Spo15009 (gene)

Overview
NameSpo15009
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_06375 : 1199 .. 4141 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTCTCAAAAAACTCTCATGCTAAAAAAATTCCAGAAAAAAGACCGAGGCTCAAAAAATTGTTCTCAAAATCAAGATATTCAATTTTTCGCTCTTTCCCTTGAGGCGTCGATCTAGGGTTCCTACATCTTCACATAAAAATTCATTTGTTGCTGATGTCTATTCGATTAAACAGGTAAGCTTTCGATCTTTCCCCAATTGTTTGGTAATTTTGTTCTATGTGGAGTGATTTTTTAGAAATTAAATTGGGTATTGCTTAAAAAATCGTCTAAATAGTCTTGATTAATAGGTAATCACACTGAATTTGGTATAACTTGTACAATTTCCTGGTGCTTGTTTTAATTAAACGGAATAAATTTTTCCTTCTTTTGGTGAATGAATTCGATTGTGAAGTTCAAGTCTTGTTTGATTTTGTTGGGTGTTTCTTAGTTTCAAGTAGTAATGCTTATTTTCTGATTGATTTCAACAAGGGTATAAATATACAATGTAATAAACCAAGGATTTTGTGGAAAGAATTGTAGATTTACCGAAAAAGATGAATGAAATCTTTTTCCCAAAGAGGTTTGCCTACCCTAATCAATCGAAATAATTATCAAATATATCAGTTACTGATTCAAAACGTACAGTTAACATGTCTGGCTTCACATCTCTGTCATGGTTGATAGTATATGATTTGCAACTTCCTTCTTTGCACTAAATTATCACTCATTCCATATTTTTGTTTCTGCATCACCACAGTTGGATTAGTGAGTAAGCCCACCAATGAGTTATGAGGAAATAATGTGATTTTCAGCAGCTAACCCTCTACTTCTCATAATTAATGCTAATACAGGAGGGATCTTGCATTTTATCTTATGTAGCAATGTAGTTACTCTCTGACCCAATATTTTCATGTACTCATAACTAGTGCAATACTAGTACGCAATTATTCATATGGCGAATCAAAATCTACCTAGCTTAAAGTGGGTTGTAAAAACTATACAGCTCCATATAGATTTCTAAGAGATCCTTATATCTAGAAGGTATATATCCGTTCACCTTAGAAAATACAATTAGCATCTGAAAAGGCTTAAATGATAAGTAAAGTTCTATCAGGTATATGAATTGGTAGACATGCTACTTGTATATTGTAAGCAAGTTTTTGTTTTCTGATCTTTATTATACTTCTAATTGCTAAAACGTGTTTATTTTAAACATATCCACGATCAATACTATCTCTCCTATTCCCAATTACCACTCTCACAACTCCTTTAAGTATCCCTTTCTTTTGAAGCACCAAGTTAGCTTTTGTACATACTAGTGTACTACCCACCAGTTCTTGACGGATTTACTATATCCATCAACTTCCTCATACCAACATAATACATAATGAACTGTTTCTAACTATGTTATTGATTGCATCCGATAGTGAGTCTACGGACCAGAGACATACTAGAAAAATGTTTAATTTGTTTTCCCTAATTCATTTTTAATTCTTGAAGTGTGTAGTTCAAAGACACCTTATAGACTTACTTTACATGGGAAATTTTAATATGTCTGAATATAATTAATATGGAAGACAAAATGTTTAAATTGTACTCCTTATATGTTAATGAAATTCAATTTAAATAAAGTTTAATTTCTTATAAGCTAGTACACTGTAATTATAAAATTGAAGGTGATTTAGGATGAGGAGACTGATGATTAGAATGATGAGCATAGTCTAGGGTTTTTTTCTCATTTAATTCCATGTAAGTTTAACACTATACCGTGTTTTAACTATTTTTTTAAAGAAAAATTAGTATGTTCAGCAACAAAGTAGCCCCTTCCCCCCTCCCGCTGAATCAGCAACACATTCATCATATGCTTCAGGCCCTGTGTCAGTGTGTGCATAAGTTCCATCAACCAACGTCAAAGGCAAAGCATATGATCTGGTTAACCTGTACTTTCTGGCTATTTATAAGGAAATATGTATAATAATTTCAGCAGTCATCTGTTCACGTAGCAATGTTTTGTGTAGAACCATTGGTTTTGAAAAAGGTGTTCTCTGGATGGCATGAATGAGGGACAAATATCCAAGGCTCTCGAGGATCTTGTGAAAGCCGGGGAAGAACTTAAAGTTGGAGATGTTCAGCAGTTGGACTCCTTTAAAATGAACCCAACTGTCCGCCAGTTTGCTTCTTTTCTTCAGTCATACTTAATAGAGTGAATTGCACTTTGGTCTGTCTTTTTTTTTTCCATGTATCATCTGAATGAATTAGCATTTTTCCTCTGCGATATTGATAAACAGCACAAGGGAATTATGCAATAGTCGCTGTGAAACTGTGGCCTCTTTCACCTTGCTGTAGTAATCATCAGAGAAATTCACTTGTTATTTGGGCCTTGTTTAGCTATTTTAAGCCACACTACATATTTGCAGCCCACTACTATCACAAGCTCGCTAAAGCTGGAAGAGCTTAAGGAACGAAGTATTGAGTTGAAAATAGTCGTGTTCCTAGTTTCCTACTTACCATTTTTTTGTTAGAGGTTAATCCAAACTGGATGAAATTTTATAAAACGTCAAAGCTAGTGTGCCCCATGCATCAGTCCCTACATCGTCTTCTAAGATAACAACACAATTATCTTTTGCTTCCTTGATTAACTATTGTCTTTTTTCTTTATTAATGACTGTTCTTTTATGGCTAGAACGGAGAAACTGTAATTTCATCTGATTGATACTACAGATACCAACAACCCTTCATCTGTGTTTTCAGATGCACACAACTCTTTTCTGTAAAGGCATGAGGGAATTGGAAGCGGCCTGCGAATACTCGAAAGCAAAAAACTGACGGCTTCTAATATGTTTTCTCTGAATTAAGAAAAAATCTACATTTTTTACCCAGGTTGTTGAGTCATGAAGATGCACCATTGAAGCTATGTTTGGCCGAAGATTCATCAATTACTTAGAATTGACAGCCGGCGAA

