Spo19305 (gene) | SpinachBase

Overview


Name	Spo19305
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Acyl carrier protein
Location	SpoScf_04762 : 4779 .. 8641 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTATGAAGCGGGGCGAGTGGGGATGGGGCGGGGCGGGCGGGGATGGGGCGGGTTCAACACAAAATCCACACCCGCCCCATCACCCATGGCGGGTACAATTTCTATACCCATCCCCGCCCCATCACCCGCCAAACCTACCTCCATCCCCGCCTACTTGGGGCGGATGCGGGGCGGGTCTCCCACGAAACCCGCCCCACTGACATCCCCACATTTACCCTTTAGCCCCAAACTTCTAATTCTCTTTTATATGTAGTTGTAGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCCGCGAATACGAGACTTCTTCAATCGAGACCAAGGTAAGCTCATTTTTGAGTCGGCCTCGCTTTTCGGAGCTGCTCCCATTAGCCTCAGTTTATGTAATGCTAATGTATCTCGTGCTTCTTTAAGTAAAAAAGGGTACTTAGCTTGGTGATAAGCCCACAATTAGTTAACAATTTGAAGTTGATTTTGATGGCCATAATAAGCCCAGAATTAGTTAGCTTTATCAAGTTGATTTCGATGGCTCGTTTGATATCACGGCCAGTTTGTGTTTTTTTTTATATTTTGAAATGCATATAAGATTTGATTGAATTATGAACTGAAAAATAGTCATATCTATAGTAATTATGTTGATTTTGAAAACTGACAACAAAAATTGGAAACTACTTTTAGTGGTTTTTATATTTTGATTTTTAGTTTAACAAAAATAGAAATCTAGAAACAAAAACGATATCGAACGAGCCTTACGTTTTTTGTTTCCAATTACTTTAAGCACCTTATGTTTAGTTAACATGAAAAACCATAGGAATTATGACTTCCTAGGAAGTGTAAGATTAGAGGCATTGTTAGGTTGATACAAACATGAGAAGTCACACTTCCTAAGACGTTGCTTACCAATAGATTTCTCTAGGTAAGTGAAACTTATCATGTGAATTACTTTCTATGTTTAACCAAACAATAATATTCACTTCATAGGAAATGCGTATACATGTAGAAAGTTCTACGATTAACCAAACAACCCCTTAAATTAGCTTATCTAGCTAGCTCTAATGAAAAAGTACTTGAATTAATTTAATCTTTTAACGTCTTATCAAAACTTTCATACTTGGTATAAAAATTTGACAACTTTACAATCTTGTGCTTACCATTATCAAACAAATAAATCGTATTCTTGTCATAATCATCTACGTAGTACTATTATGATATAGGTGCATTTTTCTAGTGTTTGTTTAAGTGATAGGGTGTATCGTAAATACACCTAGGTATAACGTGAGTAGGAACAATGACTAGTAATGAACGAATAAACTTATCTCAACTAAGTCGTGACGTGTATGAACACTACCCTAAAGTTGAATTTGCCCCGTTACGTACACACGACCTCTTGACAATCAACCTCCAGAGTTACACGACATCTATCTCGTTGGTGTAGTACAAAAAGATAGATTGAAAACGAGATTGAACGTTGCCCAAAAACAAACCAGAAAATTTTTGTTTAAGAGGAAAATTCCGAGAGCAATTACTTTTCTGTGTCTTTTTGTGAAGAAGAAAGCCACAACAAATAAGCTGAAAGAATTATTTCGGAAGGAAATAAATTCAGTAATCAATTAGAATCAAAATATGACAAACTAGTCGTTATGCGAGACTGAGCGGCAGCAAAAAGGGCCCCACCTACACCCGTGCCACTCGCCCAGCCCGGCCCGCGCGTGTGCGGTGGCCTAGAGCCTCCTCCCAAGTCTTCTAACAAAGTGGATAAAACTCTTATTTTTTTTATCAATATGGGACAAGCACAATTTATTTTGAAGCAAAACTAAGTTATGGATGGATATTTCCAACAACGTGTACGTAGTAGTATGTACCTTGTTTTAAGGTATACCAAATTCAAAAAAAAGTAACAATTGTAATATAATGCATCCTTTTGATGAATATGCAGGGGAATGGAAGATGTTCAAGTATAGTGTCTTTAGATTGGGGCAAAAGCAGTTTCCCAACACTCGGGACTTCTCGTCGTCGATCCTTTATCTCTGCTGTATGTTCTCTGTTAATTGATGTTCCTCATCCTGTTTAATGTTCATTTACATAATTCATGTGAATACTTTTATTAACCATGAATTGAATACGGTTTGGCAGGCAAAGAAGGAAACAATTGACAAAGTGTGCGACATTGTAAAGGAGAAACTGGCTTTAGGAGCTGATGTTGTGGTCACAGCTGATTCCGAGTTTAGTAAACTCGGTGCTGATTCATTGGACACGGTACATTCCTTCTCCCTACCTTCTTTAAGTCACTCCAGCTCGGAATTTGACAGATGATTCTTCCAAGGAATAATTTTACTTTTTCTAAGGAAATTATCATTTTCTCAAAGAATTATTTGTCGATATTTGGCCTAAGATCTTTGTAAGTCGGGTTTAGCATAGGTAATTCATAAAGGGGTGACCCATGGGTTGGTGTAACCGATAGCTTTGTAGGTAACTGATAACCAATAATACTCAAATGGTATCCAAGACCGAACCTACAATTTCGGGCACCTAAACTTTCAGATCGGAAATTTGGTATCCGATATAAATCATCCAATTGGAAAATTAGGCTTTATAACTAGATTCTTGTAATTCCATACTCTAAATACCAAAATTAGCACATGGATAACTCTTAAGAAAAAACATCCGCACATGATTTTAATGACATTACTAATTAAATTACAACTCCTTCAATTATAAATCGATAATTAACTTTTTGGAAAAACAATATATTTATGTTTGGAAAAACTTTAAAAAAATATTTATCGGATCGTTATCGAATACCCATTATTTTTATTTTGATAATCAAATTAATTCATTGATAAAAAAACTTATATGACATTTACATAAAGTTTTAAATACATCAAATACATAACAATCAAATCAAATAAAAATTTCCTTTCACCATAGCTACGATCGTAGTATATCAAATATTCTGTATACCCTCTTGTATATCGTTGTGATTTACAACCATAACAAATATGATTTCCGTCTGATTCGTTTGATCGAGTATCCATTATATATAAACTTAACCGTACCTGATAACCGAACTAATATATCGATTTGGATACACACTTTTTCGAACCAGATACCAAATCGGGTTTTGAATTTTCGGATAGTTTTGTTCAGCTATAATGTCACACATGAACTTGTGAACAAGCTCGTTACATAATTAAAAAGAAAGAGTTGCAACGTTTTATGACTAAAATATACTTCGTATAAACACTTGATGAAAACAAGGATTTGTTATTTGAATTGTGGTGATTATAAAGGTCGCAAGTTGCGACAACATTTAGTTGTCACAGTTTTACGTGTTGGAATCTAATTGCTACATATAGGCGCCACGTAGGTTTGCGTCATCACAATATTTTTACTATCAACGCAATATTTTTACTATGAAAATATGTAAATAAGGTAATCGATATAAAAAGGAAACAAATTATAATATTAAAATTTTCCTACCTTTTTTTAGAAATATATATAATAGGTTACGTAAGTTAAATATTTTAGTTTCCAATTTAAATCACGACTCATAAGCATGATATGTCATCATCGTGACACGGCTTAAAGGTCGCATCATTTTCGTTTGAATTGATTGTGCATTTTCTTGGCTAAGGATCGTAACTTGAGCACGAGTTTCTGAAGCTTGGCTCAAGCCCATATTAAGTTTTTACTTGATATTTATGGGCAATGACAGGTTGAGATAGTGATGAACCTCGAGGAAGAGTTCGGTATCAATGTGGATGAAGATAAAGCTCAAGATATATCAACCATCCAACAAGCCGCCGACGTTATTGAGAGTCTTCTTGAGAAGAAATAG

