Spo26994 (gene) | SpinachBase

Overview


Name	Spo26994
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mitochondrial import receptor subunit TOM9-2 (Mitochondrial import receptor subunit TOM22 homolog 2) (Translocase of outer membrane 22 kDa subunit homolog 2) (Translocase of outer membrane 9 kDa subunit TOM9-2)
Location	SpoScf_03596 : 19903 .. 20205 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAAACAGAAAGAGAATAGGATCAAGCAGCGACAATGGAGGCGGAGTACTAGCAAGAGTGACAAGCACAGTTTCAGATTCACCAATCTTCCAAAAAGGGGTACAATCTGCTAGCGATGTGGCCGGTGTCACCAAGAAGCTGCTCAAGAGCACCGGCAAAGCTGCTTGGATCGTCGGCACCACTTTCCTCGTCCTTGCTCTCCCGCTCATCATCGAGCTCGAGCGCGATGGTCAGTTGGATGCTATAGAGCTTCAGCAGGCTAGTCTTCTCGGCACCCCTCCCCCTGCCGGCCATTAA

mRNA sequence

ATGGCGTCAAACAGAAAGAGAATAGGATCAAGCAGCGACAATGGAGGCGGAGTACTAGCAAGAGTGACAAGCACAGTTTCAGATTCACCAATCTTCCAAAAAGGGGTACAATCTGCTAGCGATGTGGCCGGTGTCACCAAGAAGCTGCTCAAGAGCACCGGCAAAGCTGCTTGGATCGTCGGCACCACTTTCCTCGTCCTTGCTCTCCCGCTCATCATCGAGCTCGAGCGCGATGGTCAGTTGGATGCTATAGAGCTTCAGCAGGCTAGTCTTCTCGGCACCCCTCCCCCTGCCGGCCATTAA

Coding sequence (CDS)

ATGGCGTCAAACAGAAAGAGAATAGGATCAAGCAGCGACAATGGAGGCGGAGTACTAGCAAGAGTGACAAGCACAGTTTCAGATTCACCAATCTTCCAAAAAGGGGTACAATCTGCTAGCGATGTGGCCGGTGTCACCAAGAAGCTGCTCAAGAGCACCGGCAAAGCTGCTTGGATCGTCGGCACCACTTTCCTCGTCCTTGCTCTCCCGCTCATCATCGAGCTCGAGCGCGATGGTCAGTTGGATGCTATAGAGCTTCAGCAGGCTAGTCTTCTCGGCACCCCTCCCCCTGCCGGCCATTAA

Protein sequence

MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo26994.1	Spo26994.1	mRNA

Homology

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BLAST of Spo26994.1 vs. NCBI nr
Match: gi|902184558|gb|KNA10312.1| (hypothetical protein SOVF_145450 [Spinacia oleracea])

HSP 1 Score: 189.9 bits (481), Expect = 2.200e-45
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60
           MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV
Sbjct: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60

Query: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 101
           GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH
Sbjct: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 100

[Close]

BLAST of Spo26994.1 vs. NCBI nr
Match: gi|902183133|gb|KNA10063.1| (hypothetical protein SOVF_147920 [Spinacia oleracea])

HSP 1 Score: 184.1 bits (466), Expect = 1.200e-43
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 1

		  
Query: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60
           MAS RKRIGSSSDNGGGVLARVT+TVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV
Sbjct: 1   MASGRKRIGSSSDNGGGVLARVTNTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60

Query: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 101
           GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPA H
Sbjct: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAAH 100

[Close]

BLAST of Spo26994.1 vs. NCBI nr
Match: gi|731372562|ref|XP_010666386.1| (PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 165.2 bits (417), Expect = 5.700e-38
Identity = 89/98 (90.82%), Postives = 93/98 (94.90%), Query Frame = 1

