Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGTGTCTACAGCATAGACAAGCTTTTGCCTCACCAAGTTTATTACCCCCCCTTTCTTCTCCCCATCCTCGTCCTCTCATCACGTGCAGTTGGAACTCTCTCTTTCCATATTTCCCGATCAAATGCAACGTGCCCTATGGCTATGGTGGAAGAGCTCAGAAACGTTTGCTCAGATCTTACCGTTCAATTTACTTCAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAATCAAGTGATGGCAGTAGCTCCGACCTTCTGTGGTCGAGGTTTGAAGAAGCAGTAAAGCTGTTGAATGAAAGGGAATACTATGCTTGCCATGACTTGCTTGAATCTCTGTGGTTTGAATCAAATGACCCTCTGCGTACCCTTCTTCATGCTCTCCTCCAATGTGCCGTTGCCTTCTATCATCTCTTCAACCAGGTGACATTGCATCTTCCTCATCACCTTCTGTTTTTCTTCAATCCCCTCTTTTCTGTTACCTCTTCTCTAAAACTAAATGTCATTATTTTACCTCTGTTTGCTTGAATATCTGACTAATTTCTACTTTAGACTAGTTAAAATCGCAATCTTCAAAGTGTTATAGTTCTGAAGCAGCTTCTTTTGAAATCTGAACATCAGTTTGCAGATTGTCCGGATAACTTGTCATACTTGAGGATATGACAAGATTGACAACCCTAATAATGATCATAATTTCTTTGAATCCTTTCCTATGTTGATCACTTAATTTAAGTAAGTAATGATGTATTATTATGAGGGTGACATGCAGAATCACAAAGGAGCAATGATGGAAATGGGAGAGAGTGTATGCAAGCTGAGAAAGCTGAATTTAGAAGCGGGACCCTTTCATGAGTTTGAGAAAGACCTCTCAACTGTCCTCAATTTCATCTATCAAACTCAGTTAGAGCTTGCAGCCTGTCAGTTCTTACATCAACTTCTTTTTTATTTGAAACATCTTTTTATTCTTCTTTTCACATTTCATTTAACATAATAATGAATCATATAACAGGCACTGAAGACTTTTGCTTGACTATGGAACAAACAGAAAGATCGTACCAACTTCTGGAGGGGTTCGGTGCTGGGAAACACCTGTATTTCCTTGAAGAAAGTGATGATGATGATGGTTATAATAACCACATCACATACCTAGTCTTTGATCCTCAGAAAAGCTACGGTGCCACAAACCTTCCTACAACAAAGGTTAAACTTCCCATCTTGGAAGCAACTCGAAACCATCTCATGTCCTTCCAAAACTATTGATTTGTCTTTGTGGATCCATTAAATTAAGTATACCGTTATATACTACGGAGTACTTCCTTTTCGTAATTAGTTGTTTCATTACTAGTTAGAATTGTACTTTTAATGCAACAATTTATTCTTGATTGAAGGTCATTGAGATGAACTAATGTTAAGTCCTACTTTAAGGTTTGCGATGAGTAACATTCCCATAGCATTCATAAAACCAAAAAAGAGGTTCTTCTCCTTTAAGAGGAGACTTCAAGTTTCATTTGTCCTCGTCCGTGATGTTATTTTCCTGCCACGTTTTTCAAGCTACACATGTTGTCTCAGAATCATCTCAGTGTCAACTACCCAAGTTTCACCCTAAGTGAAAGGAAAAGTGGAGAGCAATCGTATTGTAAGCTTTGGCACGCTAGGTTTGGTAACACAAAAATCTTAAAGTCAAAACTTTCCTATTCTCCCCTCAAAGACTCAATACCCATATCAACCAATTGATTTTTCTAAAGGCTCAACATGAACGAGCACTTGCCGCTTTTATCAACAAAGTTTTTTTCGACATCCAAGAACAAGATCGAGGAAGATTTAACTAACAAT ATGCTGTGTCTACAGCATAGACAAGCTTTTGCCTCACCAAGTTTATTACCCCCCCTTTCTTCTCCCCATCCTCGTCCTCTCATCACGTGCAGTTGGAACTCTCTCTTTCCATATTTCCCGATCAAATGCAACGTGCCCTATGGCTATGGTGGAAGAGCTCAGAAACGTTTGCTCAGATCTTACCGTTCAATTTACTTCAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAATCAAGTGATGGCAGTAGCTCCGACCTTCTGTGGTCGAGGTTTGAAGAAGCAGTAAAGCTGTTGAATGAAAGGGAATACTATGCTTGCCATGACTTGCTTGAATCTCTGTGGTTTGAATCAAATGACCCTCTGCGTACCCTTCTTCATGCTCTCCTCCAATGTGCCGTTGCCTTCTATCATCTCTTCAACCAGAATCACAAAGGAGCAATGATGGAAATGGGAGAGAGTGTATGCAAGCTGAGAAAGCTGAATTTAGAAGCGGGACCCTTTCATGAGTTTGAGAAAGACCTCTCAACTGTCCTCAATTTCATCTATCAAACTCAGTTAGAGCTTGCAGCCTGCACTGAAGACTTTTGCTTGACTATGGAACAAACAGAAAGATCGTACCAACTTCTGGAGGGGTTCGGTGCTGGGAAACACCTGTATTTCCTTGAAGAAAGTGATGATGATGATGGTTATAATAACCACATCACATACCTAGTCTTTGATCCTCAGAAAAGCTACGGTGCCACAAACCTTCCTACAACAAAGGTTAAACTTCCCATCTTGGAAGCAACTCGAAACCATCTCATGTCCTTCCAAAACTATTGATTTGTCTTTGTGGATCCATTAAATTAAGTATACCGTTATATACTACGGAGTACTTCCTTTTCGTAATTAGTTGTTTCATTACTAGTTAGAATTGTACTTTTAATGCAACAATTTATTCTTGATTGAAGGTCATTGAGATGAACTAATGTTAAGTCCTACTTTAAGGTTTGCGATGAGTAACATTCCCATAGCATTCATAAAACCAAAAAAGAGGTTCTTCTCCTTTAAGAGGAGACTTCAAGTTTCATTTGTCCTCGTCCGTGATGTTATTTTCCTGCCACGTTTTTCAAGCTACACATGTTGTCTCAGAATCATCTCAGTGTCAACTACCCAAGTTTCACCCTAAGTGAAAGGAAAAGTGGAGAGCAATCGTATTGTAAGCTTTGGCACGCTAGGTTTGGTAACACAAAAATCTTAAAGTCAAAACTTTCCTATTCTCCCCTCAAAGACTCAATACCCATATCAACCAATTGATTTTTCTAAAGGCTCAACATGAACGAGCACTTGCCGCTTTTATCAACAAAGTTTTTTTCGACATCCAAGAACAAGATCGAGGAAGATTTAACTAACAAT ATGCTGTGTCTACAGCATAGACAAGCTTTTGCCTCACCAAGTTTATTACCCCCCCTTTCTTCTCCCCATCCTCGTCCTCTCATCACGTGCAGTTGGAACTCTCTCTTTCCATATTTCCCGATCAAATGCAACGTGCCCTATGGCTATGGTGGAAGAGCTCAGAAACGTTTGCTCAGATCTTACCGTTCAATTTACTTCAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAATCAAGTGATGGCAGTAGCTCCGACCTTCTGTGGTCGAGGTTTGAAGAAGCAGTAAAGCTGTTGAATGAAAGGGAATACTATGCTTGCCATGACTTGCTTGAATCTCTGTGGTTTGAATCAAATGACCCTCTGCGTACCCTTCTTCATGCTCTCCTCCAATGTGCCGTTGCCTTCTATCATCTCTTCAACCAGAATCACAAAGGAGCAATGATGGAAATGGGAGAGAGTGTATGCAAGCTGAGAAAGCTGAATTTAGAAGCGGGACCCTTTCATGAGTTTGAGAAAGACCTCTCAACTGTCCTCAATTTCATCTATCAAACTCAGTTAGAGCTTGCAGCCTGCACTGAAGACTTTTGCTTGACTATGGAACAAACAGAAAGATCGTACCAACTTCTGGAGGGGTTCGGTGCTGGGAAACACCTGTATTTCCTTGAAGAAAGTGATGATGATGATGGTTATAATAACCACATCACATACCTAGTCTTTGATCCTCAGAAAAGCTACGGTGCCACAAACCTTCCTACAACAAAGGTTAAACTTCCCATCTTGGAAGCAACTCGAAACCATCTCATGTCCTTCCAAAACTATTGA MLCLQHRQAFASPSLLPPLSSPHPRPLITCSWNSLFPYFPIKCNVPYGYGGRAQKRLLRSYRSIYFKEEEEEEEEEESSDGSSSDLLWSRFEEAVKLLNEREYYACHDLLESLWFESNDPLRTLLHALLQCAVAFYHLFNQNHKGAMMEMGESVCKLRKLNLEAGPFHEFEKDLSTVLNFIYQTQLELAACTEDFCLTMEQTERSYQLLEGFGAGKHLYFLEESDDDDGYNNHITYLVFDPQKSYGATNLPTTKVKLPILEATRNHLMSFQNY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo07120.1 vs. NCBI nr
Match: gi|902196764|gb|KNA13196.1| (hypothetical protein SOVF_118910 [Spinacia oleracea]) HSP 1 Score: 564.3 bits (1453), Expect = 1.200e-157 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Spo07120.1 vs. NCBI nr
Match: gi|731334422|ref|XP_010678216.1| (PREDICTED: uncharacterized protein LOC104893775 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 347.8 bits (891), Expect = 1.700e-92 Identity = 186/272 (68.38%), Postives = 210/272 (77.21%), Query Frame = 1
BLAST of Spo07120.1 vs. NCBI nr
