCAGTCTTGGAGAGCTCGCGTACATATTAAGTTGAGTGTGTGAACATCCCTTCTCATCTGTTTTGACATTAATTTTGTTATGCGTGTATTTTTTTTTTTCTGTTTGCTTGAGTCGTCTCTTACTGTATACTGATGGCCTGAATTCTTTTGATGGGTCCTAGTATTATACTTGTTGCACACATTGTCTAATCTCATCCGAGTTCCGGCCTGATTTGCTTTCTTATCTTGCAGGATACCCTTATACCTAGGGTTTGGAGGTGTTCTTTTGAGTGCTGCTTATTTCTTTTTTACGAGCATGTCAACATCGAGTTTTAGAAAATCGAATGAGAACTGGGACATACTTGGTGCATCTGCGTTGCCATTGGTTACTCTGCTGGGCGTAACTTCTTTTTGCCTGTGAGTAGGGACAACGATATTATTTTGGCATATTCGTGAAATTACTCTTAAATATGTGCTTACTTAAGCTGGGTCTATTGCAGATTCACGTGGGCTTTGTGGCCGATTTGGAGCTTCTTAACCTTACCTCTTGTGGTATGTTTTCATTCCTTTCCTCATCATAACACCCCTTGGCCCCTGTGCAACAAAAAAACCCTAATTTAATTTGTCATGCTCATTCTGCAGTTCACACTCTTCATGGCCTGCATGGTTATATCGCCTTATTTGATTAGTGGGACAGTAAAGTCACAACCTGAAGTGCTCCGCCTGGATTGATGGTTGATCTGTTGTGAGAATTTCAGGCGAATGGCAACTTGAAAACCTAATCTCTCTATGATGCAATCCTTCCCATGTTGGTGCTAACCACTATATTGGCTCTGTTCTGATCTTAACATGTTGTTCGTGTTGTGTTTTCTTTACTTAGCAGGCCAATTGAATGAAGGGATTAGTTTTAAATAGGCCTACATTGTGTTTGCCAGATCTCACAATGAAAAGGGTGTTTTTTGTTATTTTGTCTATGATCTAGCACAGCACCTTCTGTAAAGAATTATCAAATATAGTGTGTCTTATGAGTTTCTCTCCATGTTTTCGGGAGATTATTTAGCGCCATTGGATAAATATGCAACATATTTAGCTCGGGCCAGCCAGGCGCTGATACGCCAATTACAGCAATTTGCGCCTCTGGATCCAGTCGTATATCCTATGAAAATCTCAAATTTTGTCCAAAATGTATCTCCTTTCTCGTTCAAATTCACTTATACTGATTTTTTCACACAGTTTGCCTGATGATTTTACATGAAACGTTGTTGTTTGCTTATTATTAAATTTATTATTATTATTACGTAC ATTGTTCTGTTTTTGTCTTACCTAAAACTTATAATTAGGTAGAGAATTGTTCTTGGAAGTAGTTGAGAGGAAGTAGGATTTATACTGCAGAGTATTATTGGGAAAAAATTGATTCTTGTAGAATTCAGAGGTTTGATTTTTTGGTGGGTGGAGTTGATTTGGAGCTCTTGATTTAGCTGTGTGAATTATGTCTGGTGGGAGTGGAACTCCTGTTGGAGCTAATTTCATGAGGCAGAGGCATAGCTGGGGTTATGCCTCCGGCGGGGATGATCTCGAAGATGATGCATGTTCGAAACCAATGCCTTCAACGCCTTCGATTCCTAGAGCTAAGACATGGATTGAGATCATGGAGAATGTTCTTTGGATCGGTTCAGCAGTATTTATCATATATTTTGGTGATTGGCATTCAAATCTTGTGTATGTCCTGTGGCACGATGATCGGATTAGGAGGATACCCTTATACCTAGGGTTTGGAGGTGTTCTTTTGAGTGCTGCTTATTTCTTTTTTACGAGCATGTCAACATCGAGTTTTAGAAAATCGAATGAGAACTGGGACATACTTGGTGCATCTGCGTTGCCATTGGTTACTCTGCTGGGCGTAACTTCTTTTTGCCTATTCACGTGGGCTTTGTGGCCGATTTGGAGCTTCTTAACCTTACCTCTTGTGTTCACACTCTTCATGGCCTGCATGGTTATATCGCCTTATTTGATTAGTGGGACAGTAAAGTCACAACCTGAAGTGCTCCGCCTGGATTGATGGTTGATCTGTTGTGAGAATTTCAGGCGAATGGCAACTTGAAAACCTAATCTCTCTATGATGCAATCCTTCCCATGTTGGTGCTAACCACTATATTGGCTCTGTTCTGATCTTAACATGTTGTTCGTGTTGTGTTTTCTTTACTTAGCAGGCCAATTGAATGAAGGGATTAGTTTTAAATAGGCCTACATTGTGTTTGCCAGATCTCACAATGAAAAGGGTGTTTTTTGTTATTTTGTCTATGATCTAGCACAGCACCTTCTGTAAAGAATTATCAAATATAGTGTGTCTTATGAGTTTCTCTCCATGTTTTCGGGAGATTATTTAGCGCCATTGGATAAATATGCAACATATTTAGCTCGGGCCAGCCAGGCGCTGATACGCCAATTACAGCAATTTGCGCCTCTGGATCCAGTCGTATATCCTATGAAAATCTCAAATTTTGTCCAAAATGTATCTCCTTTCTCGTTCAAATTCACTTATACTGATTTTTTCACACAGTTTGCCTGATGATTTTACATGAAACGTTGTTGTTTGCTTATTATTAAATTTATTATTATTATTACGTAC ATGTCTGGTGGGAGTGGAACTCCTGTTGGAGCTAATTTCATGAGGCAGAGGCATAGCTGGGGTTATGCCTCCGGCGGGGATGATCTCGAAGATGATGCATGTTCGAAACCAATGCCTTCAACGCCTTCGATTCCTAGAGCTAAGACATGGATTGAGATCATGGAGAATGTTCTTTGGATCGGTTCAGCAGTATTTATCATATATTTTGGTGATTGGCATTCAAATCTTGTGTATGTCCTGTGGCACGATGATCGGATTAGGAGGATACCCTTATACCTAGGGTTTGGAGGTGTTCTTTTGAGTGCTGCTTATTTCTTTTTTACGAGCATGTCAACATCGAGTTTTAGAAAATCGAATGAGAACTGGGACATACTTGGTGCATCTGCGTTGCCATTGGTTACTCTGCTGGGCGTAACTTCTTTTTGCCTATTCACGTGGGCTTTGTGGCCGATTTGGAGCTTCTTAACCTTACCTCTTGTGTTCACACTCTTCATGGCCTGCATGGTTATATCGCCTTATTTGATTAGTGGGACAGTAAAGTCACAACCTGAAGTGCTCCGCCTGGATTGA MSGGSGTPVGANFMRQRHSWGYASGGDDLEDDACSKPMPSTPSIPRAKTWIEIMENVLWIGSAVFIIYFGDWHSNLVYVLWHDDRIRRIPLYLGFGGVLLSAAYFFFTSMSTSSFRKSNENWDILGASALPLVTLLGVTSFCLFTWALWPIWSFLTLPLVFTLFMACMVISPYLISGTVKSQPEVLRLD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04662.1 vs. NCBI nr