		  
Query: 2   ASNRKRIGSSSDNG-GGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 61
           +S RKRIGSSSDNG GGV+ARVTSTVSDSPIFQKGVQSAS  A +TKKLLKSTGKAAWIV
Sbjct: 4   SSGRKRIGSSSDNGGGGVIARVTSTVSDSPIFQKGVQSASGAADITKKLLKSTGKAAWIV 63

Query: 62  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPA 99
           GTTFLVLALPLIIELERDGQLDA+ELQQASLLGTPPPA
Sbjct: 64  GTTFLVLALPLIIELERDGQLDALELQQASLLGTPPPA 101

[Close]

BLAST of Spo26994.1 vs. NCBI nr
Match: gi|460389672|ref|XP_004240474.1| (PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Solanum lycopersicum])

HSP 1 Score: 116.7 bits (291), Expect = 2.300e-23
Identity = 58/93 (62.37%), Postives = 75/93 (80.65%), Query Frame = 1

		  
Query: 7   RIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFLV 66
           R G+ +  G G+L+R +S++S+SPI  +G ++ASDVA V KKL KSTGKAAWI GTTFL+
Sbjct: 13  RPGAGAGAGDGILSRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLI 72

Query: 67  LALPLIIELERDGQLDAIELQQASLLGTPPPAG 100
           L +PLIIE++RD QL  +E+QQASLLG PPPAG
Sbjct: 73  LVVPLIIEMDRDAQLTELEMQQASLLGAPPPAG 105

[Close]

BLAST of Spo26994.1 vs. NCBI nr
Match: gi|698513962|ref|XP_009801898.1| (PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Nicotiana sylvestris])

HSP 1 Score: 115.2 bits (287), Expect = 6.800e-23
Identity = 56/84 (66.67%), Postives = 71/84 (84.52%), Query Frame = 1

		  
Query: 15  GGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFLVLALPLIIE 74
           G G+++RV+S++S SPI  +G ++ASD A + KKLLKSTGKAAWI GTTFL+L +PLIIE
Sbjct: 19  GDGIISRVSSSISQSPIVYQGKRAASDAALIAKKLLKSTGKAAWIAGTTFLILVVPLIIE 78

Query: 75  LERDGQLDAIELQQASLLGTPPPA 99
           ++RD QL  +ELQQASLLGTPPPA
Sbjct: 79  MDRDAQLTELELQQASLLGTPPPA 102

[Close]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSN9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_145450 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.500e-45
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1

		  
Query: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60
           MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV
Sbjct: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60

Query: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 101
           GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH
Sbjct: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 100

[Close]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTM4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147920 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.300e-44
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 1

		  
Query: 1   MASNRKRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60
           MAS RKRIGSSSDNGGGVLARVT+TVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV
Sbjct: 1   MASGRKRIGSSSDNGGGVLARVTNTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 60

Query: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAGH 101
           GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPA H
Sbjct: 61  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPAAH 100

[Close]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4L3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_001700 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.000e-38
Identity = 89/98 (90.82%), Postives = 93/98 (94.90%), Query Frame = 1

		  
Query: 2   ASNRKRIGSSSDNG-GGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIV 61
           +S RKRIGSSSDNG GGV+ARVTSTVSDSPIFQKGVQSAS  A +TKKLLKSTGKAAWIV
Sbjct: 4   SSGRKRIGSSSDNGGGGVIARVTSTVSDSPIFQKGVQSASGAADITKKLLKSTGKAAWIV 63

Query: 62  GTTFLVLALPLIIELERDGQLDAIELQQASLLGTPPPA 99
           GTTFLVLALPLIIELERDGQLDA+ELQQASLLGTPPPA
Sbjct: 64  GTTFLVLALPLIIELERDGQLDALELQQASLLGTPPPA 101

[Close]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Match: K4C3J2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.600e-23
Identity = 58/93 (62.37%), Postives = 75/93 (80.65%), Query Frame = 1

		  
Query: 7   RIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFLV 66
           R G+ +  G G+L+R +S++S+SPI  +G ++ASDVA V KKL KSTGKAAWI GTTFL+
Sbjct: 13  RPGAGAGAGDGILSRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLI 72