mRNA sequence

ATGGCGGGTATGAAGCGGGGCGAGTGGGGATGGGGCGGGGCGGGCGGGGATGGGGCGGGTTCAACACAAAATCCACACCCGCCCCATCACCCATGGCGGGGGAATGGAAGATGTTCAAGTATAGTGTCTTTAGATTGGGGCAAAAGCAGTTTCCCAACACTCGGGACTTCTCGTCGTCGATCCTTTATCTCTGCTGCAAAGAAGGAAACAATTGACAAAGTGTGCGACATTGTAAAGGAGAAACTGGCTTTAGGAGCTGATGTTGTGGTCACAGCTGATTCCGAGTTTAGTAAACTCGGTGCTGATTCATTGGACACGGTTGAGATAGTGATGAACCTCGAGGAAGAGTTCGGTATCAATGTGGATGAAGATAAAGCTCAAGATATATCAACCATCCAACAAGCCGCCGACGTTATTGAGAGTCTTCTTGAGAAGAAATAG

Coding sequence (CDS)

ATGGCGGGTATGAAGCGGGGCGAGTGGGGATGGGGCGGGGCGGGCGGGGATGGGGCGGGTTCAACACAAAATCCACACCCGCCCCATCACCCATGGCGGGGGAATGGAAGATGTTCAAGTATAGTGTCTTTAGATTGGGGCAAAAGCAGTTTCCCAACACTCGGGACTTCTCGTCGTCGATCCTTTATCTCTGCTGCAAAGAAGGAAACAATTGACAAAGTGTGCGACATTGTAAAGGAGAAACTGGCTTTAGGAGCTGATGTTGTGGTCACAGCTGATTCCGAGTTTAGTAAACTCGGTGCTGATTCATTGGACACGGTTGAGATAGTGATGAACCTCGAGGAAGAGTTCGGTATCAATGTGGATGAAGATAAAGCTCAAGATATATCAACCATCCAACAAGCCGCCGACGTTATTGAGAGTCTTCTTGAGAAGAAATAG

Protein sequence

MAGMKRGEWGWGGAGGDGAGSTQNPHPPHHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19305.1	Spo19305.1	mRNA

Homology

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BLAST of Spo19305.1 vs. NCBI nr
Match: gi|902230236|gb|KNA21773.1| (hypothetical protein SOVF_039930 [Spinacia oleracea])

HSP 1 Score: 211.5 bits (537), Expect = 1.000e-51
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1

		  
Query: 33  RGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA 92
           RGNGRCSSIV LDWGKSSFPTL TSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA
Sbjct: 8   RGNGRCSSIVCLDWGKSSFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA 67

Query: 93  DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK
Sbjct: 68  DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 121

[Close]

BLAST of Spo19305.1 vs. NCBI nr
Match: gi|113166|sp|P07854.2|ACP1_SPIOL (RecName: Full=Acyl carrier protein 1, chloroplastic; Short=ACP I; Short=Acyl carrier protein I; Flags: Precursor)

HSP 1 Score: 209.9 bits (533), Expect = 3.000e-51
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1

		  
Query: 29  HHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 88
           H   +GNGRCSSIV LDWGKSSFPTL TSRRRSFISAAKKETIDKVCDIVKEKLALGADV
Sbjct: 20  HKLSQGNGRCSSIVCLDWGKSSFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 79

Query: 89  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK
Sbjct: 80  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 137

[Close]

BLAST of Spo19305.1 vs. NCBI nr
Match: gi|170096|gb|AAA34023.1| (acyl carrier protein I precursor [Spinacia oleracea])

HSP 1 Score: 209.9 bits (533), Expect = 3.000e-51
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1

		  
Query: 29  HHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 88
           H   +GNGRCSSIV LDWGKSSFPTL TSRRRSFISAAKKETIDKVCDIVKEKLALGADV
Sbjct: 20  HKLSQGNGRCSSIVCLDWGKSSFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 79

Query: 89  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK
Sbjct: 80  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 137

[Close]

BLAST of Spo19305.1 vs. NCBI nr
Match: gi|731334673|ref|XP_010678339.1| (PREDICTED: acyl carrier protein 1, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 181.4 bits (459), Expect = 1.100e-42
Identity = 99/118 (83.90%), Postives = 105/118 (88.98%), Query Frame = 1

		  
Query: 29  HHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 88
           H   +G+GR SSIVSLDWGK S PTL TSRR   I AAKKET+DKVC+IV+EKLALGAD+
Sbjct: 19  HKISQGSGRLSSIVSLDWGKRSLPTLRTSRRL-LICAAKKETVDKVCEIVREKLALGADI 78

