Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGAACACATGGGTATGGTTGGGAGTATTCGGGAGCTTATTATTGTTCATAGGAGGATTAATGAATGTGGTGAAGGTGTTTAAGATGCAACAAATGAACGGACTACGTTTAGAGAAACTACGAGGAGGTGCTCAAGAAGGGTTGGTTCGAGTAAGAGAAGGTCGTGTTCCTCTAATAACCGACGAAAGTCTTTCCACTCGTAGATTTCAAGGGGCCGAGCCAAAGAAACCTATCGCGGCTACCCCTTACAAAGATGTTCTTGTTAGTAACACTTGAAGAGTTGAAGGATTTATATAGGGGAGCTAGCAATGTACGTATATGACACTTTCCCTATTGATGAATTATTGATGATTCGAAATTGTATCAAATTAAGCCTATTTCGATTCACAAGTTTGTTATGATCATGTGGGTTGGTTCTTGTCCCATATATAGATCGAACTTGAAAATTCTTGATACTAGTGTGTGTCAATTTGTACTTTCTCTCCACAATTAATTCTACCTGACCTTCTATGGCAATTTTTATTATTATGCACGTACAATCAAGACTATTTTTATGCTTATCGAATGAGCTCTAGTAGATTTGGTTATCTATAGTCGGTCCGCTGGCCGGATCCGGAAAAGTACGGGTTTGGATAGCATAAAATATGCATTTTTAGACCAAAATTCGAGTTTTGCCTGAAAAAAAAGGTTGAAATTTATATCTTAATATTGGGAGGATGTTGAAATAACAAATTTGCAAGAGCATTAATTTGCAAGGGCATTACTTAATTGACCGCTTCACCGTCTTAATTTGGTAATACTCATGAAAATGGATATGGACATAAAAATCTAATTGGTGTTAAAGGATACATATATGAAAGTTTGTATGAAGCCTATGTGTATAACATCTTTAACATTTCATTTATGGTTGTTTGGTTCAAAATTTAGTTATTAGTTATTACAATCCAANATAAGGTCACACATATAAGCACTAATTGGAATGGGCCCAAAAGGCCCGATGGCAATCGGTCTATTAAGGGAAAGAATGTTGGGCTTTGGTTTTGTGTTAACCTAAAACTCTCACATTATAATAGATATAATGTCAGGGATTTAGAAATTACGTAATTGAATATCTGACAAAAGGAAAAAAAAAAGCCCTAATTCTTATTCTCTGAAACGTCGTTCTTCCCAAACAAAGCAAGAGATTGATCGTGATGGTTCTCTTCCGTACTAGCATACGTGGGATTCAATTGGTGCTTGTGGACTAAGTAGAGGAGCAACAAGTGGGGCTCTAAGATCTTCGGAGCTTGCATACGAACGGGAGAACACGCTACAAAGGTGATTATTCTTTCGACTTAATCTGATCTATACTATTGTTATGCATGAGATCCTGTGATAGATGTTAGGAAATTATTTCCTGAAATTCCGCTTTATGCATCTATATGTTCCTACAGAAATTTATATCTTAATATTGGGAGGATGTTGAAATAACAAATTTGCAAGAGCATTAATTTGCAAGGGCATTACTTAATTGACCGCTTCACCGGCTTAATTTGGTAATACTCATGAAAATGGATATGGACATAAAAATCTAAGAGGAAGTATTTTCGGATATCAGATATTTGTGGACAAATGCATATCATAACAAAAGACAAAATAAGAAAAATGACAAAAAAGAAATTAAATGGTACTTTTTTAAACAAAAATGGTACTTTTTTTAACTGAATGGTACTTTTTTTTTACAGAATGGTACTTTTTTAACATAAATGGTACTTCCTTTTTTGTCTTTTAGCTATTTGTCTTTTAGCTGATATGTGTGTTGCCACACATATCTGATATCCGAAAAAACAACCTCAAAATCTAATTGGTGTTAAAGGATACATATATGAAAGTTTGTATGAAGCCTATGTGTATAACATCTTTAACATTTCATTTATGGTTGTTTGGTTCAAAATTTAGTTATTAGTTATTACAATCCAATAATGGACAAGTATGTTATGCTAAATAAAAATCAATTGTTTTGATATTTTTATGATGCAAAAATGTGAGAGTTTGTCATGTTAAGGGAAAAACATTTAACATTTATGACTGTATATGAACGGAGGAGGATTGTTGACAATACATATAAGGTGCAACCGGGTGCACGATGTACCCTTTTAAATTTTTCCTTTACGCGCAAGGAGAAAATGTGACAGAGATCGAACACAAAATATATCGGTAACTTTTGTGTAACACCGCGTTACCAGAATTACCACTTTGATTGCTTAACTAATTGGTTTCATTGCTTAACTAATTAGTTCTAGCGCTTACTAATTAGTTTCTTTGTTTAACTAATTGGTTTCAATGCAAACTAATTAGTTCCATTCACTACAAGAAATTGTATCATTAACGAGAGGAAATCTCGTCGCTAAAGGCCAGTAATCGTTGATTAATGACGGGATTTCCTGTGGCGAACCCGTCATAAAAGGGGGCCGTCGTTAATGAAAAATCCCGTCGTTAACCCGTCATAAAAGACATTTGTGACAATTATTTCCGTCTTTGTTTGGTTGTTAGCCCCGTAGTAAAAGGCTTTTGCGACGGAATTTTTGACCCGTCGTTAATAGGTTGTCATTAAAGATACAAATTCTTGTAGTGATTGCTTAACTAATTGATTTCATTGATTAACTTAAATGACACAAGGTGGTCTTTTGTGTAAGACTGCCTTATATAAAAGTTTGTGATGTACGTGGACGCATCTAATAATTTTCAGATGATTAAATTATGTTATTAGAGTGTGATAATTAATGATCGAGCAGCATAAGTTTAAAACAGGTTATATAAACAAAAGAAACCGAGTATGAAAAATTAAATTAAGGTTGGAAGCATTGCATTTGTTTGCATCTACGCTTAATATTTCATAAATGAATTTCTTCATTTAATCTTCCTTAGTGCATGTCATAAAACGTGAAGTTTCACTTTTGTTCTATGGTTTTTTGACTTAAAATTCAATGCATAAGACAAAGTTTTATTATCTTATGTTGAGAAACGTAATTGTATTTACGTTGTATTTATTGAAATTGATGAAAGAAACGCCTCTAAGGAAAAACATCGCTTGAAGTGTGCTGCCTTTTCCAATAAATAGAGATGGTAACTCACTTGTAAATATAAGAAAAACAAATTATACTCTTCTTGTTTTCTCACTAATTAGGGCTTGTTTGGATTAGGCAAATTAATTAAGGGGGGTAAACATAAGGGAGTAGATAATACATGGGAAATTTTTATGGGGTTAATTGTTTCCTTTCAATGACAACATTGCCGCTCCCCAGGCGTGGGAATCGACCACGTCCAATTTTTCGATAAATTGGATGTAGGATGTCCAACAATGCTGTCCAGATCCATCTGGAATGATTAAGCAGCTCACGATAATGAGGAGGATGGCCTTGATCCTCTGA