Query: 67  LALPLIIELERDGQLDAIELQQASLLGTPPPAG 100
           L +PLIIE++RD QL  +E+QQASLLG PPPAG
Sbjct: 73  LVVPLIIEMDRDAQLTELEMQQASLLGAPPPAG 105

[Close]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Match: A0A0V0GW57_SOLCH (Putative mitochondrial import receptor subunit TOM9-2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 8.100e-23
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 1

		  
Query: 15  GGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFLVLALPLIIE 74
           G G+++R +S++S+SPI  +G ++ASDVA V KKL KSTGKAAWI GTTFL+L +PLIIE
Sbjct: 17  GDGIISRFSSSISESPIVYQGKRAASDVAFVAKKLFKSTGKAAWIAGTTFLILVVPLIIE 76

Query: 75  LERDGQLDAIELQQASLLGTPPPAG 100
           ++RD QL  +E+QQASLLG PPPAG
Sbjct: 77  MDRDAQLTELEMQQASLLGAPPPAG 101

[Close]

BLAST of Spo26994.1 vs. ExPASy Swiss-Prot
Match: TOM92_ARATH (Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis thaliana GN=TOM9-2 PE=1 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 5.400e-20
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 1

		  
Query: 6  KRIGSSSDNGG--GVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTT 65
          KRIG+    GG   +LAR+    S+S I  +G ++A D   V+KKLL+STGKAAWI GTT
Sbjct: 4  KRIGAGKSGGGDPNILARI----SNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTT 63

Query: 66 FLVLALPLIIELERDGQLDAIELQQASLLGTPP 97
          FL+L +PLIIE++R+ Q++ IELQQASLLG PP
Sbjct: 64 FLILVVPLIIEMDREAQINEIELQQASLLGAPP 92

[Close]

BLAST of Spo26994.1 vs. ExPASy Swiss-Prot
Match: TOM91_ARATH (Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis thaliana GN=TOM9-1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.600e-17
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 1

		  
Query: 6  KRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFL 65
          K+IG+   +   +LA++    S+  I  +G ++A D   V+KKLLKSTGKAAWI GTTFL
Sbjct: 4  KKIGAGKGDSS-ILAKI----SNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFL 63

Query: 66 VLALPLIIELERDGQLDAIELQQASLLGTPP 97
          +LA+PLI+ELE+D +L  I+ +QASLLGTPP
Sbjct: 64 ILAVPLILELEQDHRLGEIDFEQASLLGTPP 89

[Close]

BLAST of Spo26994.1 vs. TAIR (Arabidopsis)
Match: AT5G43970.1 (translocase of outer membrane 22-V)

HSP 1 Score: 98.2 bits (243), Expect = 3.000e-21
Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 1

		  
Query: 6  KRIGSSSDNGG--GVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTT 65
          KRIG+    GG   +LAR+    S+S I  +G ++A D   V+KKLL+STGKAAWI GTT
Sbjct: 4  KRIGAGKSGGGDPNILARI----SNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTT 63

Query: 66 FLVLALPLIIELERDGQLDAIELQQASLLGTPP 97
          FL+L +PLIIE++R+ Q++ IELQQASLLG PP
Sbjct: 64 FLILVVPLIIEMDREAQINEIELQQASLLGAPP 92

[Close]

BLAST of Spo26994.1 vs. TAIR (Arabidopsis)
Match: AT1G04070.1 (translocase of outer membrane 22-I)

HSP 1 Score: 88.2 bits (217), Expect = 3.100e-18
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 1

		  
Query: 6  KRIGSSSDNGGGVLARVTSTVSDSPIFQKGVQSASDVAGVTKKLLKSTGKAAWIVGTTFL 65
          K+IG+   +   +LA++    S+  I  +G ++A D   V+KKLLKSTGKAAWI GTTFL
Sbjct: 4  KKIGAGKGDSS-ILAKI----SNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFL 63