Query: 89  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
            VTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIE LLEKK
Sbjct: 79  QVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEMLLEKK 135

[Close]

BLAST of Spo19305.1 vs. NCBI nr
Match: gi|99031841|pdb|2AVA|A (Chain A, Solution Structure Of Stearoyl-Acyl Carrier Protein)

HSP 1 Score: 144.8 bits (364), Expect = 1.200e-31
Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 1

		  
Query: 66  AKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDK 125
           AKKETIDKV DIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDK
Sbjct: 1   AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDK 60

Query: 126 AQDISTIQQAADVIESLLEKK 147
           AQDISTIQQAADVIE LLEKK
Sbjct: 61  AQDISTIQQAADVIEGLLEKK 81

[Close]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQL5_SPIOL (Acyl carrier protein OS=Spinacia oleracea GN=SOVF_039930 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.100e-52
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1

		  
Query: 33  RGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA 92
           RGNGRCSSIV LDWGKSSFPTL TSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA
Sbjct: 8   RGNGRCSSIVCLDWGKSSFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA 67

Query: 93  DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK
Sbjct: 68  DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 121

[Close]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFK5_BETVU (Acyl carrier protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g113270 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.800e-43
Identity = 99/118 (83.90%), Postives = 105/118 (88.98%), Query Frame = 1

		  
Query: 29  HHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 88
           H   +G+GR SSIVSLDWGK S PTL TSRR   I AAKKET+DKVC+IV+EKLALGAD+
Sbjct: 19  HKISQGSGRLSSIVSLDWGKRSLPTLRTSRRL-LICAAKKETVDKVCEIVREKLALGADI 78

Query: 89  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
            VTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIE LLEKK
Sbjct: 79  QVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEMLLEKK 135

[Close]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Match: W9RBN2_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_013159 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.500e-25
Identity = 63/107 (58.88%), Postives = 89/107 (83.18%), Query Frame = 1

		  
Query: 40  SIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKL 99
           +IVS+ W K+ FP+L TSR R    AAK +T++KVCDIV+++LAL A+  +T +S+FS L
Sbjct: 32  TIVSMSWAKNGFPSLRTSRFR-VSCAAKPQTVEKVCDIVRKQLALPAETELTPESKFSAL 91

Query: 100 GADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           GADSLDTVEIVM+LEEEFGINV+E+ +++I+T+Q+AAD+IE L++ K
Sbjct: 92  GADSLDTVEIVMSLEEEFGINVEEESSENITTVQEAADLIEKLVQSK 137

[Close]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Match: A0A059BDY2_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_G01960 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.400e-25
Identity = 61/106 (57.55%), Postives = 87/106 (82.08%), Query Frame = 1

		  
Query: 41  IVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLG 100
           +VSL W K+ FP+L +SR R   + AK ET+DKVC+IV+++LAL A+  +T +S+FS +G
Sbjct: 29  VVSLGWRKNGFPSLRSSRFRVSCAQAKPETVDKVCEIVRKQLALPAEAELTPESKFSAIG 88

Query: 101 ADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           ADSLDTVEIVM LEEEF I+V+E+ +Q+I+T+Q+AAD+IE L++KK
Sbjct: 89  ADSLDTVEIVMALEEEFDISVEEESSQNITTVQEAADLIEKLVQKK 134

[Close]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Match: A0A166H6H5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002438 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.600e-24
Identity = 67/114 (58.77%), Postives = 85/114 (74.56%), Query Frame = 1

		  
Query: 36  GRCSSIVSLDWGKSSFPTL---GTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTA 95
           G   + VSL     SFP+L     SRR     AAK ET+DKVC+IV+++LA+  DV VT 
Sbjct: 22  GLAKNSVSLSINGKSFPSLRLQAASRRFRVSCAAKPETVDKVCEIVRKQLAIQPDVAVTG 81

Query: 96  DSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           DS+F+ LGADSLDTVEIVM LEEEFGI+V+E+ AQ I+T+Q AAD+IE+L+EKK
Sbjct: 82  DSKFAALGADSLDTVEIVMGLEEEFGISVEEESAQTIATVQDAADLIENLVEKK 135

