Spo16640 (gene)

Overview
NameSpo16640
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionArabinogalactan protein 22, putative
LocationSpoScf_03058 : 1716 .. 3094 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTAATAATCCTAATTGACGTACAAGAATTTTCAACGCGTTCCTTCCACCCTACTCTCCTCTTTCAAAAAAGATCGGAACTTCCAGATTGAATTTCCTGCTCCCTAAAATTCTTATATATATACACCACCTAAACATCACATACGCCTCTCATCATTCAACATTTCAACACCATACAAACACGAAAATTATTTCACTTACCCCAAATCATATATTTATTTCTATTTCATTTTTTTATATAGAAAAACTTAGGAATATTATTAATCAATATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTATGTCTTTTCTCCTTCAATTCGACTCCAAACCCAAATTAACCTACTATTGATCAATCAAGAGTCGAAATAACATAGATTCAACCAATAGACGATCCGGATTTAACCCGGCCAACTCCTAATTTGATGTAGAGGAGGGAGATTCGAACCTGAGATCTATTGCACATACAAACCGAAATTAGCTAATATCTCATTGGTAGATTTTTACCAATTGGATACAACTGAGTCTTTTTGAATTTTTACTTCTTTAGAAAGCACGTTTTTATTGTTTAAATGCACATTTAACCGTTAAAATCGCATTTTTACAAAAAAGTACATCCTCTTTACGAGAACAAAAAAATATATGTGCTTTTAAACTGAAAAAGAATGTTTTTTTAACCCGGTTATATGTAGAGCTACATACAACCGGATACACCTTCTAATTTGTGGATTTTTACAAGCGGTGGTAGTTATTTTCGGTTATTTTTATTGATATTGATGATTTACCGGGAATTTTTTTATTTTTGTTTGCAGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAAATTAAAATCGTGATTCAGTTTAGATTAATTTTTTTTATTTAATTTAAGTAATTATTTTTACACTTTAGTTTATATTTAAAATTAACATGAATATTATGTATAGGTCCGAGAAATTCTTTAGCTACGGGGGAAGAATTGCAGTGATTTTGTATTCTTTTCGAGTTTCTTCTAAACTTGTAATAATAAGTAAATAAAATACGGTATCTCTTTATTTATGAATTTTATTCTTTTTTGCAACCATATATTATATATATACTTGAGAATATCATTGCGATTTTATGGTTAATTACATGATTAATCATTAATGGACTAGTTAATTGCCGTATATTGAGAAATTCAACATTTGTCGAATACAGTATGTTTTCTTCTAGCTTTTGGTGAACGGGA

mRNA sequence

GTCTAATAATCCTAATTGACGTACAAGAATTTTCAACGCGTTCCTTCCACCCTACTCTCCTCTTTCAAAAAAGATCGGAACTTCCAGATTGAATTTCCTGCTCCCTAAAATTCTTATATATATACACCACCTAAACATCACATACGCCTCTCATCATTCAACATTTCAACACCATACAAACACGAAAATTATTTCACTTACCCCAAATCATATATTTATTTCTATTTCATTTTTTTATATAGAAAAACTTAGGAATATTATTAATCAATATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAAATTAAAATCGTGATTCAGTTTAGATTAATTTTTTTTATTTAATTTAAGTAATTATTTTTACACTTTAGTTTATATTTAAAATTAACATGAATATTATGTATAGGTCCGAGAAATTCTTTAGCTACGGGGGAAGAATTGCAGTGATTTTGTATTCTTTTCGAGTTTCTTCTAAACTTGTAATAATAAGTAAATAAAATACGGTATCTCTTTATTTATGAATTTTATTCTTTTTTGCAACCATATATTATATATATACTTGAGAATATCATTGCGATTTTATGGTTAATTACATGATTAATCATTAATGGACTAGTTAATTGCCGTATATTGAGAAATTCAACATTTGTCGAATACAGTATGTTTTCTTCTAGCTTTTGGTGAACGGGA

Coding sequence (CDS)

ATGAATTCCAACGGTTCATCATCACTGAGGTTTTATGTATTGCCCATTATTGGATTTCTTATGATGGCTCTTTTTAAGGTCACTCATGGTCAAACCATGGCTCCTTCCCCTGCCGCTCTTCCCCCTTCTAACGACGGTGCTACTATTGACCAAGGAATTGCATACCTTCTATTGGTCGTTGCGCTTGCCGTCACCTACATTATTCACTAA

Protein sequence

MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16640.1Spo16640.1mRNA


Homology
[Close]
BLAST of Spo16640.1 vs. NCBI nr
Match: gi|870850988|gb|KMT03054.1| (hypothetical protein BVRB_8g196160 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 95.9 bits (237), Expect = 2.900e-17
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1 

		  

Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+ KV  GQ M PSPA LPPSNDGA IDQGIAY LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAILKVAQGQMMVPSPAPLPPSNDGAAIDQGIAYFLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 68
[Close]
BLAST of Spo16640.1 vs. NCBI nr
Match: gi|870850984|gb|KMT03050.1| (hypothetical protein BVRB_8g196120 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 92.4 bits (228), Expect = 3.200e-16
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1 