GGGAACACATGGGTATGGTTGGGAGTATTCGGGAGCTTATTATTGTTCATAGGAGGATTAATGAATGTGGTGAAGGTGTTTAAGATGCAACAAATGAACGGACTACGTTTAGAGAAACTACGAGGAGGTGCTCAAGAAGGGTTGGTTCGAGTAAGAGAAGGTCGTGTTCCTCTAATAACCGACGAAAGTCTTTCCACTCGTAGATTTCAAGGGGCCGAGCCAAAGAAACCTATCGCGGCTACCCCTTACAAAGATGTTCTTGATGTCCAACAATGCTGTCCAGATCCATCTGGAATGATTAAGCAGCTCACGATAATGAGGAGGATGGCCTTGATCCTCTGA GGGAACACATGGGTATGGTTGGGAGTATTCGGGAGCTTATTATTGTTCATAGGAGGATTAATGAATGTGGTGAAGGTGTTTAAGATGCAACAAATGAACGGACTACGTTTAGAGAAACTACGAGGAGGTGCTCAAGAAGGGTTGGTTCGAGTAAGAGAAGGTCGTGTTCCTCTAATAACCGACGAAAGTCTTTCCACTCGTAGATTTCAAGGGGCCGAGCCAAAGAAACCTATCGCGGCTACCCCTTACAAAGATGTTCTTGATGTCCAACAATGCTGTCCAGATCCATCTGGAATGATTAAGCAGCTCACGATAATGAGGAGGATGGCCTTGATCCTCTGA GNTWVWLGVFGSLLLFIGGLMNVVKVFKMQQMNGLRLEKLRGGAQEGLVRVREGRVPLITDESLSTRRFQGAEPKKPIAATPYKDVLDVQQCCPDPSGMIKQLTIMRRMALIL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20012.1 vs. NCBI nr
Match: gi|870865009|gb|KMT16076.1| (hypothetical protein BVRB_3g052440 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 136.0 bits (341), Expect = 4.200e-29 Identity = 70/88 (79.55%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of Spo20012.1 vs. NCBI nr
Match: gi|731321732|ref|XP_010671510.1| (PREDICTED: uncharacterized protein LOC104888288 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 136.0 bits (341), Expect = 4.200e-29 Identity = 70/88 (79.55%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of Spo20012.1 vs. NCBI nr
Match: gi|147804914|emb|CAN66869.1| (hypothetical protein VITISV_013673 [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 1.900e-21 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of Spo20012.1 vs. NCBI nr
Match: gi|225462749|ref|XP_002268340.1| (PREDICTED: uncharacterized protein LOC100244979 [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 1.900e-21 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of Spo20012.1 vs. NCBI nr
Match: gi|302143673|emb|CBI22534.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 1.900e-21 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJL8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g052440 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.900e-29 Identity = 70/88 (79.55%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Match: A5ALP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013673 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.300e-21 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Match: F6H6F5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02650 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.300e-21 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MKQ4_GOSAR (tRNA dimethylallyltransferase OS=Gossypium arboreum GN=F383_22595 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.900e-21 Identity = 58/89 (65.17%), Postives = 68/89 (76.40%), Query Frame = 1
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UFU1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g161700 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.800e-21 Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 1
BLAST of Spo20012.1 vs. TAIR (Arabidopsis)
Match: AT5G24130.1 (unknown protein) HSP 1 Score: 85.1 bits (209), Expect = 3.000e-17 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20012.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20012.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20012.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo20012.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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