[Close]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Match: ACP1_SPIOL (Acyl carrier protein 1, chloroplastic OS=Spinacia oleracea GN=ACL1.1 PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 1.800e-53
Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 1

		  
Query: 29  HHPWRGNGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 88
           H   +GNGRCSSIV LDWGKSSFPTL TSRRRSFISAAKKETIDKVCDIVKEKLALGADV
Sbjct: 20  HKLSQGNGRCSSIVCLDWGKSSFPTLRTSRRRSFISAAKKETIDKVCDIVKEKLALGADV 79

Query: 89  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK
Sbjct: 80  VVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 137

[Close]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.900e-24
Identity = 62/100 (62.00%), Postives = 75/100 (75.00%), Query Frame = 1

		  
Query: 47  GKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDT 106
           GKS  P    S R     AAK ET++KVC IVK++LAL  D  VT +S+F+ LGADSLDT
Sbjct: 35  GKSFAPLRMRSARFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDT 94

Query: 107 VEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           VEIVM LEEEFGINV+E+ AQ I+T+Q AAD+IE L+EKK
Sbjct: 95  VEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKK 134

[Close]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Match: ACP4_ARATH (Acyl carrier protein 4, chloroplastic OS=Arabidopsis thaliana GN=ACP4 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.500e-23
Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 1

		  
Query: 37  RCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEF 96
           + SS  S+ +G+  F +   S R     AAK ET+ KV DIVKE+LAL ADV +TA+S+F
Sbjct: 24  KASSSQSVTFGR--FTSSTKSLRLQISCAAKAETVQKVSDIVKEQLALAADVPLTAESKF 83

Query: 97  SKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           S LGADSLDTVEIVM LEE+F I+V+E  AQ+I+TIQ+AAD+IE L++KK
Sbjct: 84  SALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQEAADLIEDLVQKK 131

[Close]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.400e-23
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 1

		  
Query: 36  GRCSSI--VSLDWGKSSFPTLGTSRRRSFISA---AKKETIDKVCDIVKEKLALGADVVV 95
           GR SS+  VSL   + SFP+L +S+    +     AK ET+ KVC IVK++LAL  D  V
Sbjct: 23  GRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEV 82

Query: 96  TADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
              S+FS LGADSLDTVEIVM LEEEFGI+V+E+ AQ I T+Q AAD+IE L+EKK
Sbjct: 83  NGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138

[Close]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.600e-23
Identity = 68/116 (58.62%), Postives = 83/116 (71.55%), Query Frame = 1

		  
Query: 36  GRCSSI--VSLDWGKSSFPTLGTSRRRSFISA---AKKETIDKVCDIVKEKLALGADVVV 95
           GR SS+  VSL   + SFP+L +S+  SF      AK ET+ KVC IVK++LAL  D  V
Sbjct: 23  GRISSLRSVSLPVSRKSFPSLRSSKG-SFARVSCQAKPETVAKVCRIVKKQLALPDDSEV 82

Query: 96  TADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
              S+FS LGADSLDTVEIVM LEEEFGI+V+E+ AQ I T+Q AAD+IE L+EKK
Sbjct: 83  NGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137

[Close]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Match: AT4G25050.2 (acyl carrier protein 4)

HSP 1 Score: 101.7 bits (252), Expect = 4.000e-22
Identity = 64/122 (52.46%), Postives = 83/122 (68.03%), Query Frame = 1

		  
Query: 37  RCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEF 96
           + SS  S+ +G+  F +   S R     AAK ET+ KV DIVKE+LAL ADV +TA+S+F
Sbjct: 24  KASSSQSVTFGR--FTSSTKSLRLQISCAAKAETVQKVSDIVKEQLALAADVPLTAESKF 83

Query: 97  SKLGADSLDT------------VEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLE 147
           S LGADSLDT            VEIVM LEE+F I+V+E  AQ+I+TIQ+AAD+IE L++
Sbjct: 84  SALGADSLDTVCYTLSVSYHCHVEIVMALEEKFNISVEESDAQNITTIQEAADLIEDLVQ 143

[Close]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-20
Identity = 53/90 (58.89%), Postives = 71/90 (78.89%), Query Frame = 1

		  
Query: 57  SRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEE 116
           SRR S   AAK+ETI+KV  IVK++L+L  D  V A+++F+ LGADSLDTVEIVM LEEE
Sbjct: 47  SRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEE 106