		  

Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+FKV  GQ M PSPA LPP NDGA IDQGIAY+LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAIFKVAQGQMMVPSPAPLPP-NDGAAIDQGIAYVLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 67
[Close]
BLAST of Spo16640.1 vs. NCBI nr
Match: gi|661893536|emb|CDP03345.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 83.6 bits (205), Expect = 1.500e-13
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 1 

		  

Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTM-APSPAAL-PPSNDGATIDQGIAYLLLVVALAV 66
          +S R + LPIIGF+M+ALF+++ GQ++ APSPA + PPSNDGA IDQG+AY+LLVVALA+
Sbjct: 2  NSARSFALPIIGFIMLALFELSRGQSITAPSPAPIGPPSNDGAAIDQGVAYVLLVVALAI 61

Query: 67 TYIIH 70
          TY++H
Sbjct: 62 TYLVH 66
[Close]
BLAST of Spo16640.1 vs. NCBI nr
Match: gi|643724455|gb|KDP33656.1| (hypothetical protein JCGZ_07227 [Jatropha curcas])

HSP 1 Score: 82.8 bits (203), Expect = 2.600e-13
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1 

		  

Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S +  Y LPIIGF+ +AL ++ HGQ +APSPAA  PS+DG TIDQGIAY+L++VALAVTY
Sbjct: 2  SPMNLYALPIIGFMFLALLQLGHGQAIAPSPAAEGPSSDGNTIDQGIAYVLMLVALAVTY 61

Query: 67 IIH 70
          + H
Sbjct: 62 LFH 64
[Close]
BLAST of Spo16640.1 vs. NCBI nr
Match: gi|223546779|gb|EEF48277.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 82.4 bits (202), Expect = 3.400e-13
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1 

		  

Query: 6  SSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVT 65
          S+ ++ Y LPIIG ++ ALF++ + QTMAPSPAA  PS+DG +IDQGIAY+LL+VALAVT
Sbjct: 2  STPMKLYALPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQGIAYVLLLVALAVT 61

Query: 66 YIIH 70
          Y+ H
Sbjct: 62 YLFH 65
[Close]
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196160 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.000e-17
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1 

		  

Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+ KV  GQ M PSPA LPPSNDGA IDQGIAY LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAILKVAQGQMMVPSPAPLPPSNDGAAIDQGIAYFLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 68
[Close]
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNW8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g196120 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.300e-16
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 1 

		  

Query: 1  MNSNGSSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVV 60
          MNSNG   +RFY LPIIG L+MA+FKV  GQ M PSPA LPP NDGA IDQGIAY+LL++
Sbjct: 1  MNSNGPL-MRFYALPIIGILIMAIFKVAQGQMMVPSPAPLPP-NDGAAIDQGIAYVLLLL 60

Query: 61 ALAVTYIIH 70
          ALAVTY+ H
Sbjct: 61 ALAVTYLFH 67
[Close]
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A068U472_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041895001 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.100e-13
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 1 

		  

Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTM-APSPAAL-PPSNDGATIDQGIAYLLLVVALAV 66
          +S R + LPIIGF+M+ALF+++ GQ++ APSPA + PPSNDGA IDQG+AY+LLVVALA+
Sbjct: 2  NSARSFALPIIGFIMLALFELSRGQSITAPSPAPIGPPSNDGAAIDQGVAYVLLVVALAI 61

Query: 67 TYIIH 70
          TY++H
Sbjct: 62 TYLVH 66
[Close]
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: A0A067KBQ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07227 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.800e-13
Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1 

		  

Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S +  Y LPIIGF+ +AL ++ HGQ +APSPAA  PS+DG TIDQGIAY+L++VALAVTY
Sbjct: 2  SPMNLYALPIIGFMFLALLQLGHGQAIAPSPAAEGPSSDGNTIDQGIAYVLMLVALAVTY 61

Query: 67 IIH 70
          + H
Sbjct: 62 LFH 64
[Close]
BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Match: B9RKS9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1053260 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.300e-13
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 1 

		  

Query: 6  SSSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVT 65
          S+ ++ Y LPIIG ++ ALF++ + QTMAPSPAA  PS+DG +IDQGIAY+LL+VALAVT
Sbjct: 2  STPMKLYALPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQGIAYVLLLVALAVT 61

Query: 66 YIIH 70
          Y+ H
Sbjct: 62 YLFH 65
[Close]
BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.100e-7
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1 

		  

Query: 16 IIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          +  F+   +  +   Q++AP+PA   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 12 LFSFVFAVILSLAGAQSLAPAPA---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62
[Close]
BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-6
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1 

		  

Query: 13 VLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          V+ +  F+   +      Q++AP+P+   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPAPS---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62
[Close]
BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 8.900e-6
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1 

		  

Query: 7  SSLRF--YVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAV 66
          +SL+F   +L +   + + L  +    + +P+PA   P++DG +IDQGIAY+L++VALA+
Sbjct: 2  ASLKFPLEILAVFVIISVILLPIAQSHSSSPAPA---PTSDGTSIDQGIAYVLMMVALAL 61

