Spo12638 (gene)

Overview
NameSpo12638
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02891 : 21506 .. 24801 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGCTGGTGTTTGGAGGGTAAAGCTGGATTCTCAGGGTTCGGAAGTGTCAGTTCAAGGTCTTGGTTGCATGGGGATGTCTTCTTTCTATGGGCCTCCTTAACCTGTGGGAGACATCATTAGCTTATTCACCTTGCTATCAGCTCTGGTATCACCTTCCTCAACACCTCTGATGTTTATGGAACTCATACCAATAAGAGTCTCCTCGTCAAGGTAAACTAATAATTATCTACGTAATAGGATCTTTTAGTTCTATTTTTGAGCTTCAAATGGTTCTTTTGATAAACTTTGGTCTTGGTTTTGACGGATGTAATTTGTGGTAACTTTTTTTGGTCATCTTGATGAAATTTTGTCCTTTCCGTTTTGTGGGTAGCTATTAATTTTCGGGTGTTCGTCGTCGGTGGGGTTTTGCCTTTTTTTCCCATGTTAATATCGTTTGTCCTTTTATATCACATTTCTTGTCTTATATTCATCGTTATTTATATTTACAATCTCTACATGTTTACATTTTCACTTCTTTTTTCTCTCTTTTTCCCTTTTTCTTTTTTCCTTTGCAAATTCTTTTAAAACATCTTTGTGCCTCTTGTGTAAACCGACCGTGTTTTCTTGTTCCCTAATTTTCGTGCTTCATTACCCCTACCTTCAATTTCACTATTTCACGTGTTTACTGTGTTTAACATAACCTTTTTACTTTTCTTACTCCAAATCATTTCAGGACTAGCTGTGTGTTCTATTCACGCGATTTTCACTTATTTTTTCTAAACTTATTGTATGTGAACTTATTTGAACTTAACCGAATTTATCTGAATTTATTAGAACTTCTCAGAAATCGAGTGACCCTTATTTTTCCTAAATTTATCTAATTTGTACTTATCTGATCTTATCTGAACTTATTTTTCCTGAAATAAGTGGAAATAAGGTGAACAGAAACAAGACCGGCCCTTTGTGCATCCTTTCTGCACTCATAATCCTAACAGTTTATTTTATTTATTTTTAGTTGTCATATGGGCTGACCATCTTGGCGAGTTACTGGTAATTTGATGGGGTATTTTCTGTTTTGTGAATTTTTAAAATTTTGTTTAACACCATATTATTAAAGCTGGTCCCTGTTGGAACTTCTAGTATGATGCAGCTTTGGGAAATGGTAGGCTATCATTATGTTGGCTTTATTTGTTTATTGGGGTTTTGAATTTGTTGGGCAGGCGTTGAAAAGAGGATGGAGTAAGAAAGTATAATTGTCTACAAAATTTGGCCTCAAATATACAGATGGAGAAGAAGAGATACATGGTGAATCTGCATATGAAAGAGCTTGCTGTGAGGAAAGCTTAAATTAGCTTCATGTTAATTGCATCGACCTCTATTACCATCATTGCATTGATACCAAAATTCCCATTGAAGTCACGGTGTGTCCATCAGTCCATTGCTCTGTCCATTTTCTTTATTAGTATCCATCCATCTTTATCAATCTTACCATTCTGAAAAGATGGTTTGATTTTTCTGGTTAACTTTGTGGTTTTGCACTTAGTAGCATCGAGAAAAGCATCTGAGATGAGAAGTGTTAGGGTGAAGACAACATTAGTTTATTTGGGGGAGGATGGAAGGGGGAGGGGGGGTATATAGAATTGTGAGCATCAGGTGATGTGTCATCAATTTAAAAGGAAATAATAACTGATTAACCCTTGTATCTATCACAAGTTCACAACTCACAAGGGTGCATATAGCCCATATACTCTCGGTTCTCTAATTCAACTAATAGGTTCTCAATAATAAGAAGGATTTGGGTCAATTGAAAACTTGAAAAAGAAGAACTTGCACCTTCTTCAGTTAATGTTGAGGTGTTGTACAATAAAAATACCAAACCAAAAACACTTTGTGGAAGTCAGCTACACAGACCCGGGAAAGTAGGGATAAATCTAGCAATTCTTGGAAGAAAAGAAAATAATGAAGTTTTATGCTACTTAGAGCTACCTATCTCAGCCCCTTTCCTATATGAATATAAGAAGAAACTTTCATCTTTTTGTATTCAATTATCATACCTGTTTCTGTACTAAGCTTGCTTGATATATAACCCGTTCTCGACGTTGTTAATTTGTTATATTTGTCCTATTGTTCACATGCAGTATTAGATGGGTGAACCTAGAAAGCTGGTAGAGGAGGAGCAGACCAAAAAACACAGGTCTATCTGAAGCATCAGCTTCAACCATCAGAAGGGCACATGCGGTGCACCCTGTAACAAAGGTTCAGTTGGAATGGTCCTTGTTGACCAGAGATGCTGAGGAAGAAATAGTTCTTGCCTGCAGGTGATATGCCTGATGCTTGAAAATTCAGTGAAAAATTGAGTACTTTGGGTTGTGTATTGGAGTTCGGACCTAATTGTTTTCTAGGAAACTTGGAATTGGAATTGTGGCATAAAGTCTTCTTGGAAGGGGGTTCTTCTCTTCAGGGTCCAAGTAGAGTAAGAGCTTCTCAAACGTTGAGTTTCGACAGGTTTGTCCAACACTTATGTTTGCCGAAAAATGTATCACTCTGACTTTATACAAAACTGTTAGTGTCATCTTTTTTAATTTGGTTATATATGTATAACTTTTTAGAATAATTTGTGTCCTTATCATAAGTGAAGATTATATAAAAAACAATTCTGAATCTAGAATTTTATTTTAGCCACACAAAGTCATACCTTTATAAGAAAGTTTCATATTTTAATCTCACTTGTAAAAACTACTGTTTTCAGTTAATGTTGTTTGCCGGAAACATATTTTTCAAAACATATTTGTGCCTGTTCTTTAAATCGACCAATCTTGTTTTCTCGTTCCCTAATTTTTAGTGCCTCGTTACCCTCACCTTCACTTTCTCATTTTAGCGTGTTCACTCTCTTTAACATAACTTTTTACTTTTCTTACTTTATGTTCCGCAGACGGTTCCTTATGACGGTTCATGTTAGCCGACCCCAAATCATTTTGTGACAAAGGCTTGGTTGTTTTGTTGCTTGCTGGAGTCTAATCAATATCCACTGTGTCCCCAATTCCAAAAAGTCGCGATCCATCTTATCAGTGATGTGGAGCTGCTCAATCTAAGTAGAAATCATCTTCTCTGTAAAATGCATGGAAGATAGGAATATATTGTGCATTTGTTGTCTCGTTGCTGTATGGCATGTATCATATTATCCGAATCATTACCTTGCTTGTTATAGTATTGACCTCCAGCTACATGCTTTTAGCTTTCAGAAACTGCCAAGGTTCCAGGCAAGATAATATTGAGCATAACAAACACATACTTGAGTGGGCAGTGAAATAG

mRNA sequence

ATGACAGCTGGTGTTTGGAGGGTAAAGCTGGATTCTCAGGGTTCGGAAGTGTCAGTTCAAGGAATATATTGTGCATTTGTTGTCTCGTTGCTGTATGGCATGTATCATATTATCCGAATCATTACCTTGCTTGTTATAGTATTGACCTCCAGCTACATGCTTTTAGCTTTCAGAAACTGCCAAGGTTCCAGGCAAGATAATATTGAGCATAACAAACACATACTTGAGTGGGCAGTGAAATAG

Coding sequence (CDS)

ATGACAGCTGGTGTTTGGAGGGTAAAGCTGGATTCTCAGGGTTCGGAAGTGTCAGTTCAAGGAATATATTGTGCATTTGTTGTCTCGTTGCTGTATGGCATGTATCATATTATCCGAATCATTACCTTGCTTGTTATAGTATTGACCTCCAGCTACATGCTTTTAGCTTTCAGAAACTGCCAAGGTTCCAGGCAAGATAATATTGAGCATAACAAACACATACTTGAGTGGGCAGTGAAATAG

Protein sequence

MTAGVWRVKLDSQGSEVSVQGIYCAFVVSLLYGMYHIIRIITLLVIVLTSSYMLLAFRNCQGSRQDNIEHNKHILEWAVK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12638.1Spo12638.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo12638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
molecular_function GO:0005524 ATP binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo248410.70Barchart | Table
Spo099180.69Barchart | Table
Spo026850.68Barchart | Table
Spo020360.65Barchart | Table
Spo221750.65Barchart | Table