Spo16266 (gene)

Overview
NameSpo16266
Typegene
OrganismSpinacia oleracea (Spinach)
Description30S ribosomal protein S7, chloroplastic
LocationSpoScf_05165 : 4873 .. 5364 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCCGGAGCTGCTTCCAATTGCTCGGAAATTCTCAGTTATATGGGGGGCTTAGATAGTGAGCAAAAACAATTGATCAAGAAATTGGTAAACTTTCACATGAAAGAAGGTAAAAGAACGAAGGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCGAACTGAAGGCGATGTAATCAAACTTATGGTTGACGCCGTGGAGAATATAAAGCCCATATGCAAAGTAGAAAAAGTAAGAGTAGCAGGTACTATTTATGATGTCCCCGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATATCCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTTCGCGTAAGAAAAGGGAGAATCTTCATGGACTGGCTTCCGCCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

mRNA sequence

ATGGGTGCCGGAGCTGCTTCCAATTGCTCGGAAATTCTCAGTTATATGGGGGGCTTAGATAGTGAGCAAAAACAATTGATCAAGAAATTGGTAAACTTTCACATGAAAGAAGGTAAAAGAACGAAGGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCGAACTGAAGGCGATGTAATCAAACTTATGGTTGACGCCGTGGAGAATATAAAGCCCATATGCAAAGTAGAAAAAGTAAGAGTAGCAGGTACTATTTATGATGTCCCCGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATATCCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTTCGCGTAAGAAAAGGGAGAATCTTCATGGACTGGCTTCCGCCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Coding sequence (CDS)

ATGGGTGCCGGAGCTGCTTCCAATTGCTCGGAAATTCTCAGTTATATGGGGGGCTTAGATAGTGAGCAAAAACAATTGATCAAGAAATTGGTAAACTTTCACATGAAAGAAGGTAAAAGAACGAAGGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCGAACTGAAGGCGATGTAATCAAACTTATGGTTGACGCCGTGGAGAATATAAAGCCCATATGCAAAGTAGAAAAAGTAAGAGTAGCAGGTACTATTTATGATGTCCCCGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATATCCTACAGGATAAGCTTAGAGAAATGTTCATTTGATGAGATACTGGATGCTTACCGAAAGAGGGGAATTTCGCGTAAGAAAAGGGAGAATCTTCATGGACTGGCTTCCGCCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Protein sequence

MGAGAASNCSEILSYMGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPICKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYRKRGISRKKRENLHGLASANRSFAHFRWW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16266.1Spo16266.1mRNA


Homology
[Close]
BLAST of Spo16266.1 vs. NCBI nr
Match: gi|54606711|dbj|BAD66734.1| (ribosomal protein S7 (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 294.7 bits (753), Expect = 1.000e-76
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. NCBI nr
Match: gi|162279925|ref|NP_064059.2| (rps7 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 288.5 bits (737), Expect = 7.300e-75
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR ARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. NCBI nr
Match: gi|927682212|gb|ALE29224.1| (ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 277.7 bits (709), Expect = 1.300e-71
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGI+RKKRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. NCBI nr
Match: gi|849123226|ref|YP_009153930.1| (ribosomal protein S7 (mitochondrion) [Gossypium hirsutum])

HSP 1 Score: 274.2 bits (700), Expect = 1.400e-70
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLD EQKQLIKKLVNF MKEGKRT+VRAI YQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIFYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+VEKVR+AGTIYDVPGIVA+DRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVEKVRIAGTIYDVPGIVAKDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGI+RKKRENLHGL+S NRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLSSTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. NCBI nr
Match: gi|939575832|ref|YP_009173837.1| (ribosomal protein S7 (mitochondrion) [Populus tremula])