Match: gi|976929339|gb|KVI12190.1| (Protein of unknown function DUF309 [Cynara cardunculus var. scolymus]) HSP 1 Score: 242.7 bits (618), Expect = 7.700e-61 Identity = 137/269 (50.93%), Postives = 176/269 (65.43%), Query Frame = 1
BLAST of Spo07120.1 vs. NCBI nr
Match: gi|823136595|ref|XP_012468062.1| (PREDICTED: uncharacterized protein LOC105786248 [Gossypium raimondii]) HSP 1 Score: 241.5 bits (615), Expect = 1.700e-60 Identity = 128/267 (47.94%), Postives = 172/267 (64.42%), Query Frame = 1
BLAST of Spo07120.1 vs. NCBI nr
Match: gi|1009175309|ref|XP_015868811.1| (PREDICTED: uncharacterized protein LOC107406222 [Ziziphus jujuba]) HSP 1 Score: 240.0 bits (611), Expect = 5.000e-60 Identity = 117/213 (54.93%), Postives = 161/213 (75.59%), Query Frame = 1
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R101_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118910 PE=4 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 8.000e-158 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Match: A0A103YNB1_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009418 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.400e-61 Identity = 137/269 (50.93%), Postives = 176/269 (65.43%), Query Frame = 1
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Match: A0A0D2MEU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G231000 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.200e-60 Identity = 128/267 (47.94%), Postives = 172/267 (64.42%), Query Frame = 1
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PCM5_GOSAR (Uncharacterized ypuF OS=Gossypium arboreum GN=F383_27584 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.500e-60 Identity = 128/267 (47.94%), Postives = 172/267 (64.42%), Query Frame = 1
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Match: A0A067K6M5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14884 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.000e-59 Identity = 113/180 (62.78%), Postives = 145/180 (80.56%), Query Frame = 1
BLAST of Spo07120.1 vs. TAIR (Arabidopsis)
Match: AT2G41120.1 (unknown protein) HSP 1 Score: 225.7 bits (574), Expect = 3.400e-59 Identity = 116/214 (54.21%), Postives = 150/214 (70.09%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07120.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07120.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07120.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07120.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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