Query: 66 VLALPLIIELERDGQLDAIELQQASLLGTPP 97
          +LA+PLI+ELE+D +L  I+ +QASLLGTPP
Sbjct: 64 ILAVPLILELEQDHRLGEIDFEQASLLGTPP 89

The following BLAST results are available for this feature:

BLAST of Spo26994.1 vs. NCBI nr
BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
BLAST of Spo26994.1 vs. ExPASy Swiss-Prot
BLAST of Spo26994.1 vs. TAIR (Arabidopsis)

BLAST of Spo26994.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902184558\|gb\|KNA10312.1\|	2.2e-45	100.	hypothetical protein SOVF_1454...	[more]
gi\|902183133\|gb\|KNA10063.1\|	1.2e-43	97.0	hypothetical protein SOVF_1479...	[more]
gi\|731372562\|ref\|XP_010666386.1\|	5.7e-38	90.8	PREDICTED: mitochondrial impor...	[more]
gi\|460389672\|ref\|XP_004240474.1\|	2.3e-23	62.3	PREDICTED: mitochondrial impor...	[more]
gi\|698513962\|ref\|XP_009801898.1\|	6.8e-23	66.6	PREDICTED: mitochondrial impor...	[more]

BLAST of Spo26994.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QSN9_SPIOL	1.5e-45	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QTM4_SPIOL	8.3e-44	97.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8B4L3_BETVU	4.0e-38	90.8	Uncharacterized protein OS=Bet...	[more]
K4C3J2_SOLLC	1.6e-23	62.3	Uncharacterized protein OS=Sol...	[more]
A0A0V0GW57_SOLCH	8.1e-23	64.7	Putative mitochondrial import ...	[more]

BLAST of Spo26994.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
TOM92_ARATH	5.4e-20	56.9	Mitochondrial import receptor ...	[more]
TOM91_ARATH	5.6e-17	53.8	Mitochondrial import receptor ...	[more]