HSP 1 Score: 273.5 bits (698), Expect = 2.400e-70
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MG LD EQKQLIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDA+ENIKPI
Sbjct: 1   MGSLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAIENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGI+RKKRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Match: Q5U6D2_BETVU (Ribosomal protein S7 OS=Beta vulgaris subsp. vulgaris GN=rps7 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 7.100e-77
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Match: G2XLN3_BETMA (Ribosomal protein S7 OS=Beta macrocarpa GN=rps7 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.100e-75
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR ARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Match: E6ZE69_BETVM (Ribosomal protein S7 OS=Beta vulgaris subsp. maritima GN=rps7 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.100e-75
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR ARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Match: A0A0M4MPL4_9MAGN (Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 9.000e-72
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGI+RKKRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Match: A0A0N7D4B5_GOSBA (Ribosomal protein S7 OS=Gossypium barbadense GN=rps7 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 9.900e-71
Identity = 136/148 (91.89%), Postives = 142/148 (95.95%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLD EQKQLIKKLVNF MKEGKRT+VRAI YQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIFYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+VEKVR+AGTIYDVPGIVA+DRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVEKVRIAGTIYDVPGIVAKDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGI+RKKRENLHGL+S NRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLSSTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 4.600e-77
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR ARTEGDVIKLM+DAVENIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FDEILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRKKRENLHGLASANRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.400e-70
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLD EQK LIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+V KV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRG +R+KRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.300e-67
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MG  D EQK+LIKKLVNF M +GKRT+VRAIVY+TFHR ARTE DVIKLMVDAV+NIKPI
Sbjct: 1   MGDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+V KV VAGTIYDVPGIVARDRQQTLAIRWIL AAFKRRISYRISLEKCSF EILDAYR
Sbjct: 61  CEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRGISRK+RENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGISRKRRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 9.900e-48
Identity = 96/157 (61.15%), Postives = 130/157 (82.80%), Query Frame = 1 

		  

Query: 8   NCSEILSYMGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVD 67
           NCS+ L Y+ GL+ +QKQLIKKLV+  M +GK+T+ RAIVY+TFHR A   GDVIKL+V+
Sbjct: 75  NCSDNLGYIRGLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLA-PHGDVIKLLVN 134

Query: 68  AVENIKPICKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYR-ISLEKCS 127
           A+EN+KPIC+V+KVR++GT   VP I+A +RQ+TLAIRW+LE+A KRR+  + ISL++C 
Sbjct: 135 AIENVKPICEVKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCL 194

Query: 128 FDEILDAYRKRGISRKKRENLHGLASANRSFAHFRWW 164
           + EIL+A +K GI+RKKR++LH LA ANRSF+H+RWW
Sbjct: 195 YAEILEASQKMGIARKKRDDLHKLAEANRSFSHYRWW 230
[Close]
BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Match: RS7_PERMH (30S ribosomal protein S7 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rpsG PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.400e-22
Identity = 57/138 (41.30%), Postives = 84/138 (60.87%), Query Frame = 1 

		  

Query: 26  LIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGD-VIKLMVDAVENIKPICKVEKVRVA 85
           L+ KL+N  MK+GK++K   IVY      A   GD  +  +  A+ENIKP+ +V   RV 
Sbjct: 22  LVHKLINKVMKDGKKSKAEKIVYTAMKNLAEKTGDDPLTALHKAIENIKPVLEVRPRRVG 81

Query: 86  GTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYRKRGISRKKR 145
           G+ Y VP  V   RQ +LA+RW++EAA  R      ++ +   +E+ DAY  RG + KK+
Sbjct: 82  GSTYQVPMEVPPRRQISLALRWLVEAARNRSGKGNYTMIEKLTNELFDAYNNRGAAVKKK 141

Query: 146 ENLHGLASANRSFAHFRW 163
           E+ H +A AN++FAH+RW
Sbjct: 142 EDTHRMAEANKAFAHYRW 159
[Close]
BLAST of Spo16266.1 vs. TAIR (Arabidopsis)
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 266.2 bits (679), Expect = 1.400e-71
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLD EQK LIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+V KV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRG +R+KRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. TAIR (Arabidopsis)
Match: ATMG01270.1 (mitochondrial ribosomal protein S7)

HSP 1 Score: 266.2 bits (679), Expect = 1.400e-71
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 1 

		  

Query: 16  MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRPARTEGDVIKLMVDAVENIKPI 75
           MGGLD EQK LIKKLVNF MKEGKRT+VRAIVYQTFHRPARTE DVIKLMVDAVENIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 76  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFDEILDAYR 135
           C+V KV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSF EILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 136 KRGISRKKRENLHGLASANRSFAHFRWW 164
           KRG +R+KRENLHGLAS NRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148
[Close]
BLAST of Spo16266.1 vs. TAIR (Arabidopsis)
Match: ATCG01240.1 (ribosomal protein S7)

HSP 1 Score: 75.1 bits (183), Expect = 4.500e-14
Identity = 45/143 (31.47%), Postives = 82/143 (57.34%), Query Frame = 1 

		  

Query: 23  QKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR-PARTEGDVIKLMVDAVENIKPICKVEKV 82
           + +L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 83  RVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFDEILDAYRKRG 142
           RV G+ + VP  +   + + LAIRW+L A+ KR    +++++S       E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 143 ISRKKRENLHGLASANRSFAHFR 162
            + +K+E  H +A ANR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155
[Close]
BLAST of Spo16266.1 vs. TAIR (Arabidopsis)
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 75.1 bits (183), Expect = 4.500e-14
Identity = 45/143 (31.47%), Postives = 82/143 (57.34%), Query Frame = 1 

		  

Query: 23  QKQLIKKLVNFHMKEGKRTKVRAIVYQTFHR-PARTEGDVIKLMVDAVENIKPICKVEKV 82
           + +L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 83  RVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFDEILDAYRKRG 142
           RV G+ + VP  +   + + LAIRW+L A+ KR    +++++S       E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 143 ISRKKRENLHGLASANRSFAHFR 162
            + +K+E  H +A ANR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155
The following BLAST results are available for this feature:
BLAST of Spo16266.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|54606711|dbj|BAD66734.1|1.0e-7699.3ribosomal protein S7 (mitochon... [more]
gi|162279925|ref|NP_064059.2|7.3e-7597.9rps7 gene product (mitochondri... [more]
gi|927682212|gb|ALE29224.1|1.3e-7194.5ribosomal protein S7 (mitochon... [more]
gi|849123226|ref|YP_009153930.1|1.4e-7091.8ribosomal protein S7 (mitochon... [more]
gi|939575832|ref|YP_009173837.1|2.4e-7092.5ribosomal protein S7 (mitochon... [more]
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BLAST of Spo16266.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q5U6D2_BETVU7.1e-7799.3Ribosomal protein S7 OS=Beta v... [more]
G2XLN3_BETMA5.1e-7597.9Ribosomal protein S7 OS=Beta m... [more]
E6ZE69_BETVM5.1e-7597.9Ribosomal protein S7 OS=Beta v... [more]
A0A0M4MPL4_9MAGN9.0e-7294.5Ribosomal protein S7 OS=Heuche... [more]
A0A0N7D4B5_GOSBA9.9e-7191.8Ribosomal protein S7 OS=Gossyp... [more]
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BLAST of Spo16266.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RT07_BETVU4.6e-7797.9Ribosomal protein S7, mitochon... [more]
RT07_ARATH2.4e-7090.5Ribosomal protein S7, mitochon... [more]
RT07_WHEAT7.3e-6787.1Ribosomal protein S7, mitochon... [more]
RT07_MARPO9.9e-4861.1Ribosomal protein S7, mitochon... [more]
RS7_PERMH9.4e-2241.330S ribosomal protein S7 OS=Pe... [more]
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BLAST of Spo16266.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G07696.11.4e-7190.5Ribosomal protein S7p/S5e fami... [more]
ATMG01270.11.4e-7190.5mitochondrial ribosomal protei... [more]
ATCG01240.14.5e-1431.4ribosomal protein S7[more]
ATCG00900.14.5e-1431.4Ribosomal protein S7p/S5e fami... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 9..163
score: 4.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 10..162
score: 4.0E
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMsTIGR01029TIGR01029coord: 22..162
score: 1.8
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 24..50
scor
IPR023798Ribosomal protein S7 domainGENE3D1.10.455.10coord: 21..162
score: 2.3
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 23..155
score: 8.8
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 23..162
score: 3.01
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 10..162
score: 4.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0015979 photosynthesis
biological_process GO:0050789 regulation of biological process
biological_process GO:0009987 cellular process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009769 photosynthesis, light harvesting in photosystem II
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0010207 photosystem II assembly
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006412 translation
cellular_component GO:0010287 plastoglobule
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0000312 plastid small ribosomal subunit
cellular_component GO:0005763 mitochondrial small ribosomal subunit
cellular_component GO:0009507 chloroplast
cellular_component GO:0009522 photosystem I
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0000287 magnesium ion binding
RNA-Seq Expression