Match: gi|902210933|gb|KNA16574.1| (hypothetical protein SOVF_088030 [Spinacia oleracea]) HSP 1 Score: 389.8 bits (1000), Expect = 2.700e-105 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Spo04662.1 vs. NCBI nr
Match: gi|731353367|ref|XP_010688028.1| (PREDICTED: uncharacterized protein LOC104902062 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 346.3 bits (887), Expect = 3.400e-92 Identity = 168/191 (87.96%), Postives = 178/191 (93.19%), Query Frame = 1
BLAST of Spo04662.1 vs. NCBI nr
Match: gi|661885767|emb|CDP10384.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 266.2 bits (679), Expect = 4.500e-68 Identity = 125/189 (66.14%), Postives = 152/189 (80.42%), Query Frame = 1
BLAST of Spo04662.1 vs. NCBI nr
Match: gi|225445452|ref|XP_002285091.1| (PREDICTED: transmembrane protein 128 [Vitis vinifera]) HSP 1 Score: 263.5 bits (672), Expect = 2.900e-67 Identity = 126/189 (66.67%), Postives = 154/189 (81.48%), Query Frame = 1
BLAST of Spo04662.1 vs. NCBI nr
Match: gi|976915336|gb|KVI01298.1| (hypothetical protein Ccrd_020433 [Cynara cardunculus var. scolymus]) HSP 1 Score: 260.0 bits (663), Expect = 3.200e-66 Identity = 123/190 (64.74%), Postives = 148/190 (77.89%), Query Frame = 1
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC28_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088030 PE=4 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 1.900e-105 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EIR9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194730 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.400e-92 Identity = 168/191 (87.96%), Postives = 178/191 (93.19%), Query Frame = 1
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Match: A0A068UQ49_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031093001 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.100e-68 Identity = 125/189 (66.14%), Postives = 152/189 (80.42%), Query Frame = 1
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Match: D7TBZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g05040 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.000e-67 Identity = 126/189 (66.67%), Postives = 154/189 (81.48%), Query Frame = 1
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Match: A0A103Y2F3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020433 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.200e-66 Identity = 123/190 (64.74%), Postives = 148/190 (77.89%), Query Frame = 1
BLAST of Spo04662.1 vs. TAIR (Arabidopsis)
Match: AT5G20120.1 (unknown protein) HSP 1 Score: 222.2 bits (565), Expect = 2.600e-58 Identity = 108/190 (56.84%), Postives = 143/190 (75.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04662.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04662.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04662.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo04662.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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