Query: 117 FGINVDEDKAQDISTIQQAADVIESLLEKK 147
           F I + E+KAQ I+T++QAA++IE L+ +K
Sbjct: 107 FNIQMAEEKAQKIATVEQAAELIEELINEK 136

[Close]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Match: AT5G27200.1 (acyl carrier protein 5)

HSP 1 Score: 94.7 bits (234), Expect = 4.900e-20
Identity = 48/82 (58.54%), Postives = 71/82 (86.59%), Query Frame = 1

		  
Query: 65  AAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDED 124
           A K+ET++KV +IVK++L+L  D  VTA ++F++LGADSLDTVEIVM LEEEFGI + E+
Sbjct: 56  AVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGITMAEE 115

Query: 125 KAQDISTIQQAADVIESLLEKK 147
           +A++I+T+QQAA++IE L+++K
Sbjct: 116 RAKEIATVQQAAELIEELVQEK 137

[Close]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Match: AT1G54580.1 (acyl carrier protein 2)

HSP 1 Score: 93.6 bits (231), Expect = 1.100e-19
Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 1

		  
Query: 35  NGRCSSIVSLDWGKSSFPTLGTSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADS 94
           NGR SS   L +     PT     R +   AAK ET+DKVC +V+++L+L     +TA +
Sbjct: 31  NGRRSS---LSFNLRQLPT-----RLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAAT 90

Query: 95  EFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIESLLEKK 147
           +F+ LGADSLDTVEIVM LEEEFGI + E+KAQ I+T++QAA +IE LL +K
Sbjct: 91  KFAALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEELLFEK 134

[Close]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Match: AT1G54630.1 (acyl carrier protein 3)

HSP 1 Score: 92.0 bits (227), Expect = 3.200e-19
Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 1

		  
Query: 59  RRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFG 118
           R +   AAK ET+DKVC +V+++L+L     +TA ++F+ LGADSLDTVEIVM LEEEFG
Sbjct: 47  RLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFG 106

Query: 119 INVDEDKAQDISTIQQAADVIESLLEKK 147
           I + E+KAQ I+T++QAA +IE LL +K
Sbjct: 107 IEMAEEKAQSIATVEQAAALIEELLLEK 134

The following BLAST results are available for this feature:

BLAST of Spo19305.1 vs. NCBI nr
BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
BLAST of Spo19305.1 vs. TAIR (Arabidopsis)

BLAST of Spo19305.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902230236\|gb\|KNA21773.1\|	1.0e-51	98.2	hypothetical protein SOVF_0399...	[more]
gi\|113166\|sp\|P07854.2\|ACP1_SPIOL	3.0e-51	94.9	RecName: Full=Acyl carrier pro...	[more]
gi\|170096\|gb\|AAA34023.1\|	3.0e-51	94.9	acyl carrier protein I precurs...	[more]
gi\|731334673\|ref\|XP_010678339.1\|	1.1e-42	83.9	PREDICTED: acyl carrier protei...	[more]
gi\|99031841\|pdb\|2AVA\|A	1.2e-31	97.5	Chain A, Solution Structure Of...	[more]

BLAST of Spo19305.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RQL5_SPIOL	7.1e-52	98.2	Acyl carrier protein OS=Spinac...	[more]
A0A0J8CFK5_BETVU	7.8e-43	83.9	Acyl carrier protein OS=Beta v...	[more]
W9RBN2_9ROSA	1.5e-25	58.8	Acyl carrier protein OS=Morus ...	[more]
A0A059BDY2_EUCGR	7.4e-25	57.5	Acyl carrier protein OS=Eucaly...	[more]
A0A166H6H5_DAUCA	1.6e-24	58.7	Uncharacterized protein OS=Dau...	[more]

BLAST of Spo19305.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
ACP1_SPIOL	1.8e-53	94.9	Acyl carrier protein 1, chloro...	[more]
ACP1_CASGL	6.9e-24	62.0	Acyl carrier protein 1, chloro...	[more]
ACP4_ARATH	1.5e-23	58.1	Acyl carrier protein 4, chloro...	[more]
ACP1_CUPLA	4.4e-23	56.9	Acyl carrier protein 1, chloro...	[more]
ACP4_CUPLA	7.6e-23	58.6	Acyl carrier protein 4, chloro...	[more]