BLAST of Spo26994.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G43970.1	3.0e-21	56.9	translocase of outer membrane ...	[more]
AT1G04070.1	3.1e-18	53.8	translocase of outer membrane ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005683	Mitochondrial import receptor subunit Tom22	PFAM	PF04281	Tom22	coord: 37..88 score: 5.
IPR017411	Mitochondrial outer membrane translocase complex, subunit Tom22, plant	PIR	PIRSF038151	TOM9-2_plant	coord: 1..100 score: 2.7
None	No IPR available	PANTHER	PTHR12504	MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22	coord: 37..98 score: 4.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0006421	asparaginyl-tRNA aminoacylation
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0009269	response to desiccation
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006452	translational frameshifting
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0009811	stilbene biosynthetic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009643	photosynthetic acclimation
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010218	response to far red light
biological_process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone
biological_process	GO:0032259	methylation
biological_process	GO:0010114	response to red light
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009637	response to blue light
biological_process	GO:0009228	thiamine biosynthetic process
biological_process	GO:0009809	lignin biosynthetic process
biological_process	GO:0052837	thiazole biosynthetic process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0051604	protein maturation
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0008283	cell proliferation
biological_process	GO:0051641	cellular localization
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006260	DNA replication
biological_process	GO:0051179	localization
biological_process	GO:0006414	translational elongation
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0048451	petal formation
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0048453	sepal formation
biological_process	GO:0007129	synapsis
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0016556	mRNA modification
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0051301	cell division
biological_process	GO:0048825	cotyledon development
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006412	translation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0019408	dolichol biosynthetic process
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006396	RNA processing
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006011	UDP-glucose metabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0009853	photorespiration
biological_process	GO:0015031	protein transport
biological_process	GO:0009780	photosynthetic NADP+ reduction
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0006534	cysteine metabolic process
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0042550	photosystem I stabilization
biological_process	GO:0050821	protein stabilization
biological_process	GO:0034765	regulation of ion transmembrane transport
biological_process	GO:0006508	proteolysis
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
cellular_component	GO:0009536	plastid
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0016020	membrane
cellular_component	GO:0031972	chloroplast intermembrane space
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0009573	chloroplast ribulose bisphosphate carboxylase complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0030093	chloroplast photosystem I
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005618	cell wall
cellular_component	GO:0000776	kinetochore
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0045281	succinate dehydrogenase complex
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0010319	stromule
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005778	peroxisomal membrane
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0031359	integral component of chloroplast outer membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0046930	pore complex
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0022843	voltage-gated cation channel activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0031071	cysteine desulfurase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004816	asparagine-tRNA ligase activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0047763	caffeate O-methyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05949	0.91	Barchart \| Table
Spo18201	0.83	Barchart \| Table
Spo05935	0.83	Barchart \| Table
Spo00968	0.82	Barchart \| Table
Spo15902	0.80	Barchart \| Table
Spo16694	0.79	Barchart \| Table
Spo25206	0.78	Barchart \| Table
Spo18574	0.77	Barchart \| Table
Spo01513	0.77	Barchart \| Table
Spo24874	0.77	Barchart \| Table
Spo18874	0.76	Barchart \| Table
Spo01398	0.76	Barchart \| Table
Spo14404	0.76	Barchart \| Table
Spo09139	0.75	Barchart \| Table
Spo24213	0.74	Barchart \| Table
Spo20284	0.74	Barchart \| Table
Spo11679	0.74	Barchart \| Table
Spo03626	0.74	Barchart \| Table
Spo05415	0.74	Barchart \| Table
Spo01546	0.73	Barchart \| Table
Spo02287	0.73	Barchart \| Table
Spo02159	0.73	Barchart \| Table
Spo04683	0.73	Barchart \| Table
Spo18143	0.72	Barchart \| Table
Spo01715	0.72	Barchart \| Table
Spo02389	0.72	Barchart \| Table
Spo02928	0.72	Barchart \| Table
Spo24704	0.72	Barchart \| Table
Spo27285	0.72	Barchart \| Table
Spo08172	0.72	Barchart \| Table
Spo10401	0.72	Barchart \| Table
Spo18444	0.72	Barchart \| Table
Spo17903	0.72	Barchart \| Table
Spo15092	0.71	Barchart \| Table
Spo01535	0.71	Barchart \| Table
Spo17068	0.70	Barchart \| Table
Spo01491	0.70	Barchart \| Table
Spo05150	0.70	Barchart \| Table
Spo08157	0.70	Barchart \| Table
Spo10863	0.70	Barchart \| Table
Spo17662	0.70	Barchart \| Table
Spo21414	0.70	Barchart \| Table
Spo24203	0.70	Barchart \| Table
Spo25304	0.70	Barchart \| Table
Spo08308	0.69	Barchart \| Table
Spo16820	0.69	Barchart \| Table
Spo25340	0.69	Barchart \| Table
Spo24783	0.69	Barchart \| Table
Spo08861	0.69	Barchart \| Table
Spo17761	0.69	Barchart \| Table
Spo01066	0.69	Barchart \| Table
Spo00580	0.69	Barchart \| Table
Spo12759	0.68	Barchart \| Table
Spo04527	0.68	Barchart \| Table
Spo01403	0.68	Barchart \| Table
Spo03847	0.67	Barchart \| Table
Spo17244	0.66	Barchart \| Table
Spo12438	0.66	Barchart \| Table
Spo11682	0.66	Barchart \| Table
Spo11336	0.66	Barchart \| Table
Spo19349	0.66	Barchart \| Table
Spo19658	0.66	Barchart \| Table
Spo07017	0.66	Barchart \| Table
Spo24416	0.66	Barchart \| Table
Spo24863	0.66	Barchart \| Table
Spo24867	0.66	Barchart \| Table
Spo13427	0.66	Barchart \| Table
Spo10012	0.65	Barchart \| Table
Spo22452	0.65	Barchart \| Table
Spo16692	0.65	Barchart \| Table