mRNA sequence

TTCCTCTCAAAAAACTCTCATGCTAAAAAAATTCCAGAAAAAAGACCGAGGCTCAAAAAATTGTTCTCAAAATCAAGATATTCAATTTTTCGCTCTTTCCCTTGAGGCGTCGATCTAGGGTTCCTACATCTTCACATAAAAATTCATTTGTTGCTGATGTCTATTCGATTAAACAGGTGTTCTCTGGATGGCATGAATGAGGGACAAATATCCAAGGCTCTCGAGGATCTTGTGAAAGCCGGGGAAGAACTTAAAGTTGGAGATGTTCAGCAGTTGGACTCCTTTAAAATGAACCCAACTGTCCGCCAATGCACCATTGAAGCTATGTTTGGCCGAAGATTCATCAATTACTTAGAATTGACAGCCGGCGAA

Coding sequence (CDS)

ATGTCTATTCGATTAAACAGGTGTTCTCTGGATGGCATGAATGAGGGACAAATATCCAAGGCTCTCGAGGATCTTGTGAAAGCCGGGGAAGAACTTAAAGTTGGAGATGTTCAGCAGTTGGACTCCTTTAAAATGAACCCAACTGTCCGCCAATGCACCATTGAAGCTATGTTTGGCCGAAGATTCATCAATTACTTAGAATTGACAGCCGGCGAA

Protein sequence

MSIRLNRCSLDGMNEGQISKALEDLVKAGEELKVGDVQQLDSFKMNPTVRQCTIEAMFGRRFINYLELTAGE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15009.1Spo15009.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15009.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15009.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15009.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15009.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression
Gener valueExpression
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Spo282670.66Barchart | Table