BLAST of Spo19305.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G25050.2	4.0e-22	52.4	acyl carrier protein 4	[more]
AT3G05020.1	1.7e-20	58.8	acyl carrier protein 1	[more]
AT5G27200.1	4.9e-20	58.5	acyl carrier protein 5	[more]
AT1G54580.1	1.1e-19	51.7	acyl carrier protein 2	[more]
AT1G54630.1	3.2e-19	56.8	acyl carrier protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 100..141 score: 2.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 69..143 score: 16
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 68..141 score: 1.2
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 98..113 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	1.10.1200.10		coord: 61..145 score: 2.7
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 72..138 score: 2.2
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 70..140 score:
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 67..143 score: 7.07
IPR020806	Polyketide synthase, phosphopantetheine-binding domain	SMART	SM00823	PKS_PP	coord: 71..143 score: 0.
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 57..146 score: 6.0
None	No IPR available	PANTHER	PTHR20863:SF29	ACYL CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 57..146 score: 6.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006096	glycolytic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0009595	detection of biotic stimulus
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006306	DNA methylation
biological_process	GO:0000737	DNA catabolic process, endonucleolytic
biological_process	GO:0006285	base-excision repair, AP site formation
biological_process	GO:0019872	streptomycin biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006021	inositol biosynthetic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0009409	response to cold
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0009636	response to toxic substance
biological_process	GO:0010583	response to cyclopentenone
biological_process	GO:0010731	protein glutathionylation
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0005986	sucrose biosynthetic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0043900	regulation of multi-organism process
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0019253	reductive pentose-phosphate cycle
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0009657	plastid organization
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0046854	phosphatidylinositol phosphorylation
biological_process	GO:0006396	RNA processing
biological_process	GO:0009642	response to light intensity
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0007389	pattern specification process
biological_process	GO:0048653	anther development
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006412	translation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006508	proteolysis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006431	methionyl-tRNA aminoacylation
biological_process	GO:0006555	methionine metabolic process
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0009987	cellular process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009735	response to cytokinin
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0048046	apoplast
cellular_component	GO:0042646	plastid nucleoid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0045174	glutathione dehydrogenase (ascorbate) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0050278	sedoheptulose-bisphosphatase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity
molecular_function	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function	GO:0004825	methionine-tRNA ligase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0008934	inositol monophosphate 1-phosphatase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0052832	inositol monophosphate 3-phosphatase activity
molecular_function	GO:0052833	inositol monophosphate 4-phosphatase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0004364	glutathione transferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05708	1.00	Barchart \| Table
Spo09460	0.78	Barchart \| Table
Spo19407	0.77	Barchart \| Table
Spo14757	0.75	Barchart \| Table
Spo12379	0.75	Barchart \| Table
Spo21716	0.75	Barchart \| Table
Spo15244	0.75	Barchart \| Table
Spo23874	0.73	Barchart \| Table
Spo25503	0.73	Barchart \| Table
Spo23921	0.73	Barchart \| Table
Spo10820	0.73	Barchart \| Table
Spo03006	0.71	Barchart \| Table
Spo00754	0.70	Barchart \| Table
Spo13428	0.70	Barchart \| Table
Spo24420	0.69	Barchart \| Table
Spo04387	0.68	Barchart \| Table
Spo01967	0.68	Barchart \| Table
Spo23505	0.68	Barchart \| Table
Spo00538	0.68	Barchart \| Table
Spo21827	0.67	Barchart \| Table
Spo10817	0.67	Barchart \| Table
Spo15343	0.66	Barchart \| Table
Spo06101	0.66	Barchart \| Table
Spo06508	0.66	Barchart \| Table
Spo13061	0.66	Barchart \| Table
Spo16559	0.66	Barchart \| Table
Spo17047	0.66	Barchart \| Table
Spo17151	0.66	Barchart \| Table
Spo18266	0.66	Barchart \| Table
Spo25003	0.66	Barchart \| Table
Spo25111	0.66	Barchart \| Table
Spo10623	0.65	Barchart \| Table
Spo09321	0.65	Barchart \| Table
Spo28041	0.65	Barchart \| Table
Spo23829	0.65	Barchart \| Table
Spo17619	0.65	Barchart \| Table