Query: 67 TYIIH 70
          TY IH
Sbjct: 62 TYFIH 63
[Close]
BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT5G24105.1 (arabinogalactan protein 41)

HSP 1 Score: 58.9 bits (141), Expect = 1.400e-9
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1 

		  

Query: 7  SSLRFYVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTY 66
          S L F V  I+  +   L  + H Q+ AP+PA   P++DG TIDQGIAY+L++VAL +TY
Sbjct: 4  SRLFFGVSTIVSIIFAILLPMAHAQSAAPAPA---PTSDGTTIDQGIAYVLMLVALVLTY 63

Query: 67 IIH 70
          +IH
Sbjct: 64 LIH 63
[Close]
BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT2G46330.1 (arabinogalactan protein 16)

HSP 1 Score: 54.3 bits (129), Expect = 3.500e-8
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 1 

		  

Query: 16 IIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          +  F+   +  +   Q++AP+PA   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 12 LFSFVFAVILSLAGAQSLAPAPA---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62
[Close]
BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT3G61640.1 (arabinogalactan protein 20)

HSP 1 Score: 53.1 bits (126), Expect = 7.700e-8
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1 

		  

Query: 13 VLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAVTYIIH 70
          V+ +  F+   +      Q++AP+P+   P++DG +IDQGIAYLL+VVAL +TY+IH
Sbjct: 9  VIALFAFVFAVISPFAGAQSLAPAPS---PTSDGTSIDQGIAYLLMVVALVLTYLIH 62
[Close]
BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Match: AT5G53250.1 (arabinogalactan protein 22)

HSP 1 Score: 50.4 bits (119), Expect = 5.000e-7
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1 

		  

Query: 7  SSLRF--YVLPIIGFLMMALFKVTHGQTMAPSPAALPPSNDGATIDQGIAYLLLVVALAV 66
          +SL+F   +L +   + + L  +    + +P+PA   P++DG +IDQGIAY+L++VALA+
Sbjct: 2  ASLKFPLEILAVFVIISVILLPIAQSHSSSPAPA---PTSDGTSIDQGIAYVLMMVALAL 61

Query: 67 TYIIH 70
          TY IH
Sbjct: 62 TYFIH 63
The following BLAST results are available for this feature:
BLAST of Spo16640.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|870850988|gb|KMT03054.1|2.9e-1771.0hypothetical protein BVRB_8g19... [more]
gi|870850984|gb|KMT03050.1|3.2e-1671.0hypothetical protein BVRB_8g19... [more]
gi|661893536|emb|CDP03345.1|1.5e-1364.6unnamed protein product [Coffe... [more]
gi|643724455|gb|KDP33656.1|2.6e-1363.4hypothetical protein JCGZ_0722... [more]
gi|223546779|gb|EEF48277.1|3.4e-1362.5conserved hypothetical protein... [more]
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BLAST of Spo16640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8BSV1_BETVU2.0e-1771.0Uncharacterized protein OS=Bet... [more]
A0A0J8BNW8_BETVU2.3e-1671.0Uncharacterized protein OS=Bet... [more]
A0A068U472_COFCA1.1e-1364.6Uncharacterized protein OS=Cof... [more]
A0A067KBQ4_JATCU1.8e-1363.4Uncharacterized protein OS=Jat... [more]
B9RKS9_RICCO2.3e-1362.5Putative uncharacterized prote... [more]
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BLAST of Spo16640.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AGP16_ARATH6.1e-748.1Arabinogalactan peptide 16 OS=... [more]
AGP20_ARATH1.4e-645.6Arabinogalactan peptide 20 OS=... [more]
AGP22_ARATH8.9e-641.5Arabinogalactan peptide 22 OS=... [more]
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BLAST of Spo16640.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G24105.11.4e-949.2arabinogalactan protein 41[more]
AT2G46330.13.5e-848.1arabinogalactan protein 16[more]
AT3G61640.17.7e-845.6arabinogalactan protein 20[more]
AT5G53250.15.0e-741.5arabinogalactan protein 22[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009424Arabinogalactan peptide, AGPPFAMPF06376DUF1070coord: 34..69
score: 1.3
NoneNo IPR availablePANTHERPTHR33374FAMILY NOT NAMEDcoord: 3..69
score: 3.6
NoneNo IPR availablePANTHERPTHR33374:SF7SUBFAMILY NOT NAMEDcoord: 3..69
score: 3.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006768 biotin metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0051716 cellular response to stimulus
biological_process GO:0006464 cellular protein modification process
biological_process GO:0010200 response to chitin
biological_process GO:0006952 defense response
biological_process GO:0044238 primary metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009987 cellular process
biological_process GO:0006508 proteolysis
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0030488 tRNA methylation
cellular_component GO:0000785 chromatin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0031515 tRNA (m1A) methyltransferase complex
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0016429 tRNA (adenine-N1-)-